Louisiana State University LSU Digital Commons LSU Historical Dissertations and Theses Graduate School 1990 Ecology of Erwinia Chrysanthemi, Causal Agent of Bacterial Stem and Root Rot on Sweet Potato and Etiology of Souring. Valmir Duarte Louisiana State University and Agricultural & Mechanical College Follow this and additional works at: http://digitalcommons.lsu.edu/gradschool_disstheses Recommended Citation Duarte, Valmir, "Ecology of Erwinia Chrysanthemi, Causal Agent of Bacterial Stem and Root Rot on Sweet Potato and Etiology of Souring." (1990). LSU Historical Dissertations and Theses. 5043. http://digitalcommons.lsu.edu/gradschool_disstheses/5043 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Historical Dissertations and Theses by an authorized administrator of LSU Digital Commons. For more information, please contact [email protected]. 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O rd e r N u m b e r 9123186 Ecology o f Erwinia chrysanthemiy causal agent o f bacterial stem and root rot on sw eetp otato and etiology o f souring Duarte, Valmir, Ph.D. The Louisiana State University and Agricultural and Mechanical Col., 1990 UMI SOON.ZeebRd. Ann Arbor, M I 48106 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. NOTE TO USERS THE ORIGINAL DOCUMENT RECEIVED BY U.M.I. CONTAINED PAGES WITH PHOTOGRAPHS WHICH MAY NOT REPRODUCE PROPERLY. THIS REPRODUCTION IS THE BEST AVAILABLE COPY. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. Ecology of Erwinia chrysanthemi. Causal Agent of Bacterial Stem and Root Rot on Sweetpotato and Etiology of Souring A Dissertation Submitted to the Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College in partial fulfillm ent of the requirements for the degree of Doctor of Philosophy In The Department of Plant Pathology and Crop Physiology by Valmir B.S., Federal University of Alegre, RS, M.S., Federal University of Alegre, RS, Duarte Rio Grande do Sul, Porto Brazil, 1977 Rio Grande do Sul, Porto Brazil, 1981 December 1990 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. ACKNOWLEDGEMENTS I express my Christopher A. sincere appreciation to my Clark. Gratitude also is advisor, expressed Dr. to my committee members; Dr s. A. Biel, L. L. Black, K. E. Damann, J. W. Hoy, R. W. Schneider, and W. J. Hudnall. I would also like to thank Jeannie A. Wilder-Ayers, Dr. Clark's former research associate, for her assistance. I am also grateful to Dr. J. B. Baker, the faculty, staff, and students of the Department of Plant Pathology and Crop Physiology for their support and encouragement. Appreciation is also extended to my colleagues Faculdade de Agronomia, UFRGS, in the Porto Alegre, RS, Brazil. Of these, I extend a special thanks to the members of "the plant pathology group". The financial support of the Council of National Scientific and Technological Development (CNPq), Brazil, was vital to accomplish my Ph.D. program. I thank my parents, Ramâo and Leocadia Duarte, for their constant moral support. I am also deeply grateful to my wife, Nara, and my two daughters, Amanda and Cristiane, for their love, encouragement, and support during my years as a graduate student. 11 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. TABLE OF CONTENTS Page ACKNOWLEDGEMENTS ....................................... Ü LIST OF TABLES ......................................... vi LIST OF FIGURES ........................................ vii ABSTRACT ............................................... X INTRODUCTION ................................... 1 CHAPTER I REVIEW OF LITERATURE ................................. 4 A. Persistence and dissemination of Erwinia sp. 5 B. Quantitative studies of soft-rot erwinia ... populations ....................................... 11 C. Characterization of Erwinia chrysanthemi ........ 17 D. Phytopathogenic pectolytic clostridia ........... 21 Literature cited ................... 26 CHAPTER II PRESENCE OF Erwinia chrysanthemi. CAUSAL AGENT OF STEM AND ROOT ROT, ON SWEETPOTATO THROUGH THE GROWING SEASON Abstract .............................................. 36 Introduction .......................................... 37 Materials and Methods ................................ 38 Results ............................................... 44 Discussion ............................................ 48 Tables and Figures .......................... 51 Literature Cited ...................................... 65 111 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. CHAPTER III CHARACTERIZATION OF SWEETPOTATO STRAINS OF Erwinia chrysanthemi. CAUSAL AGENT OF BACTERIAL STEM AND ROOT R O T ............................................... 67 Abstract ............................................... 68 I n t r o d u c t i o n ....... 69 Materials and Methods ................................ 71 Results ................................................ 75 Discussion ............................................ 78 Tables and Figures .................................... 80 Literature Cited ...................................... 92 CHAPTER IV EFFECTS OF INTERACTION OF Erwinia chrysanthemi AND Fusarium solani ON SWEETPOTATO STEM R O T ............. 94 Abstract ............................................... 95 Introduction .......................................... 96 Materials and Methods ................................ 97 Results ................................................ 100 Discussion ............................................ 102 Tables and Figures .................................... 104 Literature Cited ...................................... Ill CHAPTER V ASSOCIATION OF PECTOLYTIC CLOSTRIDIA WITH SOURING OF SWEETPOTATO STORAGE ROOTS ....................... 112 Abstract ............................................. 113 Introduction ......................................... 114 iy Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. Materials and Methods ................................ 116 Results ............................................... 121 D i s c u s s i o n ......... 124 Tables and Figures ................................... 128 Literature Cited ..................................... 141 V I T A .................................................... 144 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. LIST OF TABLES Table II. Page PRESENCE OF ERWINIA CHRYSANTHEMI■ CAUSAL AGENT OF STEM AND ROOT ROT ON SWEETPOTATO, THROUGH THE GROWING SEASON 1. Number of contaminated mother roots ............... 51 2. Number of contaminated underground stems .......... 52 3. Plant production in beds ........................... 53 4. Yield of storage roots .............................. 54 III. CHARACTERIZATION OF SWEETPOTATO STRAINS OF ERWINIA CHRYSANTHEMI. CAUSAL AGENT OF BACTERIAL STEM AND ROOT ROT 1. Sources of Erwinia strains ......................... 80 2. Comparison of strains for stem rot indices ....... 81 3. Estimate of median effective dose ............ 82 4. Tests of carbon source utilization ................ 83 IV. EFFECTS OF INTERACTION OF ERWINIA CHRYSANTHEMI AND FUSARIUM SOLANI ON SWEETPOTATO STEM ROT 1. Dry weight of plants .............................. 104 2. Disease incidence and remaining plants .......... 105 3. Effect on sweetpotato yield ...................... 106 4. Effect of soil matric potential .................. 107 VI Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. LIST OF FIGURES Figure Page II. PRESENCE OF ERWINIA CHRYSANTHEMI. CAUSAL AGENT OF STEM AND ROOT ROT ON SWEETPOTATO, THROUGH THE GROWING SEASON 2. 1. Inoculation of mother storage roots by dipping ... 55 2. 2. Inoculation of mother storage roots by micropipette tip ................................... 56 2. 3. Plant production bed layout ....................... 57 2. 4. Diagram of experiments ............................ 58 2. 5. Storage root sampling m e t h o d ................... 59 2. 6 . Isolation plating ................................. 60 2 . 7. Sweetpotato underground s t e m ................... 61 2. 8 . Populations of Erwinia chrysanthemi on mother roots ................................................ 2. 9. Survival in soil at three temperatures 2.10. III. .......... Recovery of Erwinia chrysanthemi from crate wood CHARACTERIZATION OF SWEETPOTATO STRAINS OF . 62 63 64 ERWINIA CHRYSANTHEMI. CAUSAL AGENT OF BACTERIAL STEM AND ROOT ROT 3. 1. Toothpick inoculation .............................. 84 3. 2. Stem rot index ..................................... 85 3. 3. Storage root inoculation ................... 86 3. 4. Comparison of strains for sweetpotato stem rot indices ......................................... 3. 5. Comparison of strains for tomato stem rot indices. vii Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 87 88 3. 6 . Comparison of strains for bell pepper stem rot indices ............................... 3. 7. Comparison of strains for cabbage stem rotindices 89 90 3. 8 . Comparison of strains for storage root lesion dimension .......................................... IV. EFFECTS OF INTERACTION OF ERWINIA 91 CHRYSANTHEMI AND FUSARIUM SOLANI ON SWEETPOTATO STEM ROT 4. 1. Vine cutting inoculation .......................... 108 4. 2. stem rot lesions on s w e e t p o t a t o .................. 109 4. 3. Length of stem rot l e s i o n s ........................ 110 V. ASSOCIATION OF PECTOLYTIC CLOSTRIDIA WITH SOURING OF SWEETPOTATO STORAGE ROOTS 5. 1. Souring symptoms ................................... 128 5. 2. Preparation of cylinders of raw storage root tissue ............................................ 129 5. 3. Anaerobiosis using wet paper towel and plastic wrap ................................................ 130 5. 4. Effect of disinfestation of storage roots on incidence of souring .............................. 5. 5. 131 Colonies of pectolytic clostridia on PIA medium .. 132 5. 6 . Cell morphology of pectolytic b a c t e r i a .......... 133 5. 7. Maceration of raw tissue c y l i n d e r s ..... ......... 134 5. 8 . Maceration activity on different hosts .......... 135 5. 9. Pathogenicity on s w e e t p o t a t o ..................... 136 5.10. Pathogenicity on potato tubers ................... 137 5.11. Pathogenicity on carrot .......................... 138 viii Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 5.12. Pathogenicity on o n i o n ............................ 139 5.13. Combined inoculation with Erwinia chrysanthemi and pectolytic Clostridium ........................ IX Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 140 ABSTRACT During three seasons, mother storage roots of Beauregard sweetpotato were inoculated with Erwinia chrysanthemi in March, and the pathogen was recovered from them the day they were bedded, 7 days later, and at the first and second pullings of slips as well as from underground stems at harvest in September and October of the first and second transplantings, respectively. Little stem rot occurred in the fields during the three seasons. Thirteen strains of E. chrysanthemi. 8 isolated originally from sweetpotato and 5 from other hosts, and one strain of E. carotovora subsp. carotovora were inoculated on sweetpotato and 12 different hosts. Strains from hosts other than sweetpotato caused little or no disease on sweetpotato. Of 95 carbon sources tested, sweetpotato strains used the same 25, were unable to grow on 57, and varied on 13 substrates. Jewel and Beauregard sweetpotato stem cuttings were inoculated with E. chrysanthemi and/or Fusarium solani before planting in greenhouse, the greenhouse and in the field. In the stem rot lesion length was greater when the two pathogens were inoculated together than the sum of stem lesion length produced by both pathogens inoculated separately. The same effect was observed on Beauregard in the field in 1989 and 1990. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. When storage roots were punctured with a flamed needle and incubated plastic bags, tests, 15% and for 5 days submerged in distilled water 85 to 100 % rotted in 2 tests. none of storage roots in In the same rotted when surface disinfested with NaOCl. Two distinguishable pectolytic sporeforming, anaerobic bacteria resembling Clostridium in morphology were found in the lesions, regardless of treatment. Inoculation of storage roots with pure cultures of these bacteria and incubation under anaerobic conditions induced rapid maceration and production of gas, typical of "souring", a disorder previously regarded as solely physiological origin. XI Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. in INTRODUCTION Until recently, sweetpotato, bacterial Ipomoea batatas (L.) stem and Lam., root caused by rot of Erwinia chrysanthemi Burkholder, McFadden, and Dimock was unknown. In 1974, a major outbreak of this disease occurred in production areas of Georgia, and in 1975 it threatened the existence of the sweetpotato industry in that state (7, 79). In Louisiana, the disease has not been found as a stem rot but has been found to a limited extent in storage roots in plant beds and the field. However, new cultivars have shown greater susceptibility to E. chrysanthemi when artificially inoculated (8 , 75). Despite the potential hazard of this disease to the sweetpotato crop, literally nothing has been reported on it. Therefore, I studied several aspects of E. chrysanthemi ecology to develop a better insight into the epidemiology and control of the disease. Following this reasoning, I reviewed, in chapter I, the current knowledge on (a) persistence Erwinia sp., (b) quantitative studies and dissemination of populations of of Erwinia sp., (c) characterization of E. chrysanthemi. and (d) phytopathogenic pectolytic clostridia. To address some of the epidemiological aspects of bacterial stem and root rot, I conducted experiments to study (a) the presence of E. chrysanthemi on sweetpotato through the growing season, (b) the transmission of the bacterium from seed roots to stems and new plants, (c) the effect of pulling Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 2 versus cutting transplants from beds with inoculated roots on transmission and disease occurrence, and (d) the transmission of the pathogen to stem cuttings and/or to sprout stubs and mother roots by contaminated knives. The results of these investigations are reported in chapter II. Information on strains of any pathogen has considerable practical interest. The selection of strain (s) for evaluation of germplasm for resistance is a particular example. Also, information on antibiotic resistant mutants used in ecological studies is essential. In the investigation mentioned above, I employed a rifampicin-resistant strain of E. chrysanthemi to trace this pathogen through the sweetpotato growing season. Therefore, I compared (a) virulence of sweetpotato and other strains of E. chrysanthemi on sweetpotato and (b) on different hosts, (c) utilization of carbon sources by strains, and (d) a rifampicin-resistant strain to the wild type using these tests. The report of the results of these investigations is in chapter III. Several lines of evidence suggest an interaction of E. chrysanthemi and Fusarium solani. the latter causing Fusarium root and stem canker, on stem and root diseases of sweetpotato. Therefore, I conducted experiments to examine the effects of combined inoculation of stems and roots with E. chrysanthemi and F. solani. The results are reported in chapter IV. Sweetpotato growers may encounter serious economic losses Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 3 when excessive rainfall results in water-saturated soils for several days prior to harvest. It leads to the asphyxiation of harvestable storage roots and usually to a condition known as "souring” , a disorder previously thought to be exclusively physiological in origin. I hypothesized the involvement of E. chrysanthemi. a facultative anaerobic bacterium. However, this bacterium was not association of sweetpotato became found in pectolytic evident. affected tissue. clostridia The with results, Instead, the souring of demonstrating pathogenicity of these pectolytic clostridia, are reported in chapter V. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. CHAPTER I LITERATURE REVIEW Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. A. PERSISTENCE AND DISSEMINATION OF ERWINIA SP. INTRODUCTION Accurate identification of the sources of inoculum is a prerequisite control for the strategies dissemination can determination (81). of Investigation indicate ecological important to the success of a pathogen. effective disease of persistence and features are that The ecology of the soft rot erwinias in relation to potatoes has been reviewed (63). Therefore, this review intends to highlight only some of the major aspects of persistence and dissemination of soft rot erwinias. A.I. SOIL Evidence for survival of erwinias in soil is conflicting (63). Despite reports persist in soil primary (5, 71, source of indicating that the bacteria could 72), the significance of soil as a inoculum has been refuted (81). Potato fields in Scotland were extensively infested after harvest in September, early but populations declined to very summer infested soil, of the following year (62). longevity was greater in dry low levels by In artificially (1 0 % moisture) than in wet (2 1 % moisture) soil ai i decreased as temperatures rose, particularly above 25 C. carotovora subsp. carotovora Because survival of the E. and E. carotovora subsp. atroseptica in soil is apparently restricted, their presence in fields could be attibuted to recurrent introductions from Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 6 The predominance of E. carotovora subsp. carotovora or E. carotovora subsp. atroseptica in the soil is dependent on soil temperature (54, 64). When inoculated tubers were planted in cool soils in the field or greenhouse (7.0-18.5 C average minimum and 16-26 C average maximum temperature during the first 30 days after planting) E. carotovora subsp. atroseptica caused significantly more disease than E. carotovora subsp. carotovora. When soil temperatures were high at planting time (21.4-24.0 C average minimum and 29.6-35.0 C average maximum temperature carotovora carotovora for the subsp. subsp. first carotovora 30 days caused atroseptica. At after more planting), disease than intermediate E. E. soil temperatures both were infective (54). A survey of a sweetpotato field that was being harvested showed that between 5 and 10% of the harvested roots were rotted even though above ground plant parts were symptomless. Erwinia chrysanthemi was isolated from soil and soil debris collected from a harvester, but not from field soil. However, it was suggested that E. chrysanthemi could survive in soil in small numbers (79) . Erwinia chrysanthemi was isolated from blackened roots, soft discolored rhizome tissue and rhizosphere soil, but not from field soil in the immediate neighborhood of diseased cardamon plants (Elletaria cardomomum) (83). In contrast, soil was considered to be the primary source of inoculum of E. chrysanthemi. causal agent of bacterial leaf spot of tobacco. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 7 and secondary spread was shown to be caused by rainwater splashing from infected to healthy plants (24). Erwinia carotovora subsp. carotovora and E. carotovora subsp. atroseptica have been isolated from fallow field soils (53), nonagricultural collected from soils, streams, as well as from water samples lochs, and rivers in arable and nonarable areas (35), but no Erwinia spp. were isolated from underground waters (52). Erwinia carotovora subsp. atroseptica and subsp. different carotovora were detected cropping Erwinias were histories found in all on in all three fields, 17 farms fields with in Scotland. although they were not found consistently and were usually in small numbers. suggested that the bacteria could be endemic in This soil in Scotland (62). In another study, E. chrysanthemi survived in mineral soil for 18 days, but was undetected in unsterile peat 1 day after infestation (44). Using a selective, differential medium (PT), soft-rot Erwinia spp. were isolated from rhizosphere soils of many crop plants and from some field soils containing plant residues (5) . Erwinia carotovora was detected in the root zone of potato plants and also in soil samples between plants, but in smaller numbers than in the root zone. Moreover, although few plants showed symptoms of blackleg during the growing season, almost all tubers were infested with E. carotovora at harvest (13). The presence of E. carotovora in rhizosphere soil of any Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 8 O f the weeds (groundsel, pineapple weed, shepherd's purse, and speedwell) or crops (barley, wheat, cabbage, rape, and turnip) examined in Scotland, with the exception of brassicas, was no more frequent than in bare soil (13). Survival was best in association with brassicas, moderate on grasses and cereals, and least on potatoes and weeds (62). The role of the rhizosphere as a niche in which E. carotovora can extend its longevity in soil has been suggested (42, 43). However, survival of the bacteria in both bare and rhizosphere soil was similar and dependent on the temperature and to a lesser extent, on the soil moisture content. Moreover, survival was not favored by any of the plant species examined, including potatoes. However, E. carotovora subsp. carotovora survived well on brassicas (42, 62). A.2. Water Investigation of the presence of E. carotovora in surface water in North America showed that E. carotovora subsp. carotovora represented 98.8% of strains recovered from surface water samples; E. carotovora subsp. atroseptica made up the remainder of the isolates and E. chrysanthemi was not found (35) . Water in the soil after heavy rain leaches E. carotovora from rotting tubers. Evapotranspiration forces redistribute both water and the bacteria in the upper part of the drill as it dries. Tubers absorb water and the lenticels soon open or proliferate. The bacteria in the water film eventually reach Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 9 the complementary cells of the lenticels. As the soil continues to dry, the water phase becomes discontinuous and bacterial movement is restricted (58). A.3. Plant Residues Erwinia chrvsanthemi survived in artificially infested soil and in infected carnation debris in sufficient numbers to induce symptoms in carnation plants after 25 and 70 days, respectively (26). In another study, it was not recovered from infected plant parts that had been buried in a compost pile for 10-12 weeks (37). A.4. Infested planting stock Contamination of progeny tubers by E.carotovora occurs after the mother tubers have rotted and released bacteria into the soil (57). No relation between blackleg incidence and the level of contamination in the harvested tubers was found (57). Erwinia survives in the lenticels and to a lesser extent on the tuber surface during the storage period (57), but its population or the ability to detect it decreases substantially with time (14). A.5. Aerosols When simulated raindrops fall on blackleg-infected potato stems, an aerosol containing bacterial cells is generated. The aerosol moves readily in airstreams. These bacteria remain viable for more than 1 hr in a closed system at 90-95 % r.h. and 10.6 blackleg C (29). Thus, organism could airborne occur transport following the of the potato generation Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. of 10 aerosols by raindrop Also, airborne E. impact on infected carotovora subsp. stem tissue carotovora (30) . and E. carotovora subsp. atroseptica survive for 15 min or more to indicate that airborne spread of viable bacteria cells could take place, especially under cool, humid atmospheric conditions (31). This information helps assess the potential significance of aerosol transmission. Thus, potato crops, raised from potato stocks free from infection with soft rot Erwinia. could be recontaminated. It also suggests it should be possible to estimate the separation distances between crops that would be necessary to minimize recontamination (30). Aerosols containing both erwinias have been found Scotland after rain during the latter half of the year in (59, 74), and it is postulated that erwinias could be washed out of the air by rain to contaminate water puddles and plant leaves (62). Contaminated leaves later rot on the soil surface and the bacteria contamination are released would into the soil depend on the (25). occurrence Hence, of soil aerosols containing erwinias coupled with the requirement for rain for deposition (62). REMARKS The question of whether soft rot erwinias are endemic at low level in soil is still unresolved. However, it has been generally accepted that they do not have a permanent soil phase. Their occurrence in fallow and nonagricultural soils might occur by repeated introduction from a variety Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. of 11 sources, results particularly reported may air be and rain explained (62). at The least conflicting partially by differences in climate and in methodology used to detect low numbers of the bacteria (63). In common with many other plantpathogenic bacteria, the soft-rot erwinias can overwinter in contaminated harvest with plant residues remaining in the soil after (63). The bacteria also may survive in association volunteer plants of the affected crop or in the rhizospheres of other cultivated plants and of certain weeds, particularly in tropical regions where plant growth is often continuous and the vegetation diverse (63). A comprehensive view of the ecology of these bacteria will be obtained only when their relationships with crops other than potatoes in temperate regions and with all crops in other regions also have been examined (63). B. QUANTITATIVE STUDIES OF SOFT-ROT ERWINIA POPULATIONS INTRODUCTION No effort is made in this review to describe in detail any of the various techniques that have been developed to quantitate soft-rot Erwinia or to list all their applications. Rather, the purpose is to give an overview of the main methods and point out some of the benefits of using them. B.l Selective media A weakness in quantitative work is that selective media may kill or inhibit not only unwanted organisms but also a part of the desired population which may be sensitive to toxic Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 12 compounds, e.g. damaged, senescent, or actively dividing cells (65). A medium (CVP) containing NaNOg, sodium polypectate, and crystal violet was compared with other selective media for the isolation of soft-rot bacteria from soil. Pectolytic colonies of Erwinia spp. could be distinguished from Pseudomonas spp. by the type of depressions pectate and medium colony morphology. those formed of in the Recovery of E. carotovora and E. carotovora subsp. atroseptica from amended field soil on CVP ranged from 65 to 100%, depending upon soil type and the number of bacteria added to soil samples. When CVP was used for detection of soft-rot bacteria in soil samples from cabbage, carrot, and potato fields, fluorescent pseudomonads (not soft-rot Erwinia) were the pectolytic gramnegative bacteria most frequently isolated (1 1 ). A substitute of CVP medium (BCVP) polypectate manufactured by Bulmer Ltd Plough improves Lane, Hereford both the atroseptica and production of E. rate HR4 OLE, of growth carotovora pectolytic UK) of (H. was E. subsp. pits (16). containing P. a Bulmer Ltd, described carotovora carotovora Recently, which subsp. and the a new formulation for BCVP, named MBCVP, substituted KNO 3 for NaNOg, incorporated 0.5% peptone, and altered the CaCl 2 -agar concentration. These modifications, combined with the use of cold rather than boiling water and mixing by hand rather than using a blender, produced a smooth, firm medium suitable for streaking, on which large colonies form distinct, deep pits Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 13 after 24 hr (89). A selective medium (PT) containing polygalacturonic acid as the carbon source was developed to detect E. carotovora subsp. carotovora and E. carotovora subsp. atroseptica in the rhizosphere, plant debris, and soil. Erwinia was distinguished by the formation of clear zones (zones of pectolysis) around the colonies after gently flooding plates with a solution of cetrimide. Furthermore, Erwinia could be differentiated from other bacteria colonies. To by the increase formation the of white, efficiency of scallop-edged the assay, an enrichment technique with PT broth also was used (5). A method was described for identifying and quantifying E. carotovora subsp. carotovora. E. carotovora subsp. atroseptica. and E. chrysanthemi directly from plant tissue and from other sources based on the pattern of growth and cavity formation different on CVP temperatures with or (61). without Erwinia erythromycin chrvsanthemi at forms cavities on CVP at 27, 33.5, and 37 C but failed to grow at 27 C on CVP with erythromycin. The method allows the differentiation of the three erwinias in a mixed population and avoids purification, (61). However, time and a consuming procedures of isolation, identification using physiological study using 45 erwinia strains tests from 14 different hosts did not confirm the efficacy of the method (40). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 14 6.2. Enrichment and estimation procedures Low numbers of soft rot bacteria can be detected in soil if samples are incubated anaerobically in a pectate-basal salt solution (53). Enrichment media, antibiotic resistance, and Most Probable Number (MPN) analysis were used to enumerate as few as 1 to 10 cells of genetically engineered E. carotovora subsp. carotovora / 10 g soil (77). The technique was applied in studying the fate of genetically engineered E. carotovora after introduction into soil microcosms. The MPN technique is recommended to monitor the persistence of genetically engineered E. carotovora subsp. carotovora after its release into the environment (77). The concentration of organisms estimated without any direct count. in a liquid can be The concept of MPN is based on an application of the theory of probability. There are two principal assumptions: the organisms are distributed randomly throughout the liquid, and the sample is certain to exhibit growth whenever it contains one or more organisms (9) . The usefulness of MPN was postulated for determining numbers of E. carotovora subsp. carotovora and E. carotovora subsp. atroseptica in soils and plant material (55). Instead of replicate tubes serial dilutions, medium were placed. The used of inoculated broth with aliquots defined on which conclusion was areas of a solid from semiselective drops from the dilutions that when working with were small populations of E. carotovora. as often occurs in soils and on Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 15 plant materials, MPN may be the best choice (55). B.3. Environment A method that involves wrapping tubers in wet tissue paper, placing them in polyethylene bags, and incubating them in a nitrogen atmosphere for 6 to 7 days was developed for detection of potato tubers contaminated with E. carotovora subsp. carotovora and E. carotovora subsp. atroseptica (56). Further investigation showed that there was between a nitrogen atmosphere for no difference incubation and a double layer of polyvinylidene film. Two layers of polyvinylidene film precluded the requirement for special incubation chambers and a source of nitrogen (14). Latent infection or contamination can also be detected when tubers are induced to rot under anaerobic conditions induced by maintaining a film of water over the tuber (63). B.4. Serology Although serological testing has been quite successful for various phytopathogenic bacteria, serological indexing for E. carotovora strains which (12, is hampered by the 78, combines a 84). serological diversity of Fluorescent antibody staining an antiserum (FAS), globulin fraction of with fluorescein-isothiocyanate, was used for identification of isolates of E. carotovora subsp. carotovora and E. carotovora subsp. atroseptica (2, 70). Fluorescing E. carotovora subsp. atroseptica cells were detected on prepared slides in mixed populations containing as few as 500 cells/ml mixed with 10® Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 16 cells/ml of E. carotovora subsp. carotovora. Cells of E. carotovora subsp. atroseptica also were detected in soils to which as few as 10 cells/g had been added and on potato leaves previously sprayed with bacterial suspensions. The FAS procedure also was effective in detecting E. carotovora subsp. atroseptica tubers and in tissues of infected and/or decaying potato in artificially contaminated adult fruit flies (Drosophila melanoqaster) (2). A serologically identifiable strain of E. carotovora subsp. atroseptica was used to monitor this pathogen in the field (34). Potato tubers were inoculated in the field in June and the strain was detected in November in the remains of inoculated tubers. B.5. DNA-DNA Hybridization Various strategies have been used to develop genomic DNA probes specific for particular bacterial pathogens. One approach has been to screen the target bacterium plus closely related bacteria with individual or pooled DNA probes (15). A DNA probe was developed which was specific for E. carotovora and hybridized with all tested strains in the subspecies atroseptica. carotovora. and betavasculorum. regardless serogroup specificity. The probe, isolated of from a genomic library of Erwinia. was selected for its ability to hybridize to genomic DNA of Erwinia. but not to genomic DNA from the taxonomically related Escherichia coli. A single colony of E. carotovora could be detected against a background of about 1,000 colonies of soil bacteria on nitrocellulose filters. As Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 17 few as 200 colony-forming units (cfu) of E. carotovora subsp. atroseptica could be detected in a suspension containing 2 X 10^ cfu / ml of soil bacteria (84). REMARKS CVP medium, tool for or its substitutes, has been a very useful quantitating and detecting soft rot erwinias. Enrichment procedures can help recovering these pathogens when the population is very low. Combining enrichment media, antibiotic resistance, and MPN analysis should be considered in ecological studies of soft rot erwinias. Likewise, serology and molecular markers are good tools, facilitating the detection of target bacteria. However, it is still difficult, using current available methods, to distinguish between cases of 'die out' (complete elimination) and 'die back' (decline of populations below detectable levels). C. CHARACTERIZATION OF Erwinia chrvsanthemi INTRODUCTION Erwinia chrvsanthemi Burkholder, McFadden & Dimock was designated as a new species based on strains that had been isolated from Chrvsanthemum morifolium host range, used to physiological properties, characterize E. (4). Information on and serology has been chrvsanthemi. This review will highlight some of these aspects. c.l. Host Range Strains of E. chrvsanthemi have been tested for virulence or pathogenicity to plants or plant parts of at least 118 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 18 plant species or cultivars Artificial plant (3, 4, inoculation 6 , 18, tests 27, with 36, 39, strains 50). of E. chrysanthemi have shown great variability. Although this may be attributed primarily to the inoculation methods and strains used, it also is taken as an indication that many strains of E. chrvsanthemi cause disease in plants other than those from which they have been isolated (18). C.2. Physiological Properties Erwinia chrvsanthemi. E. carotovora subsp. carotovora and E. carotovora subsp. atroseptica are physically alike in being peritrichously flagellated rods and biochemically alike being pathogenic anaerobes, to plants, gram-negative, in facultative reducing nitrate to nitrite, and fermenting many carbohydrates to acids (28, 38). Erwinia pectate acetoin, chrvsanthemi degradation; and sensitivity acid to has been production from ethanol, erythromycin; characterized of based phosphatase, growth producing at gas 36 from indole, to 37 lactose, or palatinose (21). trehalose, C, glucose, utilization of malonate; inability to grow in 5% NaCl; or produce acid from a-methyl-d-glucoside, on to maltose, In a comparative study of the phenotypic properties of 421 strains of Erwinia species, all strains of E. chrvsanthemi were separated from other Erwinia spp. primarily by three physiological characters; production of gas from D-glucose, phosphatase production, and inability to produce acid from D-trehalose (17). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 19 Strains of E. chrvsanthemi isolated from Musa paradisiaca L. could be distinguished from 322 strains isolated from 22 other plant hosts by the following properties: production of acid from D-arabinose and raffinose; utilization of sodium tartrate; inulin, lack of production mannitol, or of sorbitol; lecithinase and or inability acid to from liquefy gelatin (2 1 ). The rice isolates were very similar to those isolated from corn. However, the rice strains produced top soft rot or stalk rot on corn seedlings while the corn strains were less virulent on rice. This suggests that the rice isolates are distinct strains (27). The ability to produce the enzyme tryptophanase has been used for differentiation among the Erwinia spp. associated with potato soft rot disease (41). The presence of this enzyme results in accumulation of indole as a catabolite of tryptophan and can be detected based on its reaction with glutaconic aldehyde which produces a red-violet polymethine dye (10). Although some indole-positive strains can be found, E. carotovora atroseptica. E. subsp. carotovora. herbicola. and E. E. carotovora rhapontici are subsp. indole- negative while E. chrvsanthemi is indole-positive (10). C.3. Pathovar The phenotypic characteristics of 352 strains of E. chrvsanthemi from 28 hosts and the separation of the strains into six subdivisions has been reported (17, 21, 89). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. The 20 strains were assigned to a plant reaction group (I, II, III, IV, V, and VI) based on the reactions of five or seven plant species (21). It was proposed that the subdivisions could be equated with the pathovar proposal. Thus, pathovars dieffenbachiae. parthenii. chrvsanthemi. zeae. dianthicola. and paradisiaca respectively would correspond to subdivisions I to VI, (17, 18, 21, 89). However, the proposed six pathovars proved to be inadequate to designate the host range groups because many strains of E. chrvsanthemi are not limited to causing disease only in plants from which they have been isolated (18). This would avoid designation of pathovars to strains which have few or, in some cases, no distinguishing phenotypic characteristics (18). The plant reaction group to which a strain belongs can not be predicted by the phenotypic properties of the strains. No relationship could be found among the plant reactions, the phenotypic properties, and the original host of strains (IB). Thus, the use of the pathovar designation for strains of E. chrvsanthemi should be avoided. Perhaps a simple solution to this dilemma is to indicate the original host of the strain (e.g., E. chrvsanthemi [carnation strain], [corn strain], E. chrvsanthemi etc.) until well defined biovars can be established that are correlated with pathogenic properties (18). C.4. Serology Serological methods have been used for the identification Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 21 of E. chrvsanthemi. and strains have been separated into serovars (19, 22, 8 8 ). Antigenic heterogeneity among strains of E. chrvsanthemi isolated from a specific host and among strains from However, serovar different there and has hosts been original no has been definite host, demonstrated relationship geographical (2 0 ) . between location, and phenotypic characteristic of the strains (19, 20, 22, 8 8 ). REMARKS Despite the attempts to assign pathovars or subdivisions to isolates of E. chrvsanthemi. no support was found when either host reaction or phenotypic characters were compared among them. On the other hand, a great antigenic heterogeneity among isolates of E. chrvsanthemi has been reported. D. PHYTOPATHOGENIC PECTOLYTIC CLOSTRIDIA INTRODUCTION Pectolytic clostridia have been implicated in post harvest spoilage of potatoes, in cavity spot of carrots, and in wetwood conditions in trees. Lund (1982) reviewed the possible significance of these bacteria in plant pathology. This review does not attempt to further that of Lund; primarily because there has been little subseguent literature on Clostridia. background The main information purpose is to bring together for understanding the occurrence of pectolytic clostridia associated with souring of sweetpotato. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 22 D.l. Occurrence Contamination by pectolytic clostridia is likely to be widespread since these bacteria are ubiquitous in most soils (73). Prévôt et al. (1967) listed 17 species of pectolytic obligate anaerobic bacteria commonly found in soils including six nonpigmented and eight pigmented (usually pink) Clostridium spp. and three Plectridium spp. Also, pectolytic pigmented and non-pigmented bacteria belonging to the genus Clostridium have been found in sugar beet silages causing texture loss of the ensiled mass when they are present in excess (82). Cavity spot was described in 1961 on carrot and parnisp roots (33) . The disorder affects canning quality. It had been reported to be caused by calcium deficiency, either actual or induced by excessive potassium levels in soil (51). However, this hypothesis was not confirmed (6 6 ). In addition, pectolytic Clostridium spp. were found on carrot roots during investigations into cavity spot and were shown to be capable of inducing extensive soft rotting of roots under anaerobic conditions (67, 69). Despite claims for association of pectolytic Clostridium with cavity spot of carrots, the reduction of the disease in the field and pot experiments with metalaxyl, propamocarb, and fosetyl-Al disease. (49) suggested a possible fungal component in the Further Pvthium violae investigation with cavity spot showed the disease association (32). A range Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. of of 23 Pvthium spp. produced cavities on carrots, but the relatively slow growing P. violae gave the highest percentage of carrots with cavities (8 6 ). Isolation of P. violae capable of inducing lesions on carrot roots in vitro explains the reduction in disease symptoms fungicide active following against applications members of of the metalaxyl, a Peronosporales. Previous failures to associate fungal pathogens with symptoms may have resulted from the apparently limited time during which Pvthium can be isolated (32). The isolation medium and techniques used, however, favored the growth of this genus at the expense of Phvtophthora spp. cavity spot is still (8 6 ). Clearly, the cause of the subject of controversy but the involvement of Clostridium seems to be ruled out. In many trees, both hardwoods and conifers, parts of the interior wood appear to be water-soaked and are often darker than adjacent referred to pectolytic However, as Interior facultative wood "wetwood" (46). clostridia the pectolytic wood. play results anaerobes an also were clostridia in There is condition evidence is that important role in wetwood. indicate that pectolytic, present in (80). this Whether numbers or not similar to bacteria, in particular Clostridium spp., are a primary cause of wetwood, it seems clear that they are characteristic reports 'shake', that the features trees of the suffering latter responsible for some of the disorder from (46). internal being another abnormal Moreover, wetwood and condition in Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 24 standing trees, were prevalent on poorly drained soils showed an association with conditions of poor soil aeration which would favor infection by Clostridium (46). They also had suffered injuries to the roots or root collar (85, 90). Rudd-Jones and Dowson (1950) isolated pectolytic Clostridia from rotting potato tubers; however, only recently were clostridia definitely implicated in the rotting syndrome of potatoes (45, 47, 48, 65). Despite the ability of Clostridium to cause rot alone, onset of decay is accelerated if strains of E. carotovora were present (60). D.2. Environmental conditions Roots exude organic substrates which stimulate growth and metabolic activity of aerobes (1). The combined metabolic activity of these microbes and the plant root create a high local demand for oxygen (23). Diffusion of oxygen could be severely restricted during periods of high soil-water content and be insufficient to satisfy requirements, thus creating an anaerobic micro-site around the root. Physical measurement of oxygen potential at the root surface is impractical, but the presence of persistent spores of an obligate anaerobe provides a convenient method of demonstrating that anaerobic periods must have occurred (6 6 ). This hypothesis is supported by the greater number of pectolytic Clostridium found in the rhizosphere of most carrot crops than in the surrounding soil (66). Regarding decay of potatoes, depletion of oxygen can Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 25 occur as a consequence of inadequate control of environmental conditions during storage, transport, and marketing, and can result from restricted ventilation, from exposure of tubers to temperatures of about 37 C, or from the presence of a film of water on tubers for at least several hours (46, 65). Anaerobic conditions cause an apparent decrease in tuber resistance to soft rot bacteria. Increases in tuber turgidity ruptures the suberized layer of the lenticels. This combination of conditions is favorable for rapid growth of certain pectolytic bacteria present in lenticels and for invasion of cortical tissue (65). Clostridia would be expected to thrive in environments that are oxygen-free, but they are also capable of growth in conditions that are ostensibly aerobic but in which the growth of aerobic and facultative anaerobic bacteria can create the reducing conditions required by the obligate anaerobe (46). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 26 LITERATURE CITED 1. Alexander, M. 1975. Introduction to Soil Microbiology. 2nd ed., New York, John Wiley & Sons. 473 pp. 2. Allan, E . , and Kelman, A. 1977. Immunofluorescent stain procedures for detection and identification of Erwinia carotovora var. atroseptica. Phytopathology 67:1305-1312. 3. Burkholder, W. H. 1959. The causal agents of the black stem disease of annual larkspur. Plant Dis. Rep. 43:934-935. 4. Burkholder, W. H . , McFadden, L. A., and Dimock, A. W. 1953. A bacterial blight of chrysanthemum. Phytopathology 43:522-526. 5. Burr, T.J., and Schroth, M.N. 1977. Occurrence of soft-rot Erwinia spp. in soil, and plant material. Phytopathology 67:1382-1387. 6. Campbell, W. A. 1947. A bacterial root and stem disease of guayule. Phytopathology 37:271-277. 7. Clark, C. A., and Moyer, J. W. 1988. Compendium of Sweet Potato Diseases. APS Press, St. Paul, MN. 74 pp. 8. Clark, C. A., Wilder-Ayers, J. A., and Duarte, V.1989. Resistance of sweet potato to bacterial root and stem rot caused by Erwinia chrvsanthemi. Plant Dis. 73:984-987. 9. Cochran, W. G. 1950. Estimation of bacterial densities by means of the "Most Probable Number'. Biometrics 6:105-116. 10. Cother, E. J., and Blakeney, A. B. 1987. The specific detection of indole production by Erwinia species and some other enterobacteria on agar. J. Appl. Bacteriol. 63:329-334. 11. Cuppels, D . , and Kelman, A. 1974. Evaluation of selective media for isolation of soft-rot bacteria from soil and plant tissue. Phytopathology 64:468-475. 12. De Boer, S. H . , Copeman, R. J . , and Vruggink, H. 1979. Serogroups of Erwinia carotovora potato strains determined with diffusible somatic antigens. Phytopathology 69:316-319. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 27 13. De Boer, S. H., Cuppels, D.A., and Kelman, A. 1978. Pectolytic Erwinia spp. in the root zone of potato plants in relation to infestation of daughter tubers. Phytopathology 68;1784-1790. 14. De Boer, S. H . , and Kelman, A. 1975. Evaluation of procedures for detection of pectolytic Erwinia spp. on potato tubers. Amer. Potato J. 52:117-123. 15. Denny, T. P. Differentiation of Pseudomonas svrinoae pv. tomato from p. s. svrinaae with DNA hybridization probe. Phytopathology 78:1186-1193. 16. Di, Y.B . , and Kelman, A. 1988. Modified crystal violet pectate (CVP) medium. Page 9 in: Laboratory Guide for Identification of Plant Pathogenic Bacteria. 2nd ed. Schaad, N. W . , APS Press, St. Paul, MN. 17. Dickey, R. S. 1979. Erwinia chrvsanthemi: a comparative study of phenotypic properties of strains from several hosts and other Erwinia species. Phytopathology 69:324-329. 18. Dickey, R. S. 1981. Erwinia chrvsanthemi: Reaction of eight plant species to strains from several hosts and to strains of other Erwinia species. Phytopathology 69:324-329. 19. Dickey, R. S., Zumoff, C. H . , and Uyemoto, J. K. 1984. Erwinia chrvsanthemi: Serological relationships among strains from several hosts. Phytopathology 74:13881394. 20. Dickey, R. S., Claflin, L. E . , and Zumoff, C. H. 1987. Erwinia chrvsanthemi: Serological comparisons of strains from Zea mavs and other hosts. Phytopathology 77:426-430. 21. Dickey, R. S., and Victoria, J. I. 1980. Taxonomy and emended description of strains of Erwinia isolated from Musa paradisiaca Linnaeus. Int. J. Syst. Bacteriol. 30:129-134. 22. Dickey, R. S., Zumoff, C. H . , and Uyemoto, J. K. 1984. Erwinia chrvsanthemi: serological relationships among strains from several hosts. Phytopathology 74:13881394. 23. Drew, M. C. , and Lynch, J. M. 1980. Soil anaerobiosis, microorganisms, and root function. Annu. Rev. Phytopathol. 18:37-66. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 28 24. Elias, N. A., Wajid, S. M. A., and Bhakatavatsalam, G. 1987. Studies on bacterial leaf spot disease of tobacco. Tropical Pest Management 33:2-4, Reviewed in Rev. Plant Path. 1988, 67:40. 25. Elphinstone, J. G . , and Pérombelon, M. c. M. Contamination of progeny tubers by seed- and borne Erwinia carotovora. Potato Res. 29:77-93. 26. Garibaldi, A. 1972. Research on carnation bacterial wilt disease: Survival in soil of Erwinia chrvsanthemi. agent of bacterial slow wilt. Actos III Congresso du Unia'o Fitop. Mediterr. 29:32 in Haygood, R. A., Strider, D. L . , and Echandi, E. 1982. Survival of Erwinia chrvsanthemi in association with Philodendron selloum. other greenhouse ornamentals, and in potting media. Phytopathology 72:853-859. 27. Goto, M. 1979. Bacterial foot rot of rice caused by a strain of Erwinia chrvsanthemi. Phytopathology 69:213216. 28. Graham, D. C. 1964. Taxonomy of the soft-rot coliform bacteria. Annu. Rev. Phytopathol. 2:13-42. 29. Graham, D.C., and Harrison, M.D. 1975. Potential spread of Erwinia spp. in aerosols. Phytopathology 65:739-741. 30. Graham, B.C., Quinn, C.E., and Bradley, L. F. 1977. Quantitative Studies on the generation of aerosols of Erwinia carotovora var. atroseptica by simulated raindrop impaction on blackleg-infected potato stems. J. Appl. Bacteriol. 43:413-424. 31. Graham, B.C., Quinn, G.E., Sells, I. A., and Harrison, M. B. 1979. Survival of strains of soft rot coliform bacteria on microthreads exposed in the laboratory and in the open air. J. Appl. Bacteriol. 46:367-376. 32. Groom, M. R . , and Perry, D. A. 1985. Induction of •cavity spot-like* lesions on roots of Baucus carota by Pvthium violae. Trans. Brit. Mycol. Soc. 84:755-757. 33. Guba, E. F . , Young, R. E . , and Ui, spot disease of carrot and parsnip. 45:102-105. 34. Harris, R. I., and Lapwood, B. H. 1978. The spread of Erwinia carotovora var. atroseptica (blackleg) from degenerating seed to progeny tubers in soil. Potato Res. 20:285-94. 1986. leaf- T. 1961. Cavity Plant Bis. Rep. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 29 35. Harrison, M.D., Franc, G.D., Maddox, D . A . , Michaud, J.E., and McCarter-Zorner, N.J. 1987. Presence of Erwinia carotovora in surface water in North America. J. Appl. Bacteriol. 62;565-570. 36. Hartman, J. R . , and Kelman, A. 1973. An improved method for the inoculation of corn with Erwinia spp. Phytopathology 63:658-663. 37. Hoitink, H. A., Herr, L. J., and Schmitthenner, A. F. 1976. Survival of some plant pathogens during composting of hardwood tree bark. Phytopathology 66:1369-1372. 38. Hugh, R . , and Leifson, E. 1953. The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various Gram-negative bacteria. J. Bacteriol. 66:24-26. 39. Jabuonski, R. E . , Takatsu, A., and Reifschneider, F. J. B. 1986. Evaluation of pathogenicity of Erwinia isolated from potato, tomato, and other host plants. Fitopatol. Bras. 11:587-597. 40. Janse, J. D., and Ruissen, M. A. 1988. Characterization and classification of Erwinia chrvsanthemi strains from several hosts in The Netherlands. Phytopathology 78:800-808. 41. Kelman, A., and Maher, E. A. 1985. Isolation and identification of the Erwinia spp. that cause soft rot. Pages 11-12, in: Report of the International Conference on Potato Blackleg Disease, ed. Graham, D. C . , and Harrison, M. D. Oxford: UK Potato Marketing Board. 42. Kikumoto, T., and Sakamoto, M. 1969. Ecological studies on the soft-rot bacteria of vegetables. VI. Influence of the development of various plants on the survival of Erwinia aroideae added to soil. Ann. Phytopathol. Soc. Japan 35:29-35. 43. Kikumoto, T., and Sakamoto, M. 1969. Ecological studies on the soft-rot bacteria of vegetables. VII. The preferential stimulation of the soft-rot bacteria in the rhizosphere of crop plants and weeds. Ann. Phytopath. Soc. Japan 35:36-40. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 30 44. Lim, w. H. pineapple Pathologie Fourth Int. France. 45. Lund, B. M. 1972. Isolation of pectolytic clostridia from potatoes. J. Appl. Bacteriol. 35:609-614 . 46. Lund, B. M. 1982. Clostridia and plant disease: New pathogens? Pages 263-283 in: Phytopagenic Prokaryotes, Vol 1, Mount, M. S., and Lacy, G. H. , ed. Academic Press, N Y . 47. Lund, B. M., and Kelman, A. 1977. Determination of the potential for development of bacterial soft rot of potatoes. Am. Potato J. 54:221-225. 48. Lund, B. M . , and Nicholls, J. influencing the soft-rotting of bacteria. Potato Res. 13:210-214. 49. Lyshol, A. J., Semb, L . , and Taksdal, G. 1984. Reduction of cavity spot and root dieback in carrots by fungicide applications. Plant Pathology 33:193-198. 50. Martin, W. J., and Dukes, P. D. 1975. A bacterial soft rot of sweet potato plants. Proc. Am. Phytopathol. Soc. 2:57. 51. Maynard, D. N . , Gersten, B . , Vlack, E. F . , and Vernell, H. F. 1961. The effects of nutrient concentration and calcium levels on the occurrence of cavity spot. Proc. Amer. Soc. Hort. Sci. 78:339-342. 52. McCarter-Zorner, N.J., Franc, G.D., Harrison, M.D., Michaud, J.E., Quinn, C.E., Sells, I.A., and Graham, D.C. 1984. Soft-rot Erwinia bacteria in surface and underground waters in southern Scotland and in Colorado, United States. J. Appl. Bacteriol. 57:95105. 53. Meneley, J.C., and Stanghellini, M.E. 1976. Isolation of soft-rot Erwinia spp. from agricultural soils using an enrichment technique. Phytopathology 66:367-370. 54. Molina, J. J . , and Harrison, M. D. 1980. The role of Erwinia carotovora in the epidemiology of potato blackleg. II. The effect of soil temperature on disease severity. Am. Potato J. 57:351-363. 1978. Survival of Erwinia chrvsanthemi on surfaces. Pages 743-746 in: Station de Végétale Phytobacteriologie, éd., Proc. Conf. on Plant Pathogenic Bacteria, Angers, C. 1970. Factors potato tubers by Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 31 55. Pérombelon, M. C. M. 1971. A quantal method for determining numbers of Erwinia carotovora var. carotovora and E. carotovora var. atroseptica in soils and plant material. J. Appl. Bacteriol. 34:793-798. 56. Pérombelon, M. C. M. 1972. A reliable and rapid method for detecting contamination of potato tubers by Erwinia carotovora. Plant Dis. Rep. 56:552-554. 57. Pérombelon, M. C. M. 1973. Sites of contamination and numbers of Erwinia carotovora present in stored seed potato stocks in Scotland. Ann. Appl. Biol. 74:59-65. 58. Pérombelon, M. C. M. 1976. Effects of environmental factors during the growing season on the level of potato tuber contamination. Phytopath. Z. 85:97-116. 59. Pérombelon, M. C. M . , Fox, R. A., and Lowe, R. 1979. Dispersion of Erwinia carotovora in aerosols produced by the pulverization of potato haulm prior to harvest. Phytopath. Z. 94:249-260 . 60. Pérombelon, M. C. M . , Gullings-Handley, J., and Kelman, A. 1979. Population dynamics of Erwinia carotovora and pectolytic clostridia in relation to decay of potatoes. Phytopathology 69:167-173. 61. Pérombelon, M. C. M . , and Hyman, L. J. 1986. A rapid method for identifying soft-rot erwinias directly from plant material based on their temperature tolerances and sensitivity to erythromycin. J. Appl. Bacteriol. 60:61. 62. Pérombelon, M. C. M . , and Hyman, L. J. 1989. Survival of soft rot coliforms, Erwinia carotovora subsp. carotovora and E. carotovora subsp. atroseptica in soil in Scotland. J. Appl. Bacteriol. 66:95-106. 63. Pérombelon, M. C. M . , and Kelman, A. 1980. Ecology of the soft-rot erwinias. Annu. Rev. Phytopathol. 18:361387. 64. Pérombelon, M. C. M . , and Kelman, A. 1987. Blackleg and other potato diseases caused by soft rot erwinias: Proposal for revision of terminology. Plant Dis. 71:283-285. 65. Pérombelon, M. C. M . , and Lowe, R. 1972. The effects of bile salts media and the age of inocula in quantitative studies of populations of Erwinia carotovora var. carotovora and E. carotovora var. atroseptica. J. Appl. Bacteriol. 34:501-506. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 32 66. Perry, D. A. 1982. Pectolytic Clostridium spp. in soils and rhizospheres of carrot and other arable crops in east Scotland. J. Appl. Bacteriol. 52:403408. 67. Perry, D. A., and Harrison, J. G. 1977. Pectolytic anaerobic bacteria cause symptoms of cavity spot in carrots. Nature 269:509-510. 68. Perry, D. A., and Harrison, J. G. 1979. Cavity spot of carrots. I. Symptomatology and calcium involvement. Ann. Appl. Biol. 93:101-108. 69. Perry, D. A.,and Harrison, J. G. 1979. Cavity spot of carrots. II. The effect of soil conditions and the role of pectolytic anaerobic bacteria. Ann. Appl. Biol. 93:101-108. 70. Phillipis, J. A., and Kelman, A. 1982. Direct fluorescent antibody stain procedure applied to insect transmission of Erwinia carotovora. Phytopathology 72:898-901. 71. Powelson, M. L. 1980. Seasonal incidence and cause of blackleg and a stem soft rot of potatoes in Oregon. Am. Potato J. 57:301-306. 72. Powelson, M. L. 1984. Soil and seed tubers as sources of inoculum of Erwinia carotovora pv. carotovora for stem soft rot of potatoes. Phytopathology 74:429-432. 73. Prévôt, A. R . , Turpine, A., and Kaiser, P. 1967. Les Bactéries Anaerobies. Dunod, Paris, 2188 pp. in: Pérombelon, M. C. M . , Gullings-Handley, J . , and fëlm=n, A. 1979. Population dynamics of Erwinia carotovora and pectolytic clostridia in relation to decay of potatoes. Phytopathology 69:167-173. 74. Quinn, C. E . , Sells, I. A., and Graham, D. C. 1980. Soft rot Erwinia bacteria in the atmospheric bacterial aerosol. J. Appl. Bacteriol. 49:175-181. 75. Rolston, L. H . , Clark, C. A., Cannon, J. M . , Randle, W. M . , Riley, E. G . , Wilson, P. W . , and Robbins, M. L. 1987. 'Beauregard' sweet potato. HortSci. 22:13381339. 76. Rudd-Jones, D . , and Dowson, W. J. 1950. On the bacteria responsible for soft rot in stored potatoes, and the reaction of the tuber to invasion by Bacterium carotovorum (Jones) Lehmann and Neumann. Ann. Appl. Biol. 37:563:569. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 33 77. 78. Scanferlato, V. s . , Orvos, D. R . , Lacy, G. H., and Cairns Jr., J. 1990. Enumerating low densities of genetically engineered Erwinia carotovora in soil. Lett. Appl. Microbiol. 10:55-59. Schaad, N. W. 1979. Serological plant pathogenic bacteria. Annu. 17:123-147. identification of Rev. Phytopathol. 79. Schaad, N.W., and Brenner, D. 1977. A bacterial wilt and root rot of sweet potato caused by Erwinia chrvsanthemi. Phytopathology 67:302-308. 80. Schink, B . , Ward, J. C . , and Zeikus, J. G. 1981. Microbiology of wetwood: Importance of pectin degradation and Clostridium species in living trees. Appl. Environ. Microbiol. 42:526-532. 81. Stanghellini, M. E. 1982. Soft-rotting bacteria in the rhizosphere. Pages 249-261 in: Phytopagenic Prokaryotes, Vol 1, Mount, M. S., and Lacy, G. H . , ed. Academic Press, NY. 82. Suzzi, G. , Papa, F . , and Grazia, L. 1987. Pectolytic Clostridia isolated from sugar beet pulp silages in Italy. J. Appl. Bacteriol. 63:481-485. 83. Tomlinson, D. L . , and Cox, P. G. 1987. A new disease of cardamom (Elettaria cardamomum) caused by Erwinia chrvsanthemi in Papua New Guinea. Plant Pathology 36:79-83 in Rev. Plant Path. 198 :365, Abstract. 84. Ward, L. J . , and De Boer, S. H. 1990. A DNA probe specific for serologically diverse strains of Erwinia carotovora. Phytopathology 80:665-669. 85. Ward, J. C . , Kuntz, J. E . , and McCoy, E. M. 1969. Bacteria associated with "shake" in broadleaf trees. (Abstr.) Phytopathology 59:1056. 86. White, J. G. 1986. The association of Pvthium with cavity spot and root dieback of carrots. Appl. Biol. 108:265-273. 87. Woodward, E. J . , and Robinson, K. 1990. An improved formulation and method of preparation of crystal violet pectate medium for detection of pectolytic erwinia. Lett. Appl. Microbiol. 10:171-173. 88. Yakrus, M . , and Schaad, N. W. 1979. Serological relationships among strains of Erwinia chrvsanthemi. Phytopathology 69:517-522. spp. Ann. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 34 89. Young, J. M., Dye, D. W., Bradbury, J. F., Panagopoulos, C. G., and Robbs, C. F. 1978. A proposed nomenclature and classification for plant pathogenic bacteria. N. Z. J. Agric. Res. 21:153-177. 90. Zeikus, J. G . , and Ward, J. C. 1974. Methane formation in living trees:A microbial origin. Science 184:11811183. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. CHAPTER II PRESENCE OF ERWINIA CHRYSANTHEMI. CAUSAL AGENT OF STEM AND ROOT ROT ON SWEETPOTATO, THROUGH THE GROWING SEASON 35 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 36 PRESENCE OF ERWINIA CHRYSANTHEMI. CAUSAL AGENT OF STEM AND ROOT ROT, ON SWEETPOTATO THROUGH THE GROWING SEASON ABSTRACT Storage roots of sweetpotato, cv. Beauregard, were inoculated at bedding by either dipping them without injuring in a suspension of a rifampicin-resistant, virulent strain of Erwinia chrysanthemi (Ech-2-rr) or by inserting a pipette tip containing 50 ^1 of the same suspension into the root. transplanting, At slips were cut or pulled and transplanted to the field two times in succession. Ech-2-rr was recovered from inoculated roots at 0 and 7 days after bedding, and at the first and second pullings. The bacterium also was present on or in symptomless vine cuttings after transplanting to the field, and in or on the underground stem, and daughter storage roots at harvest. However, little stem rot was observed in the field. Inoculation of stem cuttings at transplanting did not affect disease occurrence. There was no difference in disease occurrence when pulled transplanting, but samples pulled from respectively. When or Ech-rr was and slips cut detected cut of slips cv. were in 23% treatments Jewel used were and at cut 9% for of harvest, with a contaminated knife, Ech-2-rr was recovered from the cut stub of the sprout, from transplants at the subsequent cutting, from the surface of the mother root, and from the underground stem at harvest. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 37 INTRODUCTION Until sweetpotato recently, bacterial fIpomoea batatas (L.) stem and root rot of Lam.), caused by Erwinia chrysanthemi Burkholder, McFadden, and Dimock was unknown. In 1974, a major outbreak of this disease occurred in production areas of Georgia, and in 1975 it threatened the existence of the sweetpotato industry in that state (2, 14). In a preliminary description of the disease, it was concluded that the bacterium responsible was similar to E. carotovora (9). Eventually, it was determined that the disease of sweetpotato is caused by E. chrysanthemi (14). In Louisiana, the disease has not been found as a stem rot but has been found to a limited extent in storage roots in plant beds and the field. However, new cultivars have shown greater susceptibility to E. chrysanthemi when artificially inoculated (3, 13). Therefore, the objectives of this study were to determine a) the presence of E. chrysanthemi on sweetpotato through the growing season, b) the transmission of the bacterium from seed roots to stems and new plants, c) the effect of pulling and cutting the stem from beds with inoculated roots on transmission and disease occurrence, and d) the transmission of the bacterium to stem cuttings and/or to sprout stubs and mother roots by contaminated knives. A preliminary report on this research has been presented previously (7). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 38 MATERIAL AND METHODS Inoculum. A rifampicin-resistant, Erwinia chrysanthemi originally isolated throughout this (Ech-2-rr) from study. virulent strain of was selected from a strain sweetpotato Ech-2-rr was (Ech-2) and used pathologically and physiologically indistinguishable from the wild-type strain Ech-2 (Duarte and Clark, unpublished). Cells of the bacterium grown on nutrient broth in a rotary shaker for 24 hr at 25 C were concentrated by centrifugation and suspended in sterile distilled water (SDW). The bacterial suspensions used throughout this study were adjusted to an optical density of 0.15 at 620 nm (approx. 10^ cfu/ml). Bedding. In 1988, 1989, and 1990, storage roots of Beauregard sweetpotato were inoculated at bedding by either dipping them without injuring in a suspension of Ech-2-rr (Fig. 1) or by inserting a micropipette tip containing 50 n l of the same suspension to a depth of about 1 cm it in position and leaving (Fig. 2). There were seven randomized blocks with single, 10-root plots per treatment per block. A separate row with four roots per block of each treatment was established from which samples were taken (Fig. 3). To determine the population of Ech-2-rr on the root surface, the mother roots were sampled at four times (Fig. 4). Storage roots were dug and washed individually in plastic bags containing 100 ml of SDW (Fig. 5). Aliquots of 0.01 ml of the Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 39 serially diluted wash water were plated on circular areas of CVP-RC medium (crystal violet pectate medium amended with rifampicin and cycloheximide, 100 and 25 mg / 1, respectively) cut in agar plates with a metallic tube cap. Plates were checked for Ech-2-rr colonies after 48-hr incubation at 32 C (Fig. 6). Transplanting. At transplanting, slips were pulled or pulled and cut from beds of each treatment of mother roots and transplanted to the field two times in succession (first and second pullings) from beds mother with roots) (Fig. 4). The six treatments (pulled or cut control, were dipped planted complete block design. in or the pipette field in tip-inoculated a randomized Each treatment was replicated seven times in 10-plant plots. Sweetpotato slips were planted 30 cm apart with 90 cm between plots and 120 cm between rows. After the second pulling in 1989 and 1990, mother storage roots were dug and number of sound mother roots recorded. To assess the presence of Ech-2-rr on stem cuttings at transplanting, slips were harvested from different treatments in the plant bed and transferred individually to plastic bags with 50 ml of SDW. After at least 30 min, a 1-ml aliquot of the suspension was added to 9 ml of enrichment medium, crystal violet pectate broth (CVPB), which contained 4.5 g of sodium polypectate, 1 ml of 0.075% aqueous crystal violet, 0.5 g NaNOg, and 2.25 ml of 1 N NaOH per 500 ml of hot, distilled water (4, 12), or serially diluted and plated on CVP-RC. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 40 Aliquots of inoculated enrichment medium were plated on CVP-RC after incubating for 2 and 4 days at 32 C. Colonies were counted after incubating the plates for 48 hr at 32 C. Sprout-cutting inoculation. In another experiment conducted in the field in 1989 and repeated in 1990, cuttings from noninoculated storage roots were sprout pulled or pulled and cut and inoculated by dipping the basal end of the slip into a suspension noninoculated pulled of and Ech-2-rr; cut stems. the Each controls were treatment was replicated five times in 10-plant plots. Underground stem. At harvest, two underground stems (Fig. 7) from each plot were transferred individually to plastic bags containing 100 ml of SDW. The same procedure used to assess for presence of Ech-2-rr on storage roots was followed. Presence of the pathogen on/in daughter roots and root rot assessment. In 1988, two daughter roots from each plot were transferred individually to plastic bags containing 100 ml of SDW. After 7-day incubation at room temperature, serially diluted samples were plated on CVP-RC. Plates were checked for Ech-2-rr colonies after 48-hr incubation at 32 C. In 1989, an adaptation of a technique used with Irish potatoes to determine bacterial soft rot potential was attempted with sweetpotatoes. Two storage roots from each plot were punctured ten times at different sites with a flamed needle, placed in polyethylene bags, immersed in distilled water, and incubated at room temperature (25 C ±2) for 5 days (1). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 41 Survival in storage. In October, 1989, four crates of daughter roots from vines produced by mother roots inoculated with Ech-2-rr in March and one crate from noninoculated were stored at 18 ± 3 C from November to March, 1990. Also, 2 crates of Beauregard sweetpotato storage roots, harvested in a field other than those of the experiments, were inoculated with Ech-2-rr by immersion in a cell suspension. Presence of Ech-2-rr on storage roots was assessed in March, at bedding, and May by peeling and transferring around 1 g of root skin to tubes with 9 ml of CVPB. To recover from vines in May, 5-cm of aboveground stem was cut with a flamed scalpel, transferred to tubes with CVPB in the field, and incubated at 32 C. Aliquots of 0.01 ml were plated on CVP-RC medium after 48- and 96-hr incubation. CVP-RC plates were incubated at 32 C for 48 hr and then checked for Ech-2-rr colonies. Knife transmission. sweetpotato were planted Storage in roots of 25-cm-diameter Beauregard pots in the greenhouse. After sprouts reached about 30 cm long, they were cut with a knife previously dipped in a suspension of Ech-2-rr. After 2 mo, the presence of Ech-2-rr on stems and mother storage roots was assessed using enrichment medium as described previously. In the field, slips of Jewel sweetpotato also were cut with a contaminated knife in 1988 and 1989. Both inoculated and noninoculated treatments were replicated four times in 10-plant plots. At harvest, two underground stems were sampled Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 42 from each plot, and presence of Ech-2-rr was assessed as described previously. Survival in soil. Olivier silt loam soil was collected from Burden Plantation in Baton Rouge, sieved, and infested with a suspension of Ech-2-rr in November, 1989. Infested soil was then transferred to four 25-cm-diameter clay pots and kept outdoors during the winter. At different intervals, 5-g-soil samples were added to tubes with 9 ml of CVPB and incubated at 32 C for 48 and 96 hr. Aliquots of 0.01 ml were plated on discs of CVP-RC medium cut in agar plates with a metallic tube cap, and plates incubation at infestation, checked 32 pots C. for Ech-2-rr colonies In were April 1990, transferred 125 to days the after 48-hr after greenhouse soil and planted with sweetpotato storage roots. After 2 mo, storage roots and shoots were assessed for the presence of the bacterium as described above. Soil from Burden Plantation, Baton Rouge, LA, was sieved through a 2-mm sieve, plastic bags. Fifty-ml and 500-g quantities placed volumes of Ech-2 or in nine Ech-2-rr cell suspensions, or sterile, distilled water were added to soil in each of three bags, and one bag was incubated at 4, 25, or 37 C. Presence of Ech-2 or Ech-2-rr was assessed as described above, but including CVP without antibiotics to recover Ech-2. Field soil was sampled monthly, from July to October, 1989, for presence Ech-2-rr. Cores of soil, 2 cm in diameter and 15 cm long, were taken with a soil sampler. Four cores. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 43 from about 15 cm away from the underground stems of plants in the different treatments, (5) . In the week were combined to form one sample following harvest in 1988 and 1989, the presence of Ech-2-rr also was assessed in all plots of the second transplanting; about 500 g of soil was sampled from each plot. Presence of Ech-2-rr in the soil was assessed as described above. Survival on crate wood. Wood squares (12 x 12 x 3 mm) cut from sweetpotato storage crates were infested by submerging them in a suspension of rotted inoculated with Ech-2-rr. transferred to petri After dishes storage 30 and root min, previously squares maintained at were room temperature. Three squares from different petri dishes were transferred daily to l25-ml Erlenmeyer flasks with 10 ml of nutrient broth and shaken for 30 min. Then, 0.01-ml aliquots were plated on discs of CVP-RC medium cut in agar plates with a metallic tube cap. Colonies were counted after 48-hr incubation at 32 C. This experiment was repeated once. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 44 RESULTS Recovery during the growing season. During three seasons, mother storage roots were inoculated with E. chrysanthemi in March, and the pathogen was recovered from them the day they were bedded, pullings 7 days (Table 1) later, as well and as at the from first and underground second stems at harvest of the first and second transplantings in September and October, respectively (Table 2). The pathogen was detected on or in 15, 15, 71, 43, 29 and 15% of symptomless vines produced by mother roots suspension or inoculated inserting by dipping pipette-tips in a cell containing cell suspension in 1988, 1989, and 1990, respectively. It was not recovered from stems of noninoculated mother roots. Populations decreased of chrysanthemi on/in from March to July in plant beds ranged from approx. pulling E. in 1989, 10 to 10® cfu / cm^. mother (Fig. roots 8) ; they After the second the number of sound mother roots was not significantly different between plots of those inoculated by dipping in a cell suspension (39 roots) and plots of those inoculated with pipette tips (23 roots) but was lower than those of noninoculated mother roots (54 roots). Numbers of sound mother roots were not different among treatments in 1990. The number of plants produced by storage roots was not affected by pulling in inoculation treatments, 1989 when production was except for the significantly second reduced Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 45 (Table 3). Likewise, sweetpotato yield by weight was not affected, but the number of storage roots produced from plants of the second transplanting varied significantly among treatments in 1989 (Table 4). Little stem rot occurred in the fields during the three seasons; one or two out of seventy plants in some treatments showed symptoms. The effect of pulling vs. cutting the transplants. Erwinia chrysanthemi was recovered from 23 and 9% of underground stems of daughter plants produced from pulled or cut sprouts from mother roots inoculated at bedding (combined data from Table 2). pathogen When stems were inoculated at transplanting, the was recovered from 40, 50, 93, and 93 % of underground stems of daughter plants produced from pulled or cut transplants in 1989 and 1990, respectively. Regardless of the time of inoculation with E. chrysanthemi. no effect of pulling vs. cutting the transplants on stem rot incidence was observed in either year. Presence of the pathogen on/in daughter roots and root rot assessment. At the second harvest in 1988, E. chrysanthemi was recovered from 0, 15, and 0, and 15, 43, and 29% of sampled daughter roots from pulled and cut sprouts from mother roots noninoculated and inoculated at bedding by dipping into a cell suspension or with pipette tips, respectively. Attempts to assess root rot potential in 1989 by a polybag test failed. The incubation conditions led to a high incidence of souring, a disease with which clostridia have been associated (6). No Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 46 Ech-2-rr was recovered from rotting tissue. Survival daughter inoculated in roots storage. from with March, or in sprouts Ech-2-rr October to March, 1990. May, aboveground stems. Ech-2-rr was produced in March, not by 1989, detected mother and on roots stored from It was not recovered at bedding in 1990, However, or at harvest from the 5-cm on storage roots inoculated in October, 1989, the populations of Ech-2-rr were about 10^ cfu / g of root skin at the same sampling times, although they were not detected on the 5-cm aboveground stems. Knife transmission. When sweetpotato sprouts were cut with a contaminated knife in the greenhouse, the bacteria left on the cut stubs were recovered from the mother storage root and new sprouts two months later. When stems were cut with a contaminated knife in the field, Ech-2-rr was recovered from 6 and 4 out of 8 underground stems sampled at harvest in 1988 and 1989, respectively. It was not recovered from noninoculated control plants in either year. Survival in soil. Erwinia chrysanthemi was not recovered from soil kept in clay pots outdoors for 50 days after infestation in November, 1989, or in May, 1990, after storage roots were grown in it for 2 mo. The bacterium was not recovered from storage root surfaces or sprouts either. When soil was infested with the wild type or the mutant strain of E. chrysanthemi and incubated at 4, 25, or 37 c, only the mutant was recovered 21 days later from soil at 4 C. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 47 Neither Ech-2 nor Ech-2-rr was recovered 30 days after infestation at either incubation temperature. Erwinia chrysanthemi was not recovered from field soil sampled around the plants from any treatment from July to October, 1989, or from soil sampled after harvesting in 1988 or 1989. Survival on crate wood. The populations of the pathogen on infested crate wood decreased exponentially with time and it was not detected 9 days after infestation (Fig. 4). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 48 DISCUSSION Erwinia chrysanthemi present on or in mother roots in March, at bedding, transplanting field on or was in June-July, in symptomless transmitted to sprouts. the pathogen was vines and At taken to the detected on or in underground stems and daughter roots at harvest in SeptemberOctober. The bacteria survived the storage period on storage roots inoculated in October and were recovered in March, bedding, and May, at pulling time. These results at have important implications for the control of the bacterial stem and root rot. Three potential identified: mother roots, sources of inoculum are stem cuttings, and daughter roots that will be mother roots in the next season. A crucial issue arises as a consequence of virtual absence of disease in the field over the 3-yr period of this study. We found no evidence indicating that the mutant used in this study is less virulent than the wild type strain of E. chrysanthemi Beauregard, genotypes (Duarte and Clark, unpublished) . The cultivar, is to one of bacterial the most root rot susceptible but is sweetpotato intermediate to bacterial stem rot (3). Consequently, factors other than the presence of the pathogen or relative storage root susceptibility are likely to affect disease development in the field. This line of reasoning is supported by at least two observations. pipette tip First, bedded containing a mother high roots number of wounded bacterial with a cells Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 49 in general, did not completely rot. Second, the number of apparently intact inoculated mother roots remaining after the second pulling was lower than noninoculated ones only in 1989. Coincidently, heavy rains occurred in May-July of that year (950 m m ) . Unlike Irish potato in which contaminated mother tubers are planted in the field and are the main contamination of daughter roots by E. carotovora source of (10), the transmission of E. chrysanthemi from mother roots to daughter roots depends basically on the presence of the bacteria on or in the transplants. This study showed that the pathogen is carried on or in sweetpotato transplants to the field. The lack of disease development in the field could be attributed to the low numbers of pulled transplants. Thus, transplanting, but we (23%) or cut (9%) contaminated inoculated pulled the disease and incidence cut still slips at remained negligible. However, the presence of E. chrvsanthemi on or in underground stems of sweetpotato plants increased substantially compared to plants produced from pulled or cut sprouts from mother roots inoculated on the day they were bedded. The main advantage in using cut-sprouts or vine cuttings instead of pulled sprouts is that they do not carry Fusarium wilt, black rot, soil rot or scurf pathogens to the field (8). Even though the percentage recovery of E. chrvsanthemi at harvest from plants produced from pulled sprouts was greater Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 50 than those from cut sprouts, the importance of survival of E. chrvsanthemi at low populations should not be underestimated because only a few cells can function as primary inoculum if conducive conditions occur, as is known in Irish potato (5, 11), Thus, the importance of type of transplanting on the epidemiology of E. chrvsanthemi still needs further investigation. Contaminated tools may transmit E. chrvsanthemi to the first and, by contaminating the cut stubs, subsequent transplantings. In addition, the bacteria may be present in or on daughter roots produced from those transplantings. Evidence for this mode of transmission was provided by results of greenhouse and field experiments using knives contaminated with E. chrvsanthemi. This revealed an aspect of epidemiology of this disease interest and for which there requires further is considerable practical investigation, such as the importance of mechanical harvesters on the transmission of the bacteria from plant beds to the field. Regarding survival of E. chrvsanthemi in soil, our results agreed with those previously reported (14) that this pathogen does not survive in the soil or survive in small numbers difficult to recover. Either way, it does not seem to play an important role in the survival of the pathogen (14). However, investigation on soil conditions conducive to disease occurrence will lead to a better insight into the epidemiology of this disease. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 51 CHAPTER II TABLE 1. Number of contaminated mother roots. Number of contaminated mother roots of Beauregard sweetpotato inoculated with Erwinia chrvsanthemi (Ech-2-rr) at bedding by dipping into a cell suspension or with pipette tips Number of contaminated mother roots / total number sampled Evaluation time Year Noninoculated Dipped Pipette-tip Day zero 1988 1989 1990 0 / 5 0 / 7 0 / 7 5 / 5 6 / 7 7 / 7 3 / 5 3 / 7 7 / 7 Day seven 1988 1989 1990 0 / 5 0 / 7 0 / 7 5 / 5 6 / 7 7 / 7 3 / 5 5 / 7 7 / 7 First pulling 1988 1989 1990 0 / 5 0 / 7 0 / 7 2 / 5 5 / 7 3 / 7 1 / 5 6 / 7 2 / 7 Second pulling 1988 1989 1990 0 / 7 0 / 7 2 / 7 1 / 7 3 / 7 4 / 7 3 / 7 3 / 7 4 / 7 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 52 CHAPTER II TABLE 2. Mtunber of contaminated underground stems. Number of contaminated underground stems of Beauregard sweetpotato daughter plants produced from pulled or cut stems from mother storage roots inoculated with Erwinia chrysanthemi (Ech-2-rr) at bedding by dipping into a cell suspension or with pipette tips Number of contaminated underground stems / total number sampled Noninoculated Pulled Cut Harvest-l? Harvest-2^ y •^ Dipped Pulled Cut Pipette-tip Pulled Cut 1988 0/7 0/7 4/7 1/7 4/7 3/7 1989 0/7 0/7 0/7 1/7 1/7 1/7 1990 0/7 0/7 2/7 0/7 0/7 0/7 1988 0/5 0/5 3/5 1/5 2/5 0/5 1989 0/7 0/7 1/7 0/7 1/7 0/7 1990 1/7 0/7 0/7 0/7 0/7 0/7 Harvest of the first and second transplantings, respectively; Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 53 CHAPTER II TABLE 3. Plant production in beds. Plant production in beds of sweetpotato storage roots noninoculated or inoculated with Erwinia chrysanthemi at bedding by dipping into a cell suspension or with a pipette tip containing inoculum Number of plants / plot* Treatments 1988 1989 1990 Firsty Second First Second First Second Control 23 19 60 62 a* 34 30 Dipped 25 25 63 45 b 31 22 Pipette-tip 17 15 51 28 c 38 24 Weight of plants (kg) / plot* Control 0.86 0.44 1.72 1.37 a 1.26 0.53 Dipped 0.66 0.46 1.54 1.06 ab 1.29 0.48 Pipette-tip 0.60 0.20 1.28 0.67 b 1.45 0.45 *Mean of seven 10-root plots ypirst and second pullings =Means with the same letter for the 2nd pulling in 1989 are not significantly different according to Duncan's multiple range test (P=0,05). Differences for all other pullings were not significant (P=0.05). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 54 CHAPTER II TABLE 4. Yield Of storage roots. Yield of storage roots from plots planted with Beauregard sweetpotato plants produced from mother roots dipped into a suspension of Erwinia chrysanthemi or inoculated with inoculum in a pipette-tip at bedding and cut or pulled at transplanting Number of storage roots / plot* 1988 Treatments Control First? Second 1989 1990 First Second First Second Pulled 79 24 51 50 b^ 43 36 Cut 64 28 58 63 a 47 30 Pulled 67 28 59 64 a 51 32 Cut 73 31 57 59 ab 37 28 Pipette- Pulled 75 18 57 60 ab 42 24 tip 65 24 61 51 b 41 23 Dipped Cut kg of storage roots / plot* Control Pulled 18.4 3.9 7.6 8.3 14.0 6.7 Cut 16.4 5.3 9.3 10.6 12.6 7.8 Pulled 16.6 4.7 8.7 9.4 15.8 6.5 Cut 20.3 5.8 8.8 9.9 11.4 6.5 Pipette- Pulled 17.7 2.5 8.5 8.6 13.3 5.0 tip 20.2 4.5 8.2 9.1 14.7 5.4 Dipped Cut *Mean of seven plots ypirst and second transplantings %Means with the same letter in the same column are not significantly different according to Duncan's multiple range test; differences in other tests were not significant (P = 0.05). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 55 Fig. 2.1. Inoculation of mother storage roots by dipping. Inoculation of mother storage roots by dipping without injuring in a suspension of Erwinia chrvsanthemi (Ech-2-rr) at the time of bedding. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 56 Fig. 2.2. Inoculation of mother storage roots by micropipette tip. Inoculation of mother storage roots by inserting a micropipette tip containing 50 Ml of a suspension of Erwinia chrvsanthemi (Ech-2-rr) at the time of bedding. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 57 Fig. 2.3. Plant production bed layout. Four and ten-root plots bedded in two rows in March; one row to take samples (left) and the other (right) for plant production. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 58 PART OF PLANT MONTH SAMPLED 88-90 STAGE AT SAMPLING T R E A T M E N T S r CONTROL MOTHER ROOTS — MARCH— BEDDING -- DIPPED SEVEN DAYS AFTER PIPETTE-TIP INOCULATED APRIL ut K r CONTROL ULLED ULI MOTHER ROOTS 1-jCUT UlY FIRST --DIPPED HARVEST UuULLED LI STEM CUTTINGS PIPETTE-TIP INOCULATED r-CUT LpUULLEDl JUNE ut K r CONTROL ULLED ULI :UT MOTHER ROOTS JULY- SECOND --DIPPED PULLING HARVEST “ClLLED STEM CUTTINGS J PIPETTE-TIP INOCULATED k: :UT ULLED- AUGUST DAUGHTER ROOTS SEPT— HARVEST 1st transplanting BELOW-GROUND STEM REGION DAUGHTER ROOTS OCT- HARVEST 2nd transplanting BELOW-GROUND STEM REGION Fig. 2.4. Diagram of experiments. indicating part of plant sampled, Diagram of experiments month when samples were taken, stage at sampling, and treatments. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 59 Fig. 2.5. Storage root sampling method. A mother root dug from the bed and washed individually in a plastic bag containing 100 ml of sterile distilled water to assess for presence of Erwinia chrvsanthemi. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 60 Fig. 2.6. Isolation plating. Colonies of Erwinia chrvsanthemi after 48-hr incubation at 32 C on circular areas of CVP-RC medium cut in agar plates with a metallic tube cap. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 61 Fig. 2.7. (arrows) Sweetpotato underground stem. Underground stem of sweetpotato plants was sampled for presence of Erwinia chrvsanthemi at harvest. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 62 Populations of Erwinia chrysanthemi on Mother Roots 7 ■ Control ^ D ip p e d ---------□ Tip-inoculated DAY ZERO 6 5 7 DAYS AFTER 2ND PULUNG 4 1ST PULUNG 3 2 o D) 1 ■ X NR 0 88 89 90 88 89 90 88 89 90 88 89 90 Sampling time Fig. 2.8. Populations of Erwinia chrvsanthemi on the day of bedding, seven pullings from days later, sweetpotato and at mother the roots first and second noninoculated or inoculated at bedding by dipping in a cell suspension or with pipette; NR = not recorded. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 63 Survival in soii at three temperatures Ech-2-rr Ech-2-rr Ech-2-rr Tim e (days) Fig. 2.9. Recovery of wild type strain Ech-2 of Erwinia chrvsanthemi and a rifampicin-resistant strain Ech-2-rr from soil at three temperatures. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 64 Recovery of Erwinia chrvsanthemi from crate wood 12 10 o ay Q 8 o 6 % O CL 2 NR NR 3 4 5 6 7 9 16 20 Time (days) Fig. 2.10. Recovery of Erwinia chrvsanthemi from wood squares infested by dipping into a suspension of rotted storage root previously inoculated with Ech-2-rr, a rifampicin-resistant strain; NR = not recovered. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 65 LITERATURE CITED 1. Adams, M. J . , Hide, G. A., and Lapwood, D. H. Sampling potatoes for the incidence of diseases and levels of inoculum. Ann. App. 107:189-203. 1985. tuber Biol. 2. Clark, C. A., and Moyer, J. W. 1988. Compendium of Sweet Potato Diseases. APS Press, St. Paul, MN. 74 pp. 3. Clark, C. A., Wilder-Ayers, J. A., and Duarte, V.1989. Resistance of sweet potato to bacterial root and stem rot caused by Erwinia chrvsanthemi. Plant Dis. 73:984-987. 4. Cuppels, D . , and Kelman, A. 1974. Evaluation of selective media for isolation of soft-rot bacteria from soil and plant tissue. Phytopathology 64:468-475. 5. De Boer, S. H . , Cuppels, D. A., and Kelman, A. 1978. Pectolytic Erwinia spp. in the root zone of potato plants in relation to infestation of daughter tubers. Phytopathology 68:1784-1790. 6. Duarte, V., and Clark, C. A. 1990. Pectolytic clostridia associated with souring of sweetpotato. (Abstr.) Phytopathology 80:1030. 7. Duarte, V., and Clark, C. A. 1990. Presence of Erwinia chrvsanthemi. causal agent of bacterial stem and root rot on sweetpotato, through the growing season. (Abstr.) Phytopathology 80:1030. 8. Edmond, J. B . , and Ammerman, G. R. 1971. Sweet Potatoes: Production, Processing, Marketing, ed. The Avi Publishing Co., Westport, Connecticut. 334 pp. 9. Martin, W. J., and Dukes, P. D. 1975. A bacterial soft rot of sweet potato plants. Proc. Am. Phytopathol. Soc. 2:57. 10. Pérombelon, M. C. M. 1974. The role of the seed tuber in the contamination by Erwinia carotovora of potato crops in Scotland. Potato Res. 17:187-199. 11. Pérombelon, M. C. M . , and Kelman, A. 1980. Ecology of the soft rot erwinias. Annu. Rev. Phytopathol. 18:361387. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 66 12. Phillips, J. A., and Kelman, A. 1982. Direct fluorescent antibody stain procedure applied to insect transmission of Erwinia carotovora. Phytopathology 72:898-901. 13. Rolston, L. H . , Clark, C. A., Cannon, J. M . , Randle, W. M . , Riley, E. G . , Wilson, P. W . , and Robbins, M. L. 1987. 'Beauregard' sweet potato. HortSci. 22:13381339. 14. Schaad, N. W . , and Brenner, D. 1977. A bacterial wilt and root rot of sweet potato caused by Erwinia chrvsanthemi. Phytopathology 67:302-308. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. CHAPTER III CHARACTERIZATION OF SWEETPOTATO STRAINS OF ERWINIA CHRYSANTHEMI. CAUSAL AGENT OF BACTERIAL STEM AND ROOT ROT 67 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 68 CHARACTERIZATION OF SWEETPOTATO STRAINS OF ERWINIA CHRYSANTHEMI. CAUSAL AGENT OF BACTERIAL STEM AND ROOT ROT ABSTRACT Thirteen strains of Erwinia chrvsanthemi. eight isolated originally from sweetpotato and five from chrysanthemum, corn, dieffenbachia, African violet, and rice, respectively, and one strain of E. carotovora subsp. were inoculated carnation, in cotton, bell rice, carotovora from bell pepper pepper, squash, corn, sweetpotato, and tomato. cabbage, soybean, cantaloupe, sugarcane, sweet Strains from hosts other than sweetpotato caused little or no disease on sweetpotato roots and stems. Based on stem rot index, most sweetpotato strains were more virulent on tomato, bell pepper, and sweetpotato plants than the other strains, except a rice strain which showed bell similar sweetpotato virulence strains tomato and bell on produced pepper. greater stem rot pepper than on sweetpotato. resistant mutant of E. chrvsanthemi In (Ech-2-rr) A general, indices on rifampicinproduced 40% smaller storage root lesions than the wild type, but lesions were similar to or greater in size than other sweetpotato strains. No difference in stem rot virulence was found between mutant and wild type. Of 95 carbon sources tested, sweetpotato strains used the same 25, were unable to grow on 57, varied on 13 substrates. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. and 69 INTRODUCTION Similarities characteristics have and been differences noted for in strains phenotypic of Erwinia chrvsanthemi Burkholder, McFadden, and Dimock from different hosts (6 , 12, 13) . Strains of E. chrvsanthemi have been tested for virulence or pathogenicity to plants or plant parts of 118 plant species or cultivars (5). Strains isolated from the same host usually were similar even though the host plants had been collected from different locations. The latter observation suggested that the hosts of E. chrvsanthemi may be attacked by specific types of the pathogen which might be recognizable by phenotypic characteristics (4). When first detected on sweetpotato, isolates of chrvsanthemi were studied primarily foridentification. E. They were pathogenic to 13 plant species in addition to sweetpotato (15). Another study investigated the reaction of sweetpotato genotypes to stem and root inoculations, and concluded that the response of stem cuttings was not correlated to the response of storage roots of the same genotypes to a strain (Ech-2) of E. chrvsanthemi (2). An important aspect of the bacterial stem and root rot that has not been investigated in detail to date has to do with the characterization of isolates of E. chrvsanthemi from sweetpotato. Antibiotic resistance has been used in ecological studies of several bacterial plant pathogens resistant strain of E. chrvsanthemi (18). A (Ech-2-rr) rifampicinwas used to Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 70 monitor the pathogen during the sweetpotato growing season (7) . Bacterial resistance to rifampicin, generally mediated by a mutation in the p subunit of RNA polymerase (16), has a chromosomal nature which affords greater stability than occurs with plasmid-borne markers and is also advantageous since the mutation is not easily transferable (3). Although antibioticresistant mutants have identical to wild types been (18), shown to in one virulence also has been reported (14). maintain virulence case a reduction of Thus, it is necessary to thoroughly compare the mutants to the wild type. This paper (a) compares virulence on sweetpotato among sweetpotato and other strains of E. chrvsanthemi. (b) tests strains for pathogenicity on different hosts, (c) compares utilization of carbon sources by strains, and (d) compares a rifampicin-resistant strain to the wild type using these tests. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 71 MATERIALS AND METHODS Inoculum. The host, Identification number, location, and source of strains of E. chrvsanthemi and E. carotovora subsp. carotovora used are presented in Table 1. Cells of the bacteria grown on plates of yeast extract-dextrose-calcium carbonate agar (10, 20, 20, and 15 g/L, respectively) at 32 C for 24-48 hr were suspended in sterile distilled water. The suspensions were adjusted to an optical density of 0.15 at 620 nm (approx. 1 0 ^ cfu / ml). Inoculation. To test for pathogenicity, five plants per bacterial strain, unless otherwise specified, of bell pepper {Capsicum annuum L.) oleracea cantaloupe (Dianthus morifolium var. 'California Wonder', capitata fCucumis melo L.) Jersey Hemsl.), chrysanthemum cotton (Brassica Wakefield', L.) 'Hales Best Jumbo', carvophvllus) , (Ramat) 'Early cabbage carnation fChrysanthemum fGossvoium hirsutum L.) 'HG-660', rice fOrvza sativa L.) 'Lemont', squash fCucurbita moschata 'Early (Duschene) Duschene) squash), soybean (Glycine max (L.) Merr.) fSaccharum L. hybrid) L.'Golden Queen'), 'CP70-321', sweetpotato Golden' (crookneck 'Davis', sugarcane sweet corn (Ipomoea batatas fZea [L.] mays Lam.) 'Beauregard' and 'Jewel', and tomato fLvcopersicon esculentum Mill.) in 'Walter' were grown (five per 15-cm-diameter clay pot) sand-soil-Jiffy Mix mixture (1:1:1) in the greenhouse. Sugarcane and chrysanthemum rooted cuttings and bell pepper, cabbage, cantaloupe, carnation, cotton, squash, soybean, sweet Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 72 corn, and tomato plants were 15- to 30-days-old at inoculation. Rice plants were grown to the tillering-booting stages before inoculation, and pots were kept in a 5-cm layer of water. Terminal cuttings about 25-30 cm long were taken from sweetpotato vines growing in the field and grown for 1 wk in the greenhouse before inoculation. Toothpicks previously dipped in bacterial suspension were inserted into stems of plants and left in position (Fig. 1). Noninfested toothpicks were inserted in control plants. Seven days after inoculation, 30 days for rice and sugarcane, stems were cut open longitudinally and severity of stem rot was recorded using the following rating system; 0 = no symptoms, inoculation, = 1 2 = localized and inoculation, 4 at the point of localized necrosis extending up to 1-2 cm from point of inoculation, inoculation necrosis decay 3 = stem collapsed at point of extending stem 2-5 decayed cm but from point = most of green remaining at apex (Fig. 2), and 5 = plant dead of tissue (2). Trials were performed two times unless otherwise specified. Storage root inoculations. Sweetpotato storage roots were inoculated by inserting a micro-pipette tip containing 50 fx l of serially diluted cell suspension of each strain to a depth of about 1 cm and leaving it in position (9). The inoculated roots were placed in plastic vegetable baskets, that were stacked, covered with a black polyethylene bag, and incubated at 25-28 C for 6 days. The roots were then cut in cross Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 73 section through the point of inoculation (Fig. 3), and the depth and diameter of each lesion was measured (2 ). EDgQ, the inoculum concentration that gave lesions in 50% inoculations, was estimated from plots of the log^o each dilution versus probit response cfu of (converted percentage of inoculations producing lesions) of from (2). Regression analysis was performed to determine if there was a significant correlation between inoculum concentration and response probit. Carbon source utilization. The carbon source utilization profiles of the 13 strains of E. chrvsanthemi and 1 strain of E. carotovora subsp. carotovora were obtained using 95-test microplates (GN MicroPlate ). Twenty-four-hr-oId tryptic soy agar cultures of E. chrvsanthemi strains were transferred to tubes containing normal saline (0.85% NaCl) using sterile, cotton-tipped swabs. The bacterial concentration was adjusted to an optical density of 0.17 ±0.01 at 590 nm. Microplates were inoculated by filling all wells with 150 i i l of bacterial suspension and incubated at 27 C. Microplates were read after 4 hr and 24 hr; results are based on the 24-hr reading. The process of matching the metabolic pattern of the strains was performed with the aid of Biolog's computer software package, MicroLog (10). Biochemical tests. D-trehalose is one of the carbon sources of the microplate system described above. Thus, the results of testing for production of acid from that sugar was Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 74 Obtained from there. slices (2 ), and Rotting of potato phosphatase (1 ) were (8 ) and sweetpotato tested following procedures reported elsewhere. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 75 RESULTS Steu rot index. Based on stem rot index, most sweetpotato strains of chrysanthemi were more virulent on sweetpotato, tomato, and bell pepper plants than other strains (Fig. 4-6). In general, sweetpotato strains produced greater stem indices on bell pepper and tomato than on sweetpotato. sweetpotato strains, the rice strain (Ech-24) rot Like killed bell pepper plants by 7 days after inoculation in test 1. Although the indices were lower in test 2, Ech-24 continued to perform similarly to sweetpotato strains (Fig. 6 ). Two sweetpotato strains, Ech-18 and Ech-31, caused some disease (indices > 2) on cabbage in test 1 , and the rice strain caused significantly more disease (indices 2 and > 4) than all other strains in test 1 and 2 (Fig. 7). Stem between rot indices Ech-2-rr sweetpotatoes (Fig. were and Ech-2 4), not on significantly Beauregard different and Jewel but they were lower in tests 2 on tomato (Fig. 5) and bell pepper stems (Fig. 6 ). Stem inoculations of cantaloupe, carnation, cotton, rice, squash, soybean, produced little sugarcane, or no and sweet corn with all strains disease (Table 2). Two sweetpotato strains, Ech-37 and U-09, and the rice strain, Ech-24, induced necrosis extending inoculation in more sugarcane than stems 5 cm from (Table 2). the point of Inoculation of chrysanthemum plants induced intermediate (index = 3 ) levels of disease (Table 2). Reaction of rice to low to stem Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 76 inoculation with sweetpotato strains ranged from 0 to 2; 4 strains did not induce any reaction (index = 0) Storage root inoculations. Most (Table 2). sweetpotato strains produced larger lesions than other strains when inoculated on storage roots (Fig. 8 ). Strain Ech-18 induced small lesions, similar to those sweetpotato. caused by strains from hosts other than Storage root lesions in Beauregard sweetpotato produced by the rifampicin-resistant mutant were about 40% smaller than those produced by the wild type, but lesions were similar to or greater in size than other sweetpotato strains (Fig. 8 ). The median effective dose was calculated only for Ech-2 (3.18), Ech-18 (3.60), Ech-31 (3.94), Ech-19 (2.74), and Ech-24 (3.78), which the regression significant correlation between analysis showed inoculum concentration and response probit (Table 3). Carbon sources. Of the 95 carbon sources in the MicroLog plates, all sweetpotato strains of E. chrvsanthemi used the same 25 carbon sources (N-acetyl-D-galactosamine, L-arabinose, D-fucose, D-galactose, a-D-glucose, m-inositol, D-manitol, Dmannose, D-melibiose, ^-methyl glucoside, D-raffinose, sucrose, methyl pyruvate, mono-methyl succinate, citric acid, D-galacturonic acid, D-gluconic acid, D-saccharic acid, succinic acid, L-asparagine, L-aspartic acid, glycerol, D,L-°<glycerol phosphate, glucose-l-phosphate, and glucose- 6 - phosphate). The sweetpotato strains varied on 13 (Table 4) and gave a negative reaction on the other 57 substrates. Among Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 77 negative reactions, glycogen, Tween 40, a-lactose, D- glucuronic acid, uridine, or thymidine were utilized at least by one Strain strain other than the Ech-18, which also sweetpotato was less ones virulent (Table than 4). other sweetpotato strains, was the only one not to utilize formic and bromo succinic acids (Table 4). Biochemical phosphatase trehalose, tests. positive, and unable to produce acid from D- important properties to separate E. chrvsanthemi from other Erwinia spp. isolated All eight sweetpotato strains were originally (4). All strains, from other hosts, including those macerated slices of sweetpotato storage roots and potato tubers. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 78 DISCUSSION Sweetpotato strains of E. chrvsanthemi were more virulent than strains isolated from other hosts when inoculated in storage roots or stems of sweetpotato. These results agreed with the hypothesis that in general, strains isolated from a specific host are often more virulent when reinoculated to the same species than when inoculated to other host plants (1 1 ). In addition, the heterogeneity in virulence present among sweetpotato strains either for sweetpotato root or stem rot should be considered in selection of strain(s), from one or more locations, for evaluation of sweetpotato germplasm. The greater virulence of sweetpotato strains on tomato and bell pepper than on sweetpotato stems increases the credence that many strains of E. chrvsanthemi often are not limited to causing disease only in plants from which they have been isolated. It seems likely that the plant from which a strain was isolated may not necessarily reflect the host in which the strain originally occurred (5). Based on the results of infectivity titration, the Diffenbachia strain, Ech-19, was the most virulent. However, the dimension of storage root lesions produced by that strain does not support this assertion. The common substrates by utilization sweetpotato of 25 strains and variability suggests there on 13 are no striking differences in utilization of carbon sources among these strains. This is supported by similarity coefficients Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 79 with the stains of E. chrvsanthemi used to compile the Microlog data base. The utilization of formic acid is dependent on an enzyme system known as formic hydrogenlyase. When this enzyme system is absent, production the and fermentation with the of sugar production of occurs formic without acid as gas an important end product (17). Ech-18, a sweetpotato strain of E. chrysanthemi. and Ecc-44, a bell pepper strain of E. carotovora subsp. carotovora were the only strains which did not utilize formic acid. According to the E. chrvsanthemi profile (updated metabolic profiles furnished by BIOLOG, Inc., October, 1990), 78% of tested strains utilized lactate as a carbon source. In another study, 10 sweetpotato strains of E. chrvsanthemi were reported as producing acid from lactose (15), although the configuration for lactose was not mentioned. None of the eight sweetpotato strains in this study utilized a-lactate. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 80 CHAPTER III TABLE 1. Sources of Erwinia strains Bacterial species Echf Eccf Original Strain host Geographical Provided origin by Sweetpotato Ech-2 NC Moyer Sweetpotato Ech-2-rr NC Duarte Sweetpotato Ech-18 GA Dickey Sweetpotato Ech-26 GA Dickey Sweetpotato Ech-28 GA Dickey Sweetpotato Ech-31 LA Duarte Sweetpotato Ech-37 GA Duarte Sweetpotato U-09 TX Philley Chrysanthemum Ech-15 PA Dickey Corn Ech-17 NC Dickey Dieffenbachia Ech-19 CA Dickey African violet Ech-21 FL Duarte Rice Ech-24 JAPAN Dickey Bell pepper Ecc-44 LA Duarte %Ech = Erwinia chrvsanthemi; Ecc = Erwinia carotovora subsp. carotovora Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 81 CHAPTER III TABLE 2. Comparison of strains for stem rot indices. Host reactions to inoculation with Erwinia chrysanthemi strains and E. carotovora subsp. carotovora rot inde%y »^ stem Strain Spx pq X CT CH CR SC RC SQ Ech-2 + + NT NT 0 1 1.8 0 0 1.0 ab Ech-2-rr + + 1 2 0 0 2 0 0 0.7 b Ech-18 + + 1 3 0 1 0 0 0 1.3 ab Ech-26 + + 0 1 0 0 0 0 0 NT Ech-28 + + 1 3 0 1 0 0 0 NT Ech-31 + + 1 3 0 0 0 0 0 1.3 ab Ech-37 + + NT NT 0 3 2 0 0 0.7 b u-09 + + NT NT 0 3 1.5 0 0 0 b Ech-15 + + 1 NT 0 NT NT 0 0 0 b Ech-17 + + 2 1 0 0 0 0 0 1.3 ab Ech-19 + + 1 1 0 NT NT 0 0 0.3 b Ech-21 + + 1.5 NT 0 NT NT 0 0 0 Ech-24 + + 1 1 0 3 2.5 0 0 2.3 a Ecc-44 + + 1 0 0 NT NT 0 0 1.0 ab so CO b *SP = slices of storage root of Beauregard sweetpotato; PO = slices of potato tuber (- = no soft rot; + = soft rot); yRated on a scale of 0-5, where 0 = no symptoms and 5 = plants dead. NT = not tested; CT = cotton, 2 plants; CH = chrysanthemum, 1 plant; OR = carnation, 2 plants; SC = sugarcane, 1 plant; RC = rice, 4 plants; SQ = squash, 5 plants; CO = sweet corn, 4 plants; SO = soybean ^Means in the same column followed by a common letter are not significantly different(Duncan's multiple range test, P = 0.05). Statistical analysis was not performed with other data. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 82 CHAPTER III TABLE 3. Estimate of median effective dose. Estimate of median effective dose (EDgg) from the linear regression equation of the log^o of cfu of strains versus probit responses Strain P > F Ech-2 0.05 Ech-2-rr NS= Ech-18 0.01 Ech-26 NS Ech-28 NS Ech-31 0.05 Ech-37 NS U-09 NS Ech-15 NS Ech-17 NS Ech-19 0.05 Ech-21 NS Ech-24 0.01 Ecc-44 NS r2 Regression equation ED 50 0.90 Y = 1.32 X + 0.79 3.18? 0.97 Y = 2.75 X - 4.90 3.60 0.89 Y = 2.30 X - 4.07 3.94 0.99 Y = 2.60 X - 2.16 2.74 0.94 Y = 1.36 X + 0.16 3.78 yiiog^o bacterial population = effective median dose ^NS = not statistically significant Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 83 CHAPTER III TABLE 4. Tests Of carbon source utilization. Tests of carbon source utilization that varied among strains of Erwinia chrysanthemi and g. carotovora subsp. carotovora (Ecc-44) Carbon D G T e 1 w X y e t c e r o n i g n e 4 n 0 source C a M D P e — a - s 1 1 1 m i 1 a t e c D D C - - i r s s a o o c o 1 o f r a b t s i s f b c i o e b e i i o o s i n t n s e o o o i e s 1 t s e e i c F o r m i c a c i d a c i d D D M t a g L 1 1 - o u 1 n c a i u c c r t o i a n c c i i c a d c a i c d i d B S L r u o c g m c 1 o i u n t s i a u c m c i c a c i c n i a i d c c i d a c i d + - + + + + + + + + + + + + + - Strain? Ech-2 Ech-2-rr Ech-18 Ech-26 Ech-28 Ech-31 Ech-37 U-09 Ech-15 Ech-17 Ech-19 Ech-21 Ech-24 Ecc-44 - + - - - + - - - + - - - - + + + + + + + + + + + + + + + + + + + - + + + + - - + + — + + - + + - + + + + + + + + + + + + + + + + - + + + + + + + + + + + + + + + + + + - + + + + + + + + + + + + + + + - + + + + + + + + + + + + + + + + + + + + + + + + + - + + + + + + + + + + + + + + + + + + + + + + - - - + + + + + + + + + + + + + + + + + + + + + L U T G - r h 1 s i y U e d m C r i i o i n d s n e i e e n e 1 + + + + + + + + + S t a t i s S i m i 1 . a r i t - s y P h U b o g s p h a t e r o u P + + + + + + + + + — + + + + - + + + + — A A A A A A A A B A A A B - + - t V a 1 u e s .84 .81 .63 .53 .71 .67 .50 .76 .70 .58 .86 .78 .87 .55 ?Ech-2 to U-09 from sweetpotato; Ech-15 to Ecc-44 from other hosts z+ = positive reaction; - = negative reaction Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 84 Fig. 3.1. Toothpick inoculation. Sweetpotato stems inoculated with toothpicks previously dipped in Erwinia chrvsanthemi suspension. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 85 Fig. 3.2. stem rot index. Sweetpotato plant with most of stem decayed but green tissue remaining at apex; stem rot index = 4. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 86 Fig. 3.3. storage root inoculation. Sweetpotato storage roots cut in cross section through the point of inoculation with pipette tip containing Erwinia chrvsanthemi suspension. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 87 Comparison of strains for sweetpotato stem rot 100 LSD - 0.57 04 P- 0.0001 4 80 C.V. - 52% O) R®- 0.78 40 Ü Ech-2 Ech-18 Ech-28 Ectv37 Ech-15 Ech-19 Ech-24 Ech-2-fr Ech-26 E cM I IW » Ech-17 Ech-21 Eco44 Strain 100 LSD - 0.45 04 Jewel Sweetpotato P ■ 0.0001 C.V. - 33% 4 80 R®« 0.87 -- L g Q 40 p 20 Ech-2 Ech-18 Ech-28 Ech-37 Ech-2-fr Ech-26 Ech-31 Ech-15 Ech-17 Ech-24 Ecc-44 Ech-21 Strain Fig. 3.4. Comparison of strains for sweetpotato stem rot indices. Stem reactions of Beauregard and Jewel sweetpotatoes to inoculation with strains of Erwinia chrvsanthemi from sweetpotato (Ech-2 to U-09), chrysanthemum (Ech-15), corn (Ech-17), Dieffenbachia (Ech-19), African violet (Ech-21), and rice (Ech-24), and with a strain of E. carotovora subsp. carotovora from bell pepper (Ecc-44). Stem rot index: 0 = no symptoms, 5 = dead plant. Reproduced with permission o f the copyright owner. Further reproduction prohibited without permission. 88 LSD - 0.57 Tomalo TMtl P • 0.0001 C.V. -16% R®«0.03 40 O NT NT —I --1 — "r- "i“— r E c h -2 E c h -1 8 E c h -2 8 E c h -3 7 E c h -1 5 E c h -1 9 E c h -2 4 E c h - 2 - r r E c h -2 6 E c h -3 1 U -0 9 E c h -1 7 E c h -2 1 E c c -4 4 Strain 5T LSD > 0.9 Tomato Teal 2 P - 0.0001 l< C C.V. - 31% R®- 0.88 s ' + 40 Ü I' E c h -2 E c h -1 8 E c h -2 8 E c h -3 7 E c h -1 5 E c h -1 9 E c h -2 4 E c h - 2 - r r E c h -2 6 E c h -3 1 U -0 9 E c h -1 7 E c h -2 1 E c c -4 4 Strain Fig. 3.5. Comparison of strains for tomato stem rot indices. Stem reactions of tomato to inoculation with strains of Erwinia chrvsanthemi from sweetpotato (Ech-2 to U-09), chrysanthemum (Ech-15), corn (Ech-17), Dieffenbachia (Ech-19), African violet (Ech-21), and rice (Ech-24), and with a strain of E. carotovora subsp. carotovora from bell pepper (Ecc-44). Stem rot index: 0 = no symptoms, 5 = dead plant. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 89 5T Bell peppe Testi LSD = 0.57 C P = 0.0001 C.V. = 10% i ’ 40 O ë' NT NT 0 .1- '^— - 'f— -T-— I---- 1— " r • '" f " ‘ ^ r ‘— I— "T-— I— ^ Ech-2 Ech-18 Ech-28 Edv37 Edi-15 Ech-19 Ech-24 Ech-2-rr Ech-26 Ech-31 U-09 Ech-17 Ech-21 Eoo44 Strain 100 LSD = 1.0 Bell peppei Test 2 P = 0.0019 C.V. = 68% CD R®= 0.51 Ech-2 Ech-18 Ech-28 Ech-37 Ech-15 Ech-19 Ech-24 Ech-2-rr Ech-26 Ech-31 U-09 Ech-17 Ech-21 Eco-44 Strain Fig. 3.6. Comparison of strains for bell pepper stem rot indices. Stem reaction of bell pepper to inoculation with strains of Erwinia chrvsanthemi from sweetpotato (Ech-2 to U 09), chrysanthemum (Ech-15), corn (Ech-17), Dieffenbachia (Ech-19), African violet (Ech-21), and rice (Ech-24), and with a strain of E. carotovora subsp. carotovora from bell pepper (Ecc-44). Stem rot index: 0 = no symptoms, 5 = dead plant. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 90 100 LSD m 0.83 Ic P > 0.0001 C.V. - 36% ■ -4 80 D) R * - 0.66 ■e E 40 P <p 35 NT NT Ech-2 Ech-18 Ech-28 Ech-37 Ech-15 Ech-19 Ech-24 Ech-2-rr Ech-26 Ech-31 U-09 Ech-17 Ech-21 Ecc-44 Strain 100 5 LSD « 0.5 P - 0.0001 0 4 •D 80 C E I u> 3 60 2 40 P 1 0 m Ech-2 Ech-18 Ech-28 Ech-37 Ech-15 Ech-19 Ech-24 Ech-2-rr Ech-26 Ech-31 U-09 Ech-17 Ech-21 Ecc-44 Strain Fig. 3.7. Comparison of strains for cabbage stem rot indices, stem reaction of cabbage to inoculation with strains o f Erwinia chrvsanthemi from sweetpotato (Ech-2 to U - 09), chrysanthemum (Ech-15), corn (Ech-17), Dieffenbachia (Ech-19), African violet (Ech-21), and rice (Ech-24), and with a strain of E. carotovora subsp. carotovora from bell pepper (Ecc-44). Stem rot index: 0 = no symptoms, 5 = dead plant. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 91 Comparison of strains for storage root lesion dimension Beauregard Storage root LSD = 4.2 P = 0.0001 C.V. = 90% Ech-2 Ech-18 Ech-28 Ech-2-rr Ech-26 Ech-37 Ech-31 Ech-15 U-09 Ech-19 Ech-17 Ech-24 Ech-21 Ecc-44 Strain Fig. 3.8. Dimension of storage root lesions produced by inoculation with strains of Erwinia chrvsanthemi from sweetpotato (Ech-2 to U-09), chrysanthemum (Ech-15), corn (Ech-17), Dieffenbachia (Ech-19), African violet (Ech-21), and rice (Ech-24), and with a strain of E. carotovora subsp. carotovora from bell pepper (Ecc-44). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 92 LITERATURE CITED 1. Barber, M . , and Kuper, S. W. A. 1951. Identification of Staphvlococcus pyogenes by the phosphatase reaction. J. Pathol. Bacteriol. 63:65-66. 2. Clark, C. A., Wilder-Ayers, J. A., and Duarte, V. 1989. Resistance of sweet potato to bacterial root and stem rot caused by Erwinia chrvsanthemi. Plant Dis. 73:984-987. 3. Compeau, G . , Al-Achi, B. J., and Platsouka, E . , and Levy, S. B. 1988. Survival of rifampin-resistant mutants of Pseudomonas fluorescens and Pseudomonas putida in soil systems. Appl. Environ. Microbiol. 54:2432-2438. 4. Dickey, R. S. 1979. Erwinia chrvsanthemi: A comparative study of phenotypic properties of strains from several hosts and other Erwinia species. Phytopathology 69:324-329. 5. Dickey, R. S. 1981. Erwinia chrvsanthemi: Reaction of eight plant species to strains from several hosts and to strains of other Erwinia species. Phytopathology 71:23-29. 6. Dickey, R. S., Claflin, L. E . , and Zummoff, C. H. 1987. Erwinia chrvsanthemi: Serological comparisons of strains from Zea mavs and other hosts. Phytopathology 77:426-430. 7. Duarte, V., and Clark, C. A. 1990. Presence of Erwinia chrvsanthemi. causal agent of stem and root rot, on sweetpotato through the growing season. (Abstr.) Phytopathology 80:1030. 8. Dye, D. W. Erwinia. I. 11:590-607. 9. Maher, E. A., and Kelman, A. 1983. Oxygen status of potato tuber tissue in relation to maceration by pectic enzymes of Erwinia carotovora. Phytopathology 73:536-539. 10. Marello, T. A., and Bochner, B. R. 1989. Metabolic reactions of Gram-negative species. Biolog, Inc., Hayward, CA. 105 pp. 1968. A taxonomic study of the genus The 'amylovora' group. N. Z. J. Sci. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 93 11. McIntyre, J. L., Sands, D. C . , and Taylor, G. S. 1978. Overwintering, seed disinfestation, and pathogenicity studies of the tobacco hollow stalk pathogen, Erwinia carotovora var. carotovora. Phytopathology 68:435-440. 12. Miller, H. N . , and McFadden, L. A. 1961. A bacterial disease of philodendron. Phytopathology 51:826-831. 13. Munnecke, D. E. i960. Bacterial stem Dieffenbachia. Phytopathology 50:696-700. 14. Scanferlato, V. S., Orvos, D. R . , Cairns, J. Jr, and Lacy, G. H. 1989. Genetically engineered Erwinia carotovora in aquatic microcosms: Survival and effects on functional groups of indigenous bacteria. Appl. Environ. Microbiol. 55:1477-1482. 15. Schaad, N. W . , and Brenner, D. 1977. A bacterial wilt and root rot of sweet potato caused by Erwinia chrvsanthemi. Phytopathology 67:302-308. 16. Sippel, A. E . , and Hartmann, G. R. 1968. Mode of action of rifampicin on the RNA polymerase reaction. Biochim. Biophys. Acta 157:218-219. 17. Stanier, R. Y . , Doudoroff, M . , and Adelberg, E. A. 1963. The Microbial World. 2nd ed., Prentice-Hall, Englewood Cliffs, NJ. 753 pp. 18. Weller, D . M . , and Saettler, A. W. 1978. Rifampinresistant Xanthomonas phaseoli var. fuscans and Xanthomonas phaseoli: Tools for field study of bean blight bacteria. Phytopathology 68:778-781. rot Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. of CHAPTER IV EFFECTS OF INTERACTION OF ERWINIA CHRVSANTHEMI AND FUSARIUM SOLANI ON SWEETPOTATO STEM ROT 94 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 95 EFFECTS OF INTERACTION OF ERWINIA CHRYSANTHEMI AND FUSARIUM SOLANI ON SWEETPOTATO STEM ROT ABSTRACT Jewel and Beauregard sweetpotato stem cuttings were inoculated with Erwinia chrvsanthemi and/or Fusarium solani before planting in the greenhouse and in the field. In the greenhouse, stem rot lesion length was 111% and 120% greater on Jewel sweetpotato and 29% greater on Beauregard when the two pathogens were inoculated together than the sum of means of stem lesion length produced by both pathogens inoculated separately. In the field, the percentages of sampled plants of Beauregard showing stems with rotted tissue or black streaks were greater in 1989 and 1990 when inoculated with both pathogens (66 and 20) than with E. chrvsanthemi (20 and 10) or F. solani (16 and 4) separately. When soil was kept under three soil matric potentials (0, -0.3, and -0.5 bars) greenhouse, means in the of lesion length were greater on plants inoculated with E. chrvsanthemi. alone or combined, than F. solani alone regardless of soil matric potential. When both organisms were applied to wounded storage roots, no synergism was observed. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 96 INTRODUCTION There are many accounts in the literature suggesting an association of Fusarium spp. with the potato blackleg disease (1, 5, 1, 8, 9, 10, 11). It has been hypothesized that colonization of the roots and vascular system by F. solani generally weakens the plant, making it more susceptible to the soft rot bacteria (11). Erwinia chrvsanthemi and F. solani cause bacterial stem and root rot and Fusarium root and stem canker, respectively, on sweetpotato floomoea batatas (L. ) Lam.) (2, 3, 6). Both diseases have two phases, a stem rot and a root rot phase (3). Similarities regarding occurred suggest may the plant a possible parts in which symptoms interaction between these pathogens. On the other hand, inoculations of plants in field experiments with E. chrvsanthemi and F. solani separately have failed to induce the severity of stem rot sometimes observed in the field. Furthermore, several sweetpotato samples with symptoms of both diseases have been observed. Therefore, this study was conducted to examine the results of combined effects of E. chrvsanthemi and F. solani on stem and root diseases of sweetpotato. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 97 MATERIALS AND METHODS Inoculum. Isolates Ech-2 of E. chrvsanthemi and M-10 of F. solani both isolated from sweetpotato and obtained from J. W. Moyer, Department of Plant Pathology, North Carolina State University, were used throughout this study. Twenty-four-hrold nutrient broth cultures optical density of 0.15 at of Ech-2 620 nm were (ca. adjusted lO^cfu/ml). to an Spore suspensions of isolate M-10 were prepare by washing from 5day-old potato dextrose distilled water cheesecloth. (SDW) agar (PDA) cultures with sterile and filtering through four layers of The concentration of spores was then determined with a hemacytometer and adjusted to 10® per ml. Stem inoculations, vine cuttings of Jewel sweetpotato in 1988 (Test 1 = 8/11-9/27 and Test 2 = 10/4-11/2) and Jewel and Beauregard in 1989 (Test 3 = 6/20-8/1) were cut from the field. All expanded leaves and petioles were removed and vine cuttings were inoculum, immediately dipped into Ech-2 combined inoculum, M-IO inocula with each organism at the same concentration as when inoculated alone, or distilled water (Fig. 1). Twenty five cuttings per treatment were planted in 15-cm-diameter clay pots in the greenhouse using five plants per pot in a completely randomized design. Six weeks after inoculation, roots were washed free of soil, stems were cut longitudinally, and the length of stem rot lesions was measured (Fig. 2). Plants were then dried for 48 hr at 60 C, and roots and shoots were weighed separately. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 98 In the field, sweetpotatoes were stem cuttings inoculated of Jewel as and described Beauregard above. Each treatment was replicated five times in 10-plant plots in a randomized complete block design. Cuttings were planted 30 cm apart with 90 cm between plots and 120 cm between rows. Prior to harvesting, stems of five plants in 1989 and of all ten plants in 1990 were sectioned longitudinally at the ground level incidence of stems with rotted tissue or black streaks was recorded. At 1990 harvest, the total number of plants per plot was recorded and storage roots were counted and weighed. Effect of soil matric potential on stem rot. Stem cuttings of Jewel were inoculated with E. chrvsanthemi and/or F. solani. as described above, planted in pots with soil:sand (1:1), and grown in the greenhouse under three soil matric potentials; zero, -0.3, and -0.5 bars. Four replicate pots (5 plants/pot) for each treatment were placed in a completely randomized complete design. One tensiometer was installed in one pot of each of the 12 treatments. The soil in all pots of that treatment was saturated with water each time the tensiometer indicated the respective matric potential. Six wk after inoculation, the length of stem rot lesions and plant dry weight were measured as previously described. Storage root inoculations. Storage roots were wounded by gently scraping the periderm from a spot on the median of the root with a flamed scalpel. A 5-mm-diameter plug was removed Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 99 with a flamed cork borer from the margin of a 5-day-old PDA culture of F. solani (M-10), and placed (mycelium side down) on the wound (4). Inoculation with E. chrvsanthemi was accomplished by submerging wounded storage roots in a cell suspension of 10^ cfu / ml. In the combined inoculation, inoculation with F. solani followed the bacterial inoculation. Inoculated roots were placed in plastic vegetable baskets, which were stacked, covered with a black polyethylene bag, and incubated at 25 ±2 C for 6 wk. Evaluation was made by measuring the external diameter and internal depth of each lesion (4). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 100 RESULTS Stem inoculations. In test 1 at the greenhouse, no disease was recorded on Jewel plants inoculated with F. solani alone. Lesion length of plants inoculated with E. chrvsanthemi and F. solani combined was 111% greater than those inoculated with E. chrvsanthemi alone (Fig. 3). In test 2, lesions were longer in the F. solani-inoculated treatments. than in the Ech-2 or combined The results in test 3 were similar for both Jewel and Beauregard to results for Jewel in test 1 (Fig. 3). Dry weights alone or of plants combined with noninoculated water inoculated with F. solani control in were test E. less 1 chrvsanthemi than (Table for 1). the No significant differences were found in dry weight of plants among treatments in tests 2 and 3. Field experiments. The percentages of sampled plants of Beauregard showing stems with rotted tissue or black streaks were greater in 1989 and 1990 when inoculated with both pathogens (66 and 20) than with E. chrvsanthemi (20 and 10) or F. solani (16 and 4) inoculated separately. The synergistic effect of the combined inoculation was detected on Beauregard in both years but not on Jewel remaining plants per plot (Table 2). Neither number of at harvest (Table 2) nor yield (Table 3) were significantly different for any treatment in either year (Table 3). In 1989, Beauregard sweetpotato inoculated with E. chrvsanthemi and F. solani combined (Table 3) produced more storage roots than when either was inoculated Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 101 alone. Effect of soil matric potential on stem rot. No interaction was observed between E. chrvsanthemi and F. solani on lesion length when the effect of soil matric potential was compared (Table 4). Disease level was higher on plants inoculated with E. chrvsanthemi. alone or combined, and very low with F. solani. Storage root inoculations. No interaction between E. chrvsanthemi and F. solani was found when storage roots were inoculated. Erwinia chrvsanthemi alone caused no disease while lesion dimensions on storage roots inoculated with F. solani (19.5 mm) or combined (15.5 mm) were not significantly different. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 102 DISCUSSION A synergistic interaction between E. chrvsanthemi and F. solani on length of stem rot lesion was observed in two greenhouse experiments and in two experiments conducted in the field in 1989 and 1990. This may account for the greater stem rot severity that develops in the field under natural conditions than in controlled inoculated with the individual pathogens (4). I cannot account for the lack of interaction in greenhouse test 2. It may be related to the fact that plant growth was less in test 2 thant tests 1 or 3. Differences in temperature in the greenhouse during tests 1, 2, and 3 do not appear to account for the differences in the results. The means of maximum and minimum daily temperatures were 31, 29, and 30 C in tests 1, 2, and 3, respectively. Although no interaction was found when storage roots were inoculated with E. chrvsanthemi and F. solani. this is apparently because bacterial root rot failed to develop in any treatment. The superficial wounding which favors Fusarium root rot development (4) may not be suitable for bacterial root rot development. Relative humidity was not controlled during this study, and it is expected to affect bacteria, fungi, and their interactions differently. Bacterial soft rot can be induced when pieces of surface-sterilized potato tubers are inoculated with F. roseum cultivar 'Sambucinum', F. solani f. pisi. F. solani f. phaseoli. and other fungi and incubated in a moist Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 103 chamber; soft rot was prevented by seed piece treatment with Dithane M-45, Fusarium Polyram, (9). sweetpotato Although can be and benomyl the after inoculation with development restricted by the of F. solani on ring to vascular superficial lesions within the cortex of the root (4), the presence of a soft rot bacterium such as E. chrvsanthemi and adequate environmental conditions are expected to be conducive to root rot disease. Furthermore, in addition to breaking the storage root barrier, an effect of F. solani similar to that observed pieces on potato with fungus tuber, in which trigger inoculation bacterial soft of rot, potato can postulated and investigated on sweetpotato. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. be 104 CHAPTER IV TABLE 1. Dry sweetpotato weight of cultivars inoculation with plants. Jewel and Dry weight of Beauregard plants 6 wk of after Erwinia chrysanthemi and/or Fusarium solani under greenhouse conditions Dry weight of plants (g)^’^ Test 1 Test 2 Test 3 Jewel Jewel Jewel Control 18.1 2.5 33.6 32.6 Ech 12.3 2.7 32.1 34.6 Fs 14.7 2.2 25.2 30.0 Ech + Fs 10.1 2.8 30.6 27.5 LSD 3.8 0.9 6.1 P 0.006 0.46 0.16 CV (%) 20 25 21 Beauregard ^Mean of five 5-plant pots. Plants were dried for 48 hr at 60 C. ^ Means of test 3 are compared within the two columnr. Reproduced with permission of the copyright owner Further reproduction prohibited without permission. 105 CHAPTER IV TABLE 2. Disease incidence and Incidence remaining and remaining plants at plants. harvest Disease for Jewel and Beauregard sweetpotatoes inoculated in the field with Erwinia chrysanthemi and/or Fusarium solani at transplanting Plants per plot with Remaining plants stem rot symptoms? per plot= 19 19 8 9 9 0 19 9 0 Beauregard Jewel Beauregard Jewel Beauregard Jewel Control 0.4 0.0 0.0 0.0 9.0 8.0 Ech 1.0 1.0 0.5 0.0 7.7 7.6 Fs 0.8 0.8 0.2 0.0 8.4 9.0 Ech + Fs 3.3 1.4 1.0 0.2 8.5 9.2 LSD 2.0 0.4 1.5 P > F 0.01 0.04 0.79 CV (%) 131 181 19 ^Mean of five 10-plant plots. Five plants per plot in 1989 and all ten plants in 1990 were sampled. Either soft rot vascular discoloration were counted as stem rot symptoms. ^Plants counted at harvest. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. or 106 CHAPTER IV TABLE 3. Effect on sweetpotato yield. Yield of Jewel and Beauregard sweetpotatoes inoculated with Erwinia chrvsanthemi and/or Fusarium solani at transplanting Weight (kg) of storage roots/ plot? 19 8 9 Jewel Beauregard Control Ech Fs Ech + Fs 1 9 9 0 5.6 6.1 5.1 7.4 Beauregard 13.1 9.8 13.6 10.6 3.6 3.2 4.0 3.2 Jewel 8.7 6.1 7.8 6.6 Number of storage roots / plot^’^ Control Ech Fs Ech + Fs 40 54 49 74 b-d b be a 33 38 39 34 38 37 44 36 d Cd cd d 36 26 22 28 ^Mean of five 10-plant plots =Means within each pair of columns for each year and parameter followed by the same letter are not significantly different using Duncan's multiple range test; differences in other tests were not significant (P = 0.05). Pr > F 1990 1989 Source Block Cultivar Treatment Cv * Trt Kg/plot #/plot kg/plot #/plot 0.4685 0.0001 0.6451 0.1762 0.3085 0.0001 0.0486 0.0388 0.8034 0.7241 0.2172 0.6246 0.4976 0.0004 0.3104 0.1780 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 107 CHAPTER IV TABLE 4. Effect Of soll matric potential. Effect of soil matric potential on interaction between Erwinia chrvsanthemi and Fusarium solani on plant growth and stem rot lesion length Dry weight (g) Soil matric potential (bars) Inoculation Root Shoot Control Ech Fs Ech+Fs Control Ech Fs Ech+Fs Control Ech Fs Ech + Fs 47.Or^ 12.4 14.7 13.9 4.4 5.9 5.2 6.5 3.3 4.0 3.2 2.5 0.0 -0.3 — 0 .5 combined combined combined Combined Combined Combined Combined Control Ech Fs Ech + Fs 0.0 -0.3 — 0 .5 Root + Shoot 9.8 10.1 13.4 11.9 8.4 8.5 9.6 9.3 6.2 6.1 5.3 5.2 Lesion length (mm) 56.9 22.6 28.1 25.9 12.9 14.4 14.8 16.1 9.5 10.5 8.6 7.7 0.0 36.0 0.0 21.5 0.0 15.0 0.0 26.7 0.0 46.5 1.7 40.7 22.0 a 11.3 a 5.5 b 9.0 b 3.3 b 5.7 c 33.4a 14.6 b 9.1b 14,4 10.4 21.5 18.3 7.5 7.7 7.7 26.5 15.9 17.2 16.6 0.0 31.5 0.6 29.7 8.2 8.3 9.5 8.8 b a b a ^Means within a column followed by the! same letter are not significantly different using Duncan's multiple range test; differences in other tests were not significant (P =: 0.05). Combined = treatments combined Pr > F Source Root Shoot Inoculation (A) 0.417 0.464 0.440 0.001 0.014 0.000 0.001 0.422 0.374 0.455 0.375 0.839 Soil matric pot. A X B 2 C. V. r (%) (B) 0.34 181.52 0.62 25.30 Root + Shoot 0.41 94.40 Lesion 0.39 154.60 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 108 Fig. 4.1. Vine cutting Inoculation. Inoculation by dipping the sweetpotato vine cuttings in cell and/or conidial suspension of Erwinia chrvsanthemi and Fusarium solani. respectively. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 109 Fig. 4.2. Stem rot lesions on sweetpotato. Sweetpotato stem cuttings showing stem rot lesions of different lengths 6 wk after inoculation with Fusarium solani. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 110 Length of stem rot lesions 100 □ Control □ Ech 80 □ Fs 0 Ech+Fs - 80 £ 60 E. LSD >28 LSD > 9.9 LSD -1 4 .3 •P > 0.0001 P - 0.0005 P > 0.0001 C.V. > 64% C.V. > 53% C.V. > 80% f 40 QL O) II 20 0 60 i 20 / / / 1 (Jewel) / 3 (Jewel) 2 (Jewel) 3 (Beauregard) Test Fig. 4.3. Length of stem rot lesions on plants 6 wk after inoculation in the greenhouse with Erwinia chrysanthemi (Ech) and or Fusarium solani (Fs) Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. Ill LITERATURE CITED 1. Blodgett, E. C. 1947. Comments on black rot, a storage disease of potatoes in Idaho. Plant Dis. Rep. 31:10-13. 2. Clark, C. A. 1980. End rot, surface rot, and stem lesions caused on sweet potato by Fusarium solani. Phytopathology 70:109-112. 3. Clark, C. A., and Moyer, J. W. 1988. Compendium of Sweet Potato Diseases. APS Press, St. Paul, MN. 74 pp. 4. Clark, C. A., Randle, W. M . , and Pace, C. S. 1986. Reactions of sweet potato selections to Fusarium root and stem canker caused by Fusarium solani. Plant Dis. 70:869-871. 5. Davis, J. R . , Sorensen, L. H . , and Corsini, G. S. 1983. Interaction of Erwinia spp. and Fusarium roseum 'sambucinum' on the Russet Burbank potato. Amer. Potato J. 60:409-421. 6. Moyer, J. W . , Campbell, C. L . , and Averre, C. W. 1982. Stem canker of sweet potato induced by Fusarium sdlmi. Plant Dis. 66:65-66 7. Nielsen, L. W. 1949. Fusarium seedpiece decay of potatoes in Idaho and its relation to blackleg. Idaho Agric. Exp. Sta. Univ., Res. Bull. No. 15, 31 pp. 8 . Nielsen, L. W . , and Moyer, J. W. 1979. A Fusarium root rot of sweet potatoes. Plant Dis. Rep. 63:400-404. 9. 10. 11. Stanghellini, M. E . , and Russell, J. D. 1971. Induction of bacterial seedpiece decay of potatoes by various soil-borne fungi. (Abstr.) Phytopathology 61:1324. Zink, R. T., and Secor, G. A. 1979. The presence fungal wilt pathogens increases the incidence potato blackleg. (Abstr.) Amer. Potato J. 56:487. of of Zink, R. T., and Secor, G. A. 1982. Interaction of fungal wilt pathogens and potato blackleg. Plant Dis. 66:1053-1056. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. CHAPTER V ASSOCIATION OF PECTOLYTIC CLOSTRIDIA WITH SOURING OF SWEETPOTATO STORAGE ROOTS 112 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 113 ASSOCIATION OF PECTOLYTIC CLOSTRIDIA WITH SOURING OF SWEETPOTATO STORAGE ROOTS ABSTRACT Storage roots of Beauregard sweetpotato fIpomoea batatas) were either not treated, disinfested with 1% NaOCl, or inoculated with Erwinia chrvsanthemi (Ech-2) and half of the roots from each treatment were punctured with a flamed needle. They were then incubated for 5 days at 25 C submerged in distilled water in plastic bags. Maceration occurred in 93 and 8 , 8 and roots 0 , and from storage the roots, 100 and control, 60% of punctured and non-punctured disinfested, respectively. and Erwinia Ech-2-inoculated chrvsanthemi was reisolated only from artificially inoculated storage roots. However, forming, at least two distinguishable sulfate-reduction negative, pectolytic gelatin spore- hydrolysis positive, anaerobic bacteria resembling Clostridium spp. were found in most lesions, regardless of treatment. Clostridia were differentiated by the diameter The two (1.0 and 2.5 mm) of pitting on double-layer pectate medium. Isolates of the two Clostridia macerated sweetpotato, potato, carrot, and onion, but affected tissue became watery and no slimy masses were formed unlike the 'sticky rot' syndrome reported previously on potato. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 114 INTRODUCTION Sweetpotato, encounter Ipomoea serious economic batatas (L.) losses when Lam., growers excessive may rainfall results in water-saturated soils for several days prior to harvest. A yield loss of 82.5% of 'Centennial' was observed after storage roots were submerged under water for 72 hr (22). Typically, flood-damaged storage roots are totally decayed in the ground or exhibit shortened storage life due to excessive weight loss Genetic and rotting variation in during tolerance curing of and storage sweetpotatoes to (13). flood damage was demonstrated, but this variation is inconsistent from year to year (27). The internal atmosphere of harvested sweetpotato roots submerged in water was found to be almost exclusively CO 2 72 hr after submergence (l). Ethanol also accumulated rapidly with increasing time of soil saturation (8 ). This asphyxiation leads to a condition known as "souring", a disorder previously thought to be exclusively physiological in origin (6 ). Actually, souring is a complex of symptoms of which the most obvious are rapid maceration of tissues of the whole storage root (Fig. 1) and a strong smell of byproducts of fermentation. Although many bacteria possess the ability to produce tissue-macerating enzymes, only a few have been associated with decay of living plant tissues. spp., Bacillus subtilis. B. These meaaterium. include Erv/inia B. polvmyxa. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 115 Pseudomonas marginalis. and pectolytic strains of Xanthomonas camoestris. Pseudomonas. Clostridium spp., and Flavobacterium spp. (14, 21). Conclusive data that certain pectolytic Clostridia can cause decay in tubers in the absence of Erwinia were presented (19) , and an association between spore-forming anaerobic bacteria and rotting in potatoes , Solanum tuberosum L . , has been observed by several researchers (3, 16, 20, 26). Clostridial rots are strikingly different from those caused by E. carotovora and produce considerable slime with many gas bubbles and a distinctive odor (23). Pectolytic clostridia also have been implicated in 'wetwood', conditions in trees (17, 24, 25, 28). However, nothing has been reported on involvement of pectolytic clostridia in sweetpotato storage root rots. Moreover, they were not detected on sweetpotato in a survey for Clostridium in various crops in Japan (26). The objective of this study was to determine if pectolytic clostridia or other bacteria like E. chrvsanthemi are involved in souring of sweetpotato storage roots. A preliminary report of this research has been published (1 0 ). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 116 MATERIALS AND METHODS Effect of surface disinfestation. One hundred and twenty Beauregard sweetpotato storage roots were divided into three groups. The first group received no treatment (control), the second was dipped in a solution of 1% NaOCl for 10 min and washed in tap water (surface disinfested), and the third was dipped in a suspension (ODg2o = 0.15) of Erwinia chrvsanthemi isolate Ech-2. Twenty roots of each group were punctured ten times at different sites with a flamed needle. Then all roots were transferred distilled water, to plastic tied, bags (2/bag), and incubated flooded for 5 days with in larger plastic bags at about 25 C. This experiment was performed twice. Isolations. removing a small Pectolytic bacteria portion tissue of were at extracted the margin of by the lesion, and suspending it in sterile distilled water (SDW). Gram negative suspension on incubating the bacteria crystal plates were isolated violet pectate for 48 hr at 28 by streaking (CVP) C plates (3). the and Pectolytic Clostridia were isolated by streaking the suspension on plates of nutrient-dextrose hydrochloride (NDA) agar amended with 0.5% that had previously been cysteine stored under anaerobic conditions in order to be reduced (24 h r ) . After the plates were streaked, they were inverted and chloroform was placed in the lid so that the vapors would eliminate nonsporeforming bacteria. The NDA plates were incubated in Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. a 117 disposable environmental chamber for 48-72 hr at 32 C. The environmental chamber is a plastic bag that contains a gas generator/resazurin oxygen indicator, consisting of two tablets of potassium borohydride and sodium bicarbonate and an ampule of hydrochloric acid (2.7 N ) , two catalyst cups containing palladium catalyst, and an indicator containing an ampule of resazurin (Bio-Bag Dickinson Microbiology Systems) were incubated under aerobic Type A, Multi-Plate, Becton (2). Streaked NDA plates also conditions to check for the presence of Bacillus. Sets of 10 storage roots of Beauregard and Centennial sweetpotato harvested in Chase, LA, and Jewel and Porto Rico harvested in Baton Rouge, LA, were assessed for the presence of pectolytic clostridia and E. chrvsanthemi. All roots were punctured 10 times at different sites with a flamed needle, transferred to plastic bags (1 root/bag), and flooded with sterile distilled water. Plastic bags were tied and incubated for 5 days in larger black plastic bags at 25 ± 2 C. The isolation procedure is described above. Characterization of isolates. Besides anaerobic growth, pectolytic clostridia were identified on the basis of characteristic colony morphology and color on NDA and potato infusion agar (PIA) (16, 18), morphology of cells from a suspension of macerated tissues and in Gram stain of 10 to 16hr-old cultures, motility, catalase test after exposing the colonies to air for 1 hr, and pathogenicity tests (3, Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 4). 118 Sulfate reduction was tested using a lactate medium (yeast extract, 1 g; sodium lactate, 4 g; NH 4CI, 0.5 g; K 2HPO 4 , 1 g; MgS 0 4 .7 H 2 0 , 0.2 g; CaCl 2 .2 H 2 0 , g; 0.1 FeS0 4 .7 H 2 0 , Na 2S0 4 , 0.5 g / L) in screw-capped tubes tested by cysteine inoculating nutrient hydrochloride migration and broth 0.4% g; (11). Motility was amended agar 0.1 and with 0.5% observing any (11). Gelatin liquefaction was determined by spot inoculation of nutrient agar amended with 0.4% gelatin. Plates were incubated anaerobically for 3 days at 28 C and flooded with 5 ml of acid mercuric chloride solution (11). Pure cultures of clostridia were stored in SDW in screw cap tubes (13x100 mm) at room temperature. Pectolytic activity of ClAl and ClBl was estimated by measuring the diameter of pits formed on double-layer pectate medium (DLPM) (15) at 16, 20, 23, 28, and 37 C. Maceration activity of ClAl and ClBl isolates was compared by weighing the nonmacerated tissue of cylinders of Beauregard, Porto Rico, and Jewel sweetpotatoes, potato, and carrot 48 hr after inoculation. Inoculation methods. Storage disinfested with 1% NaOCl borer, cylinders of raw aseptically (Fig. 2), for 10 min. storage and roots were peeled Using a flamed cork root tissue were transferred and to screw obtained cap tubes (13x100 mm) containing à sterile solution of 0.05 % cysteine hydrochloride. Tubes were inoculated with cells from 24-hr-old colonies and incubated for 72 hr at 32 C. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 119 Whole storage roots disinfested as described of Beauregard above, sweetpotato were dipped in a suspension of pectolytic Clostridium, punctured with a flamed needle, and kept in distilled water in plastic bags at 25 C for 5 days. Control storage roots received the same treatment but were not dipped in the bacterial suspension. Sterile toothpicks were colonies grown touched on NGA and inserted to typical 24-hr-old into disinfested whole storage roots to a depth of about 2.5 cm. The toothpicks were left in position and storage roots were wrapped in a wet paper towel and plastic wrap and incubated at 25 C for 5 days inside clear plastic bags (Fig. 3). The same procedure was used to inoculate potato tubers, carrot roots, and onion bulbs. Storage roots also were sliced in half longitudinally and inoculated by streaking cells of 24-hr-old colonies grown on NGA onto the center of one of the slices. Afterwards, the two slices were joined together, wrapped with wet paper towel and clear plastic, and incubated at 25 C for 5 days. Interaction. The reaction of whole storage roots to inoculation with cell suspensions of E. chrvsanthemi and/or pectolytic clostridium (ClBl) was recorded. Micropipette tips containing 50 ^1 of inoculum were inserted into Jewel storage roots and roots were left in position. placed Following inoculation, in plastic vegetable baskets storage that were stacked and covered with a black polyethylene bag (6 ) . Number of decayed roots was recorded 4 and 10 days after inoculation Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 120 in the first and second trials, respectively. trial, extension and color of rotted In the second tissues were recorded. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. also 121 RESULTS Effect Of surface disinfestation. When maintained under water for 5 days, 5 and 10% of nondisinfested, uninjured storage roots rotted in tests 1 and 2, respectively. injured, 85 and 100% of storage roots rotted. All When injured storage roots inoculated with E. chrvsanthemi rotted in both trials while 90 and 30% of inoculated roots rotted even when uninjured in the first and second tests, respectively. Uninjured, disinfested storage roots did not rot when kept under water for 5 days. When surface disinfested storage roots were wounded, 15% and none rotted in tests 1 and 2, respectively (Fig. 4). Isolation. Pectolytic, spore-forming, sulfate-reduction negative, gelatin forming white hydrolysis positive, anaerobic colonies on NGA and PIA media (Fig. bacteria 5) and resembling Clostridium spp. in cell morphology (Fig. 6 ) were isolated from all samples of souring-affected tissues. Two isolates, ClAl and ClBl, were chosen and used throughout this investigation. ClAl formed small, round isolated colonies on PIA medium while ClBl formed large, thin spreading colonies. Both ClAl and ClBl formed nonspreading colonies on NGA. Souring symptoms developed in 7, 4, 6 , and 9 out of 10 storage roots of Beauregard and Centennial from Chase, LA, and Jewel and Porto respectively, Rico when sweetpotatoes injured and from Baton maintained Rouge, LA, underwater. Pectolytic bacteria with the same characteristics described Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 122 above were isolated from all souring tissues but no E. chrvsanthemi was detected. When cylinders of aseptically sampled, raw storage root tissue were inoculated with (2.1-2.5x4.9x5 .6 f m ) ClAl, swollen bacterial cells with terminal oval spores (2.0 /xm) were consistently observed by microscopic examination (Fig. 6 ). Swollen cells were not found on solid media, only rod-shaped cells. Swollen cells also were found in tissue from the edge of decay in inoculated storage roots. In some cases, despite disinfestation with NaOCl, rots developed in storage roots and a great number of swollen bacterial cells also were detected in the tissues along with rod-shaped cells. Inoculations. ClAl induced rotting in tissue cylinders kept in SDW in tightly capped tubes (Fig. 7), in punctured storage roots submerged in distilled water in closed plastic bags, and in inoculated storage roots wrapped with wet paper towel and plastic wrap. Pectolytic Activity. On DLPM, pectolytic activity was greater at 28 (pit diameter = 2 . 9 mm) and 37 C (3.9 mm) than at 20 (0.8 mm) or 24 C (1.3 mm). Colonies were visible at 16 C but no craters were formed. Isolate ClBl showed greater maceration activity on Beauregard sweetpotato, potato, and carrot than ClAl (Fig. 8 ). Host Range. Sweetpotato isolates ClAl and ClBl macerated sweetpotato (Fig. 9), potato (Fig. 10), carrot (Fig. 11), and onion (Fig. 12) when inoculated using toothpicks. Symptoms Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 123 were distinct from the sticky rot symptom reported on potato previously (3), as no slimy mass was formed at any time. Interaction. storage roots inoculated chrvsanthemi and pectolytic clostridium aerobic conditions, 13). E. combined, in showed significantly greater number of decayed roots than with E. (Fig. (ClBl) with chrvsanthemi or ClBl separately This difference was not detected in the second trial (Fig. 13), however, the lesion dimension (33 mm) induced by the combined inoculation was 30% larger than by E. chrvsanthemi alone (23 m m ) . In addition, the dark zone which commonly develops at the border of the lesion, that is associated with the restriction of lesion development in some genotypes (7), was not formed when both bacteria were COinoculated. Inoculation of ClBl alone produced no or very small lesions (1-2 mm) in both trials. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 124 DISCUSSION This study provides the first evidence to support the hypothesis that pectolytic anaerobes are associated with the disorder of sweetpotato known as souring. association of pectolytic clostridia Evidence for the with souring of sweetpotato storage roots includes; surface disinfestation of storage roots eliminated or reduced consistently the incidence of souring; chrvsanthemi Koch's postulates were partly was isolated not from fulfilled; controls; and E. similar pectolytic clostridia were isolated from storage roots of two cultivars from different locations. In addition, only pectolytic Clostridia were isolated consistently from souring tissues. The first requirement of Koch's postulate was met only partially isolate because there pectolytic naturally was no opportunity to clostridia from storage occurring souring in the field. attempt roots to with However, the isolation of similar bacteria from souring tissues of storage roots of different cultivars from different locations indicated that these bacteria are associated with sweetpotato storage roots. Whether or not pectolytic clostridia are the primary or sole cause of souring of sweetpotato, it seems clear that they are responsible for some of the characteristic features of the disorder. The hypothesis that E. chrvsanthemi is involved in souring of sweetpotato was not supported. When artificially Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 125 inoculated in disinfested storage roots, E. chrvsanthemi was recovered from the margins of the lesion and no other pectolytic bacteria were found. However, when non-disinfested storage roots were stabbed with a flamed needle, and kept under water in a plastic bag, no Erwinia sp. were detected but pectolytic clostridia were consistently recovered. These results are similar to those found with Irish potato where pectolytic clostridia are capable of initiating soft rots in tubers incubated anaerobically in the absence of detectable soft-rot Erwinia (20). Symptoms caused by E. chrvsanthemi are different from those caused by clostridia. Maceration and gas production seem to be greater with clostridia. Comparisons of kinds of pectolytic enzymes, speed of maceration, and particularly composition of gases emanating from macerated tissues should be conducted with E. chrvsanthemi and pectolytic clostridia. Combined inoculation of E. chrvsanthemi and pectolytic Clostridium (ClBl) under aerobic conditions resulted in increased numbers of rotted storage roots and larger lesions. Thus, the possibility of an interaction between E. chrvsanthemi and clostridia deserves further investigation. In order for Clostridium spp. to play a primary role in attacking plant tissue, they probably require the ability to degrade pectic fulfilled this substances (17). requirement by The showing sweetpotato isolates a strong pectolytic activity and macerating not only sweetpotato but also carrot. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 126 potato, and onion. Although pectolytic enzyme production may be important in pathogenesis, it also has potential use by the sweetpotato industry. Chopped carrots, potatoes, celery, and many fruits are readily reduced to loose aggregates of cells by pectolytic enzymes and used for the manufacture of their concentrates develop (5). Likewise, interest pectolytic in enzymes the utilizing in a sweetpotato these process industry bacteria that or requires may their tissue maceration. The sweetpotato producing areas of Louisiana receive an average annual rainfall of 130 to 145 cm. Evenly distributed throughout the year, this rainfall would provide adequate moisture for most crops grown in the state but distribution is often very erratic (12). In 1990, for instance, the rainfall was zero in August and 890 mm in September, a harvest month, at anaerobiosis areas. Burden Plantation, is unlikely to be Baton Rouge. restricted only to However, flooded Certain locations or even microsites in soil in the field can develop anaerobiosis (9). No attempts were made in this study to characterize the species of pectolytic bacteria isolated from sweetpotatoes. However, further evidence regarding the importance of pectolytic clostridia might be gained by characterization of strains and assessment of their occurrence field and storage. in rots in the Investigations have been carried out on effects of wet soil on fleshy roots (13, 27) , changes in the Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 127 internal gas concentrations (l), tolerance of cultivars to flooding damage (27), but microbiology has been ignored. •Souring' previously has been regarded as a physiological disorder. The involvement of clostridia does not discount the importance of the host and/or environment but adds another biotic component which may help to further understand flooding damage or related stresses in storage roots. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 128 Fig. 5.1. Souring symptoms. Sweetpotato storage root cut open to show internal maceration that is characteristic of souring. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 129 Fig. 5.2. Preparation of cylinders of raw storage root tissue. The storage root was peeled and disinfested with 1% NaOCl for 10 min. Using a flamed cork borer, cylinders of raw storage root tissue were obtained aseptically. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 130 Fig. 5.3. Anaerobiosis using wet paper towel and plastic wrap. Potato tubers inoculated Clostridium using with an isolate infested toothpicks. of pectolytic Tubers were wrapped with wet paper towel and plastic wrap, and incubated inside a plastic bag. Gas formation, indicated by bubbles around toothpicks, is a characteristic of souring. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 131 □ Non-Punctured s Punctured W 15 40 CO Control Ech NaOCl Treatment □ Non-Punctured Q Punctured W 15 Test 2 P ) 10 0) P) 40 (0 « Control Ech NaOCl Treatment Fig. 5.4. Effect of disinfestation of storage roots on incidence of souring. Number and percentage of rotted sweetpotato storage roots with no treatment (control), inoculated with Erwinia chrvsanthemi (Ech ) , or disinfested with NaOCl, and punctured or not with a flamed needle. Roots were incubated individually for 5 days at 25 C submerged in distilled water in plastic bags. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 132 Fig. 5.5. Clostridia, Colonies isolates of pectolytic ClBl (left) clostridia. and ClAl Pectolytic (right), on PIA medium after 48-hr anaerobic incubation at 32 C. ciBl forms spreading colonies while C1B2 forms white colonies on this medium. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 133 Fig. 5.6. Cell morphology of pectolytic bacteria. bacterial cells spores were (2.1-2.5 X 4.9-5 .6 f m ) found when either Swollen with terminal oval cylinders of aseptically sampled, raw storage root tissue or whole storage roots were inoculated with pure cultures of pectolytic clostridia. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 134 Fig. 5.7. Maceration of raw tissue cylinders. Completely macerated cylinders of raw storage root tissue three days after inoculation with pectolytic clostridia (3 tubes left). Noninoculated tube is on the right. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. on 135 Maceration activity on different hosts 2 5 -,--------------------LSD = 0.09 P = 0.0001 C.V. = 18% FF= 0.97 20.5 Control - Beauregard Jewel Porto Rico Carrot Potato Host Fig. 5.8. Maceration activity on different hosts. Maceration activity of two Clostridium isolates (ClAl and ClBl) tissue of cylinders cultivars, potato of storage tubers, and roots carrot three roots, on raw sweetpotato estimated weighing the nonmacerated tissue 48 hr after inoculation. Reproduced with permission of the copyright owner Further reproduction prohibited without permission. by 136 Clostr-iHi„j^ (C12A) Fig. 5.9. Pathogenicity on sweetpotato. Sweetpotato storage roots inoculated with toothpicks infested with an isolate of pectolytic Clostridium (left) and noninoculated (right). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 137 Fig. 5.10. inoculated Pathogenicity on with toothpicks potato infested tubers. Potato with an tubers isolate pectolytic Clostridium (left) and noninoculated (right). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. of 138 Fig. with 5.11. Pathogenicity on carrot. toothpicks infested with an Carrot root inoculated isolate of pectolytic Clostridium. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 139 Fig. 5.12. Pathogenicity on onion. Onion bulb inoculated with toothpicks infested with an isolate of pectolytic Clostridium. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 140 □ Ech-2 + CIB1 D) 60 March Time Fig. 5.13. Combined inoculation with Erwinia chrvsanthemi and pectolytic Clostridium. Percent storage roots of Beauregard sweetpotato that rotted following inoculation with Erwinia chrvsanthemi (Ech-2), Clostridium sp. (ClBl), or combination (Ech-2+ClBl). Roots were incubated under aerobic conditions for 4 days in March and 10 days in April at ± 25 C. Bars with the same letter are not significantly different (Duncan's multiple range, P = 0.0001). Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 141 LITERATURE CITED 1. Ahn, J. K . , Collins, W. W . , and Pharr, D. M. 1980. Gas atmosphere in submerged sweet potato roots. HortScience. 15:795-796. 2. Becton Dickison Microbiology Systems. 4361216. Cockeyville, Maryland, 21030, USA. 3. Campos, E . , Maher, E. A., and Kelman, A. 1982. Relationship of pectolytic clostridia and Erwinia carotovora strains to decay of potato tubers in storage. Plant Dis. 66:543-546. 4. Cato, E. P., George, W. L . , and Finegold, S. M. 1986, Genus Clostridium Prazmowski 1980. Pages 1141-1199 in: Sergey's Manual of Systematic Bacteriology, Vol. II. 5. Chesson, A. 1980. Maceration in relation to the post harvest handling and processing of plant material. J. Appl. Bacteriol. 48:1-45. 6. Clark, C. A., and Moyer, J. W. 1988. Compendium of Sweet Potato Diseases. APS Press, St. Paul,MN. 74 pp. 7. Clark, C. A., Wilder-Ayers, J. A., and Duarte, V.1989. Resistance of sweet potato to bacterial root and stem rot caused by Erwinia chrvsanthemi. Plant Dis. 73:984987. 8. Corey, K. A., Collins, W. W . , and Pharr, D. M. 1982. Effect of duration of soil saturation on ethanol concentration and storage loss of sweet potato roots. J. Amer. Soc. Hort. Sci. 107:195-198. 9. Drew, M. C . , and Lynch, J. M. 1980. Soil anaerobiosis, microorganisms, and root function. Annu. Rev. Phytopathol. 18:37-66. 10. Duarte, V., and Clark, C. A. 1990. Pectolytic Clostridia associated with souring of sweetpotato. (Abstr.) Phytopathology 80:1002. 11. Gerhardt, P. 1984. Manual of methods for general bacteriology. American Society for Microbiology, Washington, DC. 524 pp. Cat. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. No. 142 12. Hammet, H. L . , Constantin, R. J . , Jones, L. G., Hernandez, T. P. 1982. The effect of phosphorus and soil moisture levels on yield and processing quality of 'Centennial' sweet potatoes. J. Amer. Soc. Hort. Sci. 107:119-122. 13. Kushman, L. J . , and Deonier, M. T. 1954. Effects of weather, date of harvest, and curing treatments on keeping qualities of Porto Rico sweet potatoes. Proc. Amer. Soc. Hort. Sci. 71:369-375. 14. Liao, C. H . , and Wells, J. M. 1987. Association of pectolytic strains of Xanthomonas camoestris with soft rots of fruits and vegetables at retail markets. Phytopathology 77:418-422. 15. Lund, B. M. 1969. Properties of some pectolytic, yellow pigmented. Gram negative bacteria isolated from fresh cauliflowers. J. Appl. Bacteriol. 32:60-67. 16. Lund, B. M. 1972. Isolation of pectolytic clostridia from potatoes. J. Appl. Bacteriol. 35:609-614. 17. Lund, B. M. 1982. Clostridia and plant disease: New pathogens? Pages 263-283 in: Phytopathogenic Prokaryotes, Vol 1, Mount, M. S., and Lacy, G. S., eds. Academic Press, NY. 18. Lund, B. M . , Brocklehurst, T. F . , and Wyatt, G. M. 1981. Characterization of strains of Clostridium puniceum sp. nov., a pink-pigmented, pectolytic bacterium. J. Gen. Microbiol. 122:17-26. 19. Lund, B. M . , and Nicholls, J. influencing the soft-rotting of bacteria. Potato Res. 13:210-214. 20. Pérombelon, M. C. M . , Gullings-Handley, J., and Kelman, A. 1979. Population dynamics of Erwinia carotovora and pectolytic Clostridium spp. in relation to decay of potatoes. Phytopathology 69:167-173. 21. Pérombelon, M. C. M . , and Kelman, A. 1980. Ecology of the soft-rot erwinias. Annu. Rev. Phytopathol. 18:361387. 22. Phills, B. R. 1972. Effect of ethephon, temperatures, water-submerged roots and cultivars on sweetpotato plant production. MS Thesis. La. State Univ., Baton R ouge. C. 1970. Factors potato tubers by Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. 143 23. Rudd-Jones, D . , and Dowson, W. J. 1950. On the bacteria responsible by Bacterium carotovorum (Jones) Lechmann & Newmann. Ann. Appl. Biol. 37:563-569. 24. Schink, B., Ward, J. C., and Zeikus, J. G. 1981. Microbiology of wetwood: Importance of pectin degradation and Clostridium species in living trees. Appl. Environ. Microbiol. 42:526-532. 25. Schink, B., Ward, J. C., and Zeikus, J. G. 1981. Microbiology of wetwood: Role of anaerobic bacterial populations in living trees. J. Gen. Microbiol. 123:313-322. 26. Suyama, K . , Negishi, H . , Tjahjono, B . , and Fujii, H. 1988. Investigation on occurrence of pectolytic Clostridia on various crops in Japan. (Abstr.) Int. Congr. of Plant Path. 11:1-2. 27. Ton, C. s., and Hernandez, T. P. 78. Wet soil stress effects on sweet potatoes. J. Amer. Soc. Hort. Sci. 103:600-603. 28. Ward, J. C . , Kuntz, J. E . , and McCoy, E. M. 1969. Bacteria associated with "shake" in broadleaf trees. (Abstr.) Phytopathology 59:1056. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. VITA Valmir Duarte was borne in Porto Alegre, RS, Brazil on October 12, 1953, and raised in Canoas, Brazil. He earned his B.S. and M.Sc. degrees at the Agronomy College, University of Rio Grande do Sul, Porto Alegre, Federal in 1977 and 1981, respectively. In March began working 1980, as before finishing the M.Sc. instructor of microbiology course, and he plant pathology courses at the 'Pontiflcia Universidade Catolica', Uruguaiana, RS, until December 1980, when he was hired by the Agronomy College of the Federal University of RS. Since then, he has been teaching microbiology and plant pathology in the Agronomy College. He was also instructor of a plant pathology course in the Agronomy College of the Federal University of Santa Catarina, Florianopolis, SC, during one semester in 1982. In December 1983, he was elected chairman of Fitotecny Department, holding the position for two years. Currently, he is maintaning the rank of associate professor in Brazil and receiving a Brazilian scholarship from the Council of National Scientific and Technological Development (CNPq). Valmir Duarte has been pursuing a Ph.D. degree in the Department of Plant Pathology and Crop Physiology, LSU, with a minor in microbiology, since the summer, 1987. He has been working under the direction of Dr. C. A. Clark. 144 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. D O C TO R AL E X A M IN A T IO N AND DISSERTATION REPORT Candidate; V alm ir Duarte Major Field; P la n t H e a lth Title of Dissertation; Ecology o f E rw in ia chrysanthem i, causal agent o f b a c t e r ia l stem and ro o t r o t on sweetpotato and e tio lo g y o f souring Approved; MMajor ajor Profess Professor and Chairman Dean of the Graduate School EXAMINING COMMITTEE. Û/mW 0 ' ^ ' ^ ---------------- Date of Examination: November 16, 1990 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission.
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