Supporting Information MECHANICAL DOUBLE LAYER MODEL FOR SACCHAROMYCES CEREVISIAE CELL WALL Ruben Mercadé-Prieto*, Colin R. Thomas and Zhibing Zhang School of Chemical Engineering, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK. * corresponding author: [email protected] (a) Single layer wall with sharp indenter (rind/r = 0.01) 1 (b) Double layer wall with large indenter (rind/r = 1) Fig. S1 Meshing of the single and double layer walls during FEM using (a) sharp or (b) large spherical indenters. For both cases, the total thickness htotal = 0.05. 2 0.004 F/r(Eh)total 0.003 0.002 Empty Hencky Liquid Hencky Empty Green 0.001 Liquid Green 0 0 0.01 0.02 0.03 Fractional deformation 0.04 Fig. S2 Normalized compression force with the total stiffness for AFM-like experiment using a large spherical indenter (rind/r = 1), using the double layer model with hin/r = 0.01, hout/r = 0.04 and Ein / Eout = 500. Simulations were performed using Green and Hencky strains, for empty spheres and for spheres with a liquid core. Insets show the maximum principal Hencky strain after a displacement of the indenter d = htotal = hin + hout (at = 0.025, about 125 nm for a typical yeast cell). 3 0.17 Green's strains rind/r = 1 0.15 kwe / r(Eh)total 0.13 0.11 0.09 hout=0.044; hin=0.004 hout=0.044; hin=0.008 hout=0.044; hin=0.016 hout=0.036; hin=0.004 hout=0.036; hin=0.012 hout=0.036; hin=0.024 0.07 0.05 0.03 1 10 Ein / Eout 100 1000 Fig. S3 Effect of the elastic modulus ratio in a double layer wall on kw calculated at d < hout. The compression was performed using a large spherical indenter (rind/r = 1) for several thickness values of hout and hin using Green’s strains. 4 Effect of turgor pressure on the elastic modulus The effect of an inner or turgor pressure in a core-shell sphere using FEM for the simple case of Green’s strains is explored briefly here. Firstly, for a linear-elastic, incompressible, isotropic and homogeneous wall, membrane theory predicts that the increase of the cell radius from r0 to r due to the existence of an internal pressure P is given by (Kraus 1967) r P E 1 0.25 r0 h0 r0 (S1) This equation was validated here using FEM, as shown in Fig. S4(a). It is important to notice that the swelling of a cell is not determined solely by the turgor pressure, but by the ratio of the pressure to the elastic modulus, i.e. P / E. Hence, it is impossible to study the effect of the turgor pressure on compression if E is not known. In practice, the reverse problem has been considered: r/r0 is determined experimentally at different osmotic pressures, from which an “osmotic” elastic modulus is determined using Eq. S1 or FEM. For yeast it has been shown that the value of E determined in this way is ~100 MPa (Smith et al. 2000). AFM studies commonly do not report r/r0. On the other hand, studies using compression testing with micromanipulation have reported 1 < r/r0 < 1.1 (Chaudhari et al. 2012; Smith et al. 2000; Stenson et al. 2009; Stenson et al. 2011), with a mean turgor pressure of 0.3-0.4 MPa when the cells where suspended in Isoton II solution, i.e. with an external osmotic pressure of 0.8 MPa. Schaber et al. (2010) have reported a turgor pressure of 0.6 ± 0.2 MPa. Considering only the most swollen case of r/r0 ~1.1 and using h0/r0 = 0.05, eq. S1 suggests that P / E < 0.02. The effects of different turgor pressures on sharp indentation (rind/r = 0.01) have been evaluated by FEM using Green strains for simplicity, shown in Fig. S4(b). The spring cell constant kw has been normalized using r and h from Fig. S4(a) or using the unswollen values r0 and h0. When the latter were used, the spring cell constant does not depend greatly on P / E, whereas when the swollen values are used kw/Erh increases with P / E due to the fast decrease of h with P / E (Fig. S4(a)). Therefore, for the P / E values expected for yeast cells (<0.02), the existence of an internal pressure has a negligible effect on the compression force 5 for displacements common in AFM compression (d < h). This was also verified for large spherical indenters (rind/r = 1, results not shown). 1.30 1.0 0.9 1.25 0.8 (a) 0.7 1.20 1.15 0.5 0.4 1.10 h / ho r / ro 0.6 0.3 0.2 1.05 0.1 1.00 0 0.01 0.02 0.03 0.04 0.0 0.05 P/E 0.21 (b) 0.19 kw / Erh 0.17 0.15 kw /Erh 0.13 0.11 kw /Er0h0 0.09 0.07 0 0.01 0.02 0.03 0.04 0.05 P/ E Fig. S4 (a) Increase of the cell radius after the swelling caused by an internal pressure, continuous line is the prediction of eq. S1. As the cell expands, the wall gets thinner; the dashed line is the best fit h/h0 = 1 – 12.25P/E. (b) Effect of the turgor pressure on the calculated cell wall spring constant normalized using the swollen radius and wall thickness (triangles), or using the unswollen values (squares). Simulation conditions h0/r0= 0.04 using an indenter with rind/r0 = 0.01. 6 Normalization factor for double-layer walls compressed at large deformations In the compression of cells using micromanipulation the main mode of deformation is by stretching. For a single layer core-shell sphere, the compression force causing stretching has been reported to be proportional to the cube of the fractional deformation (Lulevich et al. 2004), so that: F 4Erh 3 This assumes a thin wall incapable of supporting bending moments and small deformations. For a double layer system, if it is assumed that the total force is the addition of the stretching resistance of both layers, and considering only the fractional deformation of the external layer for simplicity Fdoublelayer 4r Ehout 3 4r Ehin 3 Then it is predicted the following normalization relationship regardless of the value of Ein and Eout (and also of hin and hout, as bending stresses are assumed negligible) Fdoublelayer r Ehtotal 3 where (Eh)total = (Eh)out + (Eh)in. 7 Reference List Chaudhari RD, Stenson JD, Overton TW, Thomas CR (2012) Effect of bud scars on the mechanical properties of Saccharomyces cerevisiae cell walls. Chem. Eng. Sci. 84:188-196. Kraus, H., 1967. Thin Elastic Shells. Wiley, New York. Lulevich VV, Andrienko D, Vinogradova OI (2004) Elasticity of polyelectrolyte multilayer microcapsules. Journal of Chemical Physics 120:3822-3826. Schaber J, Adrover M, Eriksson E, Pelet S, Petelenz-Kurdziel E, Klein D, Posas F, Goksor M, Peter M, Hohmann S, Klipp E (2010) Biophysical properties of Saccharomyces cerevisiae and their relationship with HOG pathway activation. European Biophysics Journal 39:1547-1556. Smith AE, Moxham KE, Middelberg APJ (2000) Wall material properties of yeast cells. Part II. Analysis. Chem. Eng. Sci. 55:2043-2053. Stenson JD, Thomas CR, Hartley P (2009) Modelling the mechanical properties of yeast cells. Chem. Eng. Sci. 64:1892-1903. Stenson JD, Hartley P, Wang C, Thomas CR (2011) Determining the Mechanical Properties of Yeast Cell Walls. Biotechnol Progress 27:505-512. 8
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