FIGURE S1 Generating starting (unselected) populations for experimental evolution genotype Females white Dahomey WhiteDahomey WhiteDahomey heterozygote female offspring (orange eyes) Df(1)Exel6234 White heterozygote female offspring (orange eyes) Males Df(1)Exel6234 White Female Male Df(1)Exel6234 Y x Df(1)Exel6234 Y x WhiteDahomey Y S1 S2 S3 S4 SPRDeficiency (red eyes) cross to white Dahomey stock males (repeated x 4 generations) Df(1)Exel6234 Y x SPR- population Df(1)Exel6234 Df(1)Exel6234 genotype cross to either SPR- or white male offspring White Y Control population C1 C2 C3 C4 White White Female White Y Male unselected SPR- (redeyed) and control (white-eyed) populations replicate experimental evolution lines FIGURE S2 Creating extra controls for sperm competition experiments: “SPR+ evolved controls” C1 female C1, C2, C3 or C4 White White C2 C3 C4 Female White Y Male Df(1)Exel6234 Y x heterozygote Df(1)Exel6234 White female offspring C1, C2, C3 or C4 White White White Y x heterozygote female offspring Df(1)Exel6234 White C1, C2, C3 or C4 x Df(1)Exel6234 Df(1)Exel6234 C1 C2 C3 C4 SPR+ evolved (control, white-eyed) populations cross to SPR- (unselected, red-eyed) male cross to males from same evolved control line (C1, C2, C3 or C4) repeated x 6 generations Df(1)Exel6234 Y cross to SPR- male offspring from same line and cross Df(1)Exel6234 Y SPR- (red-eyed) flies in SPR+ (control) evolved genetic background Df(1)Exel6234 Df(1)Exel6234 Female Df(1)Exel6234 Y Male ”SPR+ evolved control” populations FIGURE S3 Creating extra controls for sperm competition experiments: “SPR- evolved controls” S1 female S1, S2, S3 or S4 Df(1)Exel6234 White heterozygote Df(1)Exel6234 White female offspring S1, S2, S3 or S4 S2 S3 S4 Df(1)Exel6234 Df(1)Exel6234 Female Df(1)Exel6234 Y Male cross to white Dahomey stock male x WhiteDahomey Y x Df(1)Exel6234 Y x White Y cross to white male offspring from same line and cross White Y white-eyed flies in SPR- evolved genetic background heterozygote female offspring Df(1)Exel6234 White S1, S2, S3 or S4 White White S1 SPR- evolved populations (red eyes) S2 S3 S4 White White Female White Y Male cross to males from same evolved line (S1, S2, S3 or S4) repeated x 6 generations ”SPR- evolved control” populations (white eyed)
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