Using twin designs in social and political psychology Gary Lewis [email protected] A valuable resource… Core questions… • 1. Why isn't everyone the same? • 2. Why are children like their parents? • 3. Why aren't children from the same parents all alike? Variation is (seemingly) ubiquitous… • • • • • • Height Psychiatric conditions Personality Intelligence Social attitudes Ad infinitum? Sources of variation P = phenotypic variation Sources of variation P = phenotypic variation P = A + D/I + C + E + G*E + GEr Sources of variation P = phenotypic variation A = additive genetic effects (e.g. allele ‘i’ + allele ‘j’…+ allele ‘z’) Sources of variation P = phenotypic variation D/I = dominance/epistatic genetic effects Sources of variation P = phenotypic variation C = shared-environment effects (e.g. family environment) Sources of variation P = phenotypic variation E = unique-environment effects (e.g. random events, measurement error) Sources of variation P = phenotypic variation G*E = gene-environment interaction Sources of variation P = phenotypic variation GEr = gene-environment correlation Sources of variation P = phenotypic variation P = A + D/I + C + E + G*E + GEr Decomposing variation • Q: How do we parse these sources of variation into their constituent components? • A: Twin and family studies Monozygotic/identical twins Monozygotic (MZ) twins share 100% of their segregating genes Dizygotic/fraternal twins Dizygotic (DZ) twins share 50% of their (variable) segregating genes Controlling for environment • Environment is (more or less) identical within twin pairs. • i.e. same womb, same parents, same home, etc. Causes of similarity among (reared-together) twins • Identical/Monozygotic (MZ) twins: • A + D/I + C • Fraternal/Dizygotic (DZ) twins: • ½*A + ¼*D + C • Note: E, by definition, is an influences that serves to makes individuals within a twin pair more discordant for a given trait Genetic architectures and implications • Imagine the following trait: • Additive genetic effects entirely explain variation in Trait “A”: What would the pattern of MZ and DZ correlations look like? • • • • Answers: 1. MZr = .50 & DZr = .25? 2. MZr = 1.0 & DZr = .50? 3. MZr = .50 & DZr = .50? Genetic architectures and implications • Imagine the following trait: • Additive genetic effects entirely explain variation in Trait “A”: What would the pattern of MZ and DZ correlations look like? • • • • Answers: 1. MZr = .50 & DZr = .25? 2. MZr = 1.0 & DZr = .50? 3. MZr = .50 & DZr = .50? Genetic architectures and implications • Imagine the following trait: • Shared environment effects entirely explain variation in Trait “A”: What would the pattern of MZ and DZ correlations look like? • • • • Answers: 1. MZr = .50 & DZr = .25? 2. MZr = 1.0 & DZr = .50? 3. MZr = 1.0 & DZr = 1.0? Genetic architectures and implications • Imagine the following trait: • Shared environment effects entirely explain variation in Trait “A”: What would the pattern of MZ and DZ correlations look like? • • • • Answers: 1. MZr = .50 & DZr = .25? 2. MZr = 1.0 & DZr = .50? 3. MZr = 1.0 & DZr = 1.0? Genetic architectures and implications • Imagine the following trait: • Dominance genetic effects entirely explain variation in Trait “A”: What would the pattern of MZ and DZ correlations look like? • • • • Answers: 1. MZr = 1.0 & DZr = .25? 2. MZr = 1.0 & DZr = .50? 3. MZr = 1.0 & DZr = 1.0? Genetic architectures and implications • Imagine the following trait: • Dominance genetic effects entirely explain variation in Trait “A”: What would the pattern of MZ and DZ correlations look like? • • • • Answers: 1. MZr = 1.0 & DZr = .25? 2. MZr = 1.0 & DZr = .50? 3. MZr = 1.0 & DZr = 1.0? Parameter estimation • With only information from MZs and DZs, we can only estimate 3 parameters: • Usually… • ACE, or • ADE • This decision is usually driven by eyeballing MZ vs. DZ correlations: • If MZs are more than twice as similar as DZs, this is evidence for possible dominance effects • In such a case, an ADE model may be fitted Parameter estimation • Falconer’s method: • rmz = A + C • rdz = ½A + C Parameter estimation • • • • Therefore… • A = 2 (rmz – rdz) (i.e. MZs differ from DZs only because of twice the genetic similarity) • C = 2* rdz – rmz • E = 1 – rmz Parameter estimation • • • • • • • • Limitations with this approach: • Doesn’t extend to the multivariate case • Inefficient with missing data • Doesn’t allow formal significance testing (e.g. likelihood ratio test) Parameter estimation • Covariance matrix – model fitting approach • Hypothetical trait: Big 5 “Extraversion” MZ var/covar 1.3 0.8 DZ var/covar 1.2 0.4 1.1 A+C+E A+C A+C+E 1.5 A+C+E 1/2A+C A+C+E Parameter estimation • What if: A = .4; C = .3; and E = .6 ? Observed Expected MZ var/covar 1.3 0.8 DZ var/covar 1.2 0.4 MZ var/covar 1.3 0.7 DZ var/covar 1.3 0.5 1.1 A+C+E A+C A+C+E 1.5 A+C+E 1/2A+C A+C+E 1.3 .4 + .3 + .6 .4 + .3 .4 + .3 + .6 1.3 .4 + .3 + .6 1/2 *.4 + .3 .4 + .3 + .6 Maximum-likelihood estimation • These parameters are then fitted using a likelihood function • The wonders of modern computing * Ronald Fisher! • The fit-function is a measure of how closely the expected variances-covariance matrices (i.e. A, C, and E as specified in the previous slide) match the observed ones Example ACE figure C A .5 .2 E .3 Extraversion Multivariate extension • Just a quick slide to show the MV extension Observed Expected MZ var/covar 1.3 0.8 0.7 DZ var/covar 1.2 0.4 0.2 1.3 0.7 0.6 1.3 0.5 0.3 1.1 0.6 A+C+E A+C 1.3 A+C A+C+E A+C A+C+E 1.5 0.3 A+C+E 1/2A+C 0.13 1/2A+C A+C+E 1/2A+C A+C+E 1.3 0.8 1.3 0.3 .4 + .3 + .6 .4 + .3 1.5 .4 + .3 .4 + .3 + .6 1/2 *.4 + .3 1.4 1/2 *.4 + .3 .4 + .3 + .6 .4 + .3 .4 + .3 + .6 .4 + .3 + .6 1/2 *.4 + .3 .4 + .3 + .6 Core assumptions • Equal environments between twin pairs • E.g. MZs not treated more similarly simply because they are MZs • No GEr • (i) passive (e.g. books), ii) active (e.g. “niche picking”), iii) evocative (e.g. aggression begets punishment) • No G*E • genes controlling sensitivity to the environment • environment controlling gene expression • No assortative mating • No gene-gene interaction Violations of assumptions! • GEr = inflation of A • Because genes lead to environment construction, which in turn influences the phenotype: MZs have more genes in common, so they will thus appear more similar • NB: GEr requires large A and E (i.e. possible GEr doesn’t falsify the existence of A) Violations of assumptions! • • • • G*E = inflation of E • Differential environment (that interacts with genotype) will decrease twin concordances Violations of assumptions! • • • • • • Assortative mating = inflation of C; underestimates A • Because DZ’s will become more concordant due to greater genetic similarity Violations of assumptions! • • • • • • • • Equal environments = (possible) inflation of A • Because MZs are more similar than DZs for more than just genetic reasons • Only critical if the trait in question is related to the EEA violation Violations of assumptions! • Gene-gene interaction = Inflation of A • MZ twins share all possible higher-order gene-gene interactions • DZ twins share 1/4th dominance effects; 1/8th 3-way interactions; 1/16th 4-way interactions… • As such, if epistasis is present MZs may be much more than twice as similar as DZs Assumption-free methods • Possible to use molecular genetic data to estimate heritability without the limiting assumptions of the classical twin design Visscher et al. (2006) PLOS Genetics But are MZs really identical? • MZ twins emerge from a splitting of the zygote = equal DNA? • Not necessarily… • De novo mutations exist (i.e. acquired during the lifespan) Mutation types • Some examples: • Point mutations Mutation types • Some examples: • Insertions Mutation types • What do de novo mutations mean for the twin method? • Always easiest to think of the problem in terms of how mutations will effect MZ and DZ covariances… Mutations: effects on twin model parameterization • If mutations are random… • Outcome: MZs and DZs both become less concordant proportionally • E is increased A quick note on determinism… • Large heritable component ≠ immutable effects • Estimates of genetic influence are specific to the population under study • Environments can (sometimes radically) alter heritability estimates • Q. Would teaching quality effect the heritability of reading ability? If so, in what direction? Teacher ability and genetics of reading Taylor et al. (2010) Teacher quality moderates the genetic effects on early reading, Science. Discussion time… • Qs: • 1. What are the core arguments against the existence of heritable effects on social and political attitudes? • 2. How well do these arguments hold up to scrutiny? • 3. What alternative etiologies of political attitudes explain the data? • 4. How might these heritability estimates look in Syria, Libya, or China?
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