Table S4. Numbers of proviruses identified in hydrothermal vent bacterial and archaeal genomes using Prophage Finder (Bose et al, 2006). Organism Aciduliprofundum boonei T469 Archaeoglobus profundus DSM 5631 Archaeoglobus fulgidus DSM 4304 Aquifex aeolicus VF5 Caminibacter mediatlanticus TB2 Deferribacter desulfuricans SSM Ferroglobus placidus DSM 10642 Hyperthermus butylicus DSM 5456 Ignicoccus hospitalis KIN4/I Methanocaldococcus sp. FS406-22 Methanocaldococcus fervens AG86 Methanocaldococcus jannaschii DSM 2661 Methanocaldococcus vulcanius M7 Methanopyrus kandleri AV19 Nanoarchaeum equitans Kin4-M Nautilia profundicola AmH Nitratiruptor sp. SB155-2 Persephonella marina EX-H1 Pyrobaculum aerophilum str. IM2 Pyrococcus abyssi GE5 Pyrococcus furiosus DSM 3638 Pyrococcus horikoshii OT3 Pyrococcus sp NA2 Pyrococcus sp. ST04 Rhodothermus marinus DSM 4252 Staphylothermus marinus F1 Thermus thermophilus HB8 Thermococcus gammatolerans EJ3 Thermococcus kodakarensis KOD1 Thermococcus onnurineus NA1 Thermococcus sibricus MM_739 Thermococcus sp. CL1 Thermotoga neapolitana DSM 4359 Thiomicrospira crunognea XCL 2 Number of predicted prophage 2 2 1 1 0 1 1 0 0 0 0 0 0 0 0 1 4 4 0 1 1 2 2 0 1 0 2 0 0 2 1 2 1 4
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