International Journal of Emerging Technology in Computer Science & Electronics (IJETCSE) ISSN: 0976-1353 Volume 22 Issue 2 – MAY 2016. Plant Leaf Recognition using Neural network classifiers Selvakumari M1, Mrs D. Manohari2 PG Student, St. Joseph’s College of Engineering, Chennai 2 Associate Professor, Department of MCA, St. Joseph’s College of Engineering, Chennai [email protected] 1 Abstract-Shape modeling techniques involve identification of leaf structures and classifying them according to their structure. Moment invariant model deals with rotation, translation and scaling of images for the purpose of identification. Centroid radii model focuses on identifying the shape based on coordinates. This project proposes these two techniques to find out the scientific name and disease classification of leaves which can lead to the leaf being further researched. A neural network (NN) is designed to implement this cause further enhancing the process of classification.This classification can be used in the field of medicine to identify the rare medicinal species of plants. Used by the forest department to classify the plant species and to save the plant species which are at the brink of extinction.A Neural Network is represented by a set of nodes and arrows. Where a node corresponds to a neuron and an arrow corresponds to a connection. An Artificial Neural Network (ANN), often just called a Neural Network (NN), is a mathematical model or computational model based on biological neural networks. It consists of an interconnected group of artificial neuron and processes information. It is classification of normal and abnormal leaf. It is used for medical fields. Keyword: Artificial neural network, Support Vector Machine, Fuzzy logic, Principal components analysis, probabilistic neural network,linear decrement analysis,Independed components analysis. I. INTRODUCTION hape modeling techniques is classify the plant species. India is an agricultural country and about seventy percentage of the population depends on agriculture, where plant leaf diseases widely affect the production of the country. Here this survey provides a brief description on various identification techniques. Disease identification is a tedious task and mostly diseases are seen on the leaves or stems of the plant. 65% population depends on agriculture. The crop losses due to diseases are approximately 10 to 30%. Farmers judge the diseases by their experience but this is not accurate and in a proper way. Sometimes farmers call the experts for detecting the diseases but it is time consuming way. The diseases are mostly on leaves and on stem of plant. The diseases are viral, bacterial, fungal,diseases due to insects,rust, nematodes etc. on plant. It is important task for farmers to find out these diseases as early as possible. The Image RGB characteristic pixel numbering strategies is S broadly connected to farming science, and it has extraordinary point of view particularly in the plant insurance field, which at last prompts crop administration. The purposes for applying image analysis in plants are as follows: To detect the boundaries of the affected area. To identify the Object correctly To find diseased leaf, stem, fruit. To quantify affected area by disease. To determine the color and feature of the affected area As known, plants are very important for human beings. The photosynthesis of plants can maintain the balance of carbon dioxide and oxygen in the atmosphere. At the same time, plants are important resources of food and some products, and they also play a vital role in water conservation, inhibiting desertification and improving climate. However, the plant diseases cause significant reduction in both quality and quantity of agricultural products (Ananthi and Varthini, 2012; Wang et al., 2008; Camargo and Smith, 2009; Arivazhagan et al., 2013). In 1943, in north eastern India, it is estimated that the outbreak of the rice helminthosporiose caused a heavy loss of food grains and death of a million people (Ananthi and Varthini, 2012). In 2007, in Georgia (USA), it is estimated that the plant disease losses was about $539.74 million, about $185 million was spent to control the diseases, and the rest was the value of damage caused by the diseases. So plant disease resistance and management are crucial to the reliable production of food. In fact, about 80% to 90% of disease on the plant is appeared on its leaves. So we interest in the plant leaf rather than whole plant. There are many leaf based plant disease recognition methods (Sabine Bauer et al., 2011; Al-Bashish et al., 2011; AlHiary et al., 2011; Dheebet al. 2010; Arivazhagan et al ., 2013). But, there is not an effective method because of the complexity of color and shape of the disease leaves. In this paper, a disease recognition method is proposed and the major steps of plant disease identification are introduced. A.Identification of plant leaf Leaf shape is a primary tool in plant identification. Descriptions often go into minute detail about general leaf shape, and the shape of the leaf apex and base. . 326 International Journal of Emerging Technology in Computer Science & Electronics (IJETCSE) ISSN: 0976-1353 Volume 22 Issue 2 – MAY 2016. In contrast to contour-based methods, region-based shape recognition techniques have been used in [10] for leaf image classification. A. Plant leaf structure For plant identification purposes, the shape of the leaf margin, leaf tip and leaf base are key features to note. A leaf begins at the lateral or auxiliary budLeaf blade Flattened part of the leaf Petiole Leaf stalk Stipules Leaf-like appendages at the base of the leaf. The various plant leaf images are collected directly from the agricultural field using digital camera. The white background is set to take the flash of each leaf images for better result. In this two different agricultural plant leaves are considered. (i.e.) Bean leaf and Bitter gourd leaf. Fig 1.Plant leaf identification II. RELATED WORK Plants play an important role in our environment .The leaf is represented by local descriptors associated with margin sample points. Within this local description, four multiscale triangle representations: namely the well-known triangle area representation (TAR), the triangle side lengths representation (TSL) and two new representations that we denote triangle Fig oriented angles (TOA) and triangle side lengths and angle 2.Plant leaf structure representation (TSLA). Many methodologies have been proposed to analyze plant leaves Agriculture is the mother of all nations. Research in in an automated fashion. A large percentage of such works utilize shape recognition techniques to model and represent the contour agriculture domain is aimed towards increase the quality and shapes of leaves, however additionally, color and texture of quantity of the product at less expenditure with more profit. The leaves have also been taken into consideration to improve quality of the agricultural product may be degraded due to plant recognition accuracies. One of the earliest works [1] employs diseases. These diseases are caused by pathogens viz.., fungi, geometrical parameters like area, perimeter, maximum length, bacteria and viruses. Therefore, to detect and classify the plant maximum width, elongation to differentiate between four types disease in early stage is a significant task. Farmers require of rice grains, with accuracies around 95%. Use of statistical constant monitoring of experts which might be prohibitively discriminant analysis along with color based clustering and expensive and time consuming. Depending on the applications, neural networks have been used in [2] for classification of a many systems have been proposed to solve or at least to reduce flowered plant and a cactus plant. In [3] the authors use the the problems, by making use of image processing and some Curvature Scale Space (CSS) technique and k-NN classifiers to automatic classification tools. classify chrysanthemum leaves. B. Disadvantages Both color and geometrical features have been reported in [4] to detect weeds in crop fields employing k-NN classifiers. In [5] the Systems are extremely slow and inefficient classification of plant species. authors propose a hierarchical technique of representing leaf shapes by first their polygonal approximations and then It gives high complexity data modeling scheme. introducing more and more local details in subsequent steps. It gives less classification accuracy. Fuzzy logic decision making has been utilized in [6] to detect III. PROPOSED WORK weeds in an agricultural field. In [7] the authors propose a twostep approach of using a shape characterization function called The proposed system implements a leaf recognition algorithm centroid-contour distance curve and the object eccentricity for using easy-to-extract features and high efficient recognition leaf image retrieval. The centroid-contour distance (CCD) curve algorithm. The main improvements are on feature extraction and and eccentricity along with an angle code histogram (ACH) have a neural network classifier approach for leaf recognition. All been used in [8] for plant recognition. The effectiveness of using features are extracted from digital leaf image. It is a simple and fractal dimensions in describing leaf shapes has been explored in computationally efficient method for plant species recognition [9]. 327 International Journal of Emerging Technology in Computer Science & Electronics (IJETCSE) ISSN: 0976-1353 Volume 22 Issue 2 – MAY 2016. using leaf image. The method consists of five major parts. First, images of leaf are acquired with digital camera or scanners. C. Applications A. System architecture Then the user selects the base point of the leaf and a few reference points on the leafblades. Based on these points the leaf shape is extracted from the background and a binary image is produced. After that the leaf is aligned horizontally with its base point on the left of the image. Then several morphological features, such as eccentricity, area, perimeter, major axis, minor axis, equivalent diameter, convex area and extent, are extracted. Used in the field of medicine to identify the rare medicinal species of plants Used by the forest department to classify the plant species Used to save the plant species which are at the brink of extinction B. Preprocessing Pre-processing of images commonly involves removing lowfrequency background noise, normalizing the intensity of the individual particle’s images, removing reflections, and masking portions of images. Image pre-processing is the technique of enhancing data images prior to computational processing. Fig 4.Image pre-processing Image pre-processing typically denotes a processing step transforming a source image into a new image which is fundamentally similar to the source image, but differs in certain aspects, e.g. improved contrast. Fig 3. Overall Architecture Diagram A unique set of features are extracted from the leaves by slicing across the major axis and parallel to the minor axis. Then the feature pointers are normalized by taking the ratio of the slice lengths and leaf lengths (major axis). In the training phase, from a given set of training images (segmented) the texture features are extracted and used to train the system using a probabilistic neural network classifier. In the classification phase, given a test image, the leaf is segmented and the texture features are extracted. B. Advantages: Useful for quick and efficient classification of plant species. Used to identify and save the rare species of plants which are at the brink of extinction. Low complexity data modeling schemes are used. C. Morphological operation Morphological techniques typically probe an image with a small shape or template known as a structuring element. The structuring element is positioned at all possible locations in the image and it is compared with the corresponding neighborhood Dilation, in general, causes objects to dilate or grow in size; erosion causes objects to shrink. The amount and the way that they grow or shrink depend upon the choice of the structuring element. Dilating or eroding without specifying the structural element makes no more sense than trying to low pass filter an image without specifying the filter. • Erosion: The basic effect of the operator on a binary image is to erode away the boundaries of regions of foreground pixels (i.e. white pixels, typically). Thus areas of foreground pixels shrink in size, and holes within those areas become larger of pixels. Morphological operations differ in how they carry out this comparison. 328 • Dilation: The basic effect of the operator on a binary image is to gradually enlarge the boundaries of regions of foreground pixels (i.e. white pixels, typically). Thus International Journal of Emerging Technology in Computer Science & Electronics (IJETCSE) ISSN: 0976-1353 Volume 22 Issue 2 – MAY 2016. areas of foreground pixels grow in size while holes within those regions become smaller. D. Segmentation through ANN method Image segmentation is a processing task that aims to locate different objects and boundaries in the image content. Its goal is to partition an image into multiple segments "sets of pixels" that are more meaningful to analyse. For which, the image is divided into two parts: background and foreground, where the foreground is the interesting objects and the background is the rest of the image. All the pixels in the foreground are similar with respect to a specific characteristic, such as intensity, color, or texture. Image segmentation methods have been classified into numerous approaches: The approaches are threshold Based Image Segmentation, Region Based Image Segmentation, Edge Based Image Segmentation and cluster Based Image Segmentation. E. Feature extraction Feature extraction involves simplifying the amount of resources required to describe a large set of data accurately. In pattern recognition and in image processing, feature extraction is a special form of dimensionality reduction. When the input data to an algorithm is too large to be processed and it is suspected to be notoriously redundant (much data, but not much information) then the input data will be transformed into a reduced representation set of features (also named features vector). Transforming the input data into the set of features is called features extraction. If the features extracted are carefully chosen it is expected that the features set will extract the relevant information from the input data in order to perform the desired task using this reduced representation instead of the full size input. The aim of this phase is to find and extract features that can be used to determine the meaning of a given sample. In our project we are considering color as desired feature. We will convert RGB image in hue saturation and value for getting features. trained using unsupervised learning to produce a lowdimensional (typically two-dimensional), discretized representation of the input space of the training samples, called a map. The Self-Organizing Map is one of the neural network models, based on unsupervised learning (human intervention is needed during the learning). Self-organizing maps are different from other artificial neural networks in the sense that they use a neighbourhood function to preserve the topological properties of the input space. A self-organizing map consists of components called nodes or neurons. Each node has a weight vector of the same dimension as the input data vectors and a position in the map space. The nodes are usually arranged in a two-dimensional regular spacing in a hexagonal or rectangular grid. The self-organizing map describes a mapping from a higher dimensional input space to a lower dimensional map space. The procedure for placing a vector from data space onto the map is to find the node with the smallest distance weight vector to the data space vector. G. Classification of disease The International Classification of Diseases (ICD) is the standard diagnostic tool for epidemiology, health management and clinical purposes. This includes the analysis of the general health situation of population groups. It is classification of disease and finding the disease name and to find the leaves are normal or abnormal. It is identified the leaf shapes. The Back propagation algorithm is supported by many parameters such a Learning rate, Activation function and Momentum. The training and operation of the Back Propagation Neural Network is divided into two categories, Initial is that the feed-forward calculation is used in bothtraining mode and testing mode of neural network. Second, the error back propagation calculations, is used only during Training phase to calculate the error and to update weights oftheneurons. These calculations are explained in the algorithm3of the Appendix A. Fig.5 shows the configuration of backPropagation neural network. The proposed work involves threeLayer back propagation model where three layers are, inputLayer, Hidden layer and output layer. Each neuron is depictedby a circle and every interconnection, with its associatedweight, by an arrow. The neurons labeledb are bias neurons. Fig 5. Multi-layered artificial neural network F. Som pattern recognition method A self-organizing map (SOM) or self-organising feature map (SOFM) is a type of artificial neural network (ANN) that is 329 International Journal of Emerging Technology in Computer Science & Electronics (IJETCSE) ISSN: 0976-1353 Volume 22 Issue 2 – MAY 2016. F. Fuzzy Logic Fuzzy Logic classifiers are classification systems that Make use of fuzzy sets or fuzzy logic which converts real-world data values into membership degrees through the use of the membership functions, so that these rules then can be used for the classification process. This is done by defining “categories” for each one of the attributes. Fig 6.Neural network classifier Fig7. Sample normal and abnormal leaf Support vector machine (SVM) is a non-linear classifier, and is a newer trend in machine learning algorithm. SVM is popularly used in many pattern recognition problems including texture classification. Disease name finding the method is support vector machine. Fuzzy Logic classifiers are finding the disease. Support Vector Machine (SVM) is a supervised learningtechnique used for the aim of classification. SVM will producea hyper plane that separates data points in the space; it also increases the margin between the two data sets. As Fuzzy logic classifier’s has very high speed they are preferable in cases where there is limited precision in the data values or when classification is required in real time. Fuzzy image processing is the collection of all approaches that understand, represent and process the images, their segments and features as fuzzy sets. The strength of each signal and the biases are represented by weights and constants, which are calculated through the training phase. After the inputs are weighted and added, the result is then transformed by a transfer function into the output. The transfer functions used are Sigmoid, hyperbolic tangent functions or a step. Back propagation is a neural network learning algorithm is used in layered feed-forward Artificial Neural Networks. Back propagation is a form of supervised training. A.Artificial neural networks: ANNs are popular machine learning algorithms that are in a wide use in recent years. Multilayer Perception (MLP) is the basic form of ANN that updates the weights through back propagation during the training. There are other variations in neural networks, which are recently, became popular in texture classification. It is very powerful language. B.Principal component analysis Principal components analysis (PCA) tries to describe the important variability in the data in a reduced number of dimensions. Principal component analysis (PCA) is a mathematical procedure that uses orthogonal transformation to convert a set of observations of possibly correlated variables into a set of values of linearly uncorrelated variables called principal components. The number of principal components is less than or equal to the number of original variables. C. Linear decrement analysis Linear decrement analysis (LDA) is texture value extraction. It easily understands the texture and that values, most of used for recognition process. D. Independed components analysis Independed components analysis (ICA) is color value extraction. It is used for recognized and analysis the image color, that is normal and abnormal color and leaf structure, identified in the leaf. F. Support vector machine A Support Vector Machine (SVM) is a discriminative classifier formally defined by a separating hyper plane. In other words, given labeled training data (supervised learning), the algorithm outputs an optimal hyper plane which categorizes new examples. IV. PERFORMANCE ANALYSIS Performance Analysis is a specialist discipline involving systematic observations to enhance performance and improve decision making, primarily delivered through the provision of objective statistical (Data Analysis) and visual feedback (Video Analysis). A performance analysis is presented for the most popular neural network classifier, the multilayer perceptron (MLP). The analysis is performed for a specific class of pattern recognition problems called one-class classifier problems. The criteria used to measure the performance are classification error, computational complexity (measured in terms of the network size), sensitivity to network size selection, and number of training samples required. With regard to the network size it is shown that networks with one hidden layer perform better than those with two hidden layers. Further, a lower bound on the number of nodes in the hidden layer is derived and found to be d+1, where d is the dimension of the data patterns. The optimal number of nodes is shown to be somewhat larger than this (approximately 3d). In 330 International Journal of Emerging Technology in Computer Science & Electronics (IJETCSE) ISSN: 0976-1353 Volume 22 Issue 2 – MAY 2016. addition the network performance is shown to be relatively insensitive to over specification of the network size. A. Performance of the classifiers To evaluate the proposed leaf pant identification model, the performance accuracy of three different classifiers; PNN, ANN method and support vector machine (SVM) are measured. The classification performances are measured by the Recall, Precision and F−measure. FN TP TP Recall FP TP TP Precision True positives (TP) refers to a correct prediction of the classifier. False positives (FP) and False negatives (FN) correspond to the classifier incorrect predicted. And the F−measure is given by: For which, each digital image are segmented by PSO-segmentation; and the HOG features vectors are extracted from these segmented images. Then, three different categories of classifiers; J48, naive bayes and SVM classifier are used to measure the classification performance. To measure the quality of the classified diseased leaf images the performance is analysed by using four parameters, which includes Accuracy (AC), Recall ratio, Precision and F_measure. Fig 8.Accuracy of performance analysis A. Accuracy The accuracy (AC) is the proportion of the total number of predictions that were correct. It is determined using the equation Accuracy (AC) = (1) 𝑎𝑐𝑐𝑢𝑟𝑎𝑐𝑦 = 𝑇𝑝 +𝑇𝑁 𝑇𝑃+𝑇𝑁+𝐹𝑃+𝐹𝑁 D. F- Measure The F-measure computes some average of the information retrieval precision and recall metrics. 2∗𝑝𝑟𝑒𝑐𝑖𝑠𝑖𝑜𝑛 ∗𝑟𝑒𝑐𝑎𝑙𝑙 𝐹𝑀𝑒𝑎𝑠𝑢𝑟𝑒 = ------------(4) 𝑝𝑟𝑒𝑐𝑖𝑠𝑖𝑜𝑛 +𝑟𝑒𝑐𝑎𝑙𝑙 Number of correct classified bitter gourd leaves,fn is number of misclassified bitter gourd leaves. B. Performance evaluation measures In FFNN classification, 58 bean leaf samples are correctly classified and misclassified samples are 5.The correct classification rate for beans samples 92.1%. For bitter gourd, 49 samples are correctly classified out of55. The correct classification for bitter gourd leaves is 89.1%.The overall system classification rate for the above leaf samples are 90.7% and the error rate of the system is 9.3%.Confusion matrix for NN.From, classification of learning vector quantization was explained. In ANN algorithm, 60 bean leaf samples are correctly classified out of 63 samples. The correct classification rate for beans samples 95.1%.For bitter gourd only 7 samples are correctly classified out of 55.The correct classification for bitter gourd leaves is12.7%.The overall system classification rate for the above leaf samples are 56.8.7% and the error rate of the system is43.2%. RBF network correctly classified all diseased bean leaf samples. But in bitter gourd only, 2l leaf samples are correctly classified out of 55. The correct classification rate of bitter gourd leaf samples are 38.2%. The overall system performance of RBF classification is 71.2%. The error rate of RBF classification for the above plant leaf is28.8%.The performance evaluation for the above classification techniques using Accuracy, Recall ratio, Precision and F_measure tabulation is given below. To evaluate the proposed leaf pant identification model, the performance accuracy of support vector machine (SVM) are measured. The classification of leaves Recall true positive and false negative performance. It is identified the leaf texture and color recognition. -------- (1) B. Recall ratio The recall or true positive rate (TP) is the proportion of positive cases that were correctly identified,as calculated using the equation Recall ratio = (2) 𝑇𝑃 𝑝𝑟𝑒𝑐𝑖𝑠𝑖𝑜𝑛 = ----------------- (2) 𝑇𝑃+𝐹𝑃 C. Precision Precision (P) is the proportion of the predicted positive cases that were correct, as calculated using the equation Precision (P) = (3) 𝑇𝑃 𝑟𝑒𝑐𝑎𝑙𝑙 = ----------------------- (3) 𝑇𝑃+𝑇𝑁 Where, True positives (TP) refers to a correct prediction of the classifier. False positives (FP) and False negatives (FN) correspond to the classifier incorrect predicted. C. Experimental Results and Analysis The classification of diseased plant leaves performance of various neural network techniques which have been analyzed for the 118 input leaf images. The performance evaluated for the 331 International Journal of Emerging Technology in Computer Science & Electronics (IJETCSE) ISSN: 0976-1353 Volume 22 Issue 2 – MAY 2016. neural network techniques which have been used in this paper from the confusion matrix of their respective classifier. Shows the confusion matrix for feed forward neural network classification results for 118 input leaf samples. Table 1. Classification of leaves and SVM classifier are used to measure the classification performance. The accuracy measures of the classifiers. Table 2. Accuracy measures of classifiers Methods Accuracy Recall Precision F-measure J48 0.959 Fp rate 0.004 ANN 0.9067 0.9365 0.8939 0.9147 NB 0.821 0.02 0.849 0.821 AVM 0.5677 0.9523 0.5555 0.7017 SVM 0.915 0.01 0.923 0.915 PNN 0.7118 1 0.6494 0.7875 The performance analysis chart reveals that the accuracy of FFNN is higher than others and also the Precision value and F_measure is higher than other algorithms. This indicates the feed forward neural network classification approach is better based on these three parameters. Learning Vector Quantization (LVQ) is a supervised version of vector quantization that can be usedwhen we have labeled input data. In this proposed method the classification techniques are used to classify the diseased plant leaves. Here artificial neural networking (ANN) technique is used. The ANN classification techniques as Feed forward neural network algorithm (FFNN), Learning vector quantizationArtificial neural networks are the very versatiletools and have been widely used to tackle many issues. Feed-forward neural networks (FFNN) is one of thepopular structures among artificial neural network.the neural network algorithm is proposed for diseased plant leaf classification. The neural network techniques such as feed forward neural network(FFNN), learning vector quantization (LVQ) and radial basis function network (RBF) were tested for two different diseased leaf image classifications such as bean and bitter gourd leaves. Classifier TP Rate Precision F.measure 0.959 0.959 The comparison impact of applying Information Entropy Maximization (IEM) discretization. It is clear from Table 6.2 that identification performance of the Naive bayes and SVM classifier is increased to 90.38% and 98.72% respectively. While, the identification speeds for the whole three different classifiers are improved. Concerning to the proposed plant identification model, Figure 3 shows the F-measures of the three classifiers J48, Naive bayes and SVM; after applying PSO segmentation only without any pre-processing. Then, applying Information gain (IG) Feature selection and combining IG feature selection with IEM discritization. The time speed comparision of the three classifiers. V. CONCLUSION The proposed system provides a simple and computationally efficient method for plant species recognition using leaf image. The computer can automatically recognize leaf by transferring the leaf sample to the computer. This proposed system implements a leaf recognition algorithm using easy-to-extract features by using M-I model and C-R model techniques and high efficient recognition algorithm with ANN classifier. Our main improvements are on feature extraction and the classifier. All features are extracted from digital leaf image. To add the leaves, whose images have been clearly attained, to the system and to provide a proper analysis of those leaves. A. Limitation Size of the training set is limited and time consuming. Classification algorithms also has limitation with speed and size, both in training and testing. There are some limitations of extracting ambiguous color pixels from the background of the image. Fig 9. Neural network classification To experiment the proposed plant identification model; first we try to analyse the effect of PSO-segmentation before applying IG feature selection and discritization. For which, each digital image are segmented by PSO-segmentation; and the HOG features vectors are extracted from these segmented images. Then, three different categories of classifiers; J48, naive bayes B. Future work Future work can be developed in hybrid algorithm such as other clustering method and NNS is order to improve the recognition rate of final classification process. Further needed to compute amount of disease preset on leaf. An extension of this work will focus on developing hybrid algorithms such as genetic algorithms and NNs in order to increase the recognition rate of the final classification process underscoring the advantages of hybrid algorithms. REFERENCES [1]. J. Du, D. Huang, X. Wang, and X. 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