IN VITRO SCREENING FOR DROUGHT TOLERANCE IN DIFFERENT SORGHUM (Sorghum bicolor (L.) Moench) VARIETIES A Thesis Submitted to the College of Natural and Computational Sciences Department of Biology, School of Graduate Studies HARAMAYA UNIVERSITY In Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE IN GENETICS By Yohannes Tsago Chare April, 2012 Haramaya University SCHOOL OF GRADUATE STUDIES HARAMAYA UNIVERSITY As Thesis Research advisor, we here by certify that we have read and evaluated this thesis prepared, under our guidance, by Yohannes Tsago Chare, entitled In Vitro Screening for Drought Tolerance in Different Sorghum (Sorghum Bicolor (L.) Moench) Varieties. We recommend that it be submitted as fulfilling the Thesis requirement. Mebeaselassie Andargie (PhD) Major Advisor Abuhay Takele (PhD) Co-advisor _________________ ________________ Signature __________________ Date ________________ Signature Date As member of the Board of Examiners of the Final M. Sc. Thesis Open Defense Examination, we certify that we have read, evaluated the Thesis prepared by Yohannes Tsago Chare and examined the candidate. We recommended that the Thesis be accepted as fulfilling the Thesis requirement for the Degree of Master of Science in Genetics. ______________________ Chairperson ______________________ Internal Examiner ______________________ External Examiner _________________ _______________ Signature Date _________________ Signature _________________ Signature ii _______________ Date _______________ Date DEDICATION I would like to dedicate this thesis to my deceased younger sister Amsal Tsago who always had something nice to say and to my mother Walolie Wada and my father Tsago Chare who never gave up on me. iii STATEMENT OF AUTHOR First, I solemnly declare that this thesis is my bonafide work and that all sources of materials used for this thesis have been duly acknowledged. This thesis has been submitted in partial fulfillment of the requirements of M. Sc. degree at the Haramaya University and is deposited at the University Library to be made available to borrowers under rules of the Library. I solemnly declare that this thesis is not submitted to any other institution anywhere for the award of any academic degree, diploma, or certificate. Brief quotations from this thesis are allowable without special permission provided that accurate acknowledgement of source is made. Requests for permission for extended quotation from or reproduction of this manuscript in whole or in part may be granted by the head of the major department or the Dean of the School of Graduate Studies when in his or her judgment the proposed use of the material is in the interests of scholarship. In all other instances, however, permission must be obtained from the author. Signature: ………………… Name: Yohannes Tsago Chare Place: Haramaya University, Haramaya Date of Submission: ………………… iv BIOGRAPHICAL SKETCH The author was born on May 24, 1988 in Southern Nations Nationalities and People’s Region (SNNPR), Gamo Gofa Zone, Dita Woreda a small Kebele called Anduro to his father Tsago Chare Bashe and his mother Walolie Wada. He attended his elementary and junior education (1-8 grades) at Anduro Elementary School and Chencha Primary and Junior Secondary School respectively. He also attended his high school education (9-12) at Chencha Senior Secondary School. Then joined Haramaya University in 2006/07 and graduated with B.Sc. in Plant Sciences in July 2009. Soon after graduation, he was employed by the Ministry of Education (MoE) and joined Haramaya University to pursue graduate studies in 2010 for the M.Sc. degree in Genetics. v ACKNOWLEDGMENTS It would have been difficult to finalize this thesis research without the help of many people and organizations. First and foremost, my heartfelt appreciation and gratitude goes to my research advisors Dr. Mebeaselassie Andargie and Dr. Abuhay Takele for their constant instruction, guidance, intellectual feedback, enthusiasm and invaluable suggestions while designing and executing the laboratory experiment and during the write-up of the thesis. I want to express my deepest gratitude and appreciation to the Ministry of Education (MoE) for permitting me to join the school of graduate studies and financing the study. I also want to express my deepest gratitude and appreciation to the Ethiopian Institute of Agricultural Research (EIAR) and Melkassa Agricultural Research Center (MARC) for collaborating and permitting work place. My sincere gratitude and indebtedness is extended to Abel Debebe and the biotechnology section staff as well as sorghum improvement section of MARC for their constant cooperation in sharing their experience during the laboratory work and providing me the necessary resources on time. Finally, I would like to thank my uncle Mathewos Bekele and his family for supporting me through the more difficult times of my life. vi ACRONYMS AND ABBREVIATIONS 2, 4-D 2, 4-Dichlorophenoxyacetic Acid ABA Abscisic Acid BA Benzylaminopurine CDK Cyclin-Dependent Kinase CFW Callus Fresh Weight CIE Callus Induction Efficiency CL Coleoptile Length CRD Completely Randomized Block Design CSA Central Statistical Authority ECP Embryogenic Callus Percent EIAR Ethiopian Institute of Agricultural Research FAO Food and Agricultural Organization IAA Indole-3-acetic Acid IBA Indole-3-butyric Acid ICRISAT International Crop Research Institute for the SemiArid Tropics IPCC Intergovernmental Panel on Climate Change KIN Kinetin MARC Melkassa Agricultural Research Center MoE Ministry of Education MS Murashige and Skoog MW Molecular Weight NAA 1-Naphthaleneacetic Acid PEG Polyethylene glycol vii ACRONYMS AND ABBREVIATIONS (Continued) PRP Plant Regeneration Percent QTL Quantitative Trait Loci RDW Root Dry Weight RL Root Length RN Root Number RS Rank Sum RSDW Root to Shoot Dry Weight Ratio SDW Shoot Dry Weight viii TABLE OF CONTENTS DEDICATION iii STATEMENT OF AUTHOR iv BIOGRAPHICAL SKETCH v ACKNOWLEDGMENTS vi ACRONYMS AND ABBREVIATIONS vii TABLE OF CONTENTS ix LIST OF TABLES xii LIST OF FIGURES xiii LIST OF TABLES IN THE APPENDIX xiv ABSTRACT xvi 1. NTRODUCTION 1 2. LITERATURE REVIEW 5 2.1 Sorghum 5 2.1.1 Origin, distribution and taxonomy of sorghum 5 2.1.2 World production and economic importance 7 2.2 Plant Water Deficit (Drought) Stress 9 2.3 The Genetics and Mechanisms of Drought Tolerance in Plants 10 2.4 Effects of Drought on Plant Growth and Development 12 2.4.1 Callus growth dynamics 12 2.4.2 Seedling growth and physiology 13 2.5 Sorghum Research for Drought Tolerance in Ethiopia 14 2.6 The Role of Plant Tissue Culture and Application of PEG in Drought Tolerance Screening 15 ix TABLE OF CONTENTS (Continued) 2.6.1 Composition of in vitro culture medium 17 2.6.2 Plant hormones and growth regulators 17 2.6.3 PEG as an in vitro drought inducer 19 3. MATERIALS AND METHODS 20 3.1 Description of the Research Site 20 3.2 Experimental Design 20 3.3 Plant Materials 20 3.4 In Vitro Screening 20 3.4.1 Callus induction under PEG stress 20 3.4.2 Plant regeneration from induced callus in PEG stress condition 21 3.5 Data Recorded and Statistical Analysis 22 4. RESULT AND DISCUSSION 23 4.1 Callus Induction, Proliferation and Plant Regeneration 23 4.1.1 The effect of PEG induced moisture deficit on callus induction efficiency (CIE) 23 4.1.2 The effect of PEG induced moisture deficit on callus fresh weight (CFW) 25 4.1.3 The effect of PEG induced moisture deficit on embryogenic callus percent (ECP) 28 4.1.4 The effect of PEG induced moisture deficit on plant regeneration percent (PRP) 30 4.2 Morpho-physiological Study of Regenerated Plants 33 4.2.1 The effect of PEG induced moisture deficit on coleoptile length (CL) 33 4.2.2 The effect of PEG induced moisture deficit on root length (RL) 35 4.2.3 The effect of PEG induced moisture deficit on shoot dry weight (SDW) 37 4.2.4 The effect of PEG induced moisture deficit on root dry weight (RDW) 39 4.2.5 The effect of PEG induced moisture deficit on root shoot dry weight ratio (RSDW) 41 4.2.6 The effect of PEG induced moisture deficit on root number (RN) 43 4.3 Association between In vitro Traits 45 4.4 Mann–Whitney–Wilcoxon Rank Sum Test of the Measured Traits 47 x TABLE OF CONTENTS (Continued) 5. SUMMARY AND CONCLUSION 51 6. REFERENCES 54 7. APPENDICES 70 Appendix A: Main Effects of Genotypes across PEG levels 81 Appendix B: Main Effect of PEG Levels across Genotypes 74 Appendix C: General ANOVA Table of the Studied Traits 75 Appendix D: Culture Media Composition and Preparation 78 xi LIST OF TABLES Tables Page 1. Mean callus induction efficiency of genotypes for each PEG treatment level…………….…24 2. Mean callus fresh weight of genotypes for each PEG treatment level……………………….27 3. Mean embryogenic callus percent of genotypes for each PEG treatment level……………....29 4. Mean plant regeneration percent of genotypes for each PEG treatment level………………..32 5. Mean coleoptile length of genotypes for each PEG treatment levels…………………………34 6. Mean root length of genotypes for each PEG treatment levels……………………….............36 7. Mean shoot dry weight of genotypes for each PEG treatment level………………….............38 8. Mean root dry weight of genotypes for each PEG treatment level…………………………...40 9. Mean root shoot weight ratio of genotypes for each PEG treatment level…………………....42 10. Mean root number of genotypes for each PEG treatment level………………………….…..44 11. Correlation coefficient of measured traits…………………………………………………...46 12. Rank sum of all traits measured……………………………………………………………...49 xii LIST OF FIGURES Figures Page 1. Callus induction difference due to PEG stress ……………………………………………23 2. Callus growth difference due to PEG stress………………..…………………………………26 3. Plant regeneration difference due to PEG stress…...................................................................31 xiii LIST OF TABLES IN THE APPENDIX Appendix Tables Page Appendix A: Main Effects of Genotypes across PEG levels………………………………..71 Appendix Table 1: Mean callus induction efficiency, callus fresh weight, embryogenic callus percent and plant regeneration percent of the tested genotypes…………………………………………………………………....71 Appendix Table 2: Mean coleoptile length, root length and root number of the tested Genotypes…………………………………………………………………...72 Appendix Table 3: Mean shoot and root dry weight and root shoot dry weight ratio of the Tested genotypes……………………...…………………………………….73 Appendix B: Main Effect of PEG Levels across Genotypes…………………………………74 Appendix Table 4: Mean callus induction efficiency, callus fresh weight, embryogenic callus percent and plant regeneration across the PEG stress levels………...74 Appendix Table 5: Mean coleoptile length, Root length and root number across the PEG treatment levels……………………………………………………74 Appendix Table 6: Shoot and root dry weight and root shoot dry weight ratio across the PEG stress levels………………………………………………………..75 Appendix C: General ANOVA Table of the Studied Traits………………………………....75 Appendix Table 7: Analysis of Variance Table for CIE ………………………………………...75 Appendix Table 8: Analysis of Variance Table for CFW ………………………………………75 Appendix Table 9: Analysis of Variance Table for ECP …………………….….………………76 Appendix Table 10: Analysis of Variance Table for PRP ……………….…….………………..76 Appendix Table 11: Analysis of Variance Table for CL ..............................................................76 Appendix Table 12: Analysis of Variance Table for RL ………………………..………………76 xiv LIST OF TABLES IN THE APPENDIX (Continued) Appendix Table 13: Analysis of Variance Table for SDW ……………………………….…….77 Appendix Table 14: Analysis of Variance Table for RDW………………...……………………77 Appendix Table 15: Analysis of Variance Table for RSDW…....................................................77 Appendix Table 16: Analysis of Variance Table for RN …………………………………….....78 Appendix D: Culture Media Composition and Preparation…………………………….…..78 Appendix Table 17: Stock solution of macro nutrients…….……………………………………78 Appendix Table 18: Stock solution of micro nutrients….............................................................78 Appendix Table 19: Fe-EDTA (Ethylenediaminetetra acetic acid) solution Preparation…….....79 Appendix Table 20: Vitamins, Amino acids, Carbon and energy sources, growth regulators, and solidifying agent………………………………………………………..79 Appendix Table 21: Preparation of MS medium (1000 ml)…………………………………......80 Appendix Table 22: Agroecological adaptation of the selected sorghum varieties……………..81 xv IN VITRO SCREENING FOR DROUGHT TOLERANCE IN DIFFERENT SORGHUM (Sorghum bicolor (L.) Moench) VARIETIES ABSTRACT Drought is one of the complex environmental factors affecting growth and yield of sorghum in arid and semi-arid areas of the world. Developing crops that have the mechanism to cope with such drought prone production environments is vital. Callus culture is a novel approach addressing cultured cells as selection units independent of whole plant. Sixteen elite sorghum genotypes (Abshir, Chelenko, Raya, Hormat, Gubiye, Gambella-1107, Birmash, Meko, Macia, Seredo, Misikir, Melkam, 76T1#23, ESH-2, Girana-1, and Teshale) were evaluated using PEG as osmoticum at cellular level and then plantlet stage for drought tolerance. The factorial experiment was laid down in a completely randomized design which comprised of a combination of two factors (genotypes and five PEG stress level; 0, 0.5, 1.0, 1.5, and 2.0% (w/v) treatments). The data regarding callus induction efficiency, callus fresh weight, embryogenic callus percentage, plant regeneration percentage, coleoptile length, root length, shoot dry weight, root dry weight, root shoot dry weight ratio and root number revealed highly significant (P< 0.01) interaction of genotypes with the PEG treatments. The correlation analysis revealed strong and significant association between embryogenic callus percent and plant regeneration percent as well as between shoot dry weight and root dry weight. By taking into consideration all the measured traits, Mann Whitney rank sum test revealed that 76T1#23 and Teshale followed by Meko, Gambella-1107 and Melkam showed better drought stress tolerance. Therefore they are recommended to be used as parents for genetic analysis, gene mapping and improvement of drought tolerance. Chelenko, Hormat and Raya appear to be sensitive, therefore they are recommended for crossing and genetic analysis of drought tolerance using diallel mating design or generation mean analysis and also for the QTL (quantitative trait loci) mapping and marker assisted selection. Key words/phrases: Sorghum genotypes, drought tolerance, callus culture, PEG xvi 1. NTRODUCTION Sorghum (Sorghum bicolor (L.) Moench), a tropical plant belonging to the family Poaceae, is the fifth most important crop in many parts of the world and grown for food, feed and industrial purposes. Being a major crop in many parts of Africa, Asia and Latin America (ICRISAT, 2006), the crop is the second crop next to maize grown across all agroecologies in Africa (Wortmann et al., 2006). In Ethiopia, it is the fifth major cereal crop in terms of area and production next teff (Eragrostis teff), barley (Hordeum vulgare), wheat (Triticum aestivum L.) and maize (Zea mays) (CSA, 2011). This crop is the major crop in drought stressed lowland areas that cover 66% of the total arable land in the country (Gebeyehu et al., 2004). The main locations of sorghum production are the north central, northwestern, western and the eastern mid-altitude areas of the country (Wortmann et al., 2006). Compared to other cereals, sorghum is more tolerant to many stresses like heat, drought, salinity and flooding and tolerates a wide range of soil conditions (Ejeta and Knoll, 2007). However, sorghum production in Ethiopia has declined due to several causes such as population growth; land degradation; and use of traditional farm implements (Simon, 2009). In addition, the crop is usually grown in arid and semi-arid parts of the tropics and sub-tropics where it is affected by drought during various growth stages (Amjad et al., 2009). This problem is intensified by the possible global climate change scenarios (IPCC, 2001). For example, Simon (2009) reported that recurring drought due to deficit of rainfall in semi-arid and dry sub-humid areas of the country is one of the major causes of underproduction of sorghum. Therefore, drought is one of the most severe stresses which affect sorghum production in such regions (Bota et al., 2000). Drought is a worldwide problem and a higher proportion of agricultural land is affected with varying degrees of drought (Sidari et al., 2008). Under drought conditions, the soil moisture content throughout the soil profile will be below field capacity, subsequently resulting in poor seed emergence and stand establishment. It causes water deficit in the plant which is one of the most severe stresses faced by the sustainable crop productivity all over the world (Bota et al., 2000). As a result, it restricts expression of full genetic yield potential of a crop. Observations on sorghum fields suggested that poor seedling establishment and retarded growth early in the 1 seedling stages are a common phenomenon (Abuhay, 2000). The consequence of water deficit includes its adverse effects on crop yield by obstruction of various essential physiological and biochemical processes (Farooq et al., 2008). The amount of yield reduction depends not only on the developmental stage of the crop, but also on genotype, intensity and duration of stress (Sinaki et al., 2007). Water deficit remains to be the most limiting factor for better plant performance and higher crop yield (Szilgyi, 2003, as cited in Muhammad et al., 2010). Worldwide, yield losses each year due to drought are estimated to be around USD 500 million (Sharma and Lavanya, 2002). Being a complex phenomenon and considered as one of the most important factors limiting crop yields around the world (Beltrano and Ronco, 2008), drought continues to be a challenge to agricultural scientists in general and plant geneticists in particular, despite many decades of research. In order to thrive under drought stress, plants have developed various drought resistance mechanisms which include drought avoidance, escape and tolerance (Blum, 1979). Drought tolerance is the mechanism causing minimum loss of a trait or yield in a water deficit environment relative to the maximum in a water-constraint free well managed crop (Biswas et al., 2002). Variety development for lowland parts of Ethiopia has focused on selection of early maturing varieties that can escape drought for the last nearly half a century. A number of early sorghum open-pollinated varieties were developed and released for these areas (Asfaw, 2007). There are, however, disadvantages to early maturity. Cultivars that mature extremely early tend to be lower in yield because the plants have a shorter growth period to flower and store nutrients in the grain (Sleper and Poehlman, 2003). Previous investigations that had been undertaken to screen cultivars of sorghum for drought tolerance were mainly focused on post flowering morphological characteristics. For example, Dagnachew (2008) and Zelalem (2008) evaluated sorghum for post-flowering drought tolerance using few morphological criteria. Moreover, Addisie (2010) has reported on evaluating sorghum genotypes for post flowering drought resistance specifically the stay green trait. 2 Even though recent emphasis on field screening under severe drought stress has led to significant developments in the understanding of drought tolerance, it requires several years and diverse environmental conditions to get tolerant genotypes(Rosenow et al., 1983). Since screening is done under field conditions and only in years when rainfall is scarce, such a procedure has always a drawback of inconvenience and inefficiency (Abuhay, 1997). On the other hand, in vitro culture studies play tremendous role by providing efficient way of understanding plant genetic processes in short period of time in a controlled environment. In vitro culture of plant cells and tissue has attracted considerable interest over recent years because it provides the means to study plant physiological aspects and genetic processes in addition to offering the potential to assist in the breeding of improved cultivars by increasing genetic variability (Wani et al., 2010). In this regard, genetic factors are considered to be a major contributor to the in vitro responses of cultured tissues. Differences in the production of embryogenic calli and the regenerated plants have been observed by different workers, and they were found to be dependent on the genotype (Ezatollah et al., 2012). Therefore, the in vitro techniques are considered to be an important complement to classical field screening methods for genotypic variability (Zalc et al., 2004). For in vitro drought stress induction, one of the most popular approaches is to use high molecular weight osmotic substances, like polyethylene glycol (PEG) (Muhammad et al., 2010). PEG is a non penetrable and nontoxic osmotic substance which is used to lower the water potential of the culture medium and it has been used to simulate drought stress in cultured plant tissues. It is commonly established that cell lines that adapt PEG show high level of tolerance to drought stress as compared to cell lines that fall short under the induced stress condition (Abdel-Raheem et al., 2007). Application of in vitro selection for water deficit stress tolerance for different crops using PEG has been reported by different authors (Abdel-Raheem et al., 2007; Wani et al., 2010). Evaluating local accessions for drought tolerance would play a considerable role in crop improvement. Local accessions serve as source materials and are still the backbone of agricultural production in developing world, because they are adapted to various environments 3 and preferred by farmers for various traits under difficult conditions (Addisie, 2010), where modern cultivars are less reliable. Therefore, it is imperative to screen sorghum local varieties for their tolerance to drought under in vitro condition through callus culture. With this background, the present study was aimed to assess the effect of polyethylene glycol induced stress on callusing, callus growth, embryogenesis, plant regeneration, coleoptile elongation, root elongation, dry weight accumulation, and root branching of sorghum genotypes and to identify the superior genotypes from all the accessions for drought tolerance. Objectives of the Study: General objective: To study the level of tolerance of different sorghum varieties for drought stress at in vitro condition Specific Objectives: To study callus induction capacity of sorghum genotypes and growth of callus cells in induced drought stress To study embryogenic callus formation and plant regeneration capacity of sorghum genotypes under induced drought condition To study the growth performance of in vitro regenerated sorghum seedlings 4 2. LITERATURE REVIEW 2.1 Sorghum Sorghum (Sorghum bicolor) (L.) Moench) is a critically important crop in sub-Saharan Africa because of its drought tolerance. It can tolerate hot and dry conditions and also able to withstand heavy rainfall along with some water logging. Sorghum can constantly produce yield under climatic conditions where other cereals fail. Sorghum is indigenous to the semi-arid tropics of Africa (Amuna et al., 2000; Oria et al., 2000). Sorghum is a genus with many species and subspecies and there are several types of sorghum, including grain sorghum, grass sorghum (for pasture and hay), sweet sorghum (for syrups), and Broomcorn. Grain sorghum and maize (corn) are comparable in production. Grain sorghum requires less water than corn, so is likely to be grown as a replacement to corn and produce better yields than corn in hotter and drier areas (Mihiret, 2009) Sorghum is an important food crop in the semi-arid regions of Ethiopia. Because it is less dependent on rainfall, and therefore, less affected by fluctuations in environmental conditions. Still, there is a need to boost its production and adoption both in domestic use and in industrial technologies for bread and for infant foods (Asfaw et al., 2005). 2.1.1 Origin, Distribution and Taxonomy of Sorghum Determining the time and place sorghum was domesticated has been a dilemma for historians. However, it is generally believed that Sorghum domesticated in Africa, more precisely in Ethiopia, between 5000 and 7000 years ago. From there, it was distributed along the trade and shipping routes around the African continent, and through the Middle East to India at least 3000 years ago. It then journeyed along the trade routes across Afro-Asian land mass. Sorghum was first taken to North America in the 1700-1800's through the slave trade from West Africa (Harlan, 1969). It is believed that African slaves took sorghum seeds with them to the US, and that is how it was introduced to what is now the first sorghum growing country in the world. It 5 was re-introduced to Africa in the late 19th century for commercial cultivation and spread to South America and Australia (Vavilov, 1951). Sorghum is now widely cultivated in the dry areas of Africa, Asia (India and China), the Americas, Europe and Australia (Kimber, 2000; Dicko et al., 2006). It is also one of the crops for which Ethiopia has been recognized as being a Vavilovian center of origin and/or diversity (Firew, 2009). Therefore, today sorghum is cultivated across the world in the warmer and drier climatic areas. Sorghum is distributed throughout the tropical, semi-tropical, arid and semi arid regions of the world. More than half of the world’s sorghum is grown in semi-arid tropics of India and Africa, where it is a staple food for millions of poor people (Mehmood et al., 2008). The crop is also found in temperate regions and at altitudes of up to 2300 meters in the tropics. It does well even in low rainfall areas. Sorghum is also termed as “Nature-cared crop” or “the crop camel” because of its strong resistance to harsh environments such as dry weather and high temperature in comparison to other crops. This indicates that sorghum has a potential to adapt itself to the given natural environment. Its ability to produce in areas with marginal rainfall (400 – 600 mm) and high temperatures (i.e. semi arid tropics and sub tropical regions of the world) where it is difficult to grow any other cereal makes the crop highly valued (Shewale, 2008). Sorghum is an important crop in India, Pakistan, Thailand, in central and northern China, Australia, in the dry areas of Argentina and Brazil, Venezuela, USA, France and Italy where it has been given various names. For example, sorghum is known dawa in Housa, sorgho in French, durra Arabic, mashela in Amharic, mtama in Swahili, jowar in Hindi, Kaolian in Chineese milo in Spanish and sorgo in portuguese (Dicko et al., 2006). In Africa, a major growing area runs across West Africa, South of the Sahara, through Sudan, Ethiopia and Somalia. It is also grown in upper Egypt and Uganda, Kenya, Tanzania, Burundi, and Zambia (Dicko et al., 2006). . In Ethiopia, sorghum is an economically, socially and culturally significant crop grown over a wide range of ecological habitats, in the range of 400-3000 m.a.s.l. (Teshome et al., 2007). Sorghum is the only most important cereal in the lowland areas of the country because of its 6 drought tolerance. The greater concentration of sorghum production comes from north central, northwestern, western and the eastern mid-altitude areas of Ethiopia (Wortmann et al., 2006). The mentioning of the name of sorghum dates back in some writings to 1305 A.D. The current formal taxonomic concept of the sorghum genus and species is the one established by Moench. Sorghum was first described by Linnaeus in 1753 under the name of Holcus. Later, the genus sorghum was separated from the Holcus and the combination of Sorghum bicolor was made by Moench (Firew, 2009). The genus Sorghum has 25 recognized species that have been taxonomically classified into five subgenera or sections: Eusorghum, Chaetosorghum, Heterosorghum, Parasorghum and Stiposorghum (Price et al., 2005). S. bicolor (L) Moench is a member of the section Eu-sorghum along with S. propinquum (Kunth) Hitch. And S. halepense (L.) Pers. The remaining 4 sections contain 19 species native to Africa, Australia, and Asia (Kuhlman et al., 2008). Price et al. (2005) has reported species of the genus sorghum have chromosome numbers of 2n = 2x = 10, 20, 30 or 40 of which Sorghum Bicolor has 2n = 2x =20. 2.1.2 World Production and Economic Importance The annual production of sorghum is over 60 million tons on about 45 million hectares, of which USA and Africa produce 20 and 40%, respectively. Developing countries account for nearly 90% of the world's sorghum area and 77% of the total production (FAO, 2011). It is estimated that more than 300 million people from developing countries are essentially dependent on sorghum as a source of energy (Godwin and Gray, 2000). More than 35% of sorghum produced in Africa is used directly for human consumption and the rest is used primarily for animal feed, alcohol production and industrial products (Dicko et al., 2006). This makes sorghum one of the main staple crops for the world's poorest and most food insecure people. Though the purpose of sorghum production in the developed countries is mainly for animal feed, in Africa and Asia the grain is mostly used for human consumption. The main foods prepared from sorghum are: tortillas (Latin America), thin porridge, e.g. bouillie (Africa and Asia), stiff 7 porridge (West Africa), couscous (Africa), injera (Ethiopia), nasha and kisra (Sudan), traditional beers, e.g. dolo, tchapallo, pito, burukutu, etc. (South Africa), ogi (Nigeria), baked products (USA, Japan, Africa), etc. Tortillas are a kind of chips prepared from sorghum alone or by mixing sorghum with maize and cassava where as nasha is a traditional weaning food (infant porridge) prepared by fermentation of sorghum flour. Ogi is an example of traditionally fermented sorghum used as weaning food, which has been upgraded to a semi industrial scale and injera is a locally fermented pancake-like bread prepared from sorghum in Ethiopia (Yetneberk et al., 2004). Finally, Kisra is a traditional bread prepared from fermented dough of sorghum (Dicko et al., 2006). In Ethiopia, sorghum is the fifth among major cereal crop for private peasant holdings in terms of area and production next to teff (Eragrostis teff), barley (Hordeum vulgare), wheat (Triticum aestivum L.) and maize (Zea mays) (CSA, 2011). The crop has been grown in different agroecological zones of the country. Based on their adaptation zones within the country, cultivated sorghums are grouped into highland, intermediate and lowland sorghum (Alemayehu, 2003). This classification has been made largely based on altitude, length of growing period and amount and distribution of rainfall (Yilma and Abebe, 1987). These authors indicated that intermediate zone sorghum grows at an altitude of 1600-1900 m.a.s.l and those of lowlands grow in areas of altitude less than 1600 m.a.s.l. Being an indigenous crop to Ethiopia, sorghum exists in tremendous diversity throughout the growing areas, which contains pockets of geographical isolation, with extremely broad and valuable genetic base for potential breeding and improvement work in the country and the world at large. Moreover, in Ethiopia, many efforts have been made to address the drought problem in sorghum production. Breeding programmes in Ethiopia have released a number of varieties from lowland areas which give reasonable yield in drought prone areas (Asfaw, 2007). Sorghum, in a typical production environment, averages between 5 and 15% of its recorded maximum yield potential (Asfaw et al., 2005). While biotic stresses reduce yield potential in specific environments, most of the reduction in sorghum yield is attributed to abiotic stress, primarily drought. In Ethiopia, even if sorghum has tremendous economic importance, its 8 production is affected by different abiotic constraints among which drought is an important stress (Chala et al., 2007). Yields are still limited by drought because most of the mechanisms of drought tolerance, their interactive effects, and associated morphological and physiological modifications and symptoms have not yet been fully identified and understood by plant geneticists, breeders and physiologists (Abdulai, 2005). 2.2 Plant Water Deficit (Drought) Stress Plants often encounter variety of environmental factors which can be categorized as biotic or abiotic in their nature. Biotic environmental factors, resulting from interactions with other organisms include, infection or mechanical damage by herbivory or trampling, as well as effects of symbiosis or parasitism. On the other hand, abiotic environmental factors include drought, salinity, and extreme temperatures, chemical toxicity, and oxidative stress. Abiotic stresses are serious threats to agriculture and result in the deterioration of the environment that influences development, growth and productivity of plants (Addisie, 2010). Abiotic stress is the primary cause of crop loss worldwide, reducing average yields for most major crop plants by more than 50% (Soltani et al., 2006). One of the most important abiotic factors limiting plant growth and productivity is water stress brought about by drought, which is a widespread problem around the world. Losses in crop yield due to water stress probably exceed the loss from all other causes combined (Bartels and Souer, 2004). Drought, commonly known as water stress, is one of the environmental stresses constraining global crop production seriously and recent global climate change has made this situation more serious (Sibel and Birol, 2007; Centritto et al., 2008). Drought is a major environmental factor that determines plant productivity and plant distribution. It affects more than 10 percent of the arable land (Bartels and Ramanjulu, 2005). The percentage of drought affected land areas is more than doubled from 1970s to the early 2000s in the world (Isendahl and Schmidt, 2006). Agricultural production was also affected by the limitation of water sources because of the serious drought problem in many countries. For the purpose of crop production, yield improvement and yield stability under water stress conditions and developing of drought tolerant varieties is the best option (Siddique et al., 2000). To meet this goal, differential screening based 9 on physical and biochemical processes at both cellular and whole organism levels activated at early stages of plant development have a great importance. Larcher (2003) denotes drought as a period without appreciable precipitation, during which the water content of the soil is reduced to an extent that plants suffer from lack of water. This author has also stated that drought causes stress in plants if too little water is available in a suitable thermodynamic state. Consequently, the biological role of water such as serving as solvent, transport medium, as electron donor in the Hill reaction, and as coolant is often impaired. Generally, water stress affects plant growth or morphological traits by affecting various essential physiological and biochemical processes (Farooq et al., 2008). On the other hand, the effect of water stress is a function of genotype, intensity and duration of stress, weather conditions, growth and developmental stages of different crop plant species (Sinaki et al., 2007). 2.3 The Genetics and Mechanisms of Drought Tolerance in Plants Drought tolerance is the capability to survive water-deficit with low tissue water potential. In most cases, the responses of plants to tissue water-deficit determine their level of drought tolerance (Blum, 1979). This is achieved by maintaining sufficient cell turgor to allow metabolism to continue under increasing water deficits. The maintenance of turgor takes place through osmotic adjustment (accumulation of compatible solutes in cell), increase in elasticity and decrease in cell size and desiccation tolerance by protoplasmic resistance (Turner and Kramer, 1980). Furthermore, Gunasekera and Berkowitz (1992) have indicated that osmotic adjustment enables water uptake to continue under increasing stress in many species and, in some cases, is associated with maintenance of growth and stable yield under drought. Therefore, tolerant plants can endure stress by undergoing aforesaid physiological changes in their tissues thus maintain their cell water potential turgidity at normal level, in spite of soil drought. On the other hand, plants vary greatly in their capability to tolerate stress conditions; hence some of them are unable to endure stress so wilt and die (Simmons et al., 1989). Plants respond to changing drought stimulus with the expression of specific sets of genes that allow the plants to adapt to the altered environmental conditions. There are two most established 10 approaches to understand the basic genetic responses of plants to drought which involve studying candidate genes and differential screening. The former is comparing the expression of genes for the enzymes in drought-induced metabolic pathways under drought versus non-drought conditions. The expression of these genes is important for drought tolerance and provide useful information on which genes are expressed as response of drought stimuli. The second approach uses differential screening to isolate up-regulated genes encoding proteins of known function associated with desiccation (Sorrells et al., 2007). Most of these genes are induced by the plant hormone abscisic acid (ABA) (Guerrero et al., 1990; Nordin et al., 1991; Yamaguchi-Shinozaki et al., 1992). ABA is synthesized through the carotenoid biosynthesis pathway and its concentration regulated when there are changes in cellular dehydration. Its synthesis becomes rapid when there is loss of turgor as a result of water deficit. Increased levels of ABA can, in turn, induce changes in gene expression resulting in stomatal closure in leaves, inhibition of photosynthesis and the growth of leaves, stems and promote growth of roots (Quarrie and Lister, 1984; Guerrero and Mullet, 1986). Cell division is the principal determinant of meristem activity and determines the overall plant growth rate. It has been described that environmental controls of growth rate like water deficit act by regulating cyclin-dependent kinase (CDK) activity and cell division (Cockcroft et al., 2000; West et al., 2004). CDKs are a family of protein kinases, each with a positive regulatory subunit termed a cyclin and the catalytic subunit CDK (den Boer and Murray, 2000). CDKs are emerging as key players in regulation of cell division and are likely to be regulated at both transcriptional and post-translational levels in response to stress. For example, maize ZmCdc2 (a member of the CDK family) was shown to be down regulated by water stress leading to a decrease in mitotic cell cycling (Setter and Flanningan, 2001). Cell expansion is a coordinately regulated process at the whole plant level and is influenced by external stimuli including water availability. The rate of cell expansion is mainly determined by two parameters, cell wall extensibility and cellular osmotic potential. The enlargement of plant cells involves control of wall synthesis and expansion, solute and water transport, membrane synthesis, Golgi secretion, ion transport and other processes (Cosgrove, 1997). 11 2.4 Effects of Drought on Plant Growth and Development Water stress is one of the stress factors and it has a significant effect on the growth and development of plants. Tolerance to this abiotic stress is a complex phenomenon, comprising a number of physio-biochemical processes at both cellular and whole organism levels activated at different stages of plant development (Mahajan and Tuteja, 2005). Inadequate water supplement in soil limits the productive potential of several plant species by provoking smaller growth during the vegetative period as well as the reproductive period (Sibel and Birol, 2007). Comparative studies on the effect of different plants have showed that water stress reduced the growth and development while compared to those of unstressed plants. So, a plant or a group of plants showing better growth with limited soil moisture than other plants in a similar environments are understood to be drought tolerant (Kumar and Sharma, 2009). Effects of water stress on growth and development under in vitro condition and early seedling stage have been documented (Abuhay, 1997; Abuhay, 2000; Ali et al., 2009). 2.4.1 Callus Growth Dynamics Basically PEG application in culture media callus growth and dramatic decline in callus formation ability has been reported in various plants which were forced by water deficit conditions imposed by high molecular weight PEG as in vitro drought inducer (Dragiiska et al., 1996; Ezatollah et al., 2012; Gopal and Iwama, 2007; Wani et al., 2010). There is an inherent tolerance in callus of crop plants to PEG- induced drought in culture media (Wani et al., 2010). This author has also revealed that increased water stress was induced by increased concentration of PEG which caused a progressive reduction in callus fresh weight. There was normal callus formation and plant regeneration in the no-stress medium, but increased PEG concentration decreased callus formation efficiency and plant regeneration in the stress medium. Previously, Abdel-Raheem et al (2007) stated that callus formation and plant regeneration in PEG- induced drought condition of the culture medium is higher in relatively tolerant varieties and decreases with increased level of the stress. Therefore, the inherent capacity for callus formation and regeneration on growth medium with PEG is an easiest way to identify cultivars which are genetically tolerant to water deficit. 12 2.4.2 Seedling Growth and Physiology Arrest of plant growth during stress conditions is a common feature of the physiological response. Mild osmotic stress leads rapidly to growth inhibition of leaves and stems, whereas roots may continue to elongate. The inhibition of shoot growth during water deficit is thought to contribute to solute accumulation and thus eventually to osmotic adjustment. For instance, hexose accumulation accounts for a large proportion of the osmotic potential in the cell elongation zone in cells of the maize root tip (Bartels and Ramanjulu, 2005). On the other hand, continuation of root growth and branching under drought stress is an adaptive mechanism that facilitates water uptake (Munns et al., 2000). In the past, different morpho-physiological traits have been potentially utilized for screening genotypes of different crops under water stress conditions. These include seedling traits like shoot weight, root weight, root and shoot lengths, root:shoot ratio and coleoptiles length at seedling stage (Dhanda et al., 2004; Taiz and Zeiger, 2006). Early and rapid elongation of roots is important indication of drought tolerance. Ability of continued elongation of root under situation of water stress was remarkable character of tolerant genotypes. Also root weight have been used as selection index and highest root weight was recorded by drought tolerant cultivars whereas lowest weight was noted in susceptible ones (Kulkarni and Deshpande, 2007). Moreover, a survey of literature revealed that morpho-physiological traits such as flag leaf area, specific leaf weight, leaf dry matter, excised leaf weight loss (Bhutta, 2007), relative dry weight, relative water content (Colom and Vazzana, 2003), residual transpiration (Sabour et al., 1997 as cited in Ali et al., 2009) and cell membrane stability (Rahman et al., 2006) had been widely used as selection parameters contributing towards drought tolerance for various crop plants in addition to grain yield. Water availability mostly affects dry matter accumulation in different plant parts. Reduction in dry matter accumulation and partitioning are typical responses of crop plants when subjected to moisture deficit (Abuhay, 1997). In previous studies under field condition, dry matter accumulation in the stem is favored by adequate moisture while the root is favored by moisture stress (Ramu et al., 2008). 13 Screening sorghum varieties for relative drought tolerance has been attempted by various workers using different physiological, and biochemical parameters. It has been documented that root growth, leaf area development, synthesis of epicuticular wax and osmotic adjustment under stress are some of the guidelines in characterizing the genotypes for stress tolerance in sorghum (Blum and Sullivan, 1987). Barrs and Weatherly (1962) developed the concept of relative water content and the reduction in relative water content under stress has been used as a measure of drought tolerance by several workers. In addition, percent germination, seedling shoot dry weight, seedling shoot length, and leaf area has been used to investigate performance of different sorghum genotypes in water deficit conditions (Abuhay, 2000). Pawar (2007) used plant height at different growth stages, dry weight of different plant parts, and leaf area as physiological indices for drought tolerance in sorghum. An understanding of the genetic basis of drought tolerance in crop plants based on various morpho-physiological traits has been also a pre-requisite for breeders to produce superior genotype through either conventional breeding methodology or genetic engineering (Mitra, 2001; Chen et al., 2004). Therefore identification and analysis of plant traits with sound and positive association with drought tolerance and high productivity under drought is necessary (Rauf and Sadaqat, 2008). Genetic management through cultivation of drought-tolerant crops and varieties in specific crops is a feasible proposition to exploit such constrained ecosystems. 2.5 Sorghum Research for Drought Tolerance in Ethiopia The national and regional research institutions in Ethiopia have released significant number of varieties of sorghum for commercial production. The varieties are broadly divided as highland varieties such as Alemaya 70, ETS2752, Chiro, ETS1176; mid-altitude varieties such as IS9302, Birmash, Baji; and lowland varieties such as Gambella 1107, 76T1#23, Seredo, Meko, Teshale, Gubiye, Abshir (Asfaw et al., 2005). Currently, sorghum breeding in Ethiopia is fully engaged in different research activities in sorghum drought tolerance. 14 So far, a number of varieties which are sources of drought tolerance genes have been identified from the Ethiopian gene pools by ICRISAT and other scientists in the region and now they are in use in different parts of the world to generate drought tolerant/resistant sorghum varieties (Borrell and Hammer, 2000). In addition to these, the Ethiopian sorghum germplasm is also noted worldwide as source for useful genes such as cold tolerance, good grain quality, and disease and insect resistance (Yilma and Abebe, 1987; Doggett, 1988). Zelalem (2008) evaluated sorghum accessions for post-flowering drought tolerance using some morphological and agronomic criteria. The author has reported the presence of variation in tolerance among 165 sorghum accessions evaluated. Dagnachew (2008) has indicated that estimation of genetic diversity in sorghum is very important in the evaluation of accessions as possible source of genes for a given trait of interest like trait for drought resistance/ tolerance. Moreover, Abuhay (2000) investigated genotypic difference among sorghum genotypes starting from seedling stage in green house under various soil water deficit conditions. This author emphasized that sorghum genotypes differed in response to variable soil moisture difference. 2.6 The Role of Plant Tissue Culture and Application of PEG in Drought Tolerance Screening Plant tissue culture broadly refers to the in vitro cultivation of plants, seeds and parts of the plants such as leaf, immature and mature embryos, flower buds, anthers, microspores, ovaries, tissues, single cells, protoplasts and others. Tissue culture technology can potentially regenerate species of any plant in the laboratory. Improved in vitro tissue culture systems are needed for manipulation of cereal germplasms for improved performance (Aulinger, 2002; Zhang et al., 2004). New complete plants can be obtained from different explants through direct or indirect morphogenesis and through somatic embryogenesis. Direct morphogenesis is the production of shoots from explants without passing through callus (unorganized tissue) phase known as organ culture, which include meristem cultures, shoot cultures, embryo cultures and isolated root cultures. Whereas indirect morphogenesis refers to induction of shoots through callus phase 15 grouped as unorganized tissue cultures, which include callus cultures, suspension or cell cultures or anther cultures (Khanna, 2003; Tileye et al., 2005). Plant tissue culture is based on three cell doctrines (concepts). The first one is plasticity which is the flexibility or adaptability of tissue or cells to altered chemical and physical factors such as hormones, nutrient elements, fixed carbon sources, light, temperature, and culture vessels. The other decisive concept is totipotency which is the capacity of cells or tissues to develop in to any of the structure of the plant; and finally, dedifferentiation in which differentiated cells get de-differentiated in order to pave way for a new line of development (Hartmann et al., 2002; Khanna, 2003). Studying the effect of a particular stress using in vitro culture techniques minimize environmental variations due to defined nutrient media, controlled conditions and homogeneity of stress application. In addition, the simplicity of such manipulations enables studying large plant population and stress treatments in a limited space and short period of time. Simulation of drought stress under in vitro conditions during the regeneration process constitutes a convenient way to study the effects of drought on the morphogenic responses. Therefore, applying osmotic stress during the regeneration phase was found to be the most efficient for the selection of drought tolerant genotypes (Hsissou and Bouharmont, 1994) Genetic factors are considered to be a major contributor to the in vitro response of cultured tissues. Differences in the production of embryogenic calli and the regenerated plantlets have been observed in different times and they were dependent on the genotype (Ganeshan et al., 2003). In vitro selection for tolerance to abiotic stress depends on the development of efficient and reliable callus induction and plant regeneration systems. 16 2.6.1 Composition of In Vitro Culture Medium In most plants, successful regeneration from the callus is carried out after a series of subcultures in different media. The basic nutritional requirements of in vitro cultured plant cells are very similar to those utilized by plants in nature. However, the nutritional composition used in vitro varies depending on the type of protoplasts, cells, tissues, organs, and plant species (Deen and Mohamoud, 1996). The mineral salts, sugar as carbon source and water are the main components for most plant tissue culture media. Sugar (most commonly, sucrose) is an important component in medium and its addition is essential for in vitro growth and development of plants because photosynthesis is insufficient, due to the growth taking place in conditions unfavorable for photosynthesis or without photosynthesis (Gamborg and Phillips, 1995). Cultured cells are normally capable of manufacturing all of the required amino acids. Yet, the addition of an amino acid or mixtures of amino acids may be used to stimulate cell growth and facilitate plant regeneration (Mohamed, 1996). Plant tissues and organs are raised in vitro on artificial media that supply the nutrients necessary for growth. For healthy and vigorous growth, intact plants need to take up from the soil. The most commonly used medium is the formulation of Murashige and Skoog (1962). This medium was formulated for optimal growth of tobacco callus and the development involved a large number of dose-response curves for the various essential minerals. Mineral nutrients are one of the most basic constituents of plant tissue culture media. Unlike carbon sources, plant growth regulators, vitamins, amino acids, gelling agents (agar) and undefined substances that may or may not be included in any given medium, the macro and micro mineral nutrients are always present (van Staden et al., 2008). 2.6.2 Plant Hormones and Growth Regulators The influence of plant growth regulators on the cell culture media differs with the type and concentration of growth regulator. Auxin (IAA, NAA, 2, 4-D and IBA) is a plant growth regulator which is known to be distributed universally in higher plants. This compound is generated by the apical meristems of both shoots and roots and manages the expansion of the 17 tissue cells. Auxin was also proved to be responsible for apical dominance (the inhibition of lateral bud and lateral root development by the active apical meristem), in the retention or falling of leaves and flower buds, in flower development and in the initiation and continuance of fruit development (Davies, 1995). According to Petrasek et al. (2002), the division and growth of most types of plant cells cultured in vitro require an external source of auxin. Artificial auxins such as 2, 4-dichlorophenoxyacetic acid (2, 4-D) are essential constituents of culture media. Generally, the auxin, 2, 4-D, is critical in the induction of primary calli and embryogenic calli, which was in accordance with the results of some monocotyledonous plants (Vikrant, 2003; Jogeswar et al., 2007). In cereals, 2, 4-D has been used for callus induction and maintenance (Pellegrineschi et al., 2004) or for induction of somatic embryogenesis (Vikrant, 2003). Cytokinins are other classes of plant hormones used in plant tissue cultures. Considering natural cytokinins, benzyladenine (BA) or kinetin (6-furfurylaminopurine) are most frequently used in plant tissue culture systems (Barciszewski et al., 1999). The effect of cytokinins is most noticeable in tissue cultures where they are used, often in combination with auxins, to stimulate cell division and control morphogenesis. Applied to shoot culture media, these compounds overcome apical dominance and release lateral buds from dormancy (van Staden et al., 2008). It has been reported that the callus production and plant regeneration of sorghum were influenced by indole-3-acetic acid (IAA), 6-benzyladenine (6-BA) and Kinetin (KT). IAA and naphthaleneacetic acid (NAA) were supplemented during regeneration of sorghum calli culture (Hagio, 2002). Indole-3-butyric acid (IBA) was known to induce roots in many cereals such as rice and sorghum (Jogeswar et al., 2007). . 18 2.6.3 PEG as an In Vitro Drought Inducer It appears that in vitro selection for stress tolerance will continue to have its significant place in the strategy of establishing plant systems with optimal stress reaction and productivity. Polyethylene-glycol (PEG) of high molecular weight have been long used to simulate drought stress in plants as non-penetrating and non-toxic osmotic agent which is able to lower the water potential of the medium in a way similar to soil drying (Abdel-Raheem et al., 2007). In vitro selection for drought tolerance commonly uses PEG as selection component. This method has been applied to several plants (Muhammad et al., 2010; Wani et al., 2010; Ezatollah et al., 2012). A positive correlation between the seed germinating capability at the PEG containing media and the plant growth under stress condition has been found. PEG could be applied for stimulating drought because it could inhibit water in such a way that no water is provided for somatic cell, except for the callus which has particular mechanism for absorbing water. Only the tolerant callus which bears PEG selection media could increase its tolerance against drought stress (Lestari, 2006). Selective media treated with PEG inhibited the growth and development of the soybean explants and decreased the number of formed somatic embryos. The increasing amount of PEG added to the selective media brought the deterioration influence of PEG on somatic/callus embryo. In a study by Lestari (2006), treating tolerant soybean genotypes with 15% solution of PEG most of the genotypes survived where as in the same study about half of moderately tolerant genotypes survived. Selection of the callus of several rice varieties conducted by Prakash et al., (1994) using 5, 10, 15 mg/l of PEG (6000) successfully resulted in drought tolerant plants. In this work, five plants from three varieties exhibited their tolerance to drought. In another study conducted by Wani et al. (2010), increased levels of PEG (6000) (0, 0.5, 1.0, 1.5, 2.0 %) were used to create water stress in callus initiation and plant regeneration in rice. There was reduction in callus induction ability and plant regeneration efficiency with increasing levels of PEG (6000) stress. 19 3. MATERIALS AND METHODS 3.1 Description of the Research Site The experiment was conducted in the tissue culture laboratory of Melkassa Agricultural Research Center which is located 17 km SW of Nazareth town and 117 km away from Addis Ababa at 8o24’N latitude and 39o21’E longitude and at elevation of 1550 m.a.s.l. (www.eiar.gov.et, accessed date: 25th April, 2012). 3.2 Experimental Design Sixteen sorghum varieties from more than 19 released varieties were selected based on their agro-ecological adaptation (Appendix Table 22). Five level concentrations of PEG were used as treatments. PEG levels were kept as low as 2% so that it will be possible to get enough population of regenerated plants for morphological study. The experiment of the study was laid out in a completely randomized design (CRD) in factorial arrangement with three replications (Gomez and Gomez, 1976). 3.3 Plant Materials Seeds of sixteen elite sorghum varieties (Abshir, Chelenko, Raya, Hormat, Gubiye, Gambella1107, Birmash, Meko, ESH-2, Seredo, Misikir, 76T1#23, Melkam, Macia, Girana-1, and Teshale) were obtained from National sorghum improvement project of Melkassa agricultural research center. 3.4 In Vitro Screening 3.4.1 Callus Induction under PEG Stress MS media (Murashige and Skoog, 1962) supplemented with plant hormones and growth regulators as described by Zhao et al., (2010) for callus induction were prepared and the pH was adjusted to 5.8 using 1N HCl and 1N NaOH. The media were heated to boiling for proper mixing with agar before 25ml was dispensed into culture jars and labeled. The media in the jars was 20 closed and sealed with parafilm. The sterilization of media was carried out in an autoclave at 120 o C under 15 lb/ in2 pressure for 15 minutes. Then the media were kept for three days before culturing. The seeds of the germplasm were washed in running tap water for 30 minutes, sterilized in 75% ethanol for three minutes and in 0.2% HgCl2 for 15-20 minutes, and then washed 3-5 times in sterilized water. Thirty seeds were cultured per each jar. The jars were sealed with parafilm and placed in a growth chamber in the dark at 25 ± 2ºC. After four weeks of incubation, the induced calli were excised and sub-cultured, under the same growth conditions, and in the same MS medium to which five level concentrations of polyethylene glycol (PEG) (6000) (0, 0.5, 1.0, 1.5, 2.0 %) has been added (Wani et al., 2010). The incubation period was four weeks in which the media is replaced with the same media in two weeks. 3.4.2 Plant Regeneration from Induced Callus in PEG Stress Condition Resulting calli were excised, transferred, to jars containing 25ml MS basal salts medium supplemented with plant hormones and growth regulators as described by Zhao et al., (2010) for shoot initiation in conditions in which PEG (6000) (0, 0.5, 1.0, 1.5, 2.0 %) has been added. The incubation period was four weeks. The jars were placed in a growth chamber under fluorescent light and at an ambient temperature of 25 ± 2ºC. The medium was changed in 15 days and after four weeks, calli with clearly differentiated shoots were scored as regenerating callus. Rooting was initiated on MS medium supplemented with 3 mg l-1 indole-3-butyric acid (IBA) under the same conditions. Regenerating calli, showing shoot and root formations, were transferred to MS basal medium with no phytohormones to sustain growth of plantlets for four weeks. 21 3.5 Data Recorded and Statistical Analysis After the end of callus induction period callus induction efficiency (CIE) was recorded as the number of calli induced divided by total number of seeds cultured × 100. After four weeks of culturing the excised callus data were also taken for difference in callus fresh weight (CFW). In the mean time, embryogenic callus percent (ECP) was recorded as the number of embryogenic callus obtained divided by total number of induced callus X 100. Finally, at the end of plant regeneration, data for percentage plant regeneration (PRP) was recorded as the number of plantlets obtained divided by total number of embryogenic calli cultured × 100. After four weeks of incubation in MS basal medium with no phytohormones, plant parts above and below callus (shoot and roots) were harvested separately. Roots were washed free of culture media. Plant height above callus was measured from the surface of the culture media to the tip. Root length was also measured from the point shoot length was measured down to the tip. Root branching was measured by visual counting. Each plant part was oven dried at 70 oC for 24 h before weighing. From the measurements of shoot dry weight and root dry weight, root shoot dry weight ratio was computed. Data were analyzed using SAS software 9th Edition. The data analysis was carried out using analysis of variance for each parameter while the difference between the pair of treatment means was evaluated at 1% level of significance using Fischer’s LSD. 22 4. RESULT AND DISCUSSION 4.1 Callus Induction, Proliferation and Plant Regeneration 4.1.1 The Effect of PEG Induced Moisture Deficit on Callus Induction Efficiency (CIE) Sorghum genotypes exhibited highly significant (p<0.01) interaction with PEG stress levels for callus induction efficiency (Table 1). There was also highly significant (p<0.01) difference among the tested genotypes as well as the PEG treatments (Appendix Table 1 and 4). The PEG resulted in reduction in CIE of all genotypes with increasing level of PEG treatment, indicating sorghum genotypes are responding differently to PEG stress levels (Fig. 1). The total reduction in the CIE was quantified as the sum of simple effects (i.e. reduction in each PEG treatment level) (Table 1). A) Normal callus induction in the control B) Reduced callus induction in the 2% PEG Fig. 1 Callus induction difference due to PEG stress In variety Meko the PEG stress had lowest effect in mean CIE (1.11), followed by Seredo (2.23) with increasing level of PEG from 0 to 2% indicating their relative tolerance. The effect of PEG 23 treatment on Teshale and 76 T1#23 was nearly in the same magnitude (4.44), but in the later the reduction in CIE was more pronounced at 1.5% PEG level. Gubiye exhibited lower reduction in CIE (5.56.) than 76T1#23. Likewise, in Melkam and Gambella-1107 the reduction in CIE (8.89) due to the PEG stress was higher than 76T1#23, but the reduction in Gambella-1107 was more pronounced at 2% PEG level. In Abshir, Girana-1, ESH-2, and Hormat, the effect of the PEG stress in CIE (18.89) was higher than in Gambella-1107. Also in Macia, Birmash and Misikir, the reduction in CIE was nearly in the same magnitude (26.67), but higher than Gambella-1107. The highest effect of PEG on CIE (27.78) was observed on varieties Chelenko and Raya respectively which indicated the relative susceptibility of these genotypes to PEG stress treatments. Table 1: Mean callus induction efficiency (CIE) of genotypes for each PEG treatment level CIE (%) PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV LSD(p<0.01 0.0 53.33 62.22 86.66 48.89 64.44 61.11 56.67 80.00 60.00 35.56 63.33 54.44 48.89 40.00 52.22 61.11 13.39 12.22 0.5 51.11 52.22 82.22 42.22 58.89 57.78 50.00 78.89 41.11 34.44 57.78 53.33 46.67 36.67 51.11 58.89 1.0 47.78 42.22 77.78 37.78 58.89 58.89 37.78 78.89 33.33 28.89 50.00 51.11 48.89 33.33 46.67 57.78 1.5 48.89 36.67 72.22 34.44 56.67 56.67 34.44 77.78 38.89 30.00 38.89 48.89 42.22 25.56 36.67 57.78 2.0 40.00 (13.33) 24.44 (27.78) 58.89 (27.78) 30.00 (18.89) 58.89 (05.56) 52.22 (08.89) 30.00 (26.67) 78.89 (01.11) 33.33 (26.67) 33.33 (02.23) 36.67 (26.67) 45.56 (08.89) 44.44 (04.45) 22.22 (17.78) 36.67 (15.56) 56.67 (04.44) Numbers in parenthesis are total reductions in mean CIE across the PEG treatment levels 24 In the present experiment, PEG treatment has an effect on callus induction capacity of sorghum genotypes. The mean CIE decreased drastically in genotypes under higher PEG treatments than lower PEG treatments. Decrease in CIE is a typical response of explants of crop genotypes when subjected to PEG stress. In agreement with the result of this study, reduction in CIE has been reported in many cereal species. According to Matheka et al. (2008) who investigated in maize, Biswas et al. (2002) in rice, and Abdel-Ghany et al. (2004) in wheat, CIE declined with increasing PEG stress level. The observed significant reduction in callus initiation and genotypePEG treatment interaction is also in agreement with those observed by Wani et al., 2010. However, the response of CIE for PEG treatment was genotype dependent. The difference in decreasing trend in CIE of the genotypes might further explain difference in osmotic regulation among genotypes, which enables them to maintain osmotic balance to assist initiation of callus cells under severe stress conditions. According to Begum et al. (2011), in sugarcane, 5 % PEG treatment resulted in reduction of callus induction from 100 to 86% and the reduction differed in different genotypes. The same result has been reported by Ezatollah et al. (2012) in bread wheat and Wani et al. (2010) in rice. Again, such a decrease in CIE in response to PEG stress might be due to either water shortage which led to profuse mutation in cellular metabolism including protein functioning and alteration in amount of proteins (Plomion et al., 1999) or altered gene expression (Visser, 1994) controlling this trait or the genes may express themselves but the resultant proteins may be denatured due to increased stress. 4.1.2 The Effect of PEG Induced Moisture Deficit on Callus Fresh Weight (CFW) Sorghum genotypes exhibited highly significant (p<0.01) interaction with PEG stress levels for CFW (Table 2). There is also a highly significant (p<0.01) difference among the tested genotypes as well as the PEG treatments (Appendix Table 1 and 4). In all genotypes, effect of the PEG treatments resulted in decrease of the mean CFW with increasing level of the PEG from 0 to 2% (Fig. 2). The overall reduction in the CFW was quantified as the sum of simple effects of each PEG level. 25 A) Normal callus growth in the control B) Reduced callus growth in the 2% PEG Fig. 2 Callus growth difference due to PEG stress Variety Meko exhibited the lowest reduction in CFW (34.38) followed by Abshir (72.21), ESH-2 (77.44), 76T1#23 (93.56), Melkam (98.30), Girana-1 (100.39), Gambella-1107 (101.44), Macia (101.51), Teshale (105.56), Gubiye (116.82), Birmash (118.56) and Seredo (120.13). Misikir (121.30) and Chelenko (125.90) exhibited higher reduction in CFW. The greatest effect of PEG treatments on CFW was observed on Raya (128.56) and Hormat (143.83) than the other tested genotypes, indicating the highest damage to callus growth in these genotypes due to the PEG stress. 26 Table 2: Mean callus fresh weight (CFW) of genotypes for each PEG treatment level CFW (mg) PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76t1#23 ESH-2 Girana-1 Teshale CV LSD (P<0.01) 0.0 380.02 390.92 392.05 385.51 379.48 377.96 375.29 338.23 384.45 379.89 384.12 383.33 376.73 350.62 387.80 384.89 4.80 34.12 0.5 370.05 383.18 376.24 377.48 367.76 381.09 359.15 358.26 376.39 367.61 367.72 369.59 365.12 369.28 378.57 374.27 1.0 348.31 349.83 342.71 338.85 358.48 351.52 307.58 331.88 360.39 342.55 341.10 354.44 339.40 338.08 361.51 353.32 1.5 319.54 281.95 278.30 276.79 322.35 319.61 276.33 295.65 304.14 310.98 274.36 325.19 326.00 286.31 307.34 328.33 2.0 307.81 (072.21) 265.02 (125.90) 263.49 (128.56) 241.68 (143.83) 262.66 (116.82) 276.52 (101.44) 256.71 (118.56) 303.85 (034.38) 282.94 (101.51) 259.76 (120.13) 262.82 (121.30) 285.03 (098.30) 283.17 (093.56) 273.18 (077.44) 287.41 (100.39) 279.37 (105.56) Numbers in parenthesis are total reductions in mean CFW across the PEG treatment levels The major effect of PEG stress in callus growth is mainly observed in the form of decrease in CFW which is a typical response in callus tissue of many crop plants. In the callus cells of stressed genotypes, a significant reduction in CFW across the five PEG stress levels was found and the outcome is also in agreement with the results found in soybean (Sakthivelu et al., 2008), barley (Lührs and Lörz, 1987), wheat (Özgen et al., 1998), durum wheat (Lutts et al., 2004; Turhan and Baser, 2004) and rice (Khanna and Raina, 1998; Hoque and Mansfield, 2004; Khalequzzaman et al., 2005; Wani et al., 2010). Different genotypes respond differently to PEG treatment in terms of callus growth. The same result also exists in maize (Hamdy and Aref, 2002), and wheat (Abdelsamad et al., 2007). 27 Increasing water stress causes a progressive reduction in growth as expressed in callus fresh weight. Abdulaziz and Al-Bahrany (2002) studied the callus to varying degree of polyethylene glycol (PEG)-induced water stress. Their results revealed that increasing water stress induced by increasing concentration of PEG caused a progressive reduction in callus fresh weight. According to Sakthivelu et al. (2008), the addition of PEG to the MS medium decreased the water potential of the media inducing water stress that adversely affected the callus growth. Several other authors also reported the use of PEG for in vitro drought screening in various crop plants (Dragiiska et al., 1996; Ezatollah et al., 2012; Gopal and Iwama, 2007; Wani et al., 2010). Such a decrease in CFW in response to PEG stress might be due to water shortage which affects development and growth of cells. Cell division and cell growth are the two primary processes involved in increase of fresh weight. In general, cell division is considered to be less sensitive to drought when compared with cell enlargement or growth (Sakthivelu et al., 2008). However, both cell expansion and cell division can be influenced by relatively mild osmotic stress. Maintenance of cell turgor plays an important role in cell growth (Prasad and Staggenborg, 2008). Addition of PEG-6000 in solid media lowers water potential of the medium that adversely affect cell division leading to reduced callus growth (Ehsanpour and Razavizadeh, 2005; Sakthivelu et al., 2008). Generally, the results of this experiment agrees with previous reports in which genotypic differences in callus proliferation was reported to be genetically determined in some cereals including sorghum (Newton et al., 1986), barley (Lührs and Lörz, 1987), rice (Khanna and Raina, 1998; Hoque and Mansfield, 2004; Khalequzzaman et al., 2005), and wheat (Özgen et al., 1998; Galovic et al., 2005). 4.1.3 The Effect of PEG Induced Moisture Deficit on Embryogenic Callus Percent (ECP) The mean ECP of the tested genotypes in each PEG treatment level is presented on Table 3. There was a highly significant (p<0.01) PEG stress genotype interaction for ECP. The difference among PEG levels and the genotypes was also highly significant (P<0.01) (Appendix Table 1 and 4). In the entire genotypes mean ECP increased with increasing level of PEG treatment from 28 0 to 1.5% and declined at 2% PEG level. However, in varieties Hormat (1.73), ESH-2 (1.50), and Raya (1.40), there was an overall reduction in ECP, indicating the highest effect of PEG treatment on ECP of these genotypes. In Abshir (-0.06) and 76T1#23 (-0.07), slight increase in ECP was recorded. Melkam (-1.05), Seredo (-1.51), Misikir (-1.91), Gubiye (-2.08), Birmash (2.31), Teshale (-2.52), Macia (-2.60), Gambella-1107 (-2.89), and Chelenko (-3.17) exhibited higher level of increase in ECP in their respective order. The highest increase in ECP was attributed to varieties Girana-1(-3.34) and Meko (-3.88), which is an indication of lowest effect of PEG stress on embryogenic callus formation of these genotypes. Table 3: Mean embryogenic callus percent (ECP) of genotypes for each PEG treatment level ECP (%) PEG Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV LSD (p<0.01) 0.0 43.91 10.97 39.73 48.88 38.12 51.10 28.13 21.19 48.89 49.46 51.75 31.94 42.20 41.39 27.85 58.34 6.74 5.93 0.5 45.07 12.97 40.69 48.78 38.52 52.67 29.66 23.49 50.69 51.33 51.39 34.29 40.95 43.86 28.92 59.59 1.0 45.07 12.85 40.33 49.69 40.42 52.99 31.61 27.69 50.72 52.51 53.21 34.67 41.14 44.38 29.08 66.48 1.5 53.19 12.86 41.12 48.35 42.26 55.24 30.03 25.88 53.00 55.84 54.90 41.90 43.44 46.01 31.94 60.65 2.0 43.97 (-0.06) 14.14 (-3.17) 38.33 (1.40) 47.15 (1.73) 40.21 (-2.08) 54.00 (-2.89) 30.44 (-2.31) 25.07 (-3.88) 46.29 (-2.60) 50.96 (-1.51) 53.67 (-1.91) 33.00 (-1.05) 42.27 (-0.07) 39.89 (1.50) 31.19 (-3.34) 60.86 (-2.52) Numbers in parenthesis are total increase or reduction in mean ECP across the PEG treatment levels (“-“= Reduction) 29 In the results of the present experiment, PEG induced water deficit has an effect on ECP. Inconsistent variation in ECP was recorded among genotypes in response to the five PEG stress levels. The inconsistency could be attributed to the difference in genotypes' strategies and responses to the induced water deficit conditions. In contrast to report of Bozhkov and von Arnold (1998) and Luma and Al-Ka’aby (2011), the mean ECP increased in genotypes under mild PEG stress level. However, the results agree with those reported by Kim and Moon (2007), Iraqi and Tremblay (2001) and Lipvska et al. (2000) in which PEG treatment became very effective in inducing somatic embryos. Moon and Park (2008) also reported significant increase in embryogenesis more than doubling the average number of somatic embryos with doubling PEG concentration. PEG stress promotes embryogenesis by provoking osmotic stress (Kim and Moon, 2007, Iraqi and Tremblay, 2001, Lipvska et al., 2000). The presence of variation among genotypes also indicates that there is a possibility of improving the response of different genotypes to PEG induced water stress. These findings agree with those reported by Gandonou et al. (2005), Ather et al. (2009), Khan et al. (2009), Raza et al. (2010) in sugarcane, Khanna and Raina, (1998), Hoque and Mansfield, (2004), Khalequzzaman et al. (2005) in rice; Özgen et al., (1998) in wheat; and Lührs and Lörz, (1987) in barley in which significant difference in embryogenic callus production was observed. 4.1.4 The Effect of PEG Induced Moisture Deficit on Plant Regeneration Percent (PRP) The mean PRP of the PEG treatment X genotype interaction is given on Table 4, and the mean PRP of the PEG treatments and individual genotypes is presented in Appendix Table 1 and 4 respectively. Highly significant (p<0.01) PEG stress level x genotype interaction was recorded for PRP. The effect of PEG stress on PRP was observed in the form of reduction in mean PRP of all genotypes with increasing level of PEG from 0 to 2%. The total reduction in the PRP was quantified as the sum of simple effects of each PEG level. 30 A) Normal plant regeneration in the control B) Reduced plant regeneration in the 2% PEG Fig.3 Plant regeneration difference due to PEG stress The highest effect of the PEG stress in PRP was recorded in variety Chelenko (26.39). In Raya (23.81) and Girana-1 (23.61) the effect of PEG in PRP was of the same trend and lower than in Chelenko. Macia (21.11), Hormat (20.73), ESH-2 (20.04), Melkam (19.91), Misikir (19.25), 76T1#23 (19.05), Seredo (18.81), Abshir (17.91), Meko (17.50), and Gubiye (16.47) in their respective order exhibited decreased plant regeneration due to PEG stress. In Gambella-1107 (11.94), Birmash (11.94) and Teshale (13.33), PEG treatment imposed the lowest reduction in PRP indicating that these genotypes are the least affected by PEG treatment in terms of plant regeneration. 31 Table 4: Mean plant regeneration percent (PRP) of genotypes for each PEG treatment level PRP (%) PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Miskir Melkam 76t1#23 ESH-2 Girana-1 Teshale CV LSD(P<0.01) 0.0 31.75 36.31 36.31 33.23 28.97 24.44 24.44 30.00 35.00 31.31 31.75 31.11 31.55 33.14 36.11 30.00 20.58 9.29 0.5 24.60 28.97 28.97 22.22 17.778 24.44 20.00 23.33 28.33 24.83 26.11 27.68 23.81 27.381 30.83 25.00 1.0 18.89 23.41 23.41 20.00 16.667 18.89 13.89 21.67 21.67 20.14 19.76 23.33 18.65 16.67 24.07 20.83 1.5 16.67 16.39 16.39 16.89 13.89 15.28 13.89 17.78 17.50 16.43 14.48 14.48 17.64 14.48 14.29 20.83 2.0 13.83 (17.91) 12.50 (26.39) 12.50 (23.81) 12.50 (20.73) 12.50 (16.47) 12.50 (11.94) 12.50 (11.94) 12.50 (17.50) 13.89 (21.11) 12.50 (18.81) 12.50 (19.25) 11.20 (19.91) 12.50 (19.05) 13.09 (20.04) 12.50 (23.61) 16.67 (13.33) Numbers in parenthesis are total reductions in mean PRP across the PEG treatment levels The results of the present study showed that an increment in PEG stress level caused reduction of PRP in sorghum genotypes which is a typical response of callus cells of many plants. The mean PRP drastically decreased in some genotypes exposed to PEG stress. The decreasing trend of PRP with increasing level of PEG stress is found to be in agreement with those reports in many cereals like in rice (Biswas et al., 2002; Wani et al., 2010), wheat (Barakat and Abdel-Latif, 1995) and sorghum (Smith et al., 1985). According to Wani et al. (2010), supplementing a month old embryogenic calli with 0, 0.5, 1.0, 1.5, 2.0% PEG (6000) for two cycles each of two weeks decreased percent plant regeneration while there was normal plant regeneration in the nostress medium. Moreover, Smith et al. (1985) used elevated concentration of PEG during callus growth and it resulted in no plant regeneration in sorghum. 32 In the current study different sorghum genotypes responded to PEG treatment differently indicating the genotypic variability. In agreement with the result of this study, genotypic variability in PRP has been reported in many plant species (Yadav et al., 2000; Yadav and Chawla, 2001; Schween and Schwenkel, 2003; Galovic et al., 2005; Sakthivelu et al., 2008; Begum et al., 2011). The typical decrease in plant regeneration in callus cells of crop plants in response to water stress is due to water shortage in the cells which leads to a decrease in cell turgor and eventually cell growth. Addition of PEG-6000 in culture media lowers water potential of the medium that affect cell division leading to reduced callus growth and consequently influences regeneration (Ehsanpour and Razavizadeh, 2005; Sakthivelu et al., 2008) 4.2 Morpho-physiological Study of Regenerated Plants 4.2.1 The Effect of PEG Induced Moisture Deficit on Coleoptile Length (CL) Sorghum genotypes exhibited highly significant (p<0.01) interaction with PEG stress levels for CL (Table 5). There was also a highly significant (p<0.01) difference among the tested genotypes as well as the PEG treatments (Appendix Table 2 and 5). The PEG treatment reduced mean CL in all genotypes with increasing level from 0 to 2%. The total reduction in the CL was the sum of simple effects of each PEG level. In varieties Hormat (6.30) and Abshir (6.20) the effect of the PEG treatment was highest and hence, highest reduction in CL was observed. Gubiye (5.97), ESH-2 (5.93), Birmash (5.90), Gambella-1107 (5.83), Chelenko (5.73), Misikir (5.63), Macia (5.60), Seredo (5.57), Raya (5.47), Girana-1 (5.33), Melkam (5.27), and Meko (5.00) in their respective order exhibited reduction in CL. The least effect of PEG treatment on CL was attributed to 76T1#23 (4.83) and Teshale (4.13). 33 Table 5: Mean coleoptile length (CL) of genotypes for each PEG treatment levels CL (cm) PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV LSD (P<0.01) 0.0 16.67 15.17 15.10 14.77 14.03 14.20 14.43 14.30 16.63 18.57 14.53 19.30 14.50 14.50 14.73 16.43 10.85 4.32 0.5 15.63 13.87 13.93 13.33 12.87 12.93 12.70 12.87 15.27 17.17 13.23 18.03 13.50 13.23 19.57 16.50 1.0 14.57 12.63 12.47 11.77 11.50 11.50 11.33 11.53 13.93 15.60 11.73 17.70 12.37 11.67 12.50 14.80 1.5 12.90 11.03 10.93 10.00 09.90 09.77 09.97 10.30 12.37 14.37 10.17 15.40 11.20 10.20 10.60 13.40 2.0 10.47 (6.20) 09.43 (5.73) 09.63 (5.47) 08.47 (6.30) 08.07 (5.97) 08.37 (5.83) 08.53 (5.90) 09.30 (5.00) 11.03 (5.60) 13.00 (5.57) 08.90 (5.63) 14.03 (5.27) 09.67 (4.83) 08.57 (5.93) 09.40 (5.33) 12.30 (4.13) Numbers in parenthesis are total reductions in mean CL across the PEG treatment levels In the present experiment, PEG induced water deficit has an effect on coleoptile elongation. With increasing PEG level CL reduced in all tested genotypes due to the PEG stress. According to Shao et al. (2008) decreases in morphological traits are also common responses of crop plants when subjected to osmotic stress. The decrease in the traits of the genotypes explains difference in osmotic regulation, which enables them to maintain cell turgor to assist growth under severe stress conditions. The variability in the decreasing trend of the genotypes will indicate the genotypic variability in response to water deficit stress. The findings of the present study were in line with some earlier studies where water stress reduced shoot length in wheat (Kamran et al., 2009), maize (Ali et al., 2007), corn (Parmer and 34 Moore, 1966), and pearl millet (Radhouane, 2007) genotypes. Apart from highly significant water deficit genotype interaction observed in this study, the reduction in coleoptile elongation was also genotype dependent and this is also found to be in agreement to those reported by Raziuddin et al. (2010) in wheat, Abuhay, (2000) and Ambika et al. (2011) in sorghum. Reduced CL was observed in PEG-induced stress since PEG may interfere with water absorption which leads to reduced cell division and growth. When plants experience drought stress, shoot growth is arrested in response to changes in internal water status (Simonneau et al., 1993). 4.2.2 The Effect of PEG Induced Moisture Deficit on Root Length (RL) Sorghum genotypes exhibited highly significant (p<0.01) interaction with PEG stress levels for RL (Table 6). There is also a highly significant (p<0.01) difference among the tested genotypes as well as the PEG treatments (Appendix Table 2 and 5). The mean RL in all genotypes decreased with increasing level of PEG from 0 to 2%. The total decrement in the RL was quantified as the sum of simple effects of each PEG level. In varieties Seredo (0.23), 76T1#23 (0.53), Abshir (0.60), Chelenko (0.70), and Meko (0.87) respectively lowest effect of PEG stress on RL was observed. Likewise, in Raya (0.97) and Birmash (0.97), mean RL was reduced in the same magnitude due to the PEG treatments, but in the latter the reduction was more pronounced above 1.5% PEG level. Similarly, in Teshale (1.03) and Melkam (1.03) the reduction in mean RL is of the same magnitude but in the latter the reduction is more pronounced above 1.5% PEG level. Gambella-1107 (1.17), Misikir (1.30), Hormat (1.40), and Gubiye (1.47) also exhibited higher reduction in mean RL. The highest effect of PEG stress and consequently the highest reduction in mean RL was observed in Macia (1.50), ESH-2 (1.50), and Girana-1 (2.23). 35 Table 6: Mean root length (RL) of genotypes for each PEG treatment levels RL(cm) PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV LSD (P<0.01) 0.0 6.70 5.10 4.13 4.80 7.50 7.60 4.50 6.60 5.30 6.47 5.63 7.33 4.43 5.53 5.70 7.27 6.86 0.78 0.5 6.63 4.80 4.07 4.50 7.37 7.43 4.27 6.23 4.97 7.33 5.30 7.23 4.50 5.23 4.60 7.17 1.0 6.50 4.67 3.70 4.20 7.17 6.96 4.07 6.10 4.73 6.73 4.97 6.73 4.37 4.70 2.27 6.80 1.5 6.20 4.60 3.33 3.57 6.80 6.67 3.80 6.07 4.47 6.53 4.60 6.50 4.10 4.40 3.70 6.40 2.0 6.10 (0.60) 4.40 (0.70) 3.17 (0.97) 3.40 (1.40) 6.03 (1.47) 6.43 (1.17) 3.53 (0.97) 5.73 (0.87) 3.80 (1.50) 6.23 (0.23) 4.33 (1.30) 6.30 (1.03) 3.90 (0.53) 4.03 (1.50) 3.47 (2.23) 6.23 (1.03) Numbers in parenthesis are total reductions in mean RL across the PEG treatment levels In the genotypes scrutinized, reduction in RL across the five PEG stress levels was found. The findings of the present study are similar to some earlier studies where water stress reduced RL in cereals (Kamran et al., 2009 and Ali et al., 2007). Comparable results have been reported by various authors like Parmer and Moore (1966) in corn and Radhouane (2007) in pearl millet. The decreasing trend in RL in crop plants under moisture deficit is due to many factors. Root growth decreases when moisture deficit stress occurs during seedling stage, mainly because of decreased carbon partitioning to roots (Batts et al., 1998). In contrast, the response of root growth to drought can be variable; under moderate moisture stress, root growth can be greater because of increased partitioning of carbohydrates to roots, whereas, severe drought often limits root growth (Prasad et al., 2008). The extent and pattern of root development are closely related 36 to the ability of the plant to absorb water and the tolerant genotypes have higher capacity of this character. Price et al. (1997) reported that root growth is an important component of the adaptation of rice genotypes to water deficit. Correspondingly, Nagarajan and Rane (2000) recorded decreased RL in response to water stress. The stressed sorghum genotypes exhibited significant difference in RL. The result was however in contrast with Addisie (2010) in which water-stressed plants of sorghum genotypes tended to produce less RL, but the accessions did not differ significantly in overall. 4.2.3 The Effect of PEG Induced Moisture Deficit on Shoot Dry Weight (SDW) Sorghum genotypes exhibited highly significant (p<0.01) interaction with PEG stress levels for SDW (Table 7). There was also highly significant (p<0.01) difference among the tested genotypes as well as the PEG treatments (Appendix Table 3 and 6). The mean SDW in all genotypes decreased with increasing level of PEG from 0 to 2%. The total reductions in the SDW are the sum of simple effects of each PEG level. The lowest effect of PEG stress was recorded in variety 76T1#23 (0.02), followed by Girana-1 (0.06), Misikir (0.06), and Gambella1107 (0.08) for SDW. Teshale (0.08), Birmash (0.09), Macia (0.10), Meko (0.11), Gubiye (0.11), ESH-2 (0.12), Melkam (0.12), Abshir (0.14), and Hormat (0.16) exhibited higher reduction in SDW due to the PEG stress. The highest effect of the PEG stress was recorded in Raya (0.18), Chelenko (0.36) and Seredo (0.44) respectively, indicating the relative susceptibility of the genotypes to the induced moisture stress. 37 Table 7: Mean shoot dry weight (SDW) of genotypes for each PEG treatment level SDW(mg) PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Miskir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV LSD (P<0.01) 0.0 1.87 1.98 1.83 1.63 1.65 1.65 1.64 1.67 1.69 2.38 1.63 2.26 1.64 1.64 1.64 1.97 3.39 0.12 0.5 1.84 1.73 1.82 1.61 1.63 1.63 1.61 1.62 1.66 2.05 1.61 2.23 1.57 1.58 1.62 1.95 1.0 1.82 1.64 1.75 1.52 1.59 1.59 1.56 1.59 1.63 2.01 1.55 2.17 1.55 1.55 1.59 1.89 1.5 1.75 1.61 1.68 1.49 1.54 1.57 1.53 1.57 1.59 1.99 1.53 2.15 1.55 1.55 1.54 1.87 2.0 1.66 (0.14) 1.59 (0.36) 1.57 (0.18) 1.44 (0.16) 1.49 (0.11) 1.54 (0.08) 1.51 (0.09) 1.54 (0.11) 1.56 (0.10) 1.93 (0.44) 1.55 (0.06) 2.11 (0.12) 1.51 (0.02) 1.52 (0.12) 1.53 (0.06) 1.86 (0.08) Numbers in parenthesis are total reductions in mean SDW across the PEG treatment levels The results of the present study showed that an increment in PEG stress level caused a significant decrease of SDW. Decrease in SDW is a common response of crop plants when subjected to moisture deficit stress. The variability in the decreasing trend of the trait explains difference in osmotic regulation of the genotypes, which enables them to maintain cell turgor to assist growth under severe moisture deficit conditions (Shao et al., 2008). SDW decreases manly due to increased partitioning of solutes to the root (Prasad et al., 2008). In the genotypes tested, reduction in SDW across the PEG stress levels was found and the outcome is also in agreement with Ramu et al. (2008) and Addisie (2010). The variation in SDW under different drought stress conditions would help to screen tolerant accessions from sensitive 38 ones because tolerant genotypes have less reduction in SDW than susceptible ones under water stress conditions (Salem, 2003). The present study showed significant PEG treatment X genotype interaction in terms of SDW which is in contradiction with Abuhay (2000). The possible reason for the contradicting result might be the experimental set up used in this study might be the variation in experimental set up and environment employed in this study. In this study, osmotic stress of PEG rather than soil moisture deficit was used for inducing water deficit stress. Moreover, the study was conducted in controlled environment. 4.2.4 The Effect of PEG Induced Moisture Deficit on Root Dry Weight (RDW) In terms of RDW, sorghum genotypes also exhibited highly significant (p<0.01) interaction with PEG stress levels (Table 8). Highly significant (p<0.01) difference among the tested genotypes as well as the PEG treatments (Appendix Table 3 and 6) was also observed. RDW decreased across each PEG treatment level and the total reduction was quantified as the sum of simple effects of each PEG treatment level. Variety 76T1#23 (0.027) revealed lowest reduction in mean RDW with increasing level of PEG stress. In Gambella-1107 and Girana-1, RDW reduced in the same magnitude (0.033), but in the earlier the reduction was more intense after 1 % PEG level. Also in Macia (0.034), Teshale (0.036), Hormat (0.036), Meko (0.043), Raya (0.047), Gubiye (0.047), Seredo (0.051), ESH-2 (0.057), and Melkam (0.058) PEG stress caused higher reduction in RDW in their respective order. The highest reduction was recorded in varieties Birmash (0.060), Misikir (0.060), Chelenko (0.063) and Abshir (0.091) respectively which indicates the highest damage to RDW in the genotypes due to the PEG stress. 39 Table 8: Mean root dry weight (RDW) of genotypes for each PEG treatment level RDW(mg) PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76t1#23 ESH-2 Girana-1 Teshale CV LSD (P<0.01) 0.0 0.52 0.48 0.47 0.46 0.47 0.46 0.46 0.47 0.48 0.59 0.43 0.64 0.47 0.45 0.45 0.56 3.27 0.03 0.5 0.49 0.46 0.46 0.45 0.46 0.46 0.45 0.44 0.47 0.55 0.41 0.62 0.46 0.43 0.44 0.56 1.0 0.47 0.43 0.43 0.44 0.44 0.43 0.42 0.43 0.46 0.54 0.38 0.59 0.45 0.41 0.43 0.53 1.5 0.44 0.41 0.40 0.41 0.41 0.39 0.41 0.43 0.44 0.52 0.37 0.55 0.45 0.40 0.42 0.52 2.0 0.39 (0.091) 0.39 (0.063) 0.39 (0.047) 0.39 (0.036) 0.39 (0.047) 0.38 (0.033) 0.39 (0.06) 0.42 (0.043) 0.42 (0.034) 0.53 (0.051) 0.36 (0.06) 0.54 (0.058) 0.44 (0.027) 0.39 (0.057) 0.41 (0.033) 0.51 (0.036) Numbers in parenthesis are total reduction in mean RDW across the PEG treatment levels According to Rhodes and Samara (1994), a means of increasing drought tolerance is by decreasing osmotic potential by accumulation of solutes. Generally plants accumulate some kinds of organic and inorganic solutes in the cytosol to raise osmotic pressure and thereby maintain both turgor and the driving gradient for water uptake. Under mild drought stress, pattern of resource allocation generally root growth is favored rather than shoot growth. Severe stress conditions often decrease root growth (Batts et al., 1998). Prasad et al. (2008) found that timing of drought stress has great influence on partitioning of carbohydrates. Drought Stress occurring during early growth stage shifts partitioning to the roots. In addition, Seghatoleslami et al. (2008) observed that the major effect of water stress is mainly expressed in the form of increase in RDW. However, in the result of current study decreasing 40 trend in RDW was observed. The possible reason for the decreasing trend of RDW observed in this study might be the growth environment employed in this study. For the genotypes to store significant carbohydrate to the roots, they have to accumulate solutes through photosynthesis. In this study, the required nutrients were supplied through culture media; the plants were not exposed to natural sun light and the experiment was quitted in 30 days. In some previous investigations, decrease of RDW across water deficit stress levels was reported. Therefore, the decrease in RDW of the studied genotypes across water deficit levels is in line with Ramu et al. (2008) and Addisie (2010). The dissimilarity in RDW under different drought stress conditions would help to screen tolerant genotypes from sensitive ones (Salem, 2003). 4.2.5 The Effect of PEG Induced Moisture Deficit on Root to Shoot Dry Weight Ratio (RSDW) For RSDW sorghum genotypes exhibited highly significant (p<0.01) interaction with PEG stress levels (Table 9). There was also highly significant (p<0.01) difference among the tested genotypes as well as the PEG treatments (Appendix Table 3 and 6). The mean RSDW in all genotypes decreased, except in varieties Chelenko and Seredo with increasing level of PEG from 0 to 2%. Variety Chelenko (0.003) and Seredo (0.019) exhibited a slight overall increase in RSDW, whereas slight reduction was recorded in Raya (0.003), Meko (0.008), and 76T1#23 (0.011). Correspondingly, in Teshale (0.011), Girana-1 (0.012), Hormat (0.013), Macia (0.013), ESH-2 (0.019), Gubiye (0.021), Birmash (0.021), and Melkam (0.027) exhibited higher reduction in RSDW. The highest reduction in RSDW was attributed to Gambella-1107 (0.029), Misikir (0.031), and Abshir (0.041), which indicates that the genotypes are highly sensitive to PEG-induced moisture deficit. 41 Table 9: Mean root shoot weight ratio (RSDW) of genotypes for each PEG treatment level RSDW (mg) PEG Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV LSD (P<0.01) 0.0 0.275 0.24 0.255 0.282 0.283 0.280 0.279 0.281 0.281 0.253 0.261 0.284 0.286 0.274 0.277 0.285 3.86 0.02 0.5 0.266 0.264 0.255 0.278 0.281 0.279 0.281 0.273 0.285 0.267 0.252 0.278 0.291 0.272 0.271 0.284 1.0 0.258 0.264 0.243 0.292 0.279 0.271 0.268 0.272 0.284 0.266 0.247 0.271 0.284 0.264 0.270 0.282 1.5 0.248 0.254 0.240 0.275 0.269 0.249 0.270 0.272 0.274 0.262 0.244 0.255 0.287 0.260 0.270 0.276 2.0 0.234 (-0.041) 0.245 (+0.003) 0.252 (-0.003) 0.270 (-0.013) 0.262 (-0.021) 0.251 (-0.029) 0.258 (-0.021) 0.273 (-0.008) 0.268 (-0.013) 0.273 (+0.019) 0.231 (-0.031) 0.257 (-0.027) 0.275 (-0.011) 0.255 (-0.019) 0.265 (-0.012) 0.274 (-0.011) Numbers in parenthesis are total reductions or increase in mean RSDW across the PEG treatment levels (“+“=increase) Prasad et al. (2008) found that timing of drought stress has great influence on partitioning of carbohydrates. If drought stress occurs during early vegetative growth stages, the partitioning shifts toward roots rather than shoots, which ends up in increased RSDW. Therefore, the outcome is mainly due to decreased shoot weight rather than increased root weight. In addition, Seghatoleslami et al. (2008) observed that the major effect of water stress is mainly expressed in the form of increase in RDW. 42 However, in the result of current study decreasing trend in RSDW was observed. The possible reason for the decreasing trend of RSDW observed in this study might be the result of decrease in RDW. RSDW decreased because it is a function of RDW. In the genotypes investigated, reduction in RSDW across the PEG stress levels was found and the outcome is also in agreement with Ramu et al. (2008) and Addisie (2010). The variability in decreasing trend of RSDW under different drought stress conditions would practically assist in screening tolerant accessions from sensitive ones (Salem, 2003).The significant PEG treatment X genotype interaction in terms of RSDW seen in this study contradicts the results obtained by Abuhay (2000). In this study, the tested sorghum genotypes showed significant difference in terms of RSDW, and this is also in contrast to Abuhay (2000). The possible reason for the contradicting results might be the experimental set up used in this study might be the variation in experimental set up and environment employed in this study. 4.2.6 The Effect of PEG Induced Moisture Deficit on Root Number (RN) The mean RN in each PEG treatment level, genotypes and main PEG treatments is given in Table 10 and Appendix Table 2 and 5 respectively. Highly significant (p<0.01) PEG X interaction with genotypes for RN was observed. The average RN increased with increasing level of PEG treatment in each variety. Variety Abshir exhibited the highest increase in RN (12.00) with increasing level of PEG treatment followed by Melkam (11.00). In Gubiye, Gambella-1107, Birmash, and Macia, increase in RN was 7.33 for each. ESH-2 (6.67), Misikir (6.00), 76T1#23 (6.00), Teshale (5.33), Seredo (5.00), Raya (4.33), Chelenko (3.33), and Hormat (3.33) respectively exhibited lower RN than variety Birmash. The lowest increase in RN was attributed to Meko (3.00) and Girana-1(2.67) respectively indicating that elevated PEG level triggered lowest root branching in these genotypes. 43 Table 10: Mean root number (RN) of genotypes for each PEG treatment level RN PEG (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV LSD (P<0.01) 0.0 22.67 25.33 17.00 21.00 19.33 20.33 17.33 18.00 14.00 26.33 19.66 27.00 13.00 17.33 19.33 21.33 11.23 5.52 0.5 24.00 26.67 17.67 19.67 20.67 22.00 20.33 18.66 16.66 26.00 20.00 27.00 16.00 21.33 20.33 22.67 1.0 28.00 29.33 18.67 21.00 23.67 24.33 22.00 22.00 16.67 27.00 20.00 34.00 16.00 20.33 20.67 24.33 1.5 31.00 25.67 22.00 21.67 24.67 26.00 22.00 24.33 19.33 29.00 23.67 35.33 17.00 21.33 24.00 26.00 2.0 34.64 (12.00) 28.66 (03.33) 21.33 (04.33) 24.33 (03.33) 26.66 (07.33) 27.67 (07.33) 24.66 (07.33) 26.00 (03.00) 21.33 (07.33) 31.33 (05.00) 25.66 (06.00) 38.00 (11.00) 19.00 (06.00) 24.00 (06.67) 25.33 (02.67) 28.33 (05.33) Numbers in parenthesis are total increase in mean RN across PEG treatment levels Genotypes showed increase in RN across increasing PEG stress levels which is in agreement with Forster et al. (2004) in barley. Abd Allah et al. (2011) also reported that water deficit favors the growth of seminal and lateral roots in seedlings of rice. There was increase in RN with increasing water deficit treatment. The results obtained in this study are also in agreement with Begum et al. (2011) who reported that root initiation on culture media supplemented with different level of PEG increased RN in sugarcane after one week. The RN was highest in tolerant genotypes and lowest in susceptible ones. 44 Such an increase in RN in response to PEG induced water stress might be due to limited water up take by the amount of roots in a particular volume of growth media (Passioura, 2002) and enhanced root branching can reduce drought stress The ability to maintain a variable root number among sorghum accessions may contribute to the crop drought tolerance; since, RN is among root characteristics that are responsible for adaptability to water stress (Abdallah, 2009). 4.3 Association between In vitro Traits Callus induction efficiency (CIE) had positive significant correlation with traits such as CFW, PRP, CL, and RL (Table 11). In contrast, CIE showed a significant negative correlation with ECP and RN. It also exhibited non-significant relation with SDW, RDW, and RSDW. CFW exhibited strong positive correlation with PRP and also positively associated with CL, RL, SDW, RDW, and RSDW. However, it was negatively correlated with RN. No significant correlation was observed between CFW and ECP. ECP had strong positive correlation with PRP and also positively correlated with RL, SDW, and RDW. In contrast, no significant correlation was observed between ECP and CL, RSDW, and RN. PRP showed positive correlation with CL, RL, SDW, RDW, and RSWR, but negatively correlated with RN. CL also revealed positive correlation with RL, SDW, RDW, and RSDW, but no correlation with RN. RL exhibited positive correlation with SDW, RDW, RSDW, and RN. Likewise, SDW showed positive relation RDW and RN, but no relation with RSDW. RDW revealed positive correlation with RSDW and RN. Finally RSDW exhibited negative correlation with RN. 45 Table 11: Correlation coefficient (r) of measured traits (P<0.05) CIE CFW ECP PRP CL RL SDW RDR RSDW CIE 1 CFW 0.349* 1 ECP -0.125* 0.001 1 PRP 0.332* 0.731* 0.783* 1 CL 0.162* 0.626* 0.041 0.549* 1 RL 0.257* 0.341* 0.259* 0.200* 0.357* 1 SDW 0.069 0.328* 0.110* 0.322* 0.596* 0.480* 1 RDW 0.099 0.451* 0.140* 0.387* 0.653* 0.546* 0.873* 1 RSDW 0.064 0.336* 0.070 0.203* 0.225* 0.188* -0.075 0.413* 1 RN -0.188* -0.326* -0.045 -0.385* -0.045 0.326* 0.398* 0.231* -0.312* CIE=Callus induction efficiency CFW=Callus fresh weight ECP=Embryogenic callus percent PRP=Plant regeneration percent CL=Coleoptile length RL=Root length SDW=Shoot dry weight RDW=Root dry weight RSDW=Root shoot dry weight ratio RN=Root number 46 RN 1 The present investigation revealed that CIE is positively correlated with PRP which is in agreement to Malahat (2001) in which the number of regenerated plants was observed to be determined by callus induction. This suggests that genotypes with high callus induction also caused an increase in the number of plants obtained from regeneration medium. In the present study, CIE was negatively correlated with ECP which is in contrast to Gandonou et al. (2005) who found no correlation between CIE and ECP. The possible reason might be the incorporation of PEG stress in this study the effect of which was observed in the form of decrease in CIE, but a slight increase in ECP. The presence of significant correlation between callus induction frequency and regeneration capacity of callus might indicate that callus induction and regeneration capacity may be controlled by the same mechanisms. The result also exhibited positive relation between ECP and PRP which is also in agreement with Gandonou et al. (2005). The highly significant and strong correlation observed between the ability of cultivars to produce embryogenic callus and their capacity for regeneration indicate that embryogenic callus percentage constitute a good index for callus ability to regenerate later on plantlets. The cultivars that presented high embryogenic callus percentages at the first weeks of culture have high chance to regenerate plants after several weeks of culture. Positive correlation between SDW and RDW is also found to be in agreement with those reported by Ali et al. (2009) in sorghum. In those reports, RL and RSDW were also positively associated. Dhanda et al. (2004) revealed positive association of RL with CL which is in agreement with the results of this study, negative correlation with RSDW in wheat which is in contrast to the result of this study. Moreover, Matsuura et al. (1996) reported a positive correlation between drought tolerance and root length in sorghum and millet. This suggested that these characters could be selected simultaneously with their positive effects on drought tolerance in different stages of crop growth in sorghum. 4.4 Mann–Whitney–Wilcoxon Rank Sum Test of the Measured Traits To determine the most desirable drought tolerant genotypes based on all traits measured, mean rank sum method was used according to Ezatollah et al., (2012). In this method, all the indices mean rank and standard deviation of ranks of all in vitro drought tolerance criteria were 47 calculated and summed (RS) (Table 12). Based on this criterion the most desirable drought tolerant genotypes were identified. 48 Table 12: Rank sum of all traits measured Variety CIE CFW ECP PRP CL RL SDW RDW RSDW RN Rank Mean Rank SD RS Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76t1#23 ESH-2 Girana-1 Teshale 08 15 16 11 05 07 13 01 12 02 14 06 04 10 09 03 02 14 15 16 10 07 11 01 08 12 13 05 04 03 06 09 12 03 13 15 07 04 06 01 16 09 08 10 11 14 02 05 06 16 15 12 04 02 03 05 13 07 09 10 08 11 14 01 15 10 06 16 14 11 12 03 08 07 09 04 02 13 05 01 03 04 06 12 13 10 07 05 14 01 11 09 02 15 16 08 12 15 14 13 09 04 06 08 07 16 03 11 01 10 02 05 16 15 08 06 09 02 13 07 04 10 14 12 01 11 03 05 16 01 03 06 11 14 12 04 09 02 15 13 05 10 07 06 9.1 10.6 10.8 12.1 08.5 06.5 08.8 05.0 09.7 07.7 10.4 08.2 04.7 10.4 08.0 05.3 5.88 5.76 4.64 3.63 3.72 4.06 3.77 4.29 3.86 4.90 3.72 3.71 3.53 3.47 5.54 3.09 14.98 16.36 15.44 15.74 12.22 10.56 12.57 09.29 13.56 12.60 14.12 11.91 08.23 13.88 13.54 08.39 01 13 12 14 03 04 05 15 06 11 08 02 09 07 16 10 CIE=Callus induction efficiency CFW=Callus fresh weight ECP=Embryogenic callus percent PRP=Plant regeneration percent CL=Coleoptile length RL=Root length SDW=Shoot dry weight RDW=Root dry weight RSDW=Root shoot dry weight ratio RN=Root number SD=Standard deviation RS=Rank Sum 49 By taking in to consideration all indices, genotypes: 76T1#23(RS= 8.23) and Teshale (RS= 8.39) followed by genotypes: Meko (RS= 9.29), Gambella-1107(RS= 10.56) and Melkam (RS=11.91) were the most drought tolerant genotypes, respectively. While genotypes: Chelenko (RS =16.36), Hormat (RS = 15.74) and Raya (RS= 15.44) were the most sensitive to drought, therefore they are recommended for crossing and genetic analysis of drought tolerance using diallel mating design or generation mean analysis and also for the QTL (quantitative trait loci) mapping and marker assisted selection. The same procedures have been used for screening quantitative indicators of drought tolerance in wheat, maize, and in rye by Mohammadi et al. (2011) and Ezatollah et al. (2012). . The detection of superior genotypes 76T1#23, Teshale, Meko, Gambella-1107 and Melkam for drought tolerance at cellular level together with their high potential for callus induction leads to the conclusion that a hybridization breeding procedure using these superior plant materials supplemented with in vitro selection for drought tolerance might be beneficial for improving these traits in sorghum. Hence, callus culture can be useful to speed up sorghum improvement. 50 5. SUMMARY AND CONCLUSION The present investigation was aimed to evaluate the relative tolerance of different sorghum genotypes for drought tolerance with respect to callusing, callus growth, embryogenic callus formation, plant regeneration and various morpho-physiological traits. To achieve the objectives, 16 elite sorghum genotypes were taken and laboratory experiment was conducted in tissue culture laboratory of Melkassa Agricultural Research Center. PEG 6000 was used as in vitro drought inducer. The experiment was laid down in factorial experiment with CRD design with three replications. MS media (Murashige and Skoog, 1962) supplemented with plant hormones and growth regulators were used for callusing, embryogenic callus formation, and plant regeneration. The growth of the regenerated plants was sustained on MS basal medium with no phytohormones. Measurements on callusing, callus proliferation, embryogenic callus formation, plant regeneration and growth performance of the regenerated plants were made in PEG stress condition. There was also highly significant (p<0.01) PEG stress genotype interaction for CIE, CFW, ECP, PRP, CL, RL, SDW, RDW, RSDW, and RN. In all genotypes, all traits decreased with increasing level of PEG from 0 to 2% except ECP and RN. ECP exhibited slight inconsistency in response to PEG treatments, whereas mean RN increased with increasing level of PEG treatment. In terms of CIE, varieties Meko, Seredo, and Teshale found to be tolerant to PEG induced moisture stress. Varieties Meko, Abshir, and ESH-2 found to be tolerant to PEG induced moisture stress in terms of CFW. Slight decrease in ECP in varieties Hormat and ESH-2, observed while there was general increment in mean CIE in all other genotypes. Varieties Meko, Girana-1, and Chelenko exhibited higher tolerance in terms of ECP. Sorghum varieties Teshale, Gambella-1107, Birmash revealed highest capacity of plant regeneration under PEG stress. Under PEG stress, varieties Teshale, 76T1#23, and Meko exhibited higher coleoptiles elongation indicating the relative tolerance of the genotypes. In terms of RL, Seredo, 76T1#23, Abshir exhibited higher tolerance than the tested genotypes. Varieties 76T1#23, Girana-1, and Misikir had relatively higher SDW, whereas 76T1#23, Gambella-1107, and Girana-1 revealed higher RDW under the PEG stress. On the other hand, varieties Chelenko, Seredo and Raya had higher RSDW, while Abshir, Melkam, and Gubiye exhibited higher mean RN under PEG stress. The 51 correlation analysis revealed strong positive association between ECP and PRP. SDW and RDW were also revealed strong positive correlation. By taking in to consideration all indices measured in this study, Mann–Whitney–Wilcoxon Rank Sum test revealed varieties 76T1#23 and Teshale followed by genotypes Meko, Gambella-1107 and Melkam were the most drought tolerant genotypes, respectively. On the contrary, genotypes: Chelenko, Hormat and Raya were the most sensitive to drought. In conclusion, the results of the present study pointed out the need for using in vitro screening when evaluating drought tolerance of sorghum accessions. Under in vitro water deficit condition the accessions demonstrated variation in response to all of the measured parameters under osmotic water stress at cellular level. The genotypes demonstrated variation in response to most of measured parameters at plant level. Moreover, genotypes which are recommended for drought prone areas appeared to be tolerant at cellular and early plant growth stage. Thus, the variations elucidated the existing genotypic difference among sorghum genotypes in response PEG induced water deficit stress. In consideration to all indices, sorghum genotypes: 76T1#23, Teshale, Meko, Gambella-1107 and Melkam appeared to be more tolerant for PEG induced drought stress than all genotypes tested. The results also showed that sorghum accessions present a remarkable array of similar behaviors in response to PEG induced water stress conditions. Therefore, this indicates that the traits are recommendable as potential screening tools for drought stress in sorghum under in vitro condition. On the basis of the various traits measured the present study identified 76T1#23, Teshale, Meko, Gambella-1107 and Melkam as tolerant which showed higher performance under in vitro condition. It is recommended that further work on identification of desirable traits of the selected set of genotypes through marker assisted breeding should follow, so that utilization of the measured traits for selection of drought tolerance could be further integrated with the inheritance/genetics and molecular background of the genotypes selected. In addition to these, Meko, Raya, Macia, Abshir, Girana-1, Teshale, Gambella-1107, Seredo, Misikir, Chelenko were selected for their suitability for callus culture and plant regeneration. In the current study, Genotypes like Chelenko, Hormat and Raya were the most sensitive to drought, therefore they 52 are recommended for crossing and genetic analysis of drought tolerance using diallel mating design or generation mean analysis and also for the QTL (quantitative trait loci) mapping and marker assisted selection. Since the study was carried out under controlled culture media condition, extrapolating the results would require careful consideration of environmental conditions in the field. Therefore, testing the same set of genotypes under real condition to find the relative tolerance should follow. The number of sorghum genotypes utilized in this study was limited only to 16. Similar approach is recommended for other accessions. Moreover, similar study can be used as complementary to field study for varieties being developed through diffferent research programs or for those which are online to be released for commercial production. The concentrations of PEG used in this study were kept as low as below 2% to obtain enough population of regenerated plants for morphological study. Further study using elevated level of PEG concentration is recommended. In the current study, only PEG was used as in vitro drought inducer. 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APPENDICES 70 Appendix A: Main Effects of Genotypes across PEG levels Appendix Table 1: Mean callus induction efficiency, callus fresh weight, embryogenic callus percent and plant regeneration percent of the tested genotypes Variety CIE (%) CFW (mg) ECP (%) PRP (%) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV (%) LSD(p<0.01) 48.22 43.56 75.56 38.67 59.56 57.33 41.78 78.89 41.33 32.44 49.33 50.67 46.22 31.56 44.67 58.44 13.39 6.36 345.14 334.18 330.56 324.06 338.15 341.34 315.01 325.57 341.66 332.16 326.02 343.51 338.08 323.49 344.53 344.04 4.80 15.26 46.24 12.76 40.04 48.57 39.90 53.20 29.97 24.66 49.92 52.02 52.98 35.16 41.99 43.11 29.80 61.19 6.74 2.65 21.16 24.00 23.51 20.97 17.96 19.23 17.44 21.33 23.00 21.04 20.92 22.19 20.20 20.91 23.20 22.67 20.58 3.17 CIE=Callus Induction efficiency CFW=Callus fresh weight ECP=Embryogenic callus percent PRP=Plant regeneration percent 71 Appendix Table 2: Mean coleoptile length, root length and root number of the tested genotypes Variety CL(cm) RL (cm) RN( cm) Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76t1#23 ESH-2 Girana-1 Teshale CV (%) LSD(p<0.01) 14.05 12.43 12.41 11.67 11.27 11.35 11.39 11.66 13.85 15.74 11.71 16.89 12.25 11.63 14.03 14.69 10.85 1.93 6.43 4.71 3.68 4.65 6.97 7.02 4.03 6.15 4.65 6.66 4.97 6.82 4.65 4.71 3.95 6.77 6.86 0.35 28.07 27.13 19.33 21.27 23.00 24.07 21.27 21.80 17.60 27.93 21.80 32.27 16.20 20.87 21.93 24.53 6.86 2.47 CL=Coleoptile length RL=Root length RN=Root number 72 Appendix Table 3: Mean shoot and root dry weight and root shoot dry weight ratio of the tested genotypes Variety SDW(mg) RDW(mg) RSDW Abshir Chelenko Raya Hormat Gubiye Gambella-1107 Birmash Meko Macia Seredo Misikir Melkam 76T1#23 ESH-2 Girana-1 Teshale CV (%) LSD(p<0.01) 1.57 1.70 1.73 1.54 1.58 1.59 1.57 1.60 1.63 2.07 1.57 2.18 1.58 1.56 1.59 1.91 3.39 0.05 0.46 0.43 0.43 0.43 0.43 0.42 0.42 0.44 0.45 0.55 0.39 0.59 0.45 0.42 0.43 0.54 3.27 0.014 0.26 0.25 0.25 0.28 0.28 0.27 0.27 0.27 0.28 0.26 0.25 0.27 0.29 0.27 0.27 0.28 3.86 0.0098 SDW=Shoot dry weight RDW=Root dry weight 73 RSDW=Root shoot dry weight ratio Appendix B: Main Effect of PEG Levels across Genotypes Appendix Table 4: Mean callus induction efficiency, callus fresh weight, embryogenic callus percent and plant regeneration across the PEG stress levels PEG (%) CIE (%) CFW(mg) ECP (%) PRP (%) 0.0 0.5 1.0 1.5 2.0 CV (%) LSD(p<0.01) 58.06 a 53.33 b 49.38 c 46.04 d 42.64 e 13.39 3.55 378.20 a 371.36 a 345.00 b 297.91 c 274.46 d 4.80 8.53 41.05a 40.36b 39.96b 39.39b 37.86c 6.74 1.12 31.84a 25.26b 20.17c 16.03d 12.93e 20.58 2.31 CIE=Callus induction efficiency ECP=Embryogenic callus percent CFW=Callus fresh weight PRP=Plant regeneration percent Appendix Table 5: Mean coleoptile length, root length and root number across the PEG treatment levels PEG Level (%) CL(cm) RL(cm) RN 0 0.5 1.0 1.5 2 CV (%) LSD(p<0.01) 15.49 a 14.87 b 12.98 c 11.41 c 11.41 d 10.85 1.08 5.91 a 5.73 b 5.29 c 5.11 d 4.82 e 6.86 0.20 19.94 21.23 23.00 24.56 26.69 11.25 1.38 CL=Coleoptile length RL=Root length RN=Root number 74 e d c b a Appendix Table 6: Shoot and root dry weight and root shoot dry weight ratio across the PEG stress levels PEG Level (%) SDW (mg) RDW (mg) RSDW 0.0 0.5 1.0 1.5 2.0 CV (%) LSD(p<0.01) 1.79 a 1.74 b 1.69 c 1.66 d 1.62 e 3.39 0.03 0.49 a 0.48 b 0.45 c 0.44 d 0.42 e 3.27 0.0079 0.27 a 0.27 a 0.27 a 0.26 b 0.26 b 3.86 0.0055 SDW=Shoot dry weight RDW=Root dry weight RSDW=Root shoot dry weight ratio Appendix C: General ANOVA Table of the Studied Traits Appendix Table 7: Analysis of Variance Table for CIE Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 3660.80 631.52 392.74 642.67 5327.73 MS 244.053 157.881 6.546 4.017 F 60.76 39.31 1.63 MS 1291.6 96411.8 539.1 257.0 F 5.02 375.08 2.10 Appendix Table 8: Analysis of Variance Table for CFW Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 19373 385647 32343 41127 478491 75 Appendix Table 9: Analysis of Variance Table for ECP Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 35055.5 431.3 535.5 1244.0 37266.2 MS 2337.03 107.82 8.93 7.78 F 300.58 13.87 1.15 MS 57.34 2731.92 17.21 19.03 F 3.01 143.54 0.90 MS 44.928 258.640 3.446 4.127 F 10.89 62.67 0.83 MS 23.7329 9.6038 0.3159 0.1356 F 175.00 70.82 2.33 Appendix Table 10: Analysis of Variance Table for PRP Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 860.1 10927.7 1032.8 3045.2 15865.8 Appendix Table 11: Analysis of Variance Table for CL Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 673.92 1034.56 206.73 660.35 2575.57 Appendix Table 12: Analysis of Variance Table for RL Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 355.993 38.415 18.954 21.699 435.061 76 Appendix Table 13: Analysis of Variance Table for SDW Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 8.6231 0.8840 0.4284 0.5332 10.4687 MS 0.57488 0.22100 0.00714 0.00333 F 172.51 66.32 2.14 MS 0.04314 0.03822 0.00040 0.00022 F 194.30 172.11 1.81 MS 0.00194 0.00216 0.00015 0.00011 F 18.20 20.19 1.36 Appendix Table 14: Analysis of Variance Table for RDW Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 0.64716 0.15287 0.02405 0.03553 0.85961 Appendix Table 15: Analysis of Variance Table for SRDW Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 0.02917 0.00863 0.00870 0.01709 0.06359 77 Appendix Table 16: Analysis of Variance Table for RN Source Variety PEG Variety*PEG Error Total DF 15 4 60 160 239 SS 3883.67 1368.92 343.75 1076.00 6672.33 MS 258.911 342.229 5.729 6.725 F 38.50 50.89 0.85 Appendix D: Culture Media Composition and Preparation Appendix Table 17: Stock solution of macro nutrients SN Chemical Concentration (mg/L) stock (20X) 1 Ammonium nitrate (NH4NO3) 1650.0 2 Potassium nitrate (KNO3) 1900.0 3 Magnesium sulphate (MgSO4.7H2O) 370.0 4 Potassium dibasic phosphate (KH2PO4) 170.0 5 Calcium Chloride (CaCl2)* 440.0 Appendix Table 18: Stock solution of micro nutrients SN Chemical Concentration (g/L) stock (200X) 1 Boric acid (H2Bo3) 6.2 2 Manganese Sulphate (MnSO4.4H2O) 22.3 3 Zinc Sulphate (ZnSO4.7H2O) 8.6 4 Sodium moligdate (Na2MoO4) 0.25 5 Copper Sulphate (CuSO4.5H2O) 0.025 6 Cobalt Chloride (CoCl2.6H2O) 0.025 7 Potassium Iodide (KI)* 0.83 78 Appendix Table 19: Fe-EDTA (Ethylenediaminetetra acetic acid) solution Preparation SN Procedures (200X) 1 Add 1L double distilled water in a beaker 2 Heat until boiling point 3 Separate in to three parts 4 Dissolve separately 3.73 g of Na2EDTA and 2.78 g of FeSO4.7H2O 5 Add FeSO4.7H2O solution over Na2EDTA solution, not vice versa 6 Fill up to 1L in accurate vessel 7 Store in a glass dark vessel inside refrigerator Appendix Table 20: Vitamines, Amino acids, Carbon and energy sources, growth regulators, and solidifying agent SN Chemical Concentration (mg/L) (200X) 1 Casain hydrolysate 500 2 Proline 600 3 Thiamine 0.1 4 Myoinositol 100 3 Polyvinyl pyruvate 10 4 Ascorbic acid (Vitamine c) 10 5 Sucrose 30g 6 Agar 1.2g 7 2,4-Dichlorophenoxyacetic acid (2,4-D) 4 8 Kinetin 0.2 9 Indole-3-acetic acid (IAA) 1 10 6-Benzylaminopurine (6-BA) 3 79 Appendix Table 21: Preparation of MS medium (1000 ml) SN Stock Solution Amount/1000mL 1 MS Macro nutrient solution (20X) 50 ml 2 MS Micro nutrient solution (200X) 5 ml 3 MS Vitamin (200X) 5 ml 4 Iron (200X) 5 ml 5 MS Amino Acids (200X) 5ml 6 Casain hydrolysate 500mg 7 Myoinositol 100 mg 8 → Add BAP, 2, 4, D, Kinetin, and IAA as needed at this stage → Make final volume to 1000 ml by double distilled water → Set pH at 5.8 → Add agar 1.2 gm/L , melt the agar in microwave oven → Sterilize the media for 15 minutes → After autoclaving, gently swirl the medium to mix the agar. When the agar is completely dissolved and mixed, the medium should be dispensed. 80 Appendix Table 22: Agroecological adaptation of the selected sorghum varieties S. No Variety Year of Release Breeder/Maintainer 1 Abshir 2000 MARC/EIAR 2 Chelenko 2005 MARC/EIAR 3 4 5 6 7 Hormat Raya Misikir Girana-1 Gubiye 2007 2005 2007 2007 2000 SRARC/ARARI 8 Gambella1107 1976 MARC/EIAR 9 10 11 Birmash Meko Macia 1989 1997 2007 MARC/EIAR 12 Seredo 1986 MARC/EIAR 13 Melkam 2009 MARC/EIAR 14 76T1#23 1979 MARC/EIAR MARC/EIAR ESH-2 2009 MARC/EIAR 16 Teshale 2002 MARC/EIAR MARC/EIAR 15 Agroecology 81 Altitude: <1600m Rainfall: 600 mm north Shewa, Kobbo and Meiso Altitude:<1850 Rainfall: 900-1200mm Altitude: <1600m Rainfall: 500-800 mm early maturing Wollo and Sirinka Altitude: <1600m early maturing and drought resistant Rainfall: 600 mm north Shewa, Kobbo and Meiso Altitude: (<1600m) Rainfall: 600 mm Gambella,Yabello, Jijga Kobo, Shewa robit Altitude:<1850 Rainfall: 900-1200mm Altitude: <1600m Rainfall: 500-800 mm Has stay green trait Altitude: <1600m Rainfall: 500-800 mm Drought tolerant Altitude :<1600 m Rainfall: 500-800 mm Melkassa, Mieso, Kobo Altitude:<1600m Rainfall: 600 mm North Wello, Cheffa , north Shewa and Meiso very early maturing Altitude :<1600 m Rainfall: 500-800 mm Melkassa, Mieso, Kobo Altitude: <1600m Rainfall: 500-800 mm north Wollo and north Shewa 82
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