Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model Elias Ganivet1 *, Romain Gaspard1 * Abstract In complex ecosystems like neotropical forests, it is largely unknown how tree species differ in their response of growth to resource availability and individual conditions (e.g. size, density...). Previous studies having usually focused on the seedling or sapling life stage, an understanding of the drivers of tree growth is required to predict changes of community composition and biodiversity, as well as to apply detailed process-based simulation models to predict forest dynamics when environmental conditions change. We used a linear mixed effect approach to quantify the impact of light availability and individual conditions on growth of 134 woody species in a 1 ha plot of lowland tropical rainforest at the Paracou experimental site in French Guiana. To estimate the light avalability, we used an innovative technique by estimating the illumination of the crown from LIDAR data, especially from the LIDAR canopy height model (CHM). A program was created to estimate canopy openings at the crown height of each tree. Results confirm that the annual growth is higher when the tree is well illuminated (high crown illumination), facing few competition and with high maximum size. Moreover, the most important result is that after a certain age, the variation of resources influences no longer the growth of trees. Together resource availability and individual conditions only explained on average 25% of the variation in growth rates, a large part (46%) is explained by mixed effects (species effect). Thereby other non-investigated additional environmental variables (topography, soil, etc.) may contribute to shaping tree growth in tropical rainforests. Keywords tree growth rate – tropical rainforest – light availability – leaf area index – Dawkins’ index – LIDAR 1 Master Ecologie des Forets Tropicales, UMR ‘Ecologie des Forets de Guyane’, 97379 Kourou Cedex, French Guiana *Corresponding authors: [email protected] & [email protected] Introduction In complex ecosystems like neotropical forests, it is largely unknown how tree species differ in their response of growth to resource availability (e.g. light) and individual conditions (e.g. size, density...). An understanding of the drivers of tree growth is required to predict likely changes of species abundance and hence community composition and biodiversity, as well as to apply detailed process-based simulation models to predict forest dynamics and carbon storage under changing disturbance regimes such as logging or hurricanes. Tree growth is an important component of demographic variation among neotropical trees species. It varies widely in response to individual condition (Dalling et al., 2004; Herault et al., 2010) and local resource availability (Clark and Clark, 1999), particularly the light (Denslow, 1987; King et al., 2005). Light is the most limiting resource in rainforest at all stages of development (Whitmore, 1996). It is a limiting factor at low intensity, and too much light or a sudden change may also alter the development (Lovelock et al., 1998). Thereby in some tropical forests, canopy openings are essential for species to grow (Brokaw and Scheiner, 1989). The spatio-temporal variation of light availability is an important component of species coexistence. The heterogeneity of light conditions thus contributes to tropical trees diversity and causes opportunities for niche differentiation (Ricklefs, 1977). Previous studies have usually focused on a small number of species (Clark and Clark, 1992; Davies, 2001; King et al., 2005) and the seedling or sapling life stage (Turner, 1990; Brown and Whitmore, 1992; Sizer and Tanner, 1999; Poorter and Arets, 2003) but rarely on adult trees. Nevertheless, a few studies have included measures of light availability as predictors of tree growth and they consistently found significant effects for the majority of species (Sterck and Bongers, 2001; Herault et al., 2010). In this context, studying the relationship between growth and light on adult trees appears really significant. Other studies have simultaneously included measures of tree size and light availability as predictors of tree growth, and they consistently found significant effects of both variables for the majority of species (Davies, 2001; Uriarte et al., 2004; Rüger et al., 2011). It even appears that light availability, according to the Dawkins’ index (Dawkins, 1958), is a better predictor of growth when the tree size is also included. It also emerges that the maximum DBH (diameter at breast height) is the first predictor of Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 2/10 inherent growth rate and growth response (Herault et al., 2010). Moreover, models of growth response retained three additional and important predictors: stem architecture (Rutishauser et al., 2011), mode of germination and wood density (Baker et al., 2004; Herault et al., 2010). It has especially shown that tropical trees growth rate decreases with the density of wood (Rüger et al., 2011). A further complication in modeling tree growth arises because growth strategies may change with ontogeny, with the development history of a tree within its own lifetime (Clark and Clark, 1999; Poorter et al., 2005). Most species showed clear hump-shaped ontogenetic growth trajectories and attained their maximum growth at 60% of their maximum size, whereas the magnitude of ontogenetic changes in growth rate varied widely among species (Herault et al., 2011). A high abundance of such shifts would profoundly change our current views on the role of disturbance in the dynamics of tropical trees communities (Hubbell et al., 1999). Consequently, it is important to understand how species differ in their response of growth to resource availability and individual conditions in species-rich tropical forests. In this study we modeled this growth with measures of light availability, tree size and wood density. We used a linear mixed model (LMM) that provides a more flexible approach for analyzing data when random effects are present (Bolker et al., 2009). Moreover, the aim of this study is also to estimate the trees crown illumination from LIDAR data, which would be a great novelty in the study of tree communities in tropical forest. Materials and methods growth rate. In total, 433 individuals of 111 species were included in the analysis. We also excluded trees of the Arecaceae family present in the plots, due to their lack of secondary growth. Estimation of light availability Dawkins proposes a "crown illumination index" (Dawkins, 1958) that describes the crown position (from crown with no direct light to emergent crown, Table 1). Class Definition 1 No direct light (crown not lit directly either vertically or laterally) 2 Lateral light (≤10 percent of the projection of the crown exposed to vertical light, crown lit laterally) 3 Some overhead light (10-90 per cent of the vertical projection of the crown exposed to vertical illumination) 4 Full overhead light (≥90 per cent of the vertical projection of the crown exposed to vertical light, lateral light blocked within some or all of the 90°inverted cone encompassing crown) 5 Crown fully exposed to vertical and lateral illumination within the 90°inverted cone encompassing the crown Table 1. Crown illumination index (Dawkins, 1958) Study site The study was conducted in the Guyaflux permanent plots at the Paracou experimental site (5°18’N, 52°55’W), a 5,5 ha plot of lowland tropical rainforest near Sinnamary, French Guiana. The climate of the region is equatorial, with two main seasons: a dry season from August to mid-November and a rainy season (often interrupted by a short drier period) from December to April. The annual rainfall in the vicinity of the station is 3041mm (Gourlet-Fleury et al., 2004). The floristic composition is typical of Guianese rainforests (Ter Steege et al., 2003) with dominant families including Leguminoseae, Chrysobalanaceae, Lecythidaceae, Sapotaceae and Burseraceae. Growth data We analyzed data from the Guyaflux experimental site on a one ha area (plot 1 & 9). All trees with a diameter at breast height (dbh) ≥ 10 cm were mapped, identified to species and measured in 2004 and at least every two years afterwards. Here we used the census intervals from 2008-2013 and determined annual circumference growth rate (mm/yr). We excluded the individuals identified in the census after 2008 because we couldn’t determine a correct circumference This index is the best estimator of light available for the crown (Keeling and Phillips, 2007) and a good predictor of growth rate (Rutishauser et al., 2011). The evaluation of Dawkins’ index is very time-consuming and we had no data for 2008. Thereby we used an innovative method to estimate the index from LIDAR (Light Detection And Ranging) data. Laser altimetry, based on the principle of LIDAR technology, allows high sample density and spatial resolution of the components of a given space (e.g. soil and canopy). The derived altimetric models, ground altitude model (GAM) and canopy altitude model (CAM), give information about the spatial organization of the different types of vegetation. The canopy height model (CHM) was obtained by subtracting the interpolated ground-classified hits (GAM) from the interpolated vegetation-classified altitudes (CAM, Fig. 1). It gave the interpolated height of all points in the canopy in the form of a regularly spaced grid with a 1 m pixel size. Then, using the R software, we created a program to assess the openings of the canopy at the crown height of all trees on the studied site. Inputs needed for the program are LIDAR data (GAM and CAM)) and height of all trees. The Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 3/10 Figure 1. Production of the different elevation models output is an angle between 0°and 90°. This angle represents the opening of the light cone available for the crown, as the mean of eight angles calculated in eight directions. To validate the method, we first evaluated the Dawkins’ index and trees heights in the plot 1 & 9 of the Guyaflux experimental site. Then, we used heights and LIDAR data from 2013 to calculate the crown illumination with the program, and made the comparison with Dawkins’ index from the field. Consistent results would then allow the estimation of the crown illumination in 2008, based on LIDAR data from 2008 and height evaluated in the field on 2013, making the hypothesis that there is no real change for heights since 2008. Estimation of competition To include a competition factor in the model, we used the variation of Leaf Area Index (LAI) between 2008 and 2013. The LAI of vegetation cover, defined as half of the total leaf area per unit ground surface area, determines the productivity of the surface and hence affects the light availability in the understory. We made the hypothesis that an increase of the leaf area during the census intervals could cause more competition for resources (e.g. soil, light...) and limit growth of trees. The LAI is annually measured since 2008, with an indirect method by using a Plant Canopy Analyzer LAI-2000. This optical instrument measures the amounts of direct or diffuse light penetrating the canopy at three angles simultaneously, and hence avoids the need for knowing the foliage-angle distribution. Because the LAI 2000 measures the foliage attenuation of the diffuse sky light, the method requires two simultaneous measures: inside and outside the vegetation. Moreover, to avoid direct light, measurements were made during the sunrise with one LAI 2000 fixed at the top of the flux tower and the second LAI 2000 making the measurements under the canopy every 10 square meter. Fifty values of LAI were measured per plot each year, each time located at different places. We checked the spatial correlation of the measures for the 2013 data, using a multiscale second-order neighborhood analysis (Goreaud and Pélissier, 1999). In case of a spatial correlation, it would be possible to interpolate the measures in 2008 and in 2013, and therefore to calculate the LAI variation through time in all points. The interpolation method was Inverse Distance Weighting (IDW), a type of deterministic method for multivaried interpolation with a known scattered set of points. The assigned values to unknown points would be calculated with a weighted average of the values available at the known points. In order to measure the LAI variation through time, a ∆LAI (LAI2013-LAI2008) was calculated. Statistical Analyses Many biological datasets, such as species within communities, have multiple strata due to the hierarchical nature of the biological world. Linear mixed-effects models (LMMs), also referred to as multilevel/hierarchical models, and their extension, generalized linear mixed-effects models (GLMMs), form a class of models that incorporate Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 4/10 multilevel hierarchies in data. Hence, LMMs and GLMMs are becoming a part of standard methodological toolkits in biological sciences (Bolker et al., 2009). We first described a standard (general) linear model (LM), defined as: y i = β0 + p X βh x hi + ²i wi t h h=1 ²i ∼ N (0, σ2² ) (1) with y i the response value of individual tree i, x hi the value for the hth predictor of individual tree i, β0 the intercept, βh the slope (regression coefficient) of the hth predictor and ²i the error term of individual tree i, which was assumed to follow a centred normal distribution with variance σ2² . Then, extending the LM shown in equation 1, we can fit a linear mixed-effects model with one random factor (‘species-specific effect’) defined as: p X y i s = β0 + βh x hi s + αs + ²i s (2) h=1 wi t h αs ∼ N (0, σ2α ) and ²i s ∼ N (0, σ2² ) with αs the species-specific effect from a normal distribution of species-specific effects with mean of zero and variance of σ2α (between-species variance). As seen in the previous equations, LMMs have by definition more than one variance component (in this case two: σ2α and σ2² ), while LMs have only one (Equations 1). As a starting point, we introduced a mathematical model of ontogenetic growth trajectories that has already been studied (King et al., 2006), as trees size effect. We used the ratio between the individual DBH and the 95th percentile of the DBH values in the species population across unlogged plots at Paracou. Both the ratio and the squared ratio were included to obtain a flexible enough mathematical form allowing a monotonic increase, a monotonic decrease or a humped growth. We also included predictors that could possibly be relevant for explaining growth, like wood density and the 95th percentile of the DBH values for the species (to characterize the growth potential difference of species within the community). Finally, we added the variables of ressources availibity, which are the main predictors that we want to study. The final growth LMM was constructed as : with AGR i s the annual growth rate of the individual i of the focal species s; δp the fitted-model parameters of the individual condition predictor IC (wood density, DBH/DBH95, (DBH/DBH95)² and DBH95); γp the fitted-model parameters of the ressource availability predictor RA (light and LAI); λp the fitted-model parameters of the interactions INT ; ωs the species-specific effect and ²i s the fitted-model residuals. Throughout the data analysis, the Akaike Information Criterion (AIC) was always used in a stepwise algorithm to choose the most parsimonious models and to avoid over-parameterization (Legendre and Legendre, 1998). Moreover, because R² for mixed-effects have theoretical problems (e.g. decreased or negative R² values in larger models) and/or their use is hindered by practical difficulties (e.g. implementation), two types of R² (marginal and conditional R²) were calculated (Nakagawa and Schielzeth, 2012). All analyses were performed using the R project software (http://www.r-project.org/). Results Estimation of crown illumination The result of the estimation of crown illumination is shown in Figure 2. Figure 2. Comparaison between measured Dawkins’ index & calculated crown illumnation (degrees l og (AGR i s + 1) = µ + (γ1 × R A 1i s + ... + γP × R A Pis ) + ... + δP × IC iPs ) + (λ1 × I N Ti1s + ... + λP × I N TiPs ) + (δ1 × IC i1s + ωs + ²i s wi t h and ωs ∼ N (0, σ2ω ) ²i s ∼ N (0, σ2² ) (3) It appears that there is a clear relationship between the field-evaluated Dawkins’ index and the calculated crown illumnation. The calculated values systematically increase with the Dawkins’ index values. In order to test the significance of these results, we performed a pairwise Wilcoxon test between all Dawkins’ index class (Table 2). Most of the tests show a highly significant difference between Dawkins’ index classes. Two slightly less significant results, found between Dawkins’ classes 2 and 3, and Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 5/10 Dawkins’ index 1 2 3 4 2 3 4 5 *** *** *** *** ** *** *** *** *** * Table 2. Result of a pairwise Wilcoxon test on the calculated crown illumination (*P < 0.05, **P < 0.01, ***P < 0.001) (a) 2008 between classes 4 and 5, can be explained by the smaller differences between the classes. Indeed, field identification revealed also difficult between these couples of classes. Nonetheless, these results show that the illumination of the crown can be approximated from LIDAR data, thus allowing to have data without going on the field to make Dawkins’ index measures. So we calculated crown illumination for 2008, using LIDAR data from 2008 and height evaluated in the field on 2013, making the hypothesis that there is no real change for heights since 2008. Correlation of LAI measurement and interpolation The results of the multiscale second-order neighborhood analysis showed that there is a positive correlation from 12 meters (Fig. 3). This means that there is a dependency between the LAI of two points spaced of at least 12 meters. This seems relevant because LAI measures were made with one value per 10 square meters, which explains the lack of correlation below 12 meters. (b) 2013 Figure 4. Evolution of the LAI values on plots 1 & 9 of the Guyaflux experimental site between 2008 & 2013. A LAI of 3 indicates a low leaf area and a LAI of 11 indicates a high leaf area. relation between the ∆LAI and the initial LAI was studied (Fig. 5). The result shows that the variation of LAI between 2008 and 2013 is strongly related to its initial state (LAI 2008). Globally, an area initially opened in 2008 (low LAI) will be more closed in 2013. Areas initially closed stay closed trough time or have a few re-opening process. Figure 3. Spatial correlation test Then, we made an interpolation using Inverse Distance Weighting (IDW) with data from 2008 and 2013 (Fig. 4). It was therefore possible to have LAI values for each point of the area, and so for each tree of the study. It appears that the forest cover has undergone changes during the last five years, particularly on the left side that is more closed in 2013 than in 2008. This canopy closure could have affected the tree growth. In order to well understand the parameter that we want to insert in the model, the Figure 5. Relation between Delta LAI and initial LAI values Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 6/10 Regarding the correlation between both values (initial LAI and variation), we chose to include the initial LAI value in the model as a competition factor and not the variaton of LAI. We made the hypothesis that a weak LAI in 2008 is equivalent to a weak competition for resources (e.g. soil, light...). The absolute growth rate has a direct effect on the LAI variation, so the interpretation of results could be complicated. In fact, the growth of a tree results in the growth of its crown, increasing the amount of leaves and therefore the value of LAI under the tree. Growth model Using Akaike Information Criterion (AIC) in a stepwise algorithm allowed us to choose the most parsimonious model starting from the following null model with only species-specific effect : Parameters Estimate Standard error µ γ1 γ2 δ1 δ2 δ3 λ1 λ2 1.034 0.004 0.174 -0.798 -0.071 0.007 -0.003 0.174 0.213 0.002 0.049 0.351 0.165 0.002 0.002 0.049 σ2ω Marginal R² Conditional R² 0.0213 0.245 0.467 Table 3. Parameters of the LMM of tree growth l og (AGR i s + 1) = µ + ωs + ²i s (4) wi t h ωs ∼ N (0, σ2ω ) and ²i s ∼ N (0, σ2² ) This led us to remove the wood density predictor, because it did not bring a better model. The final growth model was thus constructed as: l og (AGR i s + 1) = µ + (γ1 × l i g ht i + γ2 × L AI i ) + (δ1 × D i s + δ2 × D i2s + δ3 × DB H 95s ) + (λ1 × D i s × l i g ht i + λ2 × D i s × L AI i ) + ωs + ²i s wi t h and (5) ωs ∼ N (0, σ2ω ), ²i s ∼ N (0, σ2² ) µ ¶ DB Hi Di s = DB H 95s with AGR i s the annual growth rate of the individual i of the focal species s; µ, γ1 , γ2 , δ1 , δ2 , δ3 , λ1 and λ2 the fitted-model parameters; l i g ht i the crown illumination of individual tree i, L AI i the LAI under the individual tree i, DB Hi the diameter at breast height of the individual tree i, DB H 95s the 95th percentile of the DBH values in the species s; ω j the species-specific effect and ²i j the fitted-model residuals. The value of each parameters is shown in the table 3. We expected to have opposit signs for δ1 and δ2 but due to interactions, the effect of DB Hi /DB H 95s is more complex to interprate. Furthermore, analysis of R² shows that fixed effects only explained on average 24,5% of the variation in growth rates, a large part (46%) being explained by mixed effects (species effect). The predicted values compared with real AGR (Fig. 6) confirm that null values for growth can’t be predicted with the model. The model also underestimates the AGR for trees with a real AGR > 1cm. Figure 6. Comparison between observed AGR (mm/year) and model predictions (mm/year Making a simulation with the model (Fig. 7), we can interprate results and explain growth regarding each predictor. The ratio DBH/DBH95 is used as a proxy of the ontogenetic stage of the tree and had an obvious effect on AGR. Results confirm that AGR is higher when the tree is well illuminated (high crown illumination), facing few competition (low LAI) and with high maximum size (high DBH95). In addition, a striking result is that the old trees (close to their maximum size) are less influenced by resource availability (crown illumination and LAI predictors) than younger ones. Regarding curves of AGR according to resources availability, two groups of trees can be identified for both parameters. Graphic A (Fig. 7) shows that for trees with a good light availability (crown illumination > 40°), the AGR decreases Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 7/10 Discussion Estimation of crown illumination from LIDAR data One of the main results of this study is the possibility of estimating the crown illumination (ie the canopy openings) from the LIDAR canopy height model. Frequently used in temperate and boreal forests (Brandtberg et al., 2003; Hopkinson et al., 2006; Chasmer et al., 2006), the LIDAR technology remains anecdotal for the study of tropical wet forests. Although some studies in rainforest used LIDAR data (Drake et al., 2002; Hofton et al., 2002), they were often limited to estimate the forest structural characteristics (e.g. ground and canopy altitude model). Therefore the use of these data to estimate the crown illumination represents a highly innovative method. Like in the census plot of Barro Colorado Island, Panama, until LIDAR-mapping data of the entire 50 ha were available, only methods like Dawkins crown illumination index or optical instruments were used to measure how much vegetation was blocking the sky in the entire forest. Measuring light at every tree in 50-ha plot involved an important amount of time and labor. Using this method would allow to save much time and money. However, the height of each tree is required for the calcul, and this data collection is also very time consuming. We used field evaluated values in this study because it was already available. For forthcoming studies, heights can be easily evaluated from diameter using an allometry. Growth model Figure 7. Simulation (only the fixed effect) of the AGR (mm/year) versus the ontogenetic stage (DBH/DBH95) of the tree, with variation of ressource availability and functional traits selected in the final model: A the Crown illumination (degrees) with others predictors fixed to median, B the LAI with others predictors fixed to median and C the DBH95 (cm) with others predictors fixed to median. Marginal densities are plotted for each predictors, with a bandwidth equal to 5% of the amplitude. with ontogenetic stage. This means that the young trees grow quickly than the old trees. For trees with few light available (crown illumination < 40 degrees), the process is reversed: the AGR increases with ontogenetic stage. Graphic B (Fig. 7) shows the same kind of process. For trees who face strong competition (LAI > 5,5), the AGR increases with ontogenetic stage. On the other side, the AGR of trees with few competition (LAI < 5,5) decreases with ontogenetic stage. Graphic C (Fig. 7) shows that the maximum diameter does not modify the shape of the curve linking ontogenetic stage to the AGR, but drives the value of AGR in the way that they induce a translation of the curve. This study allowed to disentangle light and individual effects on growth across a diverse community of tropical tree species. First of all, it has been suggested that wood density varied widely across Amazonian trees (Baker et al., 2004), as well as a high wood density may contribute to lower growth rate because less volume is produced per unit biomass (King et al., 2005). For these reasons we chose to include the wood density in our growth model. However our results show that, contrary to our expectations and to the results from other recent studies (Poorter et al., 2008), wood density was not a good predictor of growth rate. Nevertheless it appears that light, as well as leaf area, could be good predictors of growth rate. The results show that species grew faster at higher light availability and confirms that light is effectively an important limiting resource for woody species in natural forests, not only at the seedling and sapling life stage. In the same way, as expected, species have higher growth rate when the leaf surface is low and therefore when there is few competition. However, a substantial fraction of individual variation in growth remains unexplained and suggests that other factors contribute to shaping tree growth in the tropics. Indeed tree growth is influenced by several non-investigated additional environmental variables (topography, soil, etc.) and also by the unique individual history that depends on complex environmental changes occurring (Herault et al., 2010). Although, for a majority of species, growth rates Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 8/10 were well approximated by the power function which only allows for a monotonic increase or decrease of growth with diameter, many other studies have validated a hump-backed response of growth to diameter (Davies, 2001; Kohyama et al., 2003; Uriarte et al., 2004; Coates et al., 2009; Herault et al., 2010, 2011). It has been especially shown that most species have a size-dependent growth, with maximal growth rates attained at intermediate sizes (Herault et al., 2011). Thus we included in our analysis a priori the possibility that trees may change their inherent growth with developmental stages (δ1 and δ2 ). It has been suggested that the stage for optimal growth rates may be driven by internal shifts in allocation, affecting the balance between photosynthesizing and respiring tissue, or the balance between vegetative growth and reproduction (Thomas, 1996). However this is not supported by our results when considering only the effect of ontogenetic stage on growth. While it was expected to obtain a positive and negative parameter for δ1 and δ2 , both showes a negative value (Tab. 3). However it is also important to consider the interaction mechanism, particularly between crown illumination, LAI and DB Hi /DB H 95s , which results in a more difficult interpretation of these values. The interest of this study is especially to observe the interaction between light availability and tree size. Although it has been postulated that tree growth response to increasing light availability changes with ontogeny (Baraloto et al., 2005), few data exists to test this hypothesis for a large number of species. The analysis of these combined effects on growth revealed contrasting ecological behaviours when values of crown illumination or competition remain constant (Fig. 7). First, when light is scarce, as well as when competition for resources is high, the growth rates of species decreased with increasing ontogenic stage. Then, when light is available and competition for resources is low, species growth rates increased with the ontogenic stage. An explanation could be that growth may increase rapidly with tree size because taller trees have better access to light and a larger photosynthetic area (Sterck et al., 2003). Upon attaining the canopy, many species may spread their crown to further enhance light capture and maximize growth (Poorter et al., 2006). Moreover, the most important result is that, regardless of the availability of resources (and thus competition), older trees have the same growth rate. This means that after a certain age, the variation of resources have no longer influence on the growth of trees. This result is worth noticing, on the one hand because it has never been studied in Paracou, and on the other hand because the literature does not seem to indicate this kind of result. However, some mechanisms could explain this result. First, trees of advanced ontogenetic stage have probably had access to the necessary resources for their growth throughout their lives. Because they have a size close to their maximum size and are well balanced to their environment, their growth will be unaffected by changes in resource availability. Thereby it has been suggested that at even larger diameters, growth rates can decrease because constant biomass investment leads to less overall diameter increment (Herault et al., 2011). Four other mechanisms could also contribute to the decline in growth rate at larger sizes: (i) the respiration load of roots and stems becomes too high (Ryan and Yoder, 1997); (ii) hydraulic pathways become too long, leading to water stress and stomatal closure (Koch et al., 2004); (iii) resources are reallocated to reproduction (Thomas, 1996); or (iv) trees begin to senesce. The resources are thus mainly allocated to maintain the tree in the environment rather than to its growth. Thus its growth response will be slower than a sapling where resources are allocated mainly to growth. Finally this result allows us to distinguish two different ecological groups already pointed in the literature. First, understorey and subcanopy species that perform better in high-light environments when young, probably because they adjust their light-growth performance with age when they are most frequently overtopped by canopy and emergent trees (Herault et al., 2010). The second group includes canopy emergent trees that may not change optimum light environments with age but rather overtop all other trees when larger and thus do not depend on resources fluctuations for growth (Herault et al., 2010). Conclusion This study offers a promising way to model individual growth of tropical rainforest trees. A key result is that it seems now possible to characterize the light environment of a forest from LIDAR data, allowing to save a lot of time. Our linear mixed effect approach permit to show that wood density was not a good predictor of growth rate. As expected it appears that light strongly influences the growth of neotropical trees. Similarly, as shown by some studies growth rates and growth responses varied substantially with tree size. The most striking result remains that old trees (close to their maximum size) are less influenced by resource availability than younger ones. The final growth model has nevertheless shown that fixed effects only explained on average 24,5% of the variation in growth rates, a large part is explained by mixed effects (species effect). Thereby a substantial fraction of variation in growth remains unexplained and suggests that other factors, as well as the unique individual history, contribute to shaping tree growth in the tropics. It is also important to note that a problem inherent in highly diverse tropical forests is the low number of individuals per area of the many rare species (Pitman et al., 1999). In this study, 67 species were represented by only one individual, which limits the species effect on the model. Thereby it could be interesting to extend the study to all plots of the Paracou experimental site. Because crown Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 9/10 heights necessary for analysis are not available on all plots, a growth allometry could be used to estimate them. Acknowledgments We thank S.Traissac, B. Herault, M. Aubry-Kientz & E. Allie for their help in defining the objectives of the study and for the results analysis. We also thank P. Petronelli, B. Burban, J.Y. Goret of CIRAD, without whom this study would not have been possible, for the important field work realized at Paracou and their assitance on the ground. References Baker, T. R., O. L. Phillips, Y. Malhi, S. Almeida, L. Arroyo, A. Di Fiore, T. Erwin, T. J. Killeen, S. G. Laurance, W. F. Laurance, et al. 2004. Variation in wood density determines spatial patterns inAmazonian forest biomass. Global Change Biology 10:545–562. Baraloto, C., D. E. Goldberg, and D. Bonal. 2005. Performance trade-offs among tropical tree seedlings in contrasting microhabitats. Ecology 86:2461–2472. Bolker, B. M., M. E. Brooks, C. J. Clark, S. W. Geange, J. R. Poulsen, M. H. H. Stevens, and J.-S. S. White. 2009. Generalized linear mixed models: a practical guide for ecology and evolution. Trends in ecology & evolution 24:127–135. Brandtberg, T., T. A. Warner, R. E. Landenberger, and J. B. McGraw. 2003. Detection and analysis of individual leaf-off tree crowns in small footprint, high sampling density lidar data from the eastern deciduous forest in North America. Remote sensing of Environment 85:290–303. Brokaw, N. V., and S. M. Scheiner. 1989. Species composition in gaps and structure of a tropical forest. Ecology pages 538–541. Brown, N., and T. Whitmore. 1992. Do dipterocarp seedlings really partition tropical rain forest gaps? Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences 335:369–378. Chasmer, L., C. Hopkinson, and P. Treitz. 2006. Investigating laser pulse penetration through a conifer canopy by integrating airborne and terrestrial lidar. Canadian Journal of Remote Sensing 32:116–125. Clark, D. A., and D. B. Clark. 1992. Life history diversity of canopy and emergent trees in a neotropical rain forest. Ecological monographs 62:315–344. Clark, D. A., and D. B. Clark. 1999. Assessing the growth of tropical rain forest trees: issues for forest modeling and management. Ecological applications 9:981–997. Coates, K. D., C. D. Canham, and P. T. LePage. 2009. Above-versus below-ground competitive effects and responses of a guild of temperate tree species. Journal of Ecology 97:118–130. Dalling, J. W., K. Winter, and S. P. Hubbell. 2004. Variation in growth responses of neotropical pioneers to simulated forest gaps. Functional Ecology 18:725–736. Davies, S. J. 2001. Tree mortality and growth in 11 sympatric Macaranga species in Borneo. Ecology 82:920–932. Dawkins, H., 1958. The management of natural tropical high-forests with special reference to Uganda. Imperial Forestry Institute, University of Oxford, Institute Paper 34. Denslow, J. S. 1987. Tropical rainforest gaps and tree species diversity. Annual review of ecology and systematics 18:431–451. Drake, J. B., R. O. Dubayah, D. B. Clark, R. G. Knox, J. B. Blair, M. A. Hofton, R. L. Chazdon, J. F. Weishampel, and S. Prince. 2002. Estimation of tropical forest structural characteristics using large-footprint lidar. Remote Sensing of Environment 79:305–319. Goreaud, F., and R. Pélissier. 1999. On explicit formulas of edge effect correction for Ripley’s K-function. Journal of Vegetation Science 10:433–438. Gourlet-Fleury, S., J.-M. Guehl, and O. Laroussinie. 2004. Ecology and management of a neotropical rainforest: lessons drawn from Paracou, a long-term experimental research site in French Guiana. Elsevier Paris. Herault, B., B. Bachelot, L. Poorter, V. Rossi, F. Bongers, J. Chave, C. Paine, F. Wagner, and C. Baraloto. 2011. Functional traits shape ontogenetic growth trajectories of rain forest tree species. Journal of ecology 99:1431–1440. Herault, B., J. Ouallet, L. Blanc, F. Wagner, and C. Baraloto. 2010. Growth responses of neotropical trees to logging gaps. Journal of applied ecology 47:821–831. Hofton, M. A., L. Rocchio, J. B. Blair, and R. Dubayah. 2002. Validation of vegetation canopy lidar sub-canopy topography measurements for a dense tropical forest. Journal of Geodynamics 34:491–502. Hopkinson, C., L. Chasmer, K. Lim, P. Treitz, and I. Creed. 2006. Towards a universal lidar canopy height indicator. Canadian Journal of Remote Sensing 32:139–152. Hubbell, S. P., R. B. Foster, S. T. O’Brien, K. Harms, R. Condit, B. Wechsler, S. J. Wright, and S. L. De Lao. 1999. Light-gap disturbances, recruitment limitation, and tree diversity in a neotropical forest. Science 283:554–557. Growth responses of neotropical trees to resource availability and individual condition : an innovative method using LIDAR canopy height model — 10/10 Keeling, H. C., and O. L. Phillips. 2007. A calibration method for the crown illumination index for assessing forest light environments. Forest Ecology and Management 242:431–437. King, D., S. Davies, M. N. Supardi, and S. Tan. 2005. Tree growth is related to light interception and wood density in two mixed dipterocarp forests of Malaysia. Functional ecology 19:445–453. King, D. A., S. J. Davies, and N. S. M. Noor. 2006. Growth and mortality are related to adult tree size in a Malaysian mixed dipterocarp forest. Forest Ecology and Management 223:152–158. Koch, G. W., S. C. Sillett, G. M. Jennings, and S. D. Davis. 2004. The limits to tree height. Nature 428:851–854. Kohyama, T., E. Suzuki, T. Partomihardjo, T. Yamada, and T. Kubo. 2003. Tree species differentiation in growth, recruitment and allometry in relation to maximum height in a Bornean mixed dipterocarp forest. Journal of Ecology 91:797–806. Legendre, P., and L. Legendre. 1998. Numerical Ecology (2nd English ed.) Elsevier Science BV. Amsterdam, The Netherlands . Lovelock, C. E., K. Winter, R. Mersits, and M. Popp. 1998. Responses of communities of tropical tree species to elevated CO2 in a forest clearing. Oecologia 116:207–218. Nakagawa, S., and H. Schielzeth. 2012. A general and simple method for obtaining R2 from generalized linear mixed-effects models. Methods in Ecology and Evolution . Pitman, N. C., J. Terborgh, M. R. Silman, and P. Nunez V. 1999. Tree species distributions in an upper Amazonian forest. Ecology 80:2651–2661. Poorter, L., and E. J. Arets. 2003. Light environment and tree strategies in a Bolivian tropical moist forest: an evaluation of the light partitioning hypothesis. Plant Ecology 166:295–306. Poorter, L., F. Bongers, F. J. Sterck, and H. Wöll. 2005. Beyond the regeneration phase: differentiation of height–light trajectories among tropical tree species. Journal of Ecology 93:256–267. Poorter, L., L. Bongers, and F. Bongers. 2006. Architecture of 54 moist-forest tree species: traits, trade-offs, and functional groups. Ecology 87:1289–1301. Poorter, L., S. J. Wright, H. Paz, D. Ackerly, R. Condit, G. Ibarra-Manríquez, K. E. Harms, J. Licona, M. Martinez-Ramos, S. Mazer, et al. 2008. Are functional traits good predictors of demographic rates? Evidence from five Neotropical forests. Ecology 89:1908–1920. Ricklefs, R. E. 1977. Environmental heterogeneity and plant species diversity: a hypothesis. The American Naturalist 111:376–381. Rüger, N., U. Berger, S. P. Hubbell, G. Vieilledent, and R. Condit. 2011. Growth strategies of tropical tree species: disentangling light and size effects. PloS one 6:e25330. Rutishauser, E., D. Barthélémy, L. Blanc, and N. Eric-André. 2011. Crown fragmentation assessment in tropical trees: method, insights and perspectives. Forest Ecology and Management 261:400–407. Ryan, M. G., and B. J. Yoder. 1997. Hydraulic limits to tree height and tree growth. Bioscience 47:235–242. Sizer, N., and E. V. Tanner. 1999. Responses of woody plant seedlings to edge formation in a lowland tropical rainforest, Amazonia. Biological Conservation 91:135–142. Sterck, F., F. Bongers, H. During, M. Martinez-Ramos, and H. De Kroon. 2003. Module responses in a tropical forest tree analyzed with a matrix model. Ecology 84:2751–2761. Sterck, F. J., and F. Bongers. 2001. Crown development in tropical rain forest trees: patterns with tree height and light availability. Journal of Ecology 89:1–13. Ter Steege, H., N. Pitman, D. Sabatier, H. Castellanos, P. Van Der Hout, D. C. Daly, M. Silveira, O. Phillips, R. Vasquez, T. Van Andel, et al. 2003. A spatial model of tree α-diversity and tree density for the Amazon. Biodiversity & Conservation 12:2255–2277. Thomas, S. C. 1996. Relative size at onset of maturity in rain forest trees: a comparative analysis of 37 Malaysian species. Oikos pages 145–154. Turner, I. 1990. Tree seedling growth and survival in a Malaysian rain forest. Biotropica pages 146–154. Uriarte, M., C. D. Canham, J. Thompson, and J. K. Zimmerman. 2004. A neighborhood analysis of tree growth and survival in a hurricane-driven tropical forest. Ecological Monographs 74:591–614. Whitmore, T. 1996. A review of some aspects of tropical rain forest seedling ecology with suggestions for further enquiry. Man and the Biosphere Series 17:3–40.
© Copyright 2026 Paperzz