Key Words Mitochondria Isolation, Discontinuous Sucrose Gradient, Large Volume Pelleting, Saccharomyces cerevisiae, Superspeed Centrifuges, Carbon Fiber Rotors Introduction Mitochondrial isolations are required for studies of a wide range of biological questions. The purity of the mitochondrial preparation is extremely important when studying the functional assembly of mitochondrial DNA. This procedure describes the isolation of mitochondria from large volume cultures of Saccharomyces cerevisiae using the Thermo Scientific Sorvall LYNX 6000 superspeed centrifuge. In addition, this procedure can be readily adapted to other cell types, including bacteria, insects, or mammalian cells. The following protocols were developed based on References 1–4. Procedures STEP 1: Pelleting the Mitochondria 1. Grow overnight a pre-culture of Saccharomyces cerevisiae at 30 °C in Difco YM. 2. Transfer 8 mL of pre-culture into four flasks containing 2 L of Difco YM and grow at 30 °C overnight to OD600. 3. Place the culture into Thermo Scientific Nalgene 1 L superspeed bottles. Perform centrifugation in a Thermo Scientific Fiberlite F9-6x1000 LEX or F10-4x1000 LEX rotor and a Sorvall® LYNX 6000 superspeed centrifuge with the following parameters: 2,000 x g for 15 min at 4 °C. 4. Wash the pellet with ice-cold 18 ΩM H20 and perform centrifugation with the following parameters: 2,000 x g for 15 min at 4 °C. 5. Re-suspend the pelleted cells in 0.1 M Tris-HCl, 1% 2-mercaptoethanol (pH 9.3), and incubate at 32 °C for 10 min. 6. Re-pellet cells using 0.01 M Tris- HCl, 0.5 M KCl (pH 7.0). Figure 1. Thermo Scientific Sorvall LYNX 6000 superspeed centrifuge with Fiberlite F9-6x1000 LEX rotor. 7. Re-suspend the cells in 0.01 M citrate-phosphate buffer (pH 5.8), 1 mM EDTA, 1.35 M sorbitol. 8. Add 1 mg/mL Zymolyase 20T (ICN Biomedicals) and gently shake for 90 min at 32 °C in N2 atmosphere to digest the cell wall for spheroplast release. 9. Pellet the spheroplasts by performing centrifugation in the Thermo Scientific Fiberlite F20-12x50 LEX rotor and the Sorvall LYNX 6000 superspeeed centrifuge with the following parameters: 3,000 x g for 10 min at 4 °C. Technical Note: TNCFGLYNXMITOCH 1012 Isolation of Mitochondria Using the Thermo Scientific Sorvall LYNX 6000 Superspeed Centrifuge Alemania +49 6184 90 6000 Australia +61 39757 4300 Austria +43 1 801 40 0 Bélgica +32 53 73 42 41 China +86 21 6865 4588 or +86 10 8419 3588 España/Portugal +34 93 223 09 18 SPANISH Francia +33 2 2803 2180 Holanda +31 76 579 55 55 India +91 22 6716 2200 Italia +39 02 95059 554 Figure Thermo Japón +81 2. 45 The 453 9220 Nueva ZelandaFiberlite +64 9 980 6700 Scientific Paises Nórdicos/Bálticos/CIS F20-12x50 LEX rotor. +358 9 329 10200 Rusiathe +7 812 703 42 15 5.Collect mitochondrial pellet and re-suspend in Suiza +41 44 454 12 22 pH UK/Irlanda 7.5 buffer. Add 1% SDS and 50 mg/mL proteinase +44 870 609 9203 USA/Canadáfor +1 866 3766 K. Incubate 3 to9843.5 h at 37 °C with gently shaking. Solution can be stored Otros países de Asia +852 for 2885use 4613in further studies. Otros paises +49 6184 90 6000 o +33 2 2803 2180 Conclusion This technical note describes a process for the purification of mitochondria from yeast cells using reliable Thermo Scientific Fiberlite carbon fiber rotors with certified biocontainment and dependable leakproof Thermo Scientific large volume superspeed bottles. This 11. Perform centrifugation with the following © 2012 Thermo Fisher Scientific Inc. Tutti i diritti riservati. Tutti gli altri marchi sono di proprietà di Thermo Fisher Scientific Inc.Nalgene e delle sue filiali. Specifiche, condizioni e tariffe possono subire variazioni. tutti i10 prodotti sonoat disponibili in tutti i paesi. Per1X. maggiori dettagli consultare il rivenditore locale combination, along with the Thermo Scientific Sorvall parameters: 3,000 x gNonfor min 4 °C. Repeat LYNX Svizzera superspeed centrifuge, offers the total solution Australia +61 39757 4300 IndiamL +91 of 22 6716 +41 44 454 12 22 12. Re-suspend the final pellet in 80 0.012200 M for efficient and+44 safe of all your samples. This Austria +43 1 801 40 0 Italia +39 02 95059 554 UK/Irlanda 870processing 609 9203 2 mM BelgioTris-maleate, +32 53 73 42 41 0.6 M mannitol,Olanda +31EDTA, 76 579 55 55 USA/Canada +1 866 984 3766 protocol can be adapted to retrieve mitochondria from Cina +86 21 6865 4588pH or 6.8, at 4 °C and Nuova Zelanda +64 9 980 6700 0.2% BSA, mix thoroughly +86 10 8419 3588 Europa del Nord/CIS Altretypes Nazioni Asiatiche +852 2885 4613 other cell such as bacterial, mammalian, or insect cells. glass rod. Franciawith +33 2a2803 2180 +358 9 329 10200 Nazioni non in elenco +49 6184 90 6000 10. Discard the supernatant and suspend the pellet in 40 mL of 0.01 M Tris-maleate, 0.75 sorbitol, 0.4 M mannitol 2 mM EDTA, 0.1%ITALIAN BSA, pH 6.8. thermoscientific.com Germania +49 6184 90 6000 Russia +7 812 703 42 15 o +33 2 2803 2180 References Giappone +81 45 453 9220 Spagna/Portogallo 13. Perform centrifugation with the following +34 93 223 09 18 1. Guerin, B., Labbe, P., Somlo, M. (1979). Preparation of parameters: 1,000 x g for 10 min at 4 °C. yeast mitochondria (Saccharomyces cerevisiae) with Collect the supernatant into clean tubes. good P/O and respiratory control ratios. Methods GERMAN thermoscientific.com 14. Repeat steps 10-12 and combine supernatants. Enzymol. 55, 149-159. © 2012 Thermo Fisher Scientific Inc. Alle Rechte vorbehalten. Alle anderenWarenzeichen sind Eigentum von Thermo Fisher Scientific Inc. bzw. nationalen 15. Perform centrifugation the und following A.,erhältlich. Barrio, E. (1990). A rapid and simple Niederlassungen. Änderungen von Spezifikationen,with Bedingungen Preisen vorbehalten. Nicht alle Produkte2. sindQuerol, in allen Ländern Ausführliche Informationen erhalten Sie bei17,000 Ihrer Thermo x Fisher Vertretung. parameters: g for 10 min at 4 °C. method for the preparation of yeast mitochondrial Collect the mitochondrial pellet. DNA. Nucleic Acids Res. 18, 1657. Australien +61 39757 4300 Belgien +32 53 73 42 41 Indien +91 22 6716 2200 Italien +39 02 95059 554 Deutschland Nationale kostenlose Hotline Neuseeland +64 9 980 6700 Deutschland International +358 9 329 10200 STEP China +862:21Sucrose 6865 4588 or Gradient Purification Japan +81 45 453 9220 +86Mitochondria 10 8419 3588 Niederlande +31 76 579 55 55 of 0800 1 536 376 Perform the entire purification at 4Nordeuropa/Baltikum/CIS °C. +49 6184 90 6000 1 801 40 0 1.Prepare a discontinuous sucroseÖsterreich gradient+43 (30% w/w, Frankreich +33 2 2803 2180 40% w/w, 50% w/w, 60% w/w), using cold sucrose solutions containing 1 mM EDTA, 0.1% BSA, 10 mM Tris-HCl (pH 7.5)5. Russland +7 812 703 42 15 Spanien/Portugal +34 93 223 09 18 3. Rickwood, D.,44Wilson, Schweiz +41 454 12 22 M. T., Darley-Usmar, V. M. UK/Irland +44 870and 609 9203 (1987). Isolation characteristics of intact USA/Kanada +1 866 984 3766 mitochondria. In V. M. Darley-Usmar, D. Rickwood, Andere asiatische +852 2885 4613A Practical Approach M. T.Wilson (Ed.),Länder Mitochondria: Andere Länder +49 6184 90 6000 (pp. oder 1-16). . Oxford: IRL Press.. +33 2 2803 2180 4. Yaffe, M. P. (1991). Analysis of mitochondrial function and assembly. Methods Enzymol. 194, 627-643. FRENCH 5. Griffith, O.M. (2006). Practical Techniques for thermoscientific.com 2.Re-suspend a mitochondrial pellet in Centrifugal Separations. In O.M. Griffith (Ed.), © 2012 Thermo Fisher Inc. Tous réservés. Les autres marques sont des marques commerciales ou déposées de Thermo Fisher ~ 0.5 mL XScientific number ofdroits centrifuge of 0.5 Mdéposées sucrose. (pp. Scientific Inc et de ses filiales. Les caractéristiques, conditions et tarifs sont susceptibles d’être modifiés. Tous les Fiberlite produits ne sontCentrifuge pas disponibles dans tous 39-45). les pays. Pour tout renseignement, vous adresser à votre distributeur local. on the 3.Gently layer theveuillez mitochondrial suspension sucrose gradient and perform centrifugation in the Allemagne +49 6184 90 6000 France +33 2 2803 2180 Russie +7 812 703 42 15 Fiberlite F20-12x50 LEX rotor with the22following Australie +61 39757 4300 Inde +91 6716 2200 Suisse +41 44 454 12 22 Autriche +43 1 801 40 0 Italie 02 95059 554 UK/Irlande +44 870 609 9203 parameters: 51,000 x g for 2.5 hr at+39 4 °C. Belgique +32 53 73 42 41 Chine +86 21 6865 4588 or Japon +81 45 453 9220 Nouvelle-Zélande +64 9 980 6700 +86Note: a brown band 10 8419The 3588 intact mitochondria form Pays Bas +31 76 579 55 55 at Espagne/Portugal +34 93 223density 09 18 Pays nordiques/baltes/CEI 1.19 g/mL sucrose (approximately the center of +358 9 329 10200 the tube). One or more impurity bands may be seen below the mitochondria band. USA/Canada +1 866 984 3766 Autres pays d’Asie +852 2885 4613 Autres Pays +49 6184 90 6000 ou +33 2 2803 2180 thermoscientific.com/lynxsuperspeed thermoscientific.com Inc.Inc. All rights reserved. All trademarks are theare property of ThermoofFisher Scientific and its subsidiaries. Specifications,Specifications, © 2012 Thermo ThermoFisher FisherScientific Scientific All rights reserved. All trademarks the property Thermo FisherInc. Scientific Inc. and its subsidiaries. terms and and pricing pricing are NotNot all products are available in all countries. Please Please consult your localyour saleslocal representative for details. for details. terms aresubject subjecttotochange. change. all products are available in all countries. consult sales representative Australia +61 39757 4300 Austria +43 1 801 40 0 Belgium +32 53 73 42 41 China +86 21 6865 4588 or +86 10 8419 3588 France +33 2 2803 2180 Germany national toll free 0800 1 536 376 Germany international +49 6184 90 6000 TNCFGLYNXMITOCH 1012 India toll free 1800 22 8374 India +91 22 6716 2200 Italy +39 02 95059 554 Japan +81 45 453 9220 Netherlands +31 76 579 55 55 New Zealand +64 9 980 6700 Nordic/Baltic/CIS countries +358 9 329 10200 Russia +7 812 703 42 15 Spain/Portugal +34 93 223 09 18 Switzerland +41 44 454 12 22 UK/Ireland +44 870 609 9203 USA/Canada +1 866 984 3766 Other Asian countries +852 2885 4613 Countries not listed +49 6184 90 6000 Technical Note: TNCFGLYNXMITOCH 1012 4.Remove the mitochondria band and dilute it with 2 volumes of 1 mM EDTA, 10 mM Tris HCl (pH 7.4). Pellet the mitochondria by performing centrifugation © 2012 Thermo Fisher Scientific Inc. Reservados todos los derechos. Las otras marcas comerciales son propiedad de Thermo Fisher Scientific Inc. y sus with the losfollowing 26,000 x g for 10 min filiales. Características, condiciones y precios están sujetos a posibles cambios. Algunos productos no están disponibles en todos países. Consulteparameters: los detalles con su representante comercial local. at 4 °C. thermoscientific.com
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