Subject – BIOLOGY As part of your preparation for your A Level Biology course, you will need to complete a research report on The Structures and Functions of Eukaryotic Cells. Your report will be awarded an attitude score (Outstanding, Motivated, Coasting or Unacceptable). Please see the green box below for the descriptors for O, M, C and U. Your Biology teacher(s) will use the following success criteria to assess your attitude. Success Criteria: Report contains ideas that relate to the report title and does not contain plagiarised content Report contains content relevant to the A level Biology specification (the specification can be found here: http://www.aqa.org.uk/subjects/science/as-and-a-level/biology7401-7402) Report is word-processed, Arial font size 12, 1.5 line spacing with margins with normal widths (2.54 cm) The word limit for the report is 1500 words ± 10% Correct use of spelling, punctuation and grammar Use of annotated diagrams to illustrate key points where relevant Diagrams or illustrations should be referenced where applicable Inclusion of at least 4 references which may be websites (include full web address) Outstanding: You meet all of the success criteria as described above. It is evident you have a deep understanding of the topic. After receiving your ‘next steps’, you have made all improvements to a high standard. Attitude grade awarded: Motivated: You meet most of the success criteria as described above. It is evident you have a good understanding of the topic. After receiving your ‘next steps’, you have made most of the improvements to a high standard. Coasting: You meet some of the success criteria as described above. It is evident you have a moderate understanding of the topic. After receiving your ‘next steps’, you have made some of the improvements but they are not consistently to a high standard. Unacceptable: You meet none of the success criteria as described above. It is evident you have a weak understanding of the topic. After receiving your ‘next steps’, you have not made improvements to a high standard. Signed (teacher): ……………………………………….. Date: ………………………….. Please see the exemplar report below to help clarify minimum expectations. Date: 1st June, 2017 Name: A N Other The Structure and Importance of Biological Molecules The biological molecules include carbohydrates, lipids and proteins. These molecules are vitally important as they make up cells and cells are the building blocks of life. In this report, I will consider each type of biological molecule in turn and will explain their importance. Carbohydrates All carbohydrates contain the elements carbon (C), hydrogen (H) and oxygen (O). Carbohydrates are commonly grouped into the sugars (monosaccharides and disaccharides) and the polysaccharides (Figure 1). Figure 1 The monosaccharides are the monomers that form the larger, polymer carbohydrates. An example of a monosaccharide is glucose, which is a 6 carbon hexose sugar. There are two isomers of glucose; α- and β-glucose (Figure 2). The only difference between the two isomers is the orientation of the circled groups above and below the plane of ring of the hexose. Figure 2: http://adashofscience.com/2013/05/31/macro-nutrients-part-4-carbohydrates/ Monosaccharides are soluble and usually taste sweet. Glucose is one of the most important monosaccharides as it is needed for aerobic and anaerobic respiration. Therefore, it is an important source of energy. A disaccharide is formed when two monosaccharides join together in a condensation reaction. A glycosidic bond forms between the two monosaccharides and a molecule of water is released (Figure 3). Table 1 summarises the formation of some common disaccharides. Figure 3: http://www.slideshare.net/petersbiology/03-lecturepresentation-26147278 Table 1 Monosaccharide(s) Disaccharide Glucose + glucose Maltose Glucose + fructose Sucrose Glucose + galactose Lactose Disaccharides can be broken down into their constituent monosaccharides in hydrolysis reactions (Figure 4). Maltose Glucose Glucose Figure 4: https://www.boundless.com/biology/textbooks/boundless-biologytextbook/biological-macromolecules-3/synthesis-of-biological-macromolecules53/hydrolysis-295-11428/ As you can see from Figures 3 and 4, condensation and hydrolysis are reversible reactions, and as with any chemical reaction in the body, they are catalysed by specific enzymes. The digestive enzyme maltase catalyses the hydrolysis of maltose into glucose. A polysaccharide is formed when more than two monosaccharides join together in a condensation reaction. Important examples of polysaccharides include starch, glycogen and cellulose. Plants store the glucose not needed for respiration as starch. Starch is a mixture of two polysaccharides of α-glucose; amylose and amylopectin. Amylose is a long, unbranched chain of α-glucose. Due to the angle at which the glycosidic bonds form, the amylose chains can coil tightly to form a compact structure which means lots of starch molecules can be stored in a small space (Figure 5). Amylopectin is a long, branched chain of α-glucose. The ‘side branches’ allow easy access to the glycosidic bonds by enzymes. This means that starch is easily hydrolysed and the glucose is released quickly (Figure 5). Starch is insoluble in water and, therefore, doesn’t cause water to enter the cells by osmosis which would make them swell. This makes starch a good storage molecule for glucose, and therefore, a good energy store in plants. Amylose Amylopectin Figure 5: https://thescienceofnutrition.wordpress.com/tag/amylopectin/ Animals store excess α-glucose as glycogen. Its structure is similar to amylopectin, with more ‘side branches’. This means that glucose can be released quickly when needed for energy. Glycogen is a compact, insoluble molecule which makes it suitable as a glucose storage, and therefore, an energy storage molecule. Cellulose is made of long, unbranched chains of β-glucose. The chains are linked together by hydrogen bonds and form strong fibres called microfibrils. These strong cellulose fibres provide support and rigidity to plant cell walls. Cellulose, is therefore, a structural polysaccharide rather than an energy store molecule. Lipids Lipids are sometimes called fats or oils. There are two main types of lipids; triglycerides and phospholipids. Triglycerides contain one molecule of glycerol with three fatty acid chains attached to it. The fatty acid molecules have long ‘tails’ made of hydrocarbons. The tails are hydrophobic which means they repel water molecules and explains why lipids are insoluble in water. There are two types of fatty acid – saturated and unsaturated. Saturated fatty acids do not contain any double bond between the carbon atoms as the fatty acid is ‘saturated’ with hydrogen (Figure 6). Unsaturated fatty acids contain double bonds between the carbon atoms which causes the chain to kink (Figure 6). Figure 6: http://homepage.smc.edu/wissmann_paul/humanbiology/lipids.html Triglycerides are formed from condensation reactions between the fatty acid chains and the glycerol molecule (Figure 7). Ester bonds form with the release of water molecules. ester bond Figure 7: http://study.com/academy/lesson/triacylglycerol-structure-function.html Triglycerides are mainly used as energy storage molecules as their long fatty acid chains contain a large store of chemical energy that can be released when the chains are hydrolysed. Phospholipids are similar in structure to triglycerides apart from one of the fatty acid chains is replaced with a phosphate group. The phosphate group is hydrophilic and so attracts water whereas the fatty acid chains are hydrophobic. This is important as it allows the phospholipids to form a bilayer in cell membranes (Figure 8). The phospholipid bilayer, together with the proteins associated with it, control the entry and exit of substances from cells. Figure 8: http://biology.stackexchange.com/questions/34679/why-dont-phospholipidbilayers-dissolve Both types of lipid are insoluble in water and so do not cause cells to swell due to water moving into cells by osmosis. Proteins Proteins contain polypeptides which are polymers of the monomers, amino acids. All amino acids have the same basic structure; a carboxyl group (-COOH), an amino group (-NH2) and a R group which is variable (Figure 9). Figure 9: http://www.personal.psu.edu/staff/m/b/mbt102/bisci4online/chemistry/chemistry8.htm Before polypeptides are formed, two amino acids bond together during a condensation reaction to form a dipeptide with the release of a water molecule. The bond that is formed is called a peptide bond. The bond is broken during a hydrolysis reaction (Figure 10). Figure 10: http://study.com/academy/lesson/dipeptide-definition-formation-structure.html Proteins are large, complicated molecules and their structures can be described in four levels: the primary, secondary, tertiary and quaternary structures (Figure 11). The primary structure is the sequence of amino acids in the polypeptide chain. The secondary structure is the coiling and twisting of the primary structure into either a α-helix or β-pleated sheet. The tertiary structure is formed when the secondary structure is coiled and folded further into a unique 3D structure. Hydrogen bonds and ionic bonds form between different amino acids due to the attraction between negative and positive charges. Disulfide bridges form when two molecules of the amino acid, cysteine, are close together as the sulfur atom in one cysteine molecule bonds to the sulfur atom in the other cysteine molecule. These bonds are important as they help to maintain each protein’s specific structure, it’s a protein’s structure that allows the protein to function effectively. Some proteins are fully functional with a tertiary structure, however, some proteins require a quaternary structure to be fully functional. This occurs when two or more polypeptide chains are held together by bonds to form the final 3D structure. Examples of quaternary structure proteins are haemoglobin, insulin and collagen. Table 2 describes the most common examples of proteins. Figure 11: http://biowiki.ucdavis.edu/TextMaps/OpenStax_Biology/1%3A_The_Chemistry_of_Life/3% 3A_Biological_Macromolecules/3.4%3A_Proteins Table 2 Type of protein Description Enzymes Due the folding of the polypeptide chains, these proteins are usually spherical in shape. They are soluble and have many roles in metabolism (e.g. digestive enzymes such as proteases, lipases and carbohydrases) and the synthesis of other molecules. Enzymes are biological catalysts which increase the rate of biochemical reactions in organisms. Without enzymes, the rate of reactions would be too slow resulting in cell death and organ failure. Antibodies These proteins are made of four polypeptide chains and are an important part of the immune response. Without antibodies, we would not be able to defend our bodies from pathogens effectively. Transport Proteins These include channel proteins which transport molecules or ions across the cell membrane. The channel proteins contain hydrophobic and hydrophilic regions which cause the protein to fold up in a particular way and form a channel. An example is a glucose channel protein. Without transport proteins, vital molecules and ions would not be able to exit or enter cells. Structural Proteins These proteins consist of long polypeptide chains that are arranged side by side in a parallel fashion with cross-links between them. This arrangement makes these proteins physically strong. Structural proteins include keratin (found in hair and nails) and collagen (found in connective tissue). As my report shows, carbohydrates, lipids and proteins have very unique structures and they are essential for a variety of roles within organisms. Word count: 1395 (excluding reference list below). References All websites were accessed for research purposes between 28th May – 2nd June, 2017. http://adashofscience.com/2013/05/31/macro-nutrients-part-4-carbohydrates/ http://www.slideshare.net/petersbiology/03-lecturepresentation-26147278# https://www.boundless.com/biology/textbooks/boundless-biology-textbook/biologicalmacromolecules-3/synthesis-of-biological-macromolecules-53/hydrolysis-295-11428/ https://thescienceofnutrition.wordpress.com/tag/amylopectin/ http://homepage.smc.edu/wissmann_paul/humanbiology/lipids.html http://study.com/academy/lesson/triacylglycerol-structure-function.html http://biology.stackexchange.com/questions/34679/why-dont-phospholipid-bilayersdissolve http://www.personal.psu.edu/staff/m/b/mbt102/bisci4online/chemistry/chemistry8.htm http://study.com/academy/lesson/dipeptide-definition-formation-structure.html http://biowiki.ucdavis.edu/TextMaps/OpenStax_Biology/1%3A_The_Chemistry_of_Life/3% 3A_Biological_Macromolecules/3.4%3A_Proteins http://www.s-cool.co.uk/a-level/biology/biological-molecules-and-enzymes C Burrows, C Lindle, C McGarry, S Pattinson, C Plowman, R Rogers & H Thompson (2015). A Level Biology. The Complete Course for AQA. Coordination Group Publications. First Edition, Newcastle Upon Tyne. G Toole & S Toole (2015). AQA Biology A level Student Book. Oxford University Press. Second Edition, Oxford.
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