Methods in Enzymology Volume 105 Oxygen Radicals in Biological Systems EDITED BY Lester Packer MEMBRANE BIOENERGETICS GROUP UNIVERSITY OF CALIFORNIA BERKELEY, CALIFORNIA Advisory Board Bruce Ames Anthony Diplock Lars Ernster Rolf J. Mehlhorn William A. Pryor Trevor F. Slater Irwin Fridovich FACHBE5?EICH 1984 B I O L O G i E (10) der Technfecher. icr'ischub Darmstadi - B i o i: ; . ;.: D - 6 1 0 0 O a r m s i a d t / B. R. D Inv.-Nr. ACADEMIC PRESS, INC. (Harcourt Brace Jovanovich, Publishers) Orlando San Diego San Francisco New York London Toronto Montreal Sydney Tokyo Sao Paulo Table of Contents CONTRIBUTORS TO VOLUME 105 xi PREFACE xvii VOLUMES IN SERIES xix Section I. Ghemistry and Biochemistry of Oxygen and Intermediate States of Its Reduction 1. Chemistry of Dioxygen MONIKA J. GREEN AND H. ALLEN O. HILL 2. Biochemistry of Oxygen Radical Species M. BRUNORI AND G. ROTILIO 3. Characterization of Singlet Oxygen 3 22 CHRISTOPHER S. FOOTE, F. C. SHOOK, AND R. B. ABAKERLI 4. Role of Iron in Oxygen Radical Reactions 36 BARRY HALLIWELL AND JOHN M. C. GUTTERIDGE 47 Section II. Isolation and Assays of Enzymes or Substances Resulting in Formation or Removal of Oxygen Radicals A. One-Electron Transfer Enzyme Reactions Resulting in O2~ Production 5. Overview: Biological Sources of O2~ IRWIN FRIDOVICH 6. Overview: Superoxygenase RYOTARO-YOSHIDA AND OSAMU HAYAISHI 59 61 7. Methods for the Study of Superoxide Chemistry in JOAN S. VALENTINE, Nonaqueous Solutions ANDREW R. MIKSZTAL, AND DONALD T. SAWYER Generation of Superoxide Radicals in Aqueous BENON H. J. BIELSKI and Ethanolic Solutions by Vacuum-UV Photolysis 71 81 VI TABLE OF CONTENTS - B. Isolation, Purification, Characterization, and Assay of Antioxygenic Enzymes 9. Isolation and Characterization of Superoxide Dis- J. V. BANNISTER AND mutase W. H. BANNISTER 10. Superoxide Dismutase Assays L. FLOHE AND F. OTTING 11. Subcellular Distribution of Superoxide Dismu- BRUCE L. GELLER AND tases in'Rat Liver DENNIS R. WINGE 12. Assays of Glutathione Peroxidase 13. Catalase in Vitro 88 93 105 LEOPOLD FLOH£ AND WOLFGANG A. GUNZLER 114 HUGO AEBI 121 14. Assays of Lipoxygenase, 1,4-Pentadiene Fatty SIMO LAAKSO, Acids, and O2 Concentrations: Chemilumines- ESA-MATTI LILIUS, cence Methods AND PEKKA TURUNEN 126 C. Antioxidants/Prooxidants 15. High-Performance Liquid Chromatography Meth- JUDITH L. BUTTRISS AND ods for Vitamin E in Tissues 16. Vitamin E Analysis Methods for Animal Tissues ANTHONY T. DIPLOCK 131 INDRAJIT D. DESAI 138 17. Simultaneous Determination of Reduced and Oxi- MASAHIRO TAKADA, dized Ubiquinones SATORU IKENOYA, TERUAKI YUZURIHA, AND KOUICHI KATAYAMA 18. Assay of Carotenoids SUDHAKAR WELANKIWAR 19. Uric Acid: Functions)and Determination 147 NORMAN I. KRINSKY AND 155 PAUL HOCHSTEIN, LINDA HATCH, AND ALEX SEVANIAN 162 D. Detection and Characterization of Oxygen Radicals 20. Pulse Radiolysis Methodology KLAUS-DIETER ASMUS 21. Electron and Hydrogen Atom Transfer Reactions: L. G. FORNI AND Determination of Free Radical Redox Potentials R. L. WILLSON 167 179 by Pulse Radiolysis 22. Spin Trapping EDWARD G. JANZEN 188 23. Spin Trapping of Superoxide and Hydroxyl Rad- GERALD M. ROSEN AND icals ELMER J. RAUCKMAN 198 TABLE OF CONTENTS 24. Reaction of • OH . Vll GIDON CZAPSKI 209 25. Electron Spin Resonance Spin Destruction Meth- ROLF J. MEHLHORN AND ods for Radical Detection LESTER PACKER 215 26. Low-Level Chemiluminescence as an Indicator of ENRIQUE CADENAS AND - Singlet Molecular Oxygen in Biological Systems HELMUT SIES 221 27. High-Pressure Liquid Chromatography-Electro- ROBERT A. FLOYD, chemical Detection of Oxygen Free Radicals C. ANN LEWIS, AND PETER K. WONG 231 28. Survey of the Methodology for Evaluating Nega- RONALD PETHIG tive Air Ions: Relevance to Biological Studies 238 E. Genetic Methods for Detection/Assay of Oxygen Radical Species 29. Detection of Oxidative Mutagens with a New Sal- DAVID E. LEVIN, monella Tester Strain (TA102) MONICA HOLLSTEIN, MICHAEL F. CHRISTMAN, AND BRUCE N. AMES 249 30. Determination of the Mutagenicity of Oxygen HOSNI M. HASSAN AND Free Radicals Using Microbial Systems CARMELLA S. MOODY 254 31. Assay of Rate of Aging of Conidia of Neuro- KENNETH D. MUNKRES AND spora crassa CHERYL A. FURTEK 263 Section III. Assay of Modes of Biological Damage Imposed by O2 and Reduced Species ) A. Lipid Peroxidation ' 32. Chemistry of Lipid Peroxidation N E D A. PORTER 273 33. Overview of Methods Used for Detecting Lipid T. F. SLATER Peroxidation 283 34. Chemical Methods for the Detection of Lipid Hy- WILLIAM A. PRYOR AND droperoxides " LAWRENCE CASTLE "" 293 35. Comparative Studies on Different Methods of Ma- R. P. BIRD AND lonaldehyde Determination H. H. DRAPER 299 36. Concentrating Ethane from Breath to Monitor GLEN D. LAWRENCE AND Lipid Peroxidation in Vivo GERALD COHEN 305 37. Assay of Ethane and Pentane from Isolated Or- ARMIN MULLER AND gans and Cells HELMUT SIES 311 Vlll TABLE OF CONTENTS 38. Detection of Malonaldehyde by High-Perfor- HERMANN ESTERBAUER, mance Liquid Chromatography JOHANNA LANG, SYLVIA ZADRAVEC, AND TREVOR F. SLATER 39. Assay for Blood Plasma or Serum KUNIO YAGI 319 328 40. Spectrophotometric Detection of Lipid Conju- RICHARD O. RECKNAGEL AND " gated Dienes , . ERIC A. GLENDE, JR. 331 41. Fluorescence Damage Products of Lipid Peroxi- CORA J. DILLARD AND dation AL L. TAPPEL 337 42. Calibration of Microspectrophotometers as It Ap- WILLIAM S. STARK, plies to the Detection of Lipofuscin and the GREGORY V. MILLER, Blue- and Yellow-Emitting Fluorophores in Situ AND KENDALL A. ITOKU 43. Detection of the Metabolism of Polycyclic Aro- THOMAS A. Dix AND matic Hydrocarbon Derivatives to Ultimate LAWRENCE J. MARNETT Carcinogens during Lipid Peroxidation 341 347 44. Detection of Picomole Levels of Lipid Hydroper- RICHARD CATHCART, oxides Using a Dichlorofluorescein Fluorescent ELIZABETH SCHWIERS, Assay AND BRUCE N. AMES 352 B. Plasma Membrane 45. Measurement of O2~ Production by Human Neu- MICHELE MARKERT, trophils. The Preparation and Assay of NADPH PATRICIA C. ANDREWS, Oxidase-Containing Particles from Human Neu- AND BERNARD M. BABIOR trophils 46. Measurement of O2~ Secreted by Monocytes and RICHARD B. JOHNSTON, JR. 358 365 Macrophages 47. Superoxide Production , PETER J. O'BRIEN 48. Endothelial Culture, Neutrophil or Enzymic Gen- CHARLES F. MOLDOW AND eration of Free Radicals: In Vitro Methods for HARRY S. JACOB 370 378 the Study of Endothelial Injury 49. Systemic Consequences of O2~ Production ROLANDO DEL MAESTRO 386 50. Calcium and Calmodulin in Neutrophil Activation HAROLD P. JONES AND JOE M. MCCORD 389 51. Measurement of Oxidizing Radicals by Polymor- DENNIS P. CLIFFORD AND phonuclear Leukocytes 52. Antimicrobial Activity of Myeloperoxidase JOHN E. REPINE 393 SEYMOUR J. KLEBANOFF, ANN M. WALTERSDORPH, AND HENRY ROSEN 399 TABLE OF CONTENTS 53. Determination of Microbial Damage Caused by HOSNI M. HASSAN Oxygen Free Radicals, and the Protective Role of Superoxide Dismutase IX 404 C. Microsomal Membranes 54. Oxidizing Radical Generation by Prostaglandin H PAUL H. SIEDLIK AND Synthase LAWRENCE J. MARNETT 55. Assay of in Situ Radicals by Electron Spin Reso- RONALD P. MASON nance 412 416 D. Organelles 56. Chloroplasts: Formation of Active Oxygen and Its Kozi ASADA Scavenging 422 57. Determination of the Production of Superoxide ALBERTO BOVERIS Radicals and Hydrogen Peroxide in Mitochondria 429 58. Hydroperoxide Effects on Redox State of Pyridine CHRISTOPH RICHTER Nucleotides and Ca2+ Retention by Mitochondria 435 Section IV. Pathology, Cancer, Aging 59. Glutathione Disulfide (GSSG) Efflux from Cells HELMUT SIES AND and Tissues . 60. Stable Tissue Free Radicals ., ' . THEO P. M. AKERBOOM 445 W. LOHMANN AND H. NEUBACHER 451 61. Assay of Superoxide Dismutase Activity in Tumor LARRY W. OBERLEY AND Tissue DOUGLAS R. SPITZ 457 62. In Vitro Cell Cultures as Tools in the Study of CARMIA BOREK Free Radicals and Free Radical Modifiers in Carcinogenesis 464 63. Radicals in Melanin Biochemistry 479 ROGER C. SEALY 64. Assay of Lipofuscin/Ceroid Pigment in Vivo dur- R. S. SOHAL ing Aging 484 TABLE OF CONTENTS Section V. Enzymes, Viral Activity, and Cell Viability as End Points for Study of Free Radical Damage 65. The Use of Selective Free Radical Probes to Study J. LESLIE REDPATH 491 Active Sites in Enzymes and Viruses Section VI. Drugs: Environmental Induction of Radical Formation and Radical Species 66. Detection and Measurement of Drug-Induced Ox- MARTYN T. SMITH, ygen Radical Formation HJORDIS THOR, AND STEN ORRENIUS 505 67. Alloxan and 6-Hydroxydopamine: Cellular Toxins GERALD COHEN AND RICHARD E. HEIKKILA 510 68. Microsomal Oxidant Radical Production and Eth- ARTHUR I. CEDERBAUM AND anol Oxidation GERALD COHEN 516 69. Exacerbation of Superoxide Radical Formation by HOSNI M. HASSAN Paraquat 523 70. Ethidium Binding Assay for Reactive Oxygen J. WILLIAM LOWN Species Generated from Reductively Activated Adriamycin (Doxorubicin) 532 71. Chemical Carcinogenesis: Benzopyrene System 539 STEPHEN A. LESKO AUTHOR INDEX 551 SUBJECT INDEX 577
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