Chapter 9 - Lipids and Membranes • Lipids are essential components of all living organisms • Lipids are water insoluble organic compounds • They are hydrophobic (nonpolar) or amphipathic (containing both nonpolar and polar regions) Structural and Functional Diversity of Lipids • Fatty acids - R-COOH (R=hydrocarbon chain) are components of triacylglycerols, glycerophospholipids, sphingolipids • Phospholipids - contain phosphate moieties • Glycosphingolipids - contain both sphingosine and carbohydrate groups • Isoprenoids - (related to the 5 carbon isoprene) include steroids, lipid vitamins and terpenes Structural relationships of major lipid classes Fatty Acids • Fatty acids (FA) differ from one another in: (1) Length of the hydrocarbon tails (2) Degree of unsaturation (double bond) (3) Position of the double bonds in the chain Nomenclature of fatty acids • Most fatty acids have 12 to 20 carbons • Most chains have an even number of carbons (synthesized from two-carbon units) • IUPAC nomenclature: carboxyl carbon is C-1 • Common nomenclature: a,b,g,d,e etc. from C-1 • Carbon farthest from carboxyl is w Structure and nomenclature of fatty acids • Saturated FA - no C-C double bonds • Unsaturated FA - at least one C-C double bond • Monounsaturated FA - only one C-C double bond • Polyunsaturated FA - two or more C-C double bonds Double bonds in fatty acids • Double bonds are generally cis • Position of double bonds indicated by Dn, where n indicates lower numbered carbon of each pair • Shorthand notation example: 20:4D5,8,11,14 (total # carbons : # double bonds, D double bond positions) Structure and nomenclature of fatty acids Fatty acids are stored as triglycerols (triglycerides) Glycerophospholipids • The most abundant lipids in membranes • Possess a glycerol backbone • A phosphate is esterified to both glycerol and another compound bearing an -OH group • Phosphatidates are glycerophospholipids with two fatty acid groups esterified to C-1 and C-2 of glycerol 3-phosphate (a) Glycerol 3-P and (b) phosphatidate O O P O O (a) H2 C CH CH2 O O P O O H2 C OH OH O (b) CH2 CH O O O Glycerol 3-phosphate phosphatidate (R1) (R2) Structures of glycerophospholipids (a) Phosphatidyl ethanolamine (b) Phosphatidyl serine (c) Phosphatidylcholine NH3 CH2 NH3 CH COO CH2 O O P O O H2C O CH2 CH CH2 O O P O O H2 C O O O R1 R2 phosphatidylethanolamine CH3 H3C CH3 N CH2 O CH2 CH CH2 O O P O O H2 C O O O R1 R2 phosphatidylserine O CH2 CH O O O R1 R2 phosphatidylcholine Phospholipases hydrolyze phospholipids Structure of an ethanolamine plasmalogen • Plasmalogens - C-1 hydrocarbon substituent attached by a vinyl ether linkage (not ester linkage) Sphingolipids • Sphingolipids - sphingosine (trans-4-sphingenine) is the backbone (abundant in central nervous system tissues ) • Ceramides - fatty acyl group linked to C-2 of sphingosine by an amide bond • Sphingomyelins - phosphocholine attached to C-1 of ceramide • Structure of a galactocerebroside Steroids • Classified as isoprenoids - related to 5carbon isoprene (found in membranes of eukaryotes) • Steroids contain four fused ring systems: 3six carbon rings (A,B,C) and a 5-carbon D ring • Ring system is nearly planar • Substituents point either down (a) or up (b) Cholesteryl ester Other Biologically Important Lipids • Waxes are nonpolar esters of long-chain fatty acids and long chain monohydroxylic alcohols • Waxes are very water insoluble and high melting • They are widely distributed in nature as protective waterproof coatings on leaves, fruits, animal skin, fur, feathers and exoskeletons Myricyl palmitate, a wax Biological Membranes Are Composed of Lipid Bilayers and Proteins • Biological membranes define the external boundaries of cells and separate cellular compartments • A biological membrane consists of proteins embedded in or associated with a lipid bilayer Several important functions of membranes • Some membranes contain protein pumps for ions or small molecules • Some membranes generate proton gradients for ATP production • Membrane receptors respond to extracellular signals and communicate them to the cell interior Lipid Bilayers • Lipid bilayers are the structural basis for all biological membranes • Noncovalent interactions among lipid molecules make them flexible and self-sealing • Polar head groups contact aqueous medium • Nonpolar tails point toward the interior Membrane lipid and bilayer Fluid Mosaic Model of Biological Membranes • Fluid mosaic model - membrane proteins and lipids can rapidly diffuse laterally or rotate within the bilayer (proteins “float” in a lipid-bilayer sea) • Membranes: ~25-50% lipid and 50-75% proteins • Lipids include phospholipids, glycosphingolipids, cholesterol (in some eukaryotes) • Compositions of biological membranes vary considerably among species and cell types Structure of a typical eukaryotic plasma membrane Lipid Bilayers and Membranes Are Dynamic Structures (a)Lateral diffusion is very rapid (b) Transverse diffusion (flip-flop) is very slow Phase transition of a lipid bilayer • Fluid properties of bilayers depend upon the flexibility of their fatty acid chains Three Classes of Membrane Proteins (1) Integral membrane proteins (or intrinsic proteins or trans-membrane proteins) (2) Peripheral membrane proteins (3) Lipid-anchored membrane proteins Lipid-anchored membrane proteins Membrane Transport • Three types of integral membrane protein transport: (1) Channels and pores (2) Passive transporters (3) Active transporters Table 9.3 Characteristics of membrane transport A. Pores and Channels • Pores and channels are transmembrane proteins with a central passage for ions and small molecules • Solutes of appropriate size, charge, and molecular structure can diffuse down a concentration gradient • Process requires no energy • Rate may approach diffusion-controlled limit Membrane transport through a pore or channel • Central passage allows molecules and ions of certain size, charge and geometry to transverse the membrane B. Passive Transport • Passive transport (facilitated diffusion) does not require an energy source • Protein binds solutes and transports them down a concentration gradient Types of passive transport systems Uniport - transporter carries only a single type of solute Some transporters carry out cotransport of two solutes, either in the same direction (symport) or in opposite directions (antiport) Kinetics of passive transport • Initial rate of transport increases until a maximum is reached (site is saturated) C. Active Transport • Transport requires energy to move a solute up its concentration gradient • Transport of charged molecules or ions may result in a charge gradient across the membrane Types of active transport Primary active transport is powered by a direct source of energy as ATP, light or electron transport Secondary active transport is driven by an ion concentration gradient • Primary active transport protein function • Protein binds specific substrate, conformational change allows molecule or ion to be released on the other side of the membrane Secondary active transport in E. coli • Oxidation of Sred generates a transmembrane proton gradient • Movement of H+ down its gradient drives lactose transport (lactose permease) Secondary active transport in animals: Na+-K+ ATPase • Na+ gradient (Na+-K+ATPase) drives glucose transport VALINOMYCIN
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