Metabolism – Chapters 8, 9, and 10 Metabolism refers to the set of chemical reactions that occur in an organism. These reactions can be anabolic or catabolic in nature. Photosynthesis and cellular respiration are examples. Enzymes facilitate many metabolic reactions. Learning Goals Describe the chemical processes involved in cellular respiration. Describe the chemical processes involved in photosynthesis. Vocabulary Metabolic pathway Anabolic pathway Catabolic pathway Kinetic energy Potential energy Chemical energy First law of thermodynamics Second law of thermodynamics Spontaneous process Entropy Enthalpy Free energy ΔG=ΔH-TΔS Exergonic reaction Endergonic reaction Energy coupling Phosphorylated intermediate Activation energy Substrate Enzyme Active site Induced fit Cofactor Coenzyme Noncompetitive inhibitor Allosteric regulation Feedback inhibition Mitochondria NAD+ NADH FADH FADH2 CO2 H2O O2 Inner mitochondrial membrane ATP asdf ADP Pi Aerobic Oxidize Reduce Glucose Glycolysis Pyruvate oxidation Citric acid cycle Krebs Cycle Oxidative phosphorylation Substrate level phosphorylation Cytosol Electron transport chain Free energy Acetyl CoA ATP synthase Chemiosmosis Proton motive force Chemical energy Potential energy -686 kcal/mol 7.3 kcal/mol 34% autotroph mesophyll stomata stroma thylakoids chlorophyll light reactions Calvin cycle NADP+ NADPH Photophosphorylation Carbon fixation Photons Spectrophotometer Absorption spectrum Carotenoid Analysis Questions 1. What are the three main types of work carried out by cells? 2. How do changes in free energy differ in exergonic and endergonic reactions? 3. What are redox reactions? Provide an example and label the oxidizing and reducing agents in your chemical equation. 4. In terms of free energy (∆G), explain why cellular respiration is an exergonic process. 5. Cellular respiration is said to be 40% energy efficient. Justify this claim using energy measurements (kcal/mol). Also, where does the rest of the energy go? 6. Using the terms potential energy and electronegativity, explain why macromolecules are an excellent source of energy in aerobic environments. 7. Why are macromolecules not spontaneously degraded in cells? 8. How is oxygen’s role in cellular respiration similar to NAD+ and FAD? How is it different? 9. How is oxidative phosphorylation different from substrate-level phosphorylation? 10. Why is glycolysis not really considered part of cellular respiration? 11. Why are some of the intermediates of glycolysis phosphorylized? 12. Identify the roles of acetyl CoA, CO2, H2O, NAD+, FAD, GDP, and oxaloacetate in the Krebs cycle. Photosystem II Photosystem I Linear electron flow Cyclic electron flow G3P RuBP Photorespiration C3 C4 Bundle sheath cells PEP carboxylase CAM 13. Describe how the proton-motive force drives ATP synthesis. 14. Explain how the role of pyruvate changes in aerobic and anaerobic conditions. 15. Are proteins and lipids used as fuel for cellular respiration in the same way as carbohydrates? Explain. 16. How is phosphofructokinase used to regulate ATP synthesis rates in cells? 17. Are the molecules involved in glycolysis and the Krebs cycle used only for catabolism? Explain. 18. What are the light and dark reactions? 19. What is the difference between C3, C4, and CAM? 20. What are absorption spectra and action spectra? 21. What are the differences between photosystem I and II? 22. What is the difference between cyclic and noncyclic electron flow? 23. What is the difference between cyclic and noncyclic photophosphorylation? 24. Describe chemiosmosis in chloroplasts. Is it the same as in mitochondria? 25. Why are carotenoids important to plants? 26. What is the role of RuBP in photosynthesis? G3P? 27. Describe the relationship between photosynthesis and cellular respiration.
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