Mockup
SmartR Line Graph
Mockup
SmartR: Line Graph Workflow > Fetch Data
Main variable
(Optional)
Subsetting variable
Mockup
SmartR: Line Graph Workflow > Preprocess
(Optional)
Subsetting variable
Main variable
Aggregate Probes
Aggregate Probes
Raw intensity (Linear scale)
Raw intensity (Linear scale)
Perform log2
Perform log10
SmartR: Line Graph Workflow > Run Analysis
Mockup
Main variable
Subsetting variable (Optional)
Calculate relative fold-change from baseline
Use cohorts as subsets
Calculate change from baseline
Use Subsetting variable
Sex
Race
Age
Height
Weight
Display each gene in a separate plot
Display each probe in a separate plot
SmartR TimeLine Analysis
etriks1
http://etriks1.uni.lu/transmart/datasetExplorer
Advanced Workflow
Line Graph
Numerical nodes
Numerical nodes > Plot evenly spaced
Numerical nodes > Plot individuals
High Dim nodes > 1 gene with 2 probes