Plant Physiology Preview. Published on May 12, 2017, as DOI:10.1104/pp.17.00481 1 N-terminal thioredoxin reductase domains and thioredoxins Act 2 Concertedly in Seedling Development 3 Valle Ojeda1, Juan Manuel Pérez-Ruiz1*, Maricruz González1, Victoria A. Nájera1, 4 Mariam Sahrawy2, Antonio J. Serrato2, Peter Geigenberger3 and Francisco Javier 5 Cejudo1* 6 7 1 Instituto de Bioquímica Vegetal y Fotosíntesis, Universidad de Sevilla and Consejo 2 8 Superior de Investigaciones Científicas, 41092-Sevilla, Spain; 9 Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, Superior de Investigaciones Científicas, Granada, Department of Spain; 3 10 Consejo Ludwig- 11 Maximilians-Universität München, Department Biologie I, 82152 Martinsried, 12 Germany 13 14 *Corresponding authors: 15 Francisco Javier Cejudo ([email protected]) 16 Juan Manuel Pérez-Ruiz ([email protected]) 17 18 Short title: The concerted action of f- and x-type Trxs and NTRC 19 20 One Sentence Summary 21 Nitrogen regulatory Protein C plays a pivotal role required for the function of 22 Theoredoxins x and f and is essential for early seedling development. 23 24 Author contributions 25 J.M.P-R. and F.J.C. designed the study. V.O. performed most of the experiments; M.G. 26 and V.A.N. performed microscopy analyses; M.S. and A.J.S. performed FBPase in vitro 27 studies. J.M.P-R., P.G. and F.J.C. analyzed data. F.J.C. wrote the paper. J.M.P-R. and 28 P.G. revised the manuscript. All authors read and approved final manuscript. 29 30 31 32 33 Financial support 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Copyright 2017 by the American Society of Plant Biologists 34 This work was supported by European Regional Development Fund-cofinanced grant 35 (BIO2013-43556-P) from the Spanish Ministry of Innovation and Competiveness 36 (MINECO) and Grant CVI-5919 from Junta de Andalucía, Spain. V.O. was recipient of 37 a pre-doctoral fellowship from MINECO. P.G. gratefully acknowledges support from 38 the Deutsche Forschungsgemeinschaft (SFB-TR175 B02). 39 40 Keywords: Chloroplast, NTRC, Thioredoxin f, Thiredoxin x, Redox regulation, 41 Seedling 42 43 Journal research area: Biochemistry and Metabolism 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 ABSTRACT 2 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 68 69 Thiol-dependent redox regulation of enzyme activity plays a central role in the rapid 70 acclimation of chloroplast metabolism to ever fluctuating light availability. This 71 regulatory mechanism relies on ferredoxin (Fdx) reduced by the photosynthetic electron 72 transport chain, which fuels reducing power to thioredoxins (Trxs) via a Fdx-dependent 73 Trx reductase (FTR). In addition, chloroplasts harbour an NADPH-dependent Trx 74 reductase, which has a joint Trx domain at the C-terminus, termed NTRC. Thus, a 75 relevant issue concerning chloroplast function is to establish the relationship between 76 these two redox systems and its impact on plant development. To address this issue we 77 generated Arabidopsis thaliana mutants combining the deficiency of NTRC with those 78 of Trxs f, which participate in metabolic redox regulation, and Trx x, which has 79 antioxidant function. The ntrc-trxf1f2 and, to a lower extent, the ntrc-trxx mutants 80 showed severe growth retarded phenotypes, decreased photosynthesis performance and 81 almost abolished light-dependent reduction of fructose-1,6-bisphosphatase. Moreover, 82 the combined deficiency of both redox systems provokes aberrant chloroplast 83 ultrastructure. Remarkably, both the ntrc-trxf1f2 and the ntrc-trxx mutants showed high 84 mortality at the seedling stage, which was overcome by addition of an exogenous 85 carbon source. Based on these results, we propose that NTRC plays a pivotal role in 86 chloroplast redox regulation, being necessary for the activity of diverse Trxs with 87 unrelated functions. The interaction between the two thiol-redox systems is 88 indispensable to sustain photosynthesis performed by cotyledons chloroplasts, which is 89 essential for early plant development. 90 91 92 93 94 95 96 97 98 99 100 101 INTRODUCTION 3 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 102 103 Photosynthesis is a central feature of chloroplasts allowing the use of light and water for 104 the production of organic material, thus being the primary source of biomass and 105 oxygen in the biosphere. Beside their essential function as factories of metabolic 106 precursors, chloroplasts play also a relevant role harmonizing the growth of the different 107 organs of the plant as well as its acclimation to changing environmental conditions. 108 Therefore, chloroplast biogenesis and function are deeply integrated with plant growth 109 and development (Inaba and Ito-Inaba, 2010; Jarvis and Lopez-Juez, 2013). A classic 110 example of this integration occurs at the seedling stage, when true leaves are generated 111 (Waters and Langdale, 2009; Pogson et al., 2015). To fulfil these functions, chloroplast 112 metabolism needs to rapidly adjust to unpredictable changes of light availability. In this 113 regard, thiol-dependent redox regulation of enzyme activity plays a relevant role 114 (Couturier et al., 2013; Balsera et al., 2014), the disulphide reductase activity of 115 thioredoxins (Trxs) being central for this regulatory mechanism (Meyer et al., 2012; 116 Serrato et al., 2013). 117 Trx-dependent redox regulation is universally found in any kind of organisms 118 from bacteria and yeasts to plants and animals. In heterotrophic organisms and non- 119 photosynthetic compartments of plant cells, the reducing power for Trx reduction is 120 provided by NADPH in a reaction catalysed by an NADPH-dependent Trx reductase 121 (NTR) (Jacquot et al., 2009). In contrast, redox regulation in plant chloroplasts has 122 remarkable specific features. First, these organelles harbour a rather complex set of Trxs 123 (Meyer et al., 2012; Balsera et al., 2014), while in heterotrophic organisms Trx and 124 NTR are encoded by small gene families. Moreover, the source of reducing power for 125 Trx reduction in chloroplasts is not NADPH, as in heterotrophic organisms, but reduced 126 ferredoxin (Fdx), hence chloroplasts are equipped with a Fdx-dependent Trx reductase 127 (FTR) (Schurmann and Buchanan, 2008), which is specific of these organelles. Based 128 on the function of the FTR/Trx redox system, the classic view of redox regulation of 129 chloroplast metabolism states that metabolic pathways such as carbon assimilation by 130 the Calvin-Benson cycle are active during the day due to the reductive activation of 131 enzymes of the cycle, which relies on Fdx reduced by the photosynthetic electron 132 transport chain, thus linking metabolic regulation to light (Michelet et al., 2013; Serrato 133 et al., 2013). 134 The view of chloroplast redox regulation based on the action of the Fdx- 135 dependent FTR/Trx system was modified after the discovery of a novel type of NTR 4 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 136 with a joint Trx domain at the C-terminus, which was termed NTRC (Serrato et al., 137 2004). NTRC is exclusive of organisms that perform oxygenic photosynthesis and 138 shows plastid localization in plants (Kirchsteiger et al., 2012). Moreover, biochemical 139 analyses revealed that NTRC is able to conjugate both NTR and Trx activities to 140 efficiently reduce the H2O2 scavenging enzyme 2-Cys peroxiredoxin (2-Cys Prx) (Moon 141 et al., 2006; Perez-Ruiz et al., 2006; Alkhalfioui et al., 2007). Arabidopsis NTRC 142 knockout mutants show a characteristic phenotype of retarded growth and pale green 143 leaves, this phenotype being more severe under short-day conditions (Perez-Ruiz et al., 144 2006; Lepisto et al., 2009). Based on these results it was initially proposed that NTRC 145 constitutes an NADPH-dependent redox system which might have a complementary 146 function to the Fdx-dependent FTR/Trx system. Further evidence showed the 147 participation of NTRC in redox regulation of enzymes which were previously known to 148 be Trx-regulated. This is the case of ADP-glucose pyrophosphorylase (AGPase), a key 149 enzyme of starch biosynthesis (Michalska et al., 2009; Lepisto et al., 2013), and of 150 enzymes of the chlorophyll biosynthesis pathway (Richter et al., 2013; Perez-Ruiz et al., 151 2014). These results suggest that chloroplast redox regulation depends on the cross-talk 152 of both Fdx/FTR/Trx and NTRC redox systems, hence being more complex than 153 previously anticipated. 154 It was recently reported that a double mutant of Arabidopsis devoid of NTRC 155 and Trx f1, which is the most abundant f-type Trx, shows a very severe growth 156 inhibition phenotype and an almost complete abolishment of light activation of fructose- 157 1,6-bisphosphatase (FBPase), a redox-regulated enzyme of the Calvin-Benson cycle 158 (Thormahlen et al., 2015). Furthermore, the Arabidopsis double mutant deficient in 159 NTRC and FTR displays a lethal phenotype under autotrophic growth conditions 160 (Yoshida and Hisabori, 2016) suggesting that NTRC and the Fdx/FTR/Trx systems act 161 concertedly in redox regulation of common targets in planta. Bifluorescence 162 complementation (BiFC) assays showing that NTRC interacts in vivo with well- 163 established Trx-regulated enzymes (Nikkanen et al., 2016) further supports this notion. 164 The question arising is whether the effect of NTRC is exerted only on Trxs such as 165 those of the f type, which participate in redox regulation of metabolic pathways, or 166 affects the activity of other types of Trxs. To address this issue, we have analysed the 167 genetic interaction of NTRC with two functionally unrelated chloroplast Trxs: f-type, as 168 representative of Trxs involved in redox regulation of metabolic pathways (Michelet et 169 al., 2013), and x-type, as representative of Trxs involved in antioxidant defence (Collin 5 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 170 et al., 2003). The Arabidopsis ntrc-trxx double mutant and the ntrc-trxf1f2 triple mutant 171 were generated. While the Trx-deficient parental lines, trxf1f2 and trxx, showed a 172 visible phenotype similar to the wild type plants when grown under long day conditions, 173 these deficiencies caused a severe growth inhibition phenotype when combined with the 174 lack of NTRC. Moreover, the ntrc-trxx mutant and, to a higher extent, the ntrc-trxf1f2 175 mutant showed a massive mortality at the seedling stage. These results reveal that 176 NTRC is essential for the activity of unrelated Trxs, thus playing a pivotal role in 177 chloroplast redox regulation, which is critical during early stages of plant development. 178 179 RESULTS 180 181 The combined deficiencies of NTRC and f- or x-type Trxs cause severe growth 182 inhibition phenotype and the impairment of light-dependent regulation of FBPase 183 184 In our attempt to establish the function of NTRC in chloroplast redox regulation we 185 have studied the genetic interaction of NTRC with functionally divergent chloroplast 186 Trxs, such as Trxs f and Trx x. Previous results suggesting the concerted action of 187 NTRC and Trx f1 were based on the severe growth retard phenotype of the Arabidopsis 188 ntrc-trxf1 double mutant (Thormahlen et al., 2015). However, this mutant still contains 189 Trx f2 which constitutes approx. 10% of the total content of f-type Trxs in wild type 190 plants (Thormahlen et al., 2013). To avoid any effect of the residual Trx f2 in its 191 relationship with NTRC, we generated the triple mutant ntrc-trxf1f2 devoid of NTRC 192 and Trxs f. In addition, the ntrc mutant was crossed with the trxx single mutant (Pulido 193 et al., 2010) and the ntrc-trxx double mutant was obtained. These lines were effectively 194 knockout mutants as shown by the lack of transcripts of the corresponding genes in each 195 of the mutants as determined by RT-qPCR analyses (Fig. 1A). As previously reported, 196 the Trx-deficient lines trxf1f2 (Naranjo et al., 2016a) and trxx (Pulido et al., 2010) 197 showed a visible phenotype very similar to the wild type plants when grown under long- 198 day photoperiod (Fig. 1B, C), while the ntrc mutant showed growth retard and pale 199 green phenotype (Fig. 1B, C), in agreement with previous results (Serrato et al., 2004; 200 Lepisto et al., 2009). In contrast, the ntrc-trxx mutant, combining the deficiencies of 201 NTRC and Trx x, showed a very severe growth retarded phenotype, which was even 202 more severe in the case of the ntrc-trxf1f2 triple mutant (Fig. 1B). In line with their 203 phenotypes, the ntrc-trxf1f2 and ntrc-trxx mutants showed significantly lower content of 6 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 204 chlorophyll than their respective parent lines (Fig. 1C). It should be noted that despite 205 their severe growth inhibition both the ntrc-trxx and the ntrc-trxf1f2 mutants were able 206 to produce flowers and viable seeds, when grown under long-day photoperiod. 207 Therefore, while the lack of Trxs f or Trx x have little effect on plant phenotype, when 208 these deficiencies are combined with that of NTRC the effects become very severe. 209 To establish the impact of the combined deficiencies of NTRC and Trxs f and x 210 on redox regulation of chloroplast metabolic pathways, we analysed FBPase, a well- 211 established redox regulated enzyme of the Calvin-Benson cycle. First, activity assays 212 showed slightly lower FBPase activity in leaves of the ntrc, trxx and trxf1f2 mutants 213 than in the wild type, while the ntrc-trxx mutant showed lower activity, which was even 214 lower in the ntrc-trxf1f2 mutant (Fig. 2A). It should be taken into account that 215 Arabidopsis contains three isoforms of FBPase, one localized in the cytosol (Cséke and 216 Buchanan, 1980) and two in the chloroplast (Serrato et al., 2009), hence the FBPase 217 activity here determined reflects the contribution of these isoforms. However, only one 218 of the chloroplast-localized FBPase isoforms is redox regulated and Arabidopsis 219 mutants lacking this isoform have a more severe dwarf phenotype than mutants lacking 220 the cytosolic isoform (Rojas-González et al., 2015). Thus, to get more insight into the 221 function of NTRC, Trxs f and Trx x in chloroplast redox regulation we analysed the 222 light-dependent changes of the redox state of the plastid-localized FBPase isoform, 223 which is known to be regulated by Trxs f, not by Trx x (Michelet et al., 2013). As 224 previously reported (Thormählen et al., 2015; Naranjo et al., 2016a), thiol derivatization 225 with the alkylating agent MM(PEG)24 showed that FBPase was fully oxidized in leaves 226 from dark-adapted wild type plants and became reduced upon illumination, the level of 227 reduction being dependent of light intensity (Fig. 2B, C). Light-dependent FBPase 228 reduction was partially impaired in the trxf1f2 mutant and, surprisingly, also in the trxx 229 mutant (Fig. 2B, C). Interestingly, the degree of FBPase photo-reduction was even 230 lower in the ntrc mutant and almost abolished in mutants combining the deficiency of 231 NTRC with those of Trx x or Trxs f (Fig. 2B, C), in agreement with previous studies 232 with ntrc-trxf1 double mutants (Thormählen et al. 2015). Illumination with higher light 233 intensity resulted in a higher level of enzyme reduction though the pattern of FBPase 234 reduction of the different lines was similar to that obtained under growth light (Fig. 2B, 235 C). 236 These results are surprising since biochemical analyses have shown that FBPase 237 is regulated by Trxs f but not by NTRC (Yoshida and Hisabori, 2016) or Trx x (Collin et 7 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 238 al., 2003). Thus, to analyse further the role of these thiol redox systems in the regulation 239 of FBPase, we performed in vitro assays with the purified enzymes. While almost full 240 reduction of FBPase was accomplished with 0.5 μM concentration of either Trx f1 or 241 Trx f2, the concentration of Trx x to obtain a similar level of FBPase reduction was at 242 least ten-fold higher (Fig. 3), which is in contrast with the similar level of impairment of 243 light-dependent FBPase reduction in the trxx and trxf1f2 mutants (Fig. 2B, C). 244 Moreover, NTRC did not show any capacity to reduce FBPase in vitro (Fig. 3) despite 245 the fact that the degree of light-dependent FBPase reduction was greatly decreased in 246 the ntrc mutant (Fig. 2B, C). The severe impairment of light-dependent reduction of 247 FBPase in the ntrc-trxx and ntrc-trxf1f2 mutants demonstrates the concerted action of 248 both NTRC and f- or x-type Trxs on FBPase redox regulation, though these results 249 suggest that NTRC affects FBPase redox regulation by an indirect mechanism. 250 251 The combined deficiencies of NTRC and f- or x-type Trxs affect photosynthetic 252 performance and chloroplast structure 253 254 The effects of the combined deficiencies of NTRC and Trxs f or Trx x on plant 255 growth (Fig. 1) and the activity (Fig. 2A) and redox regulation (Fig. 2B, C) of FBPase 256 suggest that the impairment of these redox regulatory systems affects photosynthesis 257 performance. Previous reports have shown that the deficiency of NTRC, but not of Trxs 258 f or Trx x, provokes enhanced non-photochemical quenching (NPQ) at low light 259 intensity (Naranjo et al., 2016a, b), hence causing a poor efficiency in the utilization of 260 light energy by the ntrc mutant. Thus, as a first step to determine the effect of the 261 combined deficiencies of NTRC and Trxs f or x on photosynthetic performance, we 262 analysed NPQ in the different lines under study. In agreement with previous results, the 263 ntrc mutant showed enhanced NPQ at light intensity as low as 42 μmol quanta m-2 s-1, 264 while NPQ was only slightly enhanced in the trxx and trxf1f2 mutants (Fig. 4A). Similar 265 to the ntrc mutant, ntrc-trxx and ntrc-trxf1f2 plants showed extended NPQ values during 266 the whole illumination period, however, NPQ did not completely decay in the period of 267 darkness as it did in ntrc plants (Fig. 4A), showing that light utilization in ntrc-trxx and 268 ntrc-trxf1f2 mutants was even less efficient than in the ntrc mutant. In line with these 269 results, the photosynthetic electron transport rate (ETR) was also impaired. The 270 deficiency of NTRC affected the photosynthetic ETR more severely than the deficiency 271 of Trxs x and f (Fig. 4B). Notably, both the ntrc-trxx and ntrc-trxf1f2 mutants showed 8 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 272 dramatically reduced photosynthetic ETR at any of the light intensities analysed (Fig. 273 4B). Moreover, the stability of photosystem II (PS II), determined as the Fv/Fm ratio, 274 which was slightly affected in the ntrc and the trxx mutant, was also severely affected in 275 the mutants combining the deficiencies of NTRC with those of x or f type Trxs (Table 276 I). Finally, the net rate of CO2 fixation (AN) at growth light intensity (125 μE m-2 s-1), 277 which was lower in the ntrc mutant but unaffected in the trxx and trxf1f2 mutants, as 278 compared with the wild type, showed negative values in the ntrc-trxx and ntrc-trxf1f2 279 mutants (Fig. 4C), hence indicating that the rates of respiration and photorespiration 280 were higher than the rate of CO2 fixation in these plants. Moreover, the severe 281 impairment of photosynthetic performance in mutants simultaneously devoid of NTRC 282 and f- or x-type Trxs has a wider effect on chloroplast metabolism as shown by the 283 content of starch, which was also severely decreased in these mutants (Table I). 284 Therefore, these results show that the simultaneous deficiency of NTRC and Trxs f or x 285 has a severe effect on photosynthesis performance, in line with the severe growth 286 inhibition phenotype of these mutants. 287 Such a defective photosynthetic performance of the ntrc-trxx and ntrc-trxf1f2 288 mutants suggested as well alterations in chloroplast morphology. To test this possibility, 289 the chloroplast structure in the different lines under study were analysed by 290 transmission electron microscopy. The ntrc mutant contains chloroplasts with different 291 levels of ultrastructural alterations, as previously reported (Perez-Ruiz et al., 2006; 292 Lepisto et al., 2009), while chloroplasts in the trxx and trxf1f2 mutants showed similar 293 morphology to those in the wild-type (Fig. 5). In contrast, the ntrc-trxx and, to a higher 294 extent, the ntrc-trxf1f2 mutants showed heterogeneous chloroplast ultrastructure, with a 295 number of chloroplasts showing clear alterations (Fig. 5). The most remarkable 296 characteristic of chloroplasts from both the ntrc-trxx and the ntrc-trxf1f2 mutants was 297 the increased number and size of plastoglobules (Fig. 5), which is indicative of 298 oxidative stress and senescence (Austin et al., 2006). 299 As an additional approach to determine the effect of the combined deficiencies 300 of NTRC and Trxs f or Trx x on chloroplast function, selected proteins indicative of the 301 different chloroplast compartments were analysed by Western blot. The ntrc-trxx and 302 ntrc-trxf1f2 mutants showed decreased levels of D1, a core component of PSII, PsaC, a 303 core component of PSI, lhca1, a component of PSI antenna, and the α and γ subunits of 304 the ATPase (Fig. 6). However, no significant differences in the content of lhcb1, a 305 component of the PSII antenna, and the stromal Rubisco large subunit was detected 9 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 306 (Fig. 6). Altogether, these results show that the combined deficiency of NTRC and x- or 307 f-type Trxs affect chloroplast structure and key components of the chloroplast 308 photosynthetic electron transport chain, which is in agreement with the low 309 photosynthetic performance and severe growth retarded phenotype of these plants. The 310 increased number and size of plastoglobules in these chloroplasts suggest that the 311 deficiency of the redox regulatory network of these organelles cause oxidative stress. 312 313 The combined deficiencies of NTRC and f- or x-type Trxs cause high mortality at 314 the seedling stage 315 316 A remarkable feature of the ntrc-trxx and the ntrc-trxf1f2 mutants was the low 317 number of individuals that reached the adult phase, indicating that the combined 318 deficiency of these plastidial redox systems might be critical at early developmental 319 stages. To investigate this possibility we analysed embryonic (seed germination) and 320 postembryonic (production of roots and true leaves) growth and development. Of the 321 Arabidopsis lines under study only the ntrc-trxf1f2 triple mutant showed decreased seed 322 germination capacity (Fig. S1). At 5 days after germination (dag), all lines had produced 323 cotyledons, though these were slightly smaller and showed paler green colour in the 324 case of the ntrc-trxf1f2 mutant (Fig. 7A). At a later stage, 8 dag, seedlings of the wild 325 type, as well as those of the ntrc, trxf1f2 and trxx mutants produced true leaves, a 326 process that was delayed in the ntrc-trxx and, to a higher extent, in the ntrc-trxf1f2 327 mutants (Fig. 7A, B). This delay was coincident with a sharp decrease of seedling 328 viability in the case of the ntrc-trxf1f2 triple mutant, so that up to 95% of the seedlings 329 of this line did not reach this stage of development (Fig. 7A, C). Though not as 330 dramatic, the ntrc-trxx double mutant also showed a high decrease of viability at this 331 stage of development (Fig. 7A, C). Seedlings of the ntrc-trxx and ntrc-trxf1f2 mutants 332 that survived the true leaf stage were able to continue development though with 333 impaired growth rate, which was more severe for the ntrc-trxf1f2 triple mutant, as 334 shown above (Fig. 1B). 335 The high mortality of the ntrc-trxx and the ntrc-trxf1f2 mutants at the transition 336 of seedling to true leaves suggests that photosynthesis performed by cotyledons 337 chloroplasts is critical for the development of vegetative organs. However, these assays 338 were performed in soil and, thus, the nutritional conditions could not be strictly 339 controlled. Therefore, we analysed in more detail the contribution of photosynthesis in 10 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 340 cotyledons to seedling development. To this end, the generation of roots as a sink organ 341 was studied in synthetic medium supplemented or not with sucrose under continuous 342 light. Like the wild type, seedlings of the ntrc, trxx and trxf1f2 mutants produced roots 343 regardless of the presence of sucrose in the medium (Fig. 8A-C). In contrast, root 344 formation was completely abolished or severely impaired in seedlings of the ntrc-trxf1f2 345 and ntrc-trxx mutants, respectively (Fig. 8A, B). Root elongation was restored by the 346 addition of external sucrose, though the rate of root growth was still decreased in the 347 ntrc-trxx and ntrc-trxf1f2 mutants, as compared to the other lines under analysis (Fig. 348 8A, C). These results show the relevance of redox regulation in the photosynthetic 349 activity of cotyledons chloroplasts for early plant development. 350 351 DISCUSSION 352 353 NTRC acts concertedly with different types of Trxs to sustain chloroplast function 354 355 Chloroplasts play important roles in plant metabolism and development. A key 356 component of the rapid adjustment of chloroplast metabolism to ever fluctuating light 357 conditions is redox regulation of enzyme activity, which relies on two thiol redox 358 systems, the NADPH-dependent NTRC and the Fdx-dependent FTR/Trx pathways 359 (Spinola et al., 2008; Cejudo et al., 2012). Thus, a central issue to understand 360 chloroplast redox regulation is to establish the functional relationship between these two 361 redox systems and the relevance of chloroplast redox regulation to plant development. 362 In this work we have addressed this issue by performing a comparative analysis of 363 Arabidopsis mutants combining the deficiency of NTRC with that of two Trxs 364 previously proposed to have unrelated functions such as Trxs f, which participate in 365 redox regulation of metabolic pathways (Michelet et al., 2013), and Trx x, which was 366 proposed to have antioxidant function (Collin et al., 2003). Based on our results we 367 propose that NTRC exerts a pivotal role in chloroplast redox regulation. Moreover, the 368 high mortality of the ntrc-trxx and, to a higher extent, the ntrc-trxf1f2 seedlings 369 uncovers the essential function of cotyledon chloroplast redox regulation for early 370 stages of plant development. 371 Chloroplasts harbour a complex set of different Trxs (Meyer et al., 2012; Balsera 372 et al., 2014). Based on extensive biochemical analyses it was established that Trxs of 373 the types m and f are relevant in redox regulation of metabolic pathways (Buchanan and 11 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 374 Balmer, 2005; Michelet et al., 2013; Okegawa and Motohashi, 2015), while those of the 375 types x and y were proposed to perform antioxidant activity (Collin et al., 2003; Collin 376 et al., 2004). However, despite the major function proposed for Trxs f in redox 377 regulation of central metabolic pathways such as the Calvin-Benson cycle, Arabidopsis 378 mutants devoid of Trx f1 (Thormahlen et al., 2013) or Trx f1 and f2 (Yoshida et al., 379 2015; Naranjo et al., 2016a) show a visible phenotype very similar to that of the wild 380 type, and so does an Arabidopsis mutant devoid of Trx x (Pulido et al., 2010). These 381 results indicate that alternative redox systems, either additional chloroplast Trxs or 382 NTRC, might compensate for the deficiency of these Trxs. In contrast, when the 383 deficiency of Trx f1 (Thormahlen et al., 2015), Trxs f1 and f2 or Trx x is combined with 384 the deficiency of NTRC a dramatic effect on plant phenotype is produced (Fig. 1B, C). 385 As previously reported (Thormahlen et al., 2015; Naranjo et al., 2016a, b), the 386 deficiency of NTRC causes more severe impairment on photosynthesis performance 387 than the deficiency of type f Trxs, as shown by the extensive NPQ at low light intensity, 388 the lower photosynthetic ETR and the rate of carbon fixation (Fig. 4A-C) in the ntrc 389 mutant. Remarkably, these parameters were dramatically affected in both the ntrc-trxx 390 and the ntrc-trxf1f2 mutants, thus showing the poor efficiency of light energy utilization 391 by these mutants, which has a wide effect on chloroplast metabolism as indicated by the 392 lower content of starch in these mutants (Table I). 393 The above discussed results provide an explanation for the severe growth 394 inhibition phenotype of the ntrc-trxx and the ntrc-trxf1f2 mutants and suggest the 395 concerted action of both systems in the redox regulation of common targets in vivo, a 396 notion further supported by the finding that NTRC interacts with well-established Trx 397 targets (Nikkanen et al., 2016). Indeed, NTRC has been shown to participate in the 398 regulation of enzymes such as AGPase (Michalska et al., 2009), and different enzymes 399 of the pathway of tetrapyrrole synthesis (Richter et al., 2013; Perez-Ruiz et al., 2014; 400 Yoshida and Hisabori, 2016), which were previously identified as Trx-regulated 401 (Ballicora et al., 2000; Geigenberger et al., 2005; Ikegami et al., 2007). Here we have 402 addressed this issue by analysing FBPase, a well-established redox regulated enzyme of 403 the Calvin-Benson cycle. The impairment of redox regulation caused by the combined 404 deficiencies of NTRC and Trxs f or x affected FBPase as shown by the lower level of 405 activity of this enzyme in leaves of the ntrc-trxx and the ntrc-trxf1f2 mutants (Fig. 2A). 406 Interestingly, the in-vivo level of FBPase reduction in response to light was lower in the 407 ntrc than in the trxf1f2 and trxx mutants (Fig. 2B). However, in vitro assays showed that 12 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 408 Trxs f1 and f2 are more efficient reductants of FBPase than Trx x, while NTRC is 409 unable to reduce the enzyme (Fig. 3). These results strongly support the notion that the 410 in vivo effect of NTRC on redox regulation of FBPase is indirect. The deficiency of 411 NTRC may cause an imbalance of the redox state of the chloroplast, which in turn 412 affects the regulatory function of Trxs f with respect of its targets. 413 Trxs f and x interact with different targets (Collin et al., 2003; Yoshida et al., 414 2015) and, hence, are considered to have different functions in chloroplast redox 415 regulation (Meyer et al., 2012). Thus, an additional issue addressed in this work was to 416 establish whether NTRC is specifically required for the activity of Trxs involved in 417 regulation of metabolic pathways such as Trxs f, or is also required for Trxs involved in 418 antioxidant defence such as Trx x. The trxx mutant shows a phenotype indistinguishable 419 of the wild type plants (Pulido et al., 2010), whereas the ntrc-trxx double mutant shows 420 a severe growth retarded phenotype (Fig. 1B, C) and impairment of photosynthetic 421 performance (Fig. 4A-C and Table I), thus indicating that the function of Trx x is 422 dispensable in plants containing NTRC, but is not properly exerted in the absence of 423 NTRC. It should be noted that the level of light-dependent FBPase reduction was 424 similarly affected in the trxx and the trxf1f2 mutants (Fig. 2B, C). However, Trxs f, 425 which are about four-fold more abundant than Trx x in Arabidopsis chloroplasts 426 (Okegawa and Motohashi, 2015), are more efficient reductants of FBPase in vitro than 427 Trx x (Fig. 3). The phenotype of the ntrc-trxf1f2 mutant is more severe than that of the 428 ntrc-trxx mutant either at the stage of adult plant (Fig. 1B), seed germination capacity 429 (Fig. S1), or seedling viability (Fig. 7A-C), suggesting that the functions of Trxs f are 430 more relevant for plant growth than those of Trx x. 431 The deficiency of the redox regulatory network in the ntrc-trxx and ntrc-trxf1f2 432 mutants has a dramatic impact on photosynthetic performance as shown by the high 433 levels of NPQ at low light intensities (Fig. 4A), the corresponding decrease of the 434 photosynthetic ETR (Fig. 4B), PSII activity based on the Fv/Fm ratio (Table I) and the 435 rate of net photosynthesis (Fig. 4C). Previous reports have shown that the deficiency of 436 NTRC causes the impairment of light utilization and slightly affects the redox state of 437 the γ subunit of ATPase, hence affecting the qE component of NPQ (Carrillo et al., 438 2016; Naranjo et al., 2016b). Therefore, the combined deficiency of NTRC and f- or x- 439 type Trxs affects the redox regulation of chloroplast metabolic pathways such as the 440 Calvin-Benson cycle but also the efficiency of light utilization, which ultimately might 441 be the reason of the severe growth retard phenotype shown by the ntrc-trxx and the ntrc13 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 442 trxf1f2 mutants. These results reveal the pivotal role of NTRC in the thiol redox 443 network of the chloroplast stroma integrating the feedback control of photochemical 444 reactions and regulation of metabolic pathways. Moreover, a combined deficiency in 445 NADPH and Fdx dependent chloroplast redox networks has severe effects on the 446 structure of these organelles as shown by the presence of chloroplasts with aberrant 447 ultrastructure in both the ntrc-trxx and the ntrc-trxf1f2 mutants (Fig. 5), and the lower 448 content of representative components of PSI, PSII and ATPase (Fig. 6). 449 Therefore, the severe growth phenotype of the ntrc-trxx and ntrc-trxf1f2 mutants 450 is the result of the effect of these mutations on a wide variety of chloroplast processes 451 from photochemical reactions to carbon metabolism. Our results indicate that the 452 regulation of these processes is coordinated and that NTRC exerts a central function in 453 this coordination. The question arising is the mechanistic basis of this central function 454 of NTRC in chloroplast redox regulation. A possibility is that the lower efficiency of 455 light energy utilization caused by the lack of NTRC (Fig. 4A-C) affects the availability 456 of reducing equivalents for Trxs, hence impairing the light-dependent redox regulation 457 of Calvin-Benson enzymes such as FBPase. This would provide an explanation for the 458 lower level of reduction of FBPase in NTRC-deficient plants (Fig. 2A-C) despite the 459 fact that NTRC is unable to reduce FBPase in vitro (Fig. 3). An additional aspect to be 460 taken into account is that the deficiency of NTRC may perturb chloroplast redox 461 balance affecting the Trx activity. In this regard, it should be noted that the chloroplasts 462 of the ntrc-trxx and ntrc-trxf1f2 mutants show higher number and size of plastoglobules 463 (Fig. 5), which are indicative of oxidative stress (Austin et al., 2006), hence suggesting 464 that the severe alteration of the redox regulatory network in these mutants has also 465 important effects on the antioxidant machinery of the chloroplast. Indeed, NTRC is an 466 efficient reductant of the peroxide scavenging enzyme 2-Cys Prx (Pérez-Ruiz et al., 467 2006; Pulido et al., 2010). 468 469 Photosynthetic activity of cotyledon chloroplasts is essential for early plant 470 development 471 472 Most studies on chloroplast redox regulation have been performed at the adult 473 plant stage, hence when leaves are fully developed. However, beside the severe growth 474 inhibition of the ntrc-trxx and ntrc-trxf1f2 mutants (Fig. 1B, C), a remarkable feature of 475 the phenotype of these mutants was the low number of individuals that reached the adult 14 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 476 phase (Fig. 7A-C), suggesting that the photosynthetic function becomes critical at 477 earlier stages of plant development. It is known that embryonic photosynthesis affects 478 seed vigour (Allorent et al., 2015), thus, the lower germination capacity of seeds of the 479 ntrc-trxf1f2 (Fig. S1) suggests the relevance of plastid redox regulation in seed 480 germination. It should be noted that the ntrc-trxx mutant shows germination capacity 481 similar to those of the wild type (Fig. S1), which is in line with the other phenotypic 482 parameters here analysed, most of them being more affected in the ntrc-trxf1f2 mutant 483 than in the ntrc-trxx mutant. 484 A critical stage in the plant life cycle occurs after seed germination when the 485 growing seedling depends on the heterotrophic use of seed storage compounds until 486 autotrophic growth is possible (Kircher and Schopfer, 2012). Once germinated, the 487 cotyledons of the ntrc-trxx and the ntrc-trxf1f2 mutants were slightly smaller and 488 showed yellowish green colour, as compared with cotyledons from wild type, ntrc, trxx 489 or trxf1f2 mutants (Fig. 7A). This indicates that the developmental program of 490 photomorphogenesis is not compromised by the impairment of chloroplast redox 491 regulation at this early stage of development. This notion was further supported by 492 growth tests in synthetic medium supplemented or not with sucrose (Fig. 8A). In 493 contrast with the wild type and the ntrc, trxx and trxf1f2 mutants, which produced roots 494 in the absence of sucrose, root production was severely defective in the ntrc-trxx 495 mutant, and completely abolished in the ntrc-trxf1f2 mutant unless sucrose was added to 496 the medium to compensate for decreased photosynthesis (Fig. 8A-C). These results 497 provide further evidence showing that the impairment of redox regulation caused by the 498 combined deficiency in NTRC and Trxs f or Trx x severely affects photosynthetic 499 performance of cotyledons chloroplasts. However, while in adult plants this failure 500 causes growth retardation but is not lethal, in the case of cotyledons it produces the 501 delay in the generation of new organs such as roots and true leaves, which provokes 502 increased seedling mortality (Fig. 7A-C). Photomorphogenesis, the reprograming of the 503 seedling growth promoted by light, has received much attention and a complex set of 504 light perception and signalling components have been identified (Huang et al., 2014; 505 Wu, 2014; Pogson et al., 2015). Less attention has been given to the contribution of 506 photosynthesis to this developmental process. The reduced viability of the ntrc-trxx and, 507 to a higher extent, the ntrc-trxf1f2 seedlings uncovers the essential function of redox 508 regulation of photosynthesis at this developmental stage. 509 EXPERIMENTAL PROCEDURES 15 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 510 511 Biological material and growth conditions 512 Arabidopsis thaliana wild type (ecotype Columbia) and mutant plants were 513 routinely grown in soil in growth chambers under long-day (16-h light/8-h darkness) 514 conditions at 22ºC during the light and 20ºC during the dark periods and a light intensity 515 of 125 µE m-2 s-1. For in vitro culture experiments, seeds were surface sterilized using 516 chlorine gas for 16 h, plated on Murashige and Skoog (MS) medium (DUCHEFA), pH 517 5.8 containing 0.35% Gelrite (DUCHEFA) in the presence or absence of 0.5% (w/v) 518 sucrose and stratified at 4ºC for 2 to 3 days. Mutant plants ntrc, trxx and trxf1f2 were 519 described previously (Serrato et al., 2004; Pulido et al., 2010; Naranjo et al., 2016a) 520 (Supplemental Table S1). The single ntrc mutant was manually crossed with the single 521 trxx mutant and the double trxf1f2 mutant. Seeds resulting from these crosses were 522 checked for heterozygosity of the T-DNA insertions in the NTRC, TRX x, TRX f1 and 523 TRX f2 genes, respectively. Plants were then self-pollinized and the ntrc-trxx and ntrc- 524 trxf1f2 mutants were identified in the progeny by PCR analysis of genomic DNA. 525 Primer sequences for PCR are listed in Supplemental Table S2. 526 527 RNA extraction and RT-qPCR analysis 528 529 Total RNA was extracted using Trizol reagent (Invitrogen). cDNA synthesis was 530 performed with 2 µg of total RNA using the Maxima first-strand cDNA synthesis kit 531 (Fermentas) according to manufacturer’s instructions. Real-time quantitative PCR (RT- 532 qPCR) was performed using an IQ5 real-time PCR detection system (Bio-Rad). A 533 standard thermal profile (95 °C, 3 min; 40 cycles at 95 °C for 10 s, and 60 °C for 30 s) 534 was used for all reactions. After the PCR, a melting curve analysis (55–94 °C at 0.5 535 °C/30 s) was performed to confirm the specificity of the amplicon and to exclude 536 primer-dimers or non-specific amplification. Oligonucleotides used for RT-qPCR 537 analyses are listed in Supplementary Table S3. Expression levels were normalized using 538 two reference genes: ACTIN and AT5G25760 (Czechowski et al., 2005). 539 540 Protein extraction, FBPase activity, alkylation assays and Western blot analysis 541 542 Plant tissues were ground with a mortar and pestle under liquid nitrogen. FBPase 543 activity was determined as previously reported (Rojas-González et al., 2015) from 16 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 544 leaves of plants grown for 4 weeks under long-day photoperiod and harvested at 12 h of 545 the day period. For the determination of the redox state of thiol-regulated enzymes in 546 vivo, alkylation assays using methyl-maleimide polyethylene glycol (MM(PEG)24, 547 Thermo Scientific) were performed as described previously (Naranjo et al., 2016a). To 548 study chloroplast protein levels, the Minute Chloroplast Isolation Kit (Invent 549 Biotechnologies) was used following the manufacturer’s instructions. Intact chloroplasts 550 were isolated from leaves of plants adapted to the dark during 30 min and total protein 551 content was quantified using the Bradford reagent (BIO-RAD). 552 Protein samples were subjected to SDS-PAGE under reducing or non-reducing 553 conditions using various acrylamide gel concentrations, as stated in the figure legends, 554 and transferred onto nitrocellulose membranes, which were probed with the indicated 555 antibody. Specific anti-NTRC antibodies were previously raised in our laboratory 556 (Serrato et al., 2004). Other antibodies (D1, lhcb1, PsaC, lhca1, α-ATPase, γ-ATPase, 557 RBC-L) were purchased from Agrisera (Sweden). 558 559 In vitro FBPase reduction assay 560 561 Arabidopsis chloroplast FBPase (2.5 μM) was incubated for 30 min at 22ºC with 562 increasing concentration (0-10 μM) of NTRC, Trxs f1 and f2 or Trx x in reaction 563 mixtures containing 100 mM Tris-HCl pH 8.0 and 0.1 mM DTT. In order to prevent 564 further oxidations, free thiol were alkylated by incubation in the dark for 30 min at 37 565 ºC in the presence of equals volumes of a solution containing 60 mM iodoacetamide 566 (IAM), 2% CHAPS and 100 mM Tris-HCl pH 8.0. 567 568 Determination of chlorophylls, starch and FBPase activity 569 570 Leaf discs were weighed and frozen in liquid nitrogen. After extraction in 1 mL 571 methanol for 16 h at 4 °C, chlorophyll levels were measured spectrophotometrically, as 572 described in Porra et al. (1989), and normalized to fresh weight. Starch contents were 573 determined as previously reported (Rojas-González et al., 2015) from rosette leaves of 574 plants grown for 4 weeks under long-day photoperiod and harvested at 12 h of the day 575 period. 576 577 Measurements of chlorophyll a fluorescence and rate of carbon assimilation (AN) 17 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 578 579 Room temperature chlorophyll fluorescence was measured using a pulse- 580 amplitude modulation fluorimeter (DUAL-PAM-100, Walz, Effeltrich, Germany). The 581 maximum quantum yield of PSII was assayed after incubation of plants in the dark for 582 30 min by calculating the ratio of the variable fluorescence, Fv, to maximal 583 fluorescence, Fm (Fv/Fm). Induction-recovery curves were performed using red (635 nm) 584 actinic light at 42 μE m−2 s−1 for 8 min. Saturating pulses of red light at 10000 μE m−2 585 s−1 intensity and 0.6 s duration were applied every 60 s and recovery in darkness was 586 recorded for up to 10 min. The parameters Y(II) and Y(NPQ) corresponding to the 587 respective quantum yields of PSII photochemistry and non-photochemical quenching 588 (NPQ) were calculated by the DUAL-PAM-100 software according to the equations in 589 (Kramer et al., 2004). Relative linear electron transport rates were measured in leaves of 590 pre-illuminated plants by applying stepwise increasing actinic light intensities up to 591 2000 μE m−2 s−1. 592 Net CO2 assimilation rate (AN) was measured in leaves from wild type and 593 mutant plants grown under long-day conditions for 4 weeks using an open gas exchange 594 system Li-6400 equipped with the chamber head (Li-6400–40). Leaves were dark- 595 adapted and then illuminated with photosynthetically active radiation (PAR) of 125 μE 596 m−2 s−1 until the rate of CO2 assimilation was stabilised. Six leaves were measured per 597 line. Measurements were performed by the Service for Photosynthesis, Instituto de 598 Recursos Naturales y Agrobiología, Sevilla (Spain). 599 600 Determination of seedling development and survival 601 602 The growth and development of the lines under study were monitored based on 603 two parameters: the formation of true (post-embryonic) leaves and seedling mortality. 604 For each line, three sets of at least 60 seeds were sown on soil and grown during 28 605 days under long-day conditions. Seedling survival and true leaves generation were 606 scored at 3-4 days intervals. Seedlings that were still green/greenish, considered as 607 survivors, were quantified to calculate the survival rate. Seedlings that exhibit true 608 leaves were quantified to determine the rate of seedlings reaching the true leaf stage. 609 610 Root growth and germination capacity measurements 611 18 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 612 For root growth assays, at least 30 seedlings were grown for 7 days on vertically 613 oriented MS plates in the presence or absence of 0.5% (w/v) sucrose. Root elongation 614 was scored at 1 day intervals from day 3 until day 7. 615 For germination studies, five sets of at least 100 seeds were sown on 616 horizontally oriented MS plates and the percentage of germinated seeds was recorded at 617 day 2 and day 7. 618 619 Transmission electron microscopy analysis 620 621 Fully expanded leaves from plants cultured under long day photoperiod were 622 collected at bolting time, approx. after 28 days of growth, just when the first floral bud 623 was visible. Since growth of ntrc-trxx and ntrc-trxf1f2 plants is delayed, the leaves of 624 these mutants were collected after approx. 60 days of growth. Small pieces (2 mm2) of 625 leaves were cut with a razor blade and immediately fixed in 4% glutaraldehyde in 0.1 M 626 Na-cacodylate buffer, pH 7.4 (3 h at 4 ºC, under vacuum). After fixation, samples were 627 rinsed three times for 30 min at 4 ºC with the same buffer. Samples were post-fixed in 628 1% osmium tetraoxide in cacodilate buffer (0.1 M, pH 7.4) for 1 h at 4 ºC. After 629 washing, samples were immersed in 2% uranyl acetate, dehydrated through a gradient 630 acetone series (50, 70, 90, 100%) and embedded in Spurr resin. Semi-thin sections (300 631 nm thickness) were obtained with a glass knife and stained with 1% toluidine blue for 632 cell localization and reorientation using a conventional optic microscope. Once a 633 suitable block face of the selected area was trimmed, several ultrathin sections (70 nm) 634 were obtained using an ultramicrotome (Leica UC7) equipped with diamond knife 635 (Diatome) and collected on 200 mesh cupper grids. Sections were examined in a Zeiss 636 Libra 120 transmission electron microscope and a digitized (2048 x 2048 x 16 bits) 637 using an on axis-mounted TRS camera. Sample post-fixation and cutting were 638 performed by the Microscopy Service at the Centro de Investigación, Tecnología e 639 Innovación (CITIUS) from the University of Seville. 640 641 642 643 644 19 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 645 Table I. Effect of the combined deficiencies of NTRC and Trxs f or Trx x on PSII 646 stability and starch content 647 Plant line Fv/Fm WT ntrc trxx trxf1f2 ntrc-trxx ntrc-trxf1f2 0.78±0.03a 0.76±0.02b 0.75±0.03b 0.79±0.02a 0.62±0.11c 0.52±0.10d 8.11±2.06a 2.25±0.49cd 4.36±0.81b 3.57±1.65bc 0.82±0.34d 1.59±0.51d Starch (μg/mg FW) 648 649 The maximum PSII quantum yield was determined as variable fluorescence (Fv) to 650 maximal fluorescence (Fm), Fv/Fm, in dark adapted leaves of plants grown under long- 651 day conditions. The Fv/Fm values ± standard deviation (SD) is the average of at least 10 652 measurements. The content of starch was determined from rosette leaves of plants 653 grown under long-day for 31 days and harvested after 12 h of the light period. Values 654 represent mean ± SD of three independent samples. Letters indicate significant 655 differences with the Student´s t test (Fv/Fm) or the Tukey’s Least Significance Difference 656 test (starch content) and a confidence interval of 95%. 657 658 659 SUPPLEMENTAL DATA 660 661 662 663 664 665 Fig. S1. Effect of the deficiency in NTRC and x- or f-type Trxs on the germination capacity. Table S1. Arabidopsis mutants used in this study. Table S2. Oligonucleotides used for determination of Arabidopsis mutant genotypes. Table S3. Oligonucleotides used for RT-qPCR analyses. 666 Figure 1. The level of NTRC, Trx x, Trx f1 and Trx f2 transcripts and growth 667 phenotype of wild type and mutant plants. 668 A, The contents of transcripts of the genes NTRC, TRX x, TRX f1 and TRX f2 were 669 determined by RT-qPCR from total RNA samples, which were extracted from leaves of 670 Arabidopsis wild type and mutant lines, as indicated. The pairs of oligonucleotides used 671 for cDNA amplification are indicated in Supplementary Table S3. Transcript levels 672 were normalized to ACTIN and the AT5G25760 genes and referred to the level of each 673 of the genes in wild type plants. Determinations were performed three times and mean 674 values ± standard error (SE) are represented. B, Plants of wild type and mutant lines that 20 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 675 were grown under long-day conditions (16 h light / 8 h darkness, light intensity 125 μE 676 m-2 s-1) during 22 days. C, Chlorophyll content was determined from leaf discs (n=6) 677 and average values ±SE are represented. Letters indicate significant differences with the 678 Student’s t test and a confidence interval of 99%. 679 Figure 2. FBPase activity and in vivo redox state of FBPase in wild type and 680 mutant lines. 681 A, FBPase activity was assayed in leave extracts from plants grown for four weeks 682 under long-day photoperiod and harvested at 12 h of the day period. Results are the 683 mean ± standard error (SE) from three biological replicates. Different letters above each 684 bar represent significant difference (P < 0.05) determined by one-way analysis of 685 variance followed by Tukey’s post-test. B, The in vivo redox state of FBPase was 686 determined by derivatization of thiols with the alkylating agent MM(PEG)24, as 687 indicated in Methods. Plants of the wild type and mutant lines were grown under long 688 day conditions for four weeks. Samples were harvested at the end of the period of 689 darkness (D) and then illuminated for 30 min with light intensities of 125 μE m-2 s-1 690 (growth light, GL) or 500 μE m-2 s-1 (high light, HL). Protein extracts from leaves were 691 subjected to SDS-PAGE under non-reducing conditions, transferred onto nitrocellulose 692 filter and probed with an anti-FBPase antibody. C, Band intensities were quantified 693 (ScionImage) and the percentage of reduction was calculated as the ratio between the 694 shifted band (reduced form) and the sum of reduced and oxidized forms. Each value is 695 the mean of three independent experiments ± standard error (SE) and letters indicate 696 significant differences between mutants with the Student’s t test at 95% confidence 697 interval. 698 699 Figure 3. In vitro reduction of FBPase by NTRC and Trxs x or f. 700 701 The in vitro FBPase reduction assay was carried out by incubating a fixed concentration 702 of the purified enzyme (2.5 μM) in the presence of 0.1 mM DTT, with increasing 703 concentrations, as indicated, of NTRC, Trx f1, Trx f2 and Trx x. red, reduced; oxi, 704 oxidized. 705 706 707 Figure 4. Light-dependent NPQ, linear photosynthetic electron transport and net 708 CO2 fixation rate in wild type and mutant lines. 21 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 709 Quantum yields of NPQ (A) and relative linear electron transport rates of photosystem 710 II, ETR (II) (B), were measured in pre-illuminated attached leaves of plants grown at 711 125 µE m-2 s-1 under long-day conditions. Chlorophyll fluorescence of photosystem II 712 was determined using a pulse-amplitude modulation fluorimeter. Determinations were 713 performed at least five times and each data point is the mean ± SE. White and black bars 714 indicate light and dark periods. C, Net CO2 assimilation rate (AN) was measured using 715 an open gas exchange system in leaves of plants grown during 4 weeks under long-day 716 photoperiod, which were dark-adapted and then illuminated with a PAR of 125 μE m−2 717 s−1. Six leaves were measured per line and mean mean ± SE are represented. Letters 718 indicate significant differences with the Tukey Test and a confidence interval of 99.9%. 719 720 Figure 5. Electron transmission microscopy analysis of chloroplast structure from 721 wild type and mutant lines. 722 Leaves of plants cultured under a 16-h light/8-h dark regime were collected after the 723 first symptoms of bolting. An increase in plastoglobule (white arrowheads) number, size 724 and association is observed in ntrc-trxx and ntrc-trxf1f2 mutant plants as compared to 725 wild-type and single mutant plants. Bars represent 1 µm. c, chloroplasts; cw, cell wall; 726 v, vacuoles; S, starch granules. 727 Figure 6. Level of representative chloroplast proteins in wild type and mutant 728 plants. 729 Western blot analysis of the content of representative components of photosynthetic 730 electron transport (D1, Lhcb1, PsaC and Lhca1), ATP synthesis (α-ATPase and γ- 731 ATPase) and carbon assimilation (RBC-L) in the lines under study. Chloroplasts of the 732 indicated lines were isolated from 5-week old long-day grown plants and fractionated 733 into thylakoid and stromal fractions as described in Methods. Protein samples 734 corresponding to thylakoids (0.5 μg of chlorophyll) or stroma (1 μg of protein) were 735 subjected to SDS-PAGE under reducing conditions, transferred to nitrocellulose filters 736 and probed with antibodies against thylakoid (D1, Lhcb1, PsaC, Lhca1, α-ATPase, γ- 737 ATPase) and stromal (RBC-L) proteins. Additional amounts (3x and 1/4x) of wild type 738 extracts were loaded for comparison. The experiment was performed twice with similar 739 results. 740 22 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 741 Figure 7. Redox regulation impairment provokes high mortality at the seedling 742 stage. 743 A, Seeds of the wild type and mutant lines, as indicated, were allowed to germinate on 744 soil and representative seedlings at 5, 8 and 11 days after germination (dag) are shown. 745 Bars represent 0.5 cm. For each line, the percentage of seedlings with emerging true 746 leaves (B) and the percentage of seedlings that remained alive (C) at the indicated dag 747 were determined and represented. The experiment was performed twice and means 748 values ± SE from three replicates of each experiment are represented. 749 750 Figure 8. Effect of sucrose on root production from seedlings of the wild type and 751 mutant lines. 752 Seedlings were grown on MS synthetic medium supplemented or not with 0.5% (w/v) 753 sucrose. A, Seedlings of the different lines, as indicated, after 7 days of growth under 754 continuous light (125 μE m-2 s-1). Root growth in the absence (B) or presence (C) of 755 added sucrose was monitored and mean values ± SE from three replicates are 756 represented. 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 23 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 775 776 777 778 779 References 780 Alkhalfioui F, Renard M, Montrichard F (2007) Unique properties of NADP- 781 thioredoxin reductase C in legumes. J Exp Bot 58: 969-978 782 Allorent G, Osorio S, Vu JL, Falconet D, Jouhet J, Kuntz M, Fernie AR, Lerbs- 783 Mache S, Macherel D, Courtois F, Finazzi G (2015) Adjustments of 784 embryonic photosynthetic activity modulate seed fitness in Arabidopsis 785 thaliana. New Phytol 205: 707-719 786 Austin II JR, Frost E, Vidi PA, Kessler F, Staehelin LA (2006) Plastoglobules are 787 lipoprotein subcompartments of the chloroplast that are permanently coupled to 788 thylakoid membranes and contain biosynthetic enzymes. Plant Cell 18: 1693- 789 1703 790 Balsera M, Uberegui E, Schürmann P, Buchanan BB (2014) Evolutionary 791 development of redox regulation in chloroplasts. Antioxid Redox Signal 21: 792 1327-1355 793 Ballicora MA, Frueauf JB, Fu Y, Schürmann P, Preiss J (2000) Activation of the 794 potato tuber ADP-glucose pyrophosphorylase by thioredoxin. J Biol Chem 275: 795 1315-1320 796 797 Buchanan BB, Balmer Y (2005) Redox regulation: a broadening horizon. Annu Rev Plant Biol 56: 187-220 798 Carrillo LR, Froehlich JE, Cruz JA, Savage L, Kramer DM (2016) Multi-level 799 regulation of the chloroplast ATP synthase: The chloroplast NADPH 800 thioredoxin reductase C (NTRC) is required for redox modulation specifically 801 under low irradiance. Plant J 87: 654-663 802 Cejudo FJ, Ferrández J, Cano B, Puerto-Galán L, Guinea M (2012) The function of 803 the NADPH thioredoxin reductase C-2-Cys peroxiredoxin system in plastid 804 redox regulation and signalling. FEBS Lett 586: 2974-2980 805 Collin V, Issakidis-Bourguet E, Marchand C, Hirasawa M, Lancelin JM, Knaff 806 DB, Miginiac-Maslow M (2003) The Arabidopsis plastidial thioredoxins: new 807 functions and new insights into specificity. J Biol Chem 278: 23747-23752 24 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 808 Collin V, Lamkemeyer P, Miginiac-Maslow M, Hirasawa M, Knaff DB, Dietz KJ, 809 Issakidis-Bourguet E (2004) Characterization of plastidial thioredoxins from 810 Arabidopsis belonging to the new y-type. Plant Physiol 136: 4088-4095 811 812 813 814 Couturier J, Chibani K, Jacquot JP, Rouhier N (2013) Cysteine-based redox regulation and signaling in plants. Front Plant Sci 4: 105 Cséke C, Buchanan BB (1986) Regulation of the formation and utilization of photosynthate in leaves. Biochim Biophys Acta 853: 43-63 815 Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR (2005) Genome- 816 wide identification and testing of superior reference genes for transcript 817 normalization in Arabidopsis. Plant Physiol 139: 5-17 818 819 Geigenberger P, Kolbe A, Tiessen A (2005) Redox regulation of carbon storage and partitioning in response to light and sugars. J Exp Bot 56: 1469-1479 820 Huang X, Ouyang X, Deng XW (2014) Beyond repression of photomorphogenesis: 821 role switching of COP/DET/FUS in light signaling. Curr Op Plant Biol 21: 96- 822 103 823 Ikegami A, Yoshimura N, Motohashi K, Takahashi S, Romano PG, Hisabori T, 824 Takamiya K, Masuda T (2007) The CHLI1 subunit of Arabidopsis thaliana 825 magnesium chelatase is a target protein of the chloroplast thioredoxin. J Biol 826 Chem 282: 19282-19291 827 828 Inaba T, Ito-Inaba Y (2010) Versatile roles of plastids in plant growth and development. Plant Cell Physiol 51: 1847-1853 829 Jacquot JP, Eklund H, Rouhier N, Schürmann P (2009) Structural and evolutionary 830 aspects of thioredoxin reductases in photosynthetic organisms. Trends Plant Sci 831 14: 336-343 832 833 Jarvis P, López-Juez E (2013) Biogenesis and homeostasis of chloroplasts and other plastids. Nat Rev Mol Cell Biol 14: 787-802 834 Kircher S, Schopfer P (2012) Photosynthetic sucrose acts as cotyledon-derived long- 835 distance signal to control root growth during early seedling development in 836 Arabidopsis. Proc Natl Acad Sci USA 109: 11217-11221 837 Kirchsteiger K, Ferrández J, Pascual MB, González M, Cejudo FJ (2012) NADPH 838 thioredoxin reductase C is localized in plastids of photosynthetic and 839 nonphotosynthetic tissues and is involved in lateral root formation in 840 Arabidopsis. Plant Cell 24: 1534-1548 25 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 841 Kramer DM, Johnson G, Kiirats O, Edwards GE (2004) New fluorescence 842 parameters for the determination of q(a) redox state and excitation energy fluxes. 843 Photosynth Res 79: 209-218 844 Lepistö A, Kangasjärvi S, Luomala EM, Brader G, Sipari N, Keränen M, 845 Keinänen M, Rintamäki E (2009) Chloroplast NADPH-thioredoxin reductase 846 interacts with photoperiodic development in Arabidopsis. Plant Physiol 149: 847 1261-1276 848 Lepistö A, Pakula E, Toivola J, Krieger-Liszkay A, Vignols F, Rintamäki E (2013) 849 Deletion of chloroplast NADPH-dependent thioredoxin reductase results in 850 inability to regulate starch synthesis and causes stunted growth under short-day 851 photoperiods. J Exp Bot 64: 3843-3854 852 Meyer Y, Belin C, Delorme-Hinoux V, Reichheld JP, Riondet C (2012) Thioredoxin 853 and glutaredoxin systems in plants: molecular mechanisms, crosstalks, and 854 functional significance. Antioxid Redox Signal 17: 1124-1160 855 Michalska J, Zauber H, Buchanan BB, Cejudo FJ, Geigenberger P (2009) NTRC 856 links built-in thioredoxin to light and sucrose in regulating starch synthesis in 857 chloroplasts and amyloplasts. Proc Natl Acad Sci USA 106: 9908-9913 858 Michelet L, Zaffagnini M, Morisse S, Sparla F, Perez-Perez ME, Francia F, Danon 859 A, Marchand CH, Fermani S, Trost P, Lemaire SD (2013) Redox regulation 860 of the Calvin-Benson cycle: something old, something new. Front Plant Sci 4: 861 470 862 Moon JC, Jang HH, Chae HB, Lee JR, Lee SY, Jung YJ, Shin MR, Lim HS, 863 Chung WS, Yun DJ, Lee KO (2006) The C-type Arabidopsis thioredoxin 864 reductase ANTR-C acts as an electron donor to 2-Cys peroxiredoxins in 865 chloroplasts. Biochem Biophys Res Commun 348: 478-484 866 Naranjo B, Díaz-Espejo A, Lindahl M, Cejudo FJ (2016a) Type-f thioredoxins have 867 a role in the short-term activation of carbon metabolism and their loss affects 868 growth under short-day conditions in Arabidopsis thaliana. J Exp Bot 67: 1951- 869 1964 870 Naranjo B, Mignee C, Krieger-Liszkay A, Hornero-Méndez D, Gallardo-Guerrero 871 L, Cejudo FJ, Lindahl M (2016b) The chloroplast NADPH thioredoxin 872 reductase C, NTRC, controls non-photochemical quenching of light energy and 873 photosynthetic electron transport in Arabidopsis. Plant Cell Environ 39: 804-822 26 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 874 Nikkanen L, Toivola J, Rintamäki E (2016) Crosstalk between chloroplast 875 thioredoxin systems in regulation of photosynthesis. Plant Cell Environ 39: 876 1691-1705 877 Okegawa Y, Motohashi K (2015) Chloroplastic thioredoxin m functions as a major 878 regulator of Calvin cycle enzymes during photosynthesis in vivo. Plant J 84: 879 900-913 880 Pérez-Ruiz JM, Guinea M, Puerto-Galán L, Cejudo FJ (2014) NADPH thioredoxin 881 reductase C is involved in redox regulation of the Mg-chelatase I subunit in 882 Arabidopsis thaliana chloroplasts. MolPlant 7: 1252-1255 883 Pérez-Ruiz JM, Spinola MC, Kirchsteiger K, Moreno J, Sahrawy M, Cejudo FJ 884 (2006) Rice NTRC is a high-efficiency redox system for chloroplast protection 885 against oxidative damage. Plant Cell 18: 2356-2368 886 887 Pogson BJ, Ganguly D, Albrecht-Borth V (2015) Insights into chloroplast biogenesis and development. Biochim Biophys Acta 1847: 1017-1024 888 Porra RJ, Thompson WA, Kriedemann PE (1989) Determination of accurate 889 extintion coefficients and simultaneous equations for assaying chlorophylls a 890 and b extracted with four different solvents: verification of the concentration of 891 chlorophyll standards by atomic absorption spectroscopy. Biochim Biophys Acta 892 975: 384–394 893 Pulido P, Spinola MC, Kirchsteiger K, Guinea M, Pascual MB, Sahrawy M, 894 Sandalio LM, Dietz KJ, González M, Cejudo FJ (2010) Functional analysis 895 of the pathways for 2-Cys peroxiredoxin reduction in Arabidopsis thaliana 896 chloroplasts. J Exp Bot 61: 4043-4054 897 Richter AS, Peter E, Rothbart M, Schlicke H, Toivola J, Rintamäki E, Grimm B 898 (2013) Posttranslational influence of NADPH-dependent thioredoxin reductase 899 C on enzymes in tetrapyrrole synthesis. Plant Physiol 162: 63-73 900 Rojas-González JA, Soto-Suárez M, García-Díaz A, Romero-Puertas MC, 901 Sandalio LM, Mérida A, Thormählen I, Geigenberger P, Serrato AJ, 902 Sahrawy M (2015) Disruption of both chloroplastic and cytosolic FBPase genes 903 results in a dwarf phenotype and important starch and metabolite changes in 904 Arabidopsis thaliana. J Exp Bot 66: 2673-2689 905 906 Schürmann P, Buchanan BB (2008) The ferredoxin/thioredoxin system of oxygenic photosynthesis. Antioxid Redox Signal 10: 1235-1274 27 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 907 Serrato AJ, Fernández-Trijueque J, Barajas-López JD, Chueca A, Sahrawy M 908 (2013) Plastid thioredoxins: a "one-for-all" redox-signaling system in plants. 909 Front Plant Sci 4: 463 910 Serrato AJ, Pérez-Ruiz JM, Spinola MC, Cejudo FJ (2004) A novel NADPH 911 thioredoxin reductase, localized in the chloroplast, which deficiency causes 912 hypersensitivity to abiotic stress in Arabidopsis thaliana. J Biol Chem 279: 913 43821-43827 914 Serrato AJ, Yubero-Serrano EM, Sandalio LM, Muñoz-Blanco J, Chueca A, 915 Caballero JL, Sahrawy M (2009) cpFBPaseII, a novel redox-independent 916 chloroplastic isoform of fructose-1,6-bisphosphatase. Plant Cell Environ 32: 811- 917 827. 918 Spínola MC, Pérez-Ruiz JM, Pulido P, Kirchsteiger K, Guinea M, González M, 919 Cejudo FJ (2008) NTRC new ways of using NADPH in the chloroplast. Physiol 920 Plant 133: 516-524 921 Thormählen I, Meitzel T, Groysman J, Ochsner AB, von Roepenack-Lahaye E, 922 Naranjo B, Cejudo FJ, Geigenberger P (2015) Thioredoxin f1 and NADPH- 923 dependent thioredoxin reductase C have overlapping functions in regulating 924 photosynthetic metabolism and plant growth in response to varying light 925 conditions. Plant Physiol 169: 1766-1786 926 Thormählen I, Ruber J, von Roepenack-Lahaye E, Ehrlich SM, Massot V, 927 Hummer C, Tezycka J, Issakidis-Bourguet E, Geigenberger P (2013) 928 Inactivation of thioredoxin f1 leads to decreased light activation of ADP-glucose 929 pyrophosphorylase and altered diurnal starch turnover in leaves of Arabidopsis 930 plants. Plant Cell Environ 36: 16-29 931 932 933 934 935 936 Waters MT, Langdale JA (2009) The making of a chloroplast. EMBO J 28: 28612873 Wu SH (2014) Gene expression regulation in photomorphogenesis from the perspective of the central dogma. Annu Rev Plant Biol 65: 311-333 Yoshida K, Hara S, Hisabori T (2015) Thioredoxin selectivity for thiol-based redox regulation of target proteins in chloroplasts. J Biol Chem 290: 14278-14288 937 Yoshida K, Hisabori T (2016) Two distinct redox cascades cooperatively regulate 938 chloroplast functions and sustain plant viability. Proc Natl Acad Sci USA 113: 939 3967-3976 940 28 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 941 942 943 29 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Figure 1. The level of NTRC, Trx x, Trx f1 and Trx f2 transcripts and growth phenotype of wild type and mutant plants. A, The contents of transcripts of the genes NTRC, TRX x, TRX f1 and TRX f2 were determined by RT-qPCR from total RNA samples, which were extracted from leaves of Arabidopsis wild type and mutant lines, as indicated. The pairs of oligonucleotides used for cDNA amplification are indicated in Supplementary Table S3. Transcript levels were normalized to ACTIN and the AT5G25760 genes and referred to the level of each of the genes in wild type plants. Determinations were performed three times and mean values ± standard error (SE) are represented. B, Plants of wild type and mutant lines that were grown under long-day conditions (16 h light / 8 h darkness, light intensity 125 μE m-2 s-1) during 22 days. C, Chlorophyll content was determined from leaf discs (n=6) and average values ±SE are represented. Letters indicate significant differences with the Student’s t test and a confidence interval of 99%. 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Figure 2. FBPase activity and in vivo redox state of FBPase in wild type and mutant lines. A, FBPase activity was assayed in leave extracts from plants grown for four weeks under long-day photoperiod and harvested at 12 h of the day period. Results are the mean ± standard error (SE) from three biological replicates. Different letters above each bar represent significant difference (P < 0.05) determined by one-way analysis of variance followed by Tukey’s post-test. B, The in vivo redox state of FBPase was 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. determined by derivatization of thiols with the alkylating agent MM(PEG)24, as indicated in Methods. Plants of the wild type and mutant lines were grown under long day conditions for four weeks. Samples were harvested at the end of the period of darkness (D) and then illuminated for 30 min with light intensities of 125 μE m-2 s-1 (growth light, GL) or 500 μE m-2 s-1 (high light, HL). Protein extracts from leaves were subjected to SDS-PAGE under non-reducing conditions, transferred onto nitrocellulose filter and probed with an anti-FBPase antibody. C, Band intensities were quantified (ScionImage) and the percentage of reduction was calculated as the ratio between the shifted band (reduced form) and the sum of reduced and oxidized forms. Each value is the mean of three independent experiments ± standard error (SE) and letters indicate significant differences between mutants with the Student’s t test at 95% confidence interval. 2 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Figure 3. In vitro reduction of FBPase by NTRC and Trxs x or f. The in vitro FBPase reduction assay was carried out by incubating a fixed concentration of the purified enzyme (2.5 μM) in the presence of 0.1 mM DTT, with increasing concentrations, as indicated, of NTRC, Trx f1, Trx f2 and Trx x. red, reduced; oxi, oxidized. 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. A 0.6 WT ntrc trxx trxf1f2 ntrc-trxx ntrc-trxf1f2 Y (NPQ) 0.4 0.2 0.0 0 200 400 600 time (s) 800 1000 1200 B 25 ETR (II) 20 15 10 5 0 0 400 200 600 Light intensity C AN (µmol m-2 s-1) 2.0 a 1.5 ac 1.0 ac c 0.5 b 0.0 b -0.5 Figure 4. Light-dependent NPQ, linear photosynthetic electron transport and net CO2 fixation rate in wild type and mutant lines. 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Quantum yields of NPQ (A) and relative linear electron transport rates of photosystem II, ETR (II) (B), were measured in pre-illuminated attached leaves of plants grown at 125 µE m-2 s-1 under long-day conditions. Chlorophyll fluorescence of photosystem II was determined using a pulse-amplitude modulation fluorimeter. Determinations were performed at least five times and each data point is the mean ± SE. White and black bars indicate light and dark periods. C, Net CO2 assimilation rate (AN) was measured using an open gas exchange system in leaves of plants grown during 4 weeks under long-day photoperiod, which were dark-adapted and then illuminated with a PAR of 125 μE m−2 s−1. Six leaves were measured per line and mean mean ± SE are represented. Letters indicate significant differences with the Tukey Test and a confidence interval of 99.9%. 2 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Figure 5. Electron transmission microscopy analysis of chloroplast structure from wild type and mutant lines. Leaves of plants cultured under a 16-h light/8-h dark regime were collected after the first symptoms of bolting. An increase in plastoglobule (white arrowheads) number, size and association is observed in ntrc-trxx and ntrc-trxf1f2 mutant plants as compared to wild-type and single mutant plants. Bars represent 1 µm. c, chloroplasts; cw, cell wall; v, vacuoles; S, starch granules. 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Figure 6. Level of representative chloroplast proteins in wild type and mutant plants. Western blot analysis of the content of representative components of photosynthetic electron transport (D1, Lhcb1, PsaC and Lhca1), ATP synthesis (α-ATPase and γATPase) and carbon assimilation (RBC-L) in the lines under study. Chloroplasts of the indicated lines were isolated from 5-week old long-day grown plants and fractionated into thylakoid and stromal fractions as described in Methods. Protein samples corresponding to thylakoids (0.5 μg of chlorophyll) or stroma (1 μg of protein) were subjected to SDS-PAGE under reducing conditions, transferred to nitrocellulose filters and probed with antibodies against thylakoid (D1, Lhcb1, PsaC, Lhca1, α-ATPase, γATPase) and stromal (RBC-L) proteins. Additional amounts (3x and 1/4x) of wild type extracts were loaded for comparison. The experiment was performed twice with similar results. 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Figure 7. Redox regulation impairment provokes high mortality at the seedling stage. A, Seeds of the wild type and mutant lines, as indicated, were allowed to germinate on soil and representative seedlings at 5, 8 and 11 days after germination (dag) are shown. Bars represent 0.5 cm. For each line, the percentage of seedlings with emerging true leaves (B) and the percentage of seedlings that remained alive (C) at the indicated dag were determined and represented. The experiment was performed twice and means values ± SE from three replicates of each experiment are represented. 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Figure 8. Effect of sucrose on root production from seedlings of the wild type and mutant lines. Seedlings were grown on MS synthetic medium supplemented or not with 0.5% (w/v) sucrose. A, Seedlings of the different lines, as indicated, after 7 days of growth under continuous light (125 μE m-2 s-1). Root growth in the absence (B) or presence (C) of added sucrose was monitored and mean values ± SE from three replicates are represented. 1 Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Parsed Citations Alkhalfioui F, Renard M, Montrichard F (2007) Unique properties of NADP-thioredoxin reductase C in legumes. J Exp Bot 58: 969978 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Allorent G, Osorio S, Vu JL, Falconet D, Jouhet J, Kuntz M, Fernie AR, Lerbs-Mache S, Macherel D, Courtois F, Finazzi G (2015) Adjustments of embryonic photosynthetic activity modulate seed fitness in Arabidopsis thaliana. New Phytol 205: 707-719 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Austin II JR, Frost E, Vidi PA, Kessler F, Staehelin LA (2006) Plastoglobules are lipoprotein subcompartments of the chloroplast that are permanently coupled to thylakoid membranes and contain biosynthetic enzymes. Plant Cell 18: 1693-1703 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Balsera M, Uberegui E, Schürmann P, Buchanan BB (2014) Evolutionary development of redox regulation in chloroplasts. Antioxid Redox Signal 21: 1327-1355 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Ballicora MA, Frueauf JB, Fu Y, Schürmann P, Preiss J (2000) Activation of the potato tuber ADP-glucose pyrophosphorylase by thioredoxin. J Biol Chem 275: 1315-1320 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Buchanan BB, Balmer Y (2005) Redox regulation: a broadening horizon. Annu Rev Plant Biol 56: 187-220 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Carrillo LR, Froehlich JE, Cruz JA, Savage L, Kramer DM (2016) Multi-level regulation of the chloroplast ATP synthase: The chloroplast NADPH thioredoxin reductase C (NTRC) is required for redox modulation specifically under low irradiance. Plant J 87: 654-663 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Cejudo FJ, Ferrández J, Cano B, Puerto-Galán L, Guinea M (2012) The function of the NADPH thioredoxin reductase C-2-Cys peroxiredoxin system in plastid redox regulation and signalling. FEBS Lett 586: 2974-2980 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Collin V, Issakidis-Bourguet E, Marchand C, Hirasawa M, Lancelin JM, Knaff DB, Miginiac-Maslow M (2003) The Arabidopsis plastidial thioredoxins: new functions and new insights into specificity. J Biol Chem 278: 23747-23752 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Collin V, Lamkemeyer P, Miginiac-Maslow M, Hirasawa M, Knaff DB, Dietz KJ, Issakidis-Bourguet E (2004) Characterization of plastidial thioredoxins from Arabidopsis belonging to the new y-type. Plant Physiol 136: 4088-4095 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Couturier J, Chibani K, Jacquot JP, Rouhier N (2013) Cysteine-based redox regulation and signaling in plants. Front Plant Sci 4: 105 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Cséke C, Buchanan BB (1986) Regulation of the formation and utilization of photosynthate in leaves. Biochim Biophys Acta 853: 43-63 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR (2005) Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol 139: 5-17 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. Geigenberger P, Kolbe A, Tiessen A (2005) Redox regulation of carbon storage and partitioning in response to light and sugars. J Exp Bot 56: 1469-1479 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Huang X, Ouyang X, Deng XW (2014) Beyond repression of photomorphogenesis: role switching of COP/DET/FUS in light signaling. Curr Op Plant Biol 21: 96-103 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Ikegami A, Yoshimura N, Motohashi K, Takahashi S, Romano PG, Hisabori T, Takamiya K, Masuda T (2007) The CHLI1 subunit of Arabidopsis thaliana magnesium chelatase is a target protein of the chloroplast thioredoxin. J Biol Chem 282: 19282-19291 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Inaba T, Ito-Inaba Y (2010) Versatile roles of plastids in plant growth and development. Plant Cell Physiol 51: 1847-1853 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Jacquot JP, Eklund H, Rouhier N, Schürmann P (2009) Structural and evolutionary aspects of thioredoxin reductases in photosynthetic organisms. Trends Plant Sci 14: 336-343 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Jarvis P, López-Juez E (2013) Biogenesis and homeostasis of chloroplasts and other plastids. Nat Rev Mol Cell Biol 14: 787-802 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Kircher S, Schopfer P (2012) Photosynthetic sucrose acts as cotyledon-derived long-distance signal to control root growth during early seedling development in Arabidopsis. Proc Natl Acad Sci USA 109: 11217-11221 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Kirchsteiger K, Ferrández J, Pascual MB, González M, Cejudo FJ (2012) NADPH thioredoxin reductase C is localized in plastids of photosynthetic and nonphotosynthetic tissues and is involved in lateral root formation in Arabidopsis. Plant Cell 24: 1534-1548 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Kramer DM, Johnson G, Kiirats O, Edwards GE (2004) New fluorescence parameters for the determination of q(a) redox state and excitation energy fluxes. Photosynth Res 79: 209-218 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Lepistö A, Kangasjärvi S, Luomala EM, Brader G, Sipari N, Keränen M, Keinänen M, Rintamäki E (2009) Chloroplast NADPHthioredoxin reductase interacts with photoperiodic development in Arabidopsis. Plant Physiol 149: 1261-1276 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Lepistö A, Pakula E, Toivola J, Krieger-Liszkay A, Vignols F, Rintamäki E (2013) Deletion of chloroplast NADPH-dependent thioredoxin reductase results in inability to regulate starch synthesis and causes stunted growth under short-day photoperiods. J Exp Bot 64: 3843-3854 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Meyer Y, Belin C, Delorme-Hinoux V, Reichheld JP, Riondet C (2012) Thioredoxin and glutaredoxin systems in plants: molecular mechanisms, crosstalks, and functional significance. Antioxid Redox Signal 17: 1124-1160 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Michalska J, Zauber H, Buchanan BB, Cejudo FJ, Geigenberger P (2009) NTRC links built-in thioredoxin to light and sucrose in regulating starch synthesis in chloroplasts and amyloplasts. Proc Natl Acad Sci USA 106: 9908-9913 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Michelet L, Zaffagnini M, Morisse S, Sparla F, Perez-Perez ME, Francia F, Danon A, Marchand CH, Fermani S, Trost P, Lemaire SD (2013) Redox regulation of the Calvin-Benson cycle: something old, something new. Front Plant Sci 4: 470 Pubmed: Author and Title Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Moon JC, Jang HH, Chae HB, Lee JR, Lee SY, Jung YJ, Shin MR, Lim HS, Chung WS, Yun DJ, Lee KO (2006) The C-type Arabidopsis thioredoxin reductase ANTR-C acts as an electron donor to 2-Cys peroxiredoxins in chloroplasts. Biochem Biophys Res Commun 348: 478-484 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Naranjo B, Díaz-Espejo A, Lindahl M, Cejudo FJ (2016a) Type-f thioredoxins have a role in the short-term activation of carbon metabolism and their loss affects growth under short-day conditions in Arabidopsis thaliana. J Exp Bot 67: 1951-1964 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Naranjo B, Mignee C, Krieger-Liszkay A, Hornero-Méndez D, Gallardo-Guerrero L, Cejudo FJ, Lindahl M (2016b) The chloroplast NADPH thioredoxin reductase C, NTRC, controls non-photochemical quenching of light energy and photosynthetic electron transport in Arabidopsis. Plant Cell Environ 39: 804-822 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Nikkanen L, Toivola J, Rintamäki E (2016) Crosstalk between chloroplast thioredoxin systems in regulation of photosynthesis. Plant Cell Environ 39: 1691-1705 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Okegawa Y, Motohashi K (2015) Chloroplastic thioredoxin m functions as a major regulator of Calvin cycle enzymes during photosynthesis in vivo. Plant J 84: 900-913 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Pérez-Ruiz JM, Guinea M, Puerto-Galán L, Cejudo FJ (2014) NADPH thioredoxin reductase C is involved in redox regulation of the Mg-chelatase I subunit in Arabidopsis thaliana chloroplasts. MolPlant 7: 1252-1255 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Pérez-Ruiz JM, Spinola MC, Kirchsteiger K, Moreno J, Sahrawy M, Cejudo FJ (2006) Rice NTRC is a high-efficiency redox system for chloroplast protection against oxidative damage. Plant Cell 18: 2356-2368 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Pogson BJ, Ganguly D, Albrecht-Borth V (2015) Insights into chloroplast biogenesis and development. Biochim Biophys Acta 1847: 1017-1024 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Porra RJ, Thompson WA, Kriedemann PE (1989) Determination of accurate extintion coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy. Biochim Biophys Acta 975: 384-394 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Pulido P, Spinola MC, Kirchsteiger K, Guinea M, Pascual MB, Sahrawy M, Sandalio LM, Dietz KJ, González M, Cejudo FJ (2010) Functional analysis of the pathways for 2-Cys peroxiredoxin reduction in Arabidopsis thaliana chloroplasts. J Exp Bot 61: 4043-4054 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Richter AS, Peter E, Rothbart M, Schlicke H, Toivola J, Rintamäki E, Grimm B (2013) Posttranslational influence of NADPHdependent thioredoxin reductase C on enzymes in tetrapyrrole synthesis. Plant Physiol 162: 63-73 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Rojas-González JA, Soto-Suárez M, García-Díaz A, Romero-Puertas MC, Sandalio LM, Mérida A, Thormählen I, Geigenberger P, Serrato AJ, Sahrawy M (2015) Disruption of both chloroplastic and cytosolic FBPase genes results in a dwarf phenotype and important starch and metabolite changes in Arabidopsis thaliana. J Exp Bot 66: 2673-2689 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Schürmann P, Buchanan BB (2008) The ferredoxin/thioredoxin system of oxygenic photosynthesis. Antioxid Redox Signal 10: 1235Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved. 1274 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Serrato AJ, Fernández-Trijueque J, Barajas-López JD, Chueca A, Sahrawy M (2013) Plastid thioredoxins: a "one-for-all" redoxsignaling system in plants. Front Plant Sci 4: 463 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Serrato AJ, Pérez-Ruiz JM, Spinola MC, Cejudo FJ (2004) A novel NADPH thioredoxin reductase, localized in the chloroplast, which deficiency causes hypersensitivity to abiotic stress in Arabidopsis thaliana. J Biol Chem 279: 43821-43827 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Serrato AJ, Yubero-Serrano EM, Sandalio LM, Muñoz-Blanco J, Chueca A, Caballero JL, Sahrawy M (2009) cpFBPaseII, a novel redox-independent chloroplastic isoform of fructose-1,6-bisphosphatase. Plant Cell Environ 32: 811-827. Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Spínola MC, Pérez-Ruiz JM, Pulido P, Kirchsteiger K, Guinea M, González M, Cejudo FJ (2008) NTRC new ways of using NADPH in the chloroplast. Physiol Plant 133: 516-524 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Thormählen I, Meitzel T, Groysman J, Ochsner AB, von Roepenack-Lahaye E, Naranjo B, Cejudo FJ, Geigenberger P (2015) Thioredoxin f1 and NADPH-dependent thioredoxin reductase C have overlapping functions in regulating photosynthetic metabolism and plant growth in response to varying light conditions. Plant Physiol 169: 1766-1786 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Thormählen I, Ruber J, von Roepenack-Lahaye E, Ehrlich SM, Massot V, Hummer C, Tezycka J, Issakidis-Bourguet E, Geigenberger P (2013) Inactivation of thioredoxin f1 leads to decreased light activation of ADP-glucose pyrophosphorylase and altered diurnal starch turnover in leaves of Arabidopsis plants. Plant Cell Environ 36: 16-29 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Waters MT, Langdale JA (2009) The making of a chloroplast. EMBO J 28: 2861-2873 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Wu SH (2014) Gene expression regulation in photomorphogenesis from the perspective of the central dogma. Annu Rev Plant Biol 65: 311-333 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Yoshida K, Hara S, Hisabori T (2015) Thioredoxin selectivity for thiol-based redox regulation of target proteins in chloroplasts. J Biol Chem 290: 14278-14288 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Yoshida K, Hisabori T (2016) Two distinct redox cascades cooperatively regulate chloroplast functions and sustain plant viability. Proc Natl Acad Sci USA 113: 3967-3976 Pubmed: Author and Title CrossRef: Author and Title Google Scholar: Author Only Title Only Author and Title Downloaded from on July 31, 2017 - Published by www.plantphysiol.org Copyright © 2017 American Society of Plant Biologists. All rights reserved.
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