FEMS Microbiology Letters 173 (1999) 359^364 Lipids and fatty acids of Burkholderia and Ralstonia species Lesley Galbraith, Martina H. Jonsson, L. Charlotta Rudhe, Stephen G. Wilkinson * Department of Chemistry, University of Hull, Hull HU6 7RX, UK Received 15 December 1998; accepted 20 January 1999 Abstract Contrary to previous reports, ornithine amide lipids are produced by some strains of Ralstonia eutropha and Ralstonia pickettii under some growth conditions, thus eroding one of the characteristic differences from Burkholderia spp. The proportion of phosphatidylethanolamine containing 2-hydroxy acids also varies with growth conditions, but not significantly with growth temperature (30 or 37³C) for shake-flask cultures, unlike chemostat cultures of Burkholderia cepacia. Several fatty acid profiles were represented among the isolated lipopolysaccharides (LPS). Burkholderia spp. typically had 14:0, 3-OH-14:0 and 3-OH-16:0 as major components, but in two strains of B. cepacia the LPS was relatively rich in 12:0 (rather than 14:0) or contained 2-OH-14:0 (but little 3-OH-16:0). In two strains each of R. eutropha and R. pickettii, the LPS contained mainly 14:0 and 3-OH-14:0 with some 2-OH-14:0. In another strain of R. pickettii the LPS contained 2-OH-16:0 but not 2-OH-14:0. The data may have chemotaxonomic potential. z 1999 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved. Keywords : Burkholderia ; Ralstonia; Fatty acid; Lipopolysaccharide; Lipid 1. Introduction Species in the genera Burkholderia and Ralstonia characteristically produce two forms of phosphatidylethanolamine (PE), di¡erentiated by the absence (PE1) or presence (PE2) of 2-hydroxy fatty acids [1^5]. In addition, Burkholderia spp. produce two comparable forms of ornithine amide lipid (OL) in which an amide-bound 3-hydroxy acid is itself esteri¢ed by a non-hydroxy acid (OL1) or a 2-hydroxy acid (OL2) [2^6]. The two types of zwitterionic lipid * Corresponding author. Tel.: +44 (1482) 46 5484; Fax: +44 (1482) 46 6410; E-mail: [email protected] (PE and OL) appear to be functionally interchangeable in at least some bacteria [7^9]. Lipid pro¢les have been used extensively in bacterial chemotaxonomy and the analysis of component fatty acids is a popular method for the rapid, computer-assisted identi¢cation of strains. Hydroxy acids, normally derived from lipopolysaccharide (LPS) in Gram-negative bacteria, are of particular diagnostic value [10,11]. However, the existence of other sources of hydroxy acids (such as PE2 and OL) can mask signi¢cant LPS-based di¡erences in cellular fatty acids, and growth of organisms under controlled, de¢ned conditions may be necessary to avoid complications from phenotypic variation [12]. This study was carried out to clarify these issues for Ralstonia eutropha and R. pickettii (for which no 0378-1097 / 99 / $20.00 ß 1999 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved. PII: S 0 3 7 8 - 1 0 9 7 ( 9 9 ) 0 0 0 9 8 - 1 FEMSLE 8695 25-3-99 360 L. Galbraith et al. / FEMS Microbiology Letters 173 (1999) 359^364 direct data on LPS fatty acids were available) and to permit comparisons with R. solanacearum and Burkholderia spp. 2. Materials and methods 2.1. Bacteria, growth conditions, and preparation of cell walls Batch fermenter cultures of the following strains were grown in nutrient broth CM67 (Oxoid, 20 l) with aeration at 20 l min31 and stirring at 300 rev min31 : Burkholderia cepacia CIP 8236, B. cocovenenans LMG 11626, B. gladioli pv. agaricicola NCPPB 3580, B. glumae LMG 1277, R. eutropha NCIMB 40529, R. eutropha NCIMB 11842, R. pickettii A93/71 (all 24 h at 30³C); B. plantarii LMG 10908 (30 h at 30³C); B. vandii LMG 16020 (40 h at 30³C); B. cepacia CDC 86, B. cepacia CIP 8238, B. vietnamiensis LMG 6998, B. vietnamiensis LMG 6999, B. vietnamiensis LMG 10926 (all 24 h at 34³C); R. pickettii CL468/83, CL391/83, CL348/84 and T104/72 (all 24 h at 37³C) ; B. gladioli pv. gladioli NCPPB 1891 (27 h at 37³C). In all cases the cells were disintegrated (Dyno Mill KDL) and the wall fractions were puri¢ed and freeze-dried. Both R. eutropha strains and R. pickettii strain A93/71 were also grown as shake-£ask cultures (1 l) for 17 h at 30 or 37³C and the washed cells were freeze-dried. Strain 34, an arabinose-utilising environmental strain of B. pseudomallei provisionally designated B. thailandensis [13], was grown on tryptone soy agar (48 h at 37³C), cells were harvested in 0.4% formol, heated (1 h at 100³C), and acetone-dried. 2.2. Extraction of lipids and LPS Lipids were extracted from dried cells or cell walls by stirring them with chloroform/methanol (2:1, v/v) for 2 h at room temperature. When necessary, polyL-hydroxybutyrate (PHB) was removed by the addition of diethyl ether (4 vol) to a solution of the lipids in chloroform, followed by centrifugation. LPS was obtained from defatted cell walls by using hot aqueous phenol as described [14]. LPS was mainly recovered from the aqueous phase except in the case of R. pickettii strain A93/71. 2.3. Examination of lipid composition Polar lipids were analysed by TLC on silica gel 60 F254 (Merck) with chloroform/methanol/water (65:25:4, v/v/v) and chloroform/methanol/acetic acid (65:25:10, v/v/v) as solvents, and using ninhydrin, the Dittmer-Lester reagent, iodine vapour, and K-naphthol/sulfuric acid for the detection of components [15]. Phospholipids were also identi¢ed by paper electrophoresis of their water-soluble deacylation products at pH 5.3 and by 31 P-nuclear magnetic resonance (NMR) spectroscopy [2,3]. PHB was identi¢ed by its 1 H-NMR spectrum. All NMR spectra were recorded with a JEOL JNM LA400 instrument. Acid hydrolysates were checked for the presence of ornithine by paper chromatography and electrophoresis [2,3]. 2.4. Analysis of fatty acids Fatty acids in lipid extracts were converted into methyl esters by mild alkaline methanolysis [2,3]. Fatty acids in LPS (and amide-bound acids in some wall lipids) were released by acid hydrolysis, and esteri¢ed by using methanolic HCl [16]. The methyl esters were identi¢ed and quanti¢ed by GLC using a capillary column of BP1 or BP5 (25 mU0.25 mm) in a Perkin Elmer Autosystem XL chromatograph, supported by GLC-MS using a Finnigan MAT GCQ instrument. 3. Results and discussion 3.1. Polar lipid pro¢les Lipid extracts, from which PHB was removed by precipitation with ether, were prepared from whole cells of R. pickettii strain A93/71 grown as shake£ask cultures at 30 or 37³C. TLC showed the absence of OL, as previously reported for the type strain NCTC 11149 (= ATCC 27511 = EY 3254) [3^ 5] and strain GIFU 1943 [6]. In addition to both forms of PE, strain A93/71 produced phosphatidylglycerol (PG) and diphosphatidylglycerol (DPG) in similar proportions at both growth temperatures, and the same phospholipids (but no OL) were present in cell-wall extracts (Table 1). But whereas FEMSLE 8695 25-3-99 L. Galbraith et al. / FEMS Microbiology Letters 173 (1999) 359^364 361 Table 1 Distribution of lipid phosphorusa between di¡erent classes in Ralstonia strains Phospholipid DPG PG PEb a b R. pickettii A93/71 R. eutropha NCIMB 40529 Cells (30³C) Cells (37³C) Walls (30³C) Cells (30³C) Cells (37³C) Walls (30³C) 8 25 67 11 24 65 8 16 76 13 21 66 15 20 65 15 15 70 Results are expressed as percentages of the total peak area for signals in the Combined data for PE1 and (where present) PE2. PE2 was a minor phospholipid in the whole-cell extracts, the ratio of PE2:PE1 in the wall lipids from the fermenter culture (30³C) was W2:1. Similar phospholipid pro¢les were obtained for the walls from fermenter cultures (37³C) of strains CL391/83 and CL348/84, but in both cases trace amounts of OL1 and OL2 were also present, while the ornithine amide lipids were signi¢cant components (comparable with PE2, but less than PE1) in wall extracts from strains T104/72 and CL468/83. Comparable studies of R. eutropha strain NCIMB 40529 showed the absence of OL from whole-cell lipids at 30 and 37³C and the presence of a trace of PE2 only in the 30³C culture. However, the PE2 content in wall lipids was rather higher (ratio of PE1:PE2W10:1) and small proportions of OL1 and OL2 were also detected. Otherwise, the phospholipid pro¢les were similar to those for R. pickettii strain A93/71 (Table 1). Shake-£ask cultures of the type strain of R. eutropha (NCIMB 11842 = ATCC 17697 = EY 3798) gave lipid pro¢les very similar to those from strain NCIMB 40529 (little or no PE2 or OL, whereas a ratio of PE1:PE2W4:1 has been reported [5]). Also as for strain NCIMB 40529, PE2, OL1 and OL2 were minor but clear components of wall lipids from a fermenter culture of strain NCIMB 11842. DPG was not listed as a lipid component in Japanese studies of Burkholderia and Ralstonia spp. [4,5], but has been identi¢ed in R. eutropha [17], R. pickettii [3], R. solanacearum [1] and various Burkholderia spp. [2,3]. The results of this study show that the production of OL is not an absolute distinction between Burkholderia and Ralstonia spp. But unlike chemostat cultures of B. cepacia [12], shake-£ask cultures of R. eutropha and R. pickettii do not seem to adapt to an increase in growth temperature by elevation of the ratio PE2:PE1. 31 P-NMR spectra. 3.2. Fatty acid pro¢les of extractable lipids Fatty acid pro¢les were determined for the cellular lipids of R. pickettii strain A93/71 and R. eutropha strain NCIMB 40529 grown as shake-£ask cultures at 30³C (Table 2). As expected, 2-hydroxy acids (derived from PE2) were only minor or trace components. The major non-hydroxy acids (16:0, 16:1 and 18:1) were those reported in previous studies [3^ 5,17^21]. The proportions of 2-hydroxy acids in the wall lipids from the two strains were signi¢cantly higher (e.g. 2-OH-16:1, 13%; 2-OH-18:1, 7% for R. pickettii) as expected from the greater contents of PE2. Also, 3-OH-16:0 (the amide-bound fatty acid in OL) was detected in acid hydrolysates of wall extracts from R. pickettii T104/72 and R. eutropha NCIMB 40529 shown to contain ornithine. Table 2 Fatty acid compositiona of extractable cellular lipids in Ralstonia strains grown at 30³C Fatty acidb 14 :0 16 :0 16 :1 17 :cy 18 :0 18 :1 19 :cy 2-OH-16:0 2-OH-16:1 2-OH-18:1 a R. pickettii A93/71 c Tr 28 39 1 1 25 3 Tr 1 1 R. eutropha NCIMB 40529 1 34 42 Tr Tr 23 Tr Ndc Nd Nd Data are for ester-bound acids and are expressed as percentages of the total peak area on GLC of the methyl esters. b Shorthand: number before the colon is the number of carbons; number after the colon is the number of double bonds; cy, cyclopropane; OH, hydroxy. c Tr, trace ; Nd, not detected. FEMSLE 8695 25-3-99 362 L. Galbraith et al. / FEMS Microbiology Letters 173 (1999) 359^364 3.3. Fatty acid pro¢les of LPS strains CIP 8238 and CDC 86 (Table 3). In the former case, the LPS was relatively rich in 12:0 rather than 14:0, and in the latter case the LPS contained a signi¢cant proportion of 2-OH-14:0 but little 3-OH16:0. Both patterns have been described for other strains of B. cepacia [23], and 2-OH-14:0 has also been reported as a component of LPS from B. pseudomallei [28]. The virtual absence of 3-OH-16:0 (known to be amide-bound in other strains of B. cepacia and B. pseudomallei [28]) is unlikely to be determined by the growth conditions used (which were the same for B. cepacia strains CIP 8238 and CDC 86). Another pro¢le (mainly 14:0 and 3-OH-14:0, with some 2-OH-14:0) was provided by two strains each of R. eutropha and R. pickettii (Table 3). In a further strain of R. pickettii (A93/71), 2-OH-16:0 was present in place of 2-OH-14:0. The absence of 3-OH-16:0 from the cellular fatty acids has been reported for both R. pickettii [4,5,20,21] and the type strain of R. eutropha [18], although a contradictory claim has been made for the latter [5]. The presence of 2-OH-14:0 (which should not be derived from PE2 or OL2 [3,4]) among the cellular fatty LPS was extracted from defatted cell walls of various Ralstonia and Burkholderia strains, and data on fatty acid composition of aqueous-phase LPS were obtained (Table 3). Where checked (R. pickettii strains A93/71 and T104/72) LPS recovered from the phenolic phase gave results very similar to those shown for the products from the aqueous phase. Several fatty acid pro¢les are apparent. Pro¢les for the LPS from B. cepacia strain CIP 8236 and all other Burkholderia spp. examined were constructed mainly from 14:0 (19^27%), 3-OH-14:0 (26^35%) and 3-OH-16:0 (31^43%). This is in accord with data for LPS from other strains of B. cepacia [22,23], suggesting the absence of qualitative phenotypic variation despite di¡erences in the period and temperature of growth. The presence of the two 3hydroxy acids is also suggested by surveys of cellular fatty acids in di¡erent Burkholderia spp. (e.g. [4,5,10,20,21,24^26]), subject to caution about their additional derivation from OL [2,3,6] or glycolipids [27]. Deviant pro¢les were observed for B. cepacia Table 3 Fatty acid compositiona of LPS in Burkholderia and Ralstonia spp. Organism B. B. B. B. B. B. B. B. B. B. B. B. B. R. R. R. R. R. cepacia CIP 8236 cocovenenans gladioli pv. gladioli gladioli pv. agaricicola glumae plantarii thailandensis vandii vietnamiensis LMG 6998 vietnamiensis LMG 6999 vietnamiensis LMG 10296 cepacia CIP 8238 cepacia CDC 86 pickettii CL468/83 pickettii T104/72 eutropha NCIMB 40529c eutropha NCIMB 11842c pickettii A93/71 Fatty acid 12:0 14:0 14:1(2)b 16:0 16:1(2)b 2-OH-14 :0 3-OH-14 :0 2-OH-16 :0 3-OH-16:0 Tr 0 Tr Tr 0 Tr Tr Tr Tr Tr 2 16 3 Tr Tr 2 2 Tr 20 27 24 25 20 22 21 33 23 19 24 2 12 28 32 18 15 19 1 Tr Tr Tr Tr Tr 1 Tr 1 2 1 Tr 3 4 Tr 3 2 3 2 12 4 3 13 2 3 Tr 2 6 1 3 11 Tr Tr Tr Tr 2 2 Tr 2 2 3 2 3 3 3 4 3 3 1 0 0 0 0 0 1 0 0 0 0 0 Tr Tr Tr 2 Tr 0 12 9 4 14 16 0 33 30 33 35 26 30 32 32 33 29 30 37 56 59 64 59 59 56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 40 31 37 35 38 43 40 32 38 37 39 38 1 0 0 0 0 0 a Data are expressed as percentages of the total peak area on GLC of the methyl esters. 2-Enoic acids (dehydration products of 3-hydroxy acids). c Also contains 16 :1 (NCIMB 40529, 4%; NCIMB 11842, 6%). b FEMSLE 8695 25-3-99 L. Galbraith et al. / FEMS Microbiology Letters 173 (1999) 359^364 acids has also been described for some strains of R. pickettii [20,21] but not the type strain [4,5], and again there are con£icting reports for R. eutropha [5,18]. In neither Ralstonia species did the LPS contain 2-OH-18:1 which is present in R. solanacearum [29,30], together with 3-OH-14:0, the only LPS-speci¢c hydroxy acid [4,5,10,24]. Di¡erent pro¢les have been described for LPS from R. solanacearum biotype II [31]. As indicated by recent nomenclatural changes (e.g. [4,5,13,25,26]), the classi¢cation of the bacteria included in this study is in a state of £ux, and the data on the lipid and fatty acid pro¢les (particularly the 3-hydroxy acids in LPS) may contribute to future developments. [6] [7] [8] [9] [10] Acknowledgments We thank Dr T.L. Pitt and Dr H.M. Aucken (Central Public Health Laboratory, Colindale, London) for most cultures and for the cells of B. thailandensis strain 34, Dr A.J. 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