“EVALUATION OF CONVENTIONAL CULTURE METHOD AND RAPID ANTIGEN DETECTION METHOD FOR DIAGNOSIS OF BACTERIAL MENINGITIS IN CHILDREN BELOW FIVE YEARS OF AGE.” DISSERTATION Submitted to the Rajiv Gandhi University of Health Sciences, Bangalore, Karnataka in partial fulfillment of the regulations for the award of M.D degree in Microbiology examination to be held in April 2011. Guide Dr. ASHA B PATIL,M.D. Associate Professor , Department of Microbiology, KIMS, Hubli. Post Graduate Dr. SYEDA FASIHA MOHAMMADI DEPARTMENT OF MICROBIOLOGY KARNATAKA INSTITUTE OF MEDICAL SCIENCES HUBLI-22 2011 RAJIV GANDHI UNIVERSITY OF HEALTH SCIENCES BANGALORE, KARNATAKA DECLARATION BY THE CANDIDATE I, Dr SYEDA FASIHA MOHAMMADI, declare that this dissertation titled “EVALUATION OF CONVENTIONAL CULTURE METHOD AND RAPID ANTIGEN DETECTION METHOD FOR DIAGNOSIS OF BACTERIAL MENINGITIS IN CHILDREN BELOW FIVE YEARS OF AGE” is a bonafide work done by me under the guidance of DR.ASHA B PATIL,M.D., ASSOCIATE PROFESSOR, Department of Microbiology, Karnataka Institute of Medical Sciences, Hubli. This is being submitted to the Rajiv Gandhi University of Health Sciences, Bangalore, Karnataka, in partial fulfillment of regulations for the award of M.D. Degree in Microbiology, examination to be held in April 2011. This dissertation has not been submitted by me on any previous occasion to any Universit y for the award of any degree. Place: Hubli Dr. Syeda Fasiha Mohammadi Date: P.G. in Microbiology, Karnataka Institute of Medical Sciences,Hubli. KARNATAKA INSTITUTE OF MEDICAL SCIENCES HUBLI DEPARTMENT OF MICROBIOLOGY CERTIFICATE BY THE GUIDE This is to certify CONVENTIONAL that the dissertation CULTURE METHOD titled “EVALUATION AND RAPID OF ANTIGEN DETECTION METHOD FOR DIAGNOSIS OF BACTERIAL MENINGITIS IN CHILDREN BELOW FIVE YEARS OF AGE” is a bonafide work done by Dr.Syeda Fasiha Mohammadi, a post graduate student in Microbiology ,under my guidance and supervision. Place:Hubli Date: Dr.Asha B Patil, M . D . Associate Professor, Department of Microbiology, Karnataka Institute of Medical Sciences,Hubli. KARNATAKA INSTITUTE OF MEDICAL SCIENCES, (KIMS) HUBLI. ENDORSEMENT BY THE HOD, PRINCIPAL/HEAD OF THE INSTITUTION. This is to certify CONVENTIONAL that the dissertation CULTURE METHOD titled AND “EVALUATION RAPID OF ANTIGEN DETECTION METHOD FOR DIAGNOSIS OF BACTERIAL MENINGITIS IN CHILDREN BELOW FIVE YEARS OF AGE” is a bonafide research work done by Dr. Syeda Fasiha Mohammadi, a post graduate student in Microbiology, under the guidance and supervision of Dr.Asha B Patil,M.D. Associate Professor, Department of Microbiology, KIMS, Hubli. This is being submitted to the Rajiv Gandhi University of Health Sciences, Bangalore, Karnataka in partial fulfillment of regulations for the award of M.D. Degree in Microbiology examination to be held in April 2011. Dr.Shobha D Nadag ir Dr.U.S.Hangarga Professor & HOD, Principal, Department of Microbiology, Karnataka Institute of Karnataka Institute of Medical Sciences,Hubli. Medical Sciences,Hubli Date: Date: Place: Hubli Place: Hubli KARNATAKA INSTITUTE OF MEDICAL SCIENCES, HUBLI. DEPARTMENT OF MICROBIOLOGY COPYRIGHT DECLARATION BY THE CANDIDATE I hereby declare that the Rajiv Gandhi University of Health Sciences, Karnataka shall have the rights to preserve, use and disseminate this dissertation / thesis in print or electronic format for academic / research purpose. Date: Name: Dr.Syeda Fasiha Mohammadi Place: Hubli Post Graduate student , Department of Microbiology, Karnataka Institute of Medical Sciences,, Hubli. © Rajiv Gandhi University of Health Sciences, Karnataka ACKNOWLEDGEMENT Firstly I thank God for guiding me and giving me the knowledge and wisdom to do this work. I take this opportunity to express my sincere thanks and gratitude to my guide Dr. Asha B Patil, M.D., Associate Professor, department of Microbiology for her guidance, advice, suggestions and enduring patience with my inexperience saw me through the completion of this dissertation work. With deep sense of gratitude I express my sincere thanks to my teacher Dr. Shobha D Nadagir,M.D., Professor & Head, department of Microbiology, KIMS, Hubli for her inspiring guidance, suggestions and advice during the course of my study. I sincerely thank, Dr Mahesh kumar S, Dr Namratha Nandihal , Dr Mythri B A & Dr Pramod N S for their unconditional support and help during my dissertation work. I sincerely thank Dr. T. A. Shepur , Professor and Head Department of Pediatrics , KIMS, Hubli and Dr Devaraj V. Raichur Professor of Pediatrics, Department of Pediatrics, KIMS, Hubli for their support. I also thank Dr Kanchana H, Dr Chennabasappa M and Dr Venkatesh D for their help. It is my immense pleasure to thank my colleagues Dr Abdul Kaleem, Dr Madhusudhan, Dr Mamata K, Dr. Manjunath A Hosamani , Dr Lakshminarayana, Dr Shyamala , Dr Saroja, Dr Asma, Dr Thipperudraswamy and Dr Santhosh for their unconditional support. I am equally grateful to Dr M S Ravindra and Dr Umesh Dixit for all the possible help. I express my sincere thanks to all the technicians who have helped me in doing the study. I express my sincere thanks to Dr M.G. Hiremath, Director, KIMS, Hubli and Dr. U.S.Hangarga, Principal, KIMS, Hubli for permitting me to do this study and to use the institute facilities for the purpose. Above all my whole hearted thanks to my parents and my husband for being the source of constant inspiration and support. Last but not the least, I express my deep sense of gratitude to all my patients and subjects who have co-operated and without whom this study would not have been possible. Place: Hubli Date: Dr. Syeda Fasiha Mohammadi PG in Dept. of Microbiology Karnataka Institute of Medical Sciences Hubli. LIST OF ABBREVIATIONS A.baumannii Acinetobacter baumannii ABM Acute Bacterial Meningitis AST Antibiotic susceptibility testing A Ampicillin Ak Amikacin BBB Blood Brain Barrier Cpm Cefepime Ce Cefotaxime Ca Ceftazidime Ci Ceftriaxone CSF Cerebrospinal fluid C Chloramphenicol C.koseri Citrobacter koseri DS Direct smear E.coli Escherichia coli GBS Group B Streptococcus H.influenzae Haemophilus influenzae K.pneumoniae Klebsiella pneumoniae LAT Latex agglutination test N.meningitidis Neisseria meningitidis Pt Piperacillin-tazobactam P.aeruginosa Pseudomonas aeruginosa S.pneumoniae Streptococcus pneumoniae ABSTRACT Objectives To know the incidence of bacterial meningitis in children below five years of age. To identify the specific etiological agents causing bacterial meningitis in children below five years of age by CSF culture. To detect bacterial antigens in CSF by latex particle agglutination test (LAT) and to compare conventional culture and antigen detection methods. Methods Present study undertaken for a period of one year included 100 CSF samples of clinically suspected meningitis cases in children below 5 years of age. The samples were subjected to cell count, Gram stain, culture and LAT. The organisms isolated in the study were characterized according to standard procedures. Results. Of the 100 cases studied, 31 cases were diagnosed as ABM by Gram stain, culture and latex agglutination test as per WHO criteria. The hospital frequency of ABM was 1.7%, Male to Female ratio was 1.63:1 showing male preponderance .15 (48.38) cases were culture positive. Gram stain was positive in 22(70.96) cases and LAT in 17(54.83) cases. Haemophilus influenzae was the most common causative agent of acute bacterial meningitis followed by S.pneumoniae. Case fatality rate was 45.16%. The sensitivity and specificity of Gram stain was 53.33% and 83.52% , LAT was 66.66% and 87.91% respectively. Interpretation and Conclusion Bacterial meningitis is a medical emergency and early diagnosis and treatment is life saving and reduces chronic morbidity. The simple Gram stain smear of CSF was the most useful single test for identifying bacterial meningitis. LAT was more sensitive compared to conventional Gram stain and Culture technique in identifying the fastidious organisms like H.influenzae, S.pneumoniae and Group B Streptococcus. However, the combination of Gram stain, Culture and LAT proved to be more productive than any of the single tests alone. Keywords: Acute Bacterial Meningitis; Gram stain; Culture; LAT. TABLE OF CONTENTS PAGE NO 1. INTRODUCTION 1 2. AIMS AND OBJECTIVES 3 3. REVIEW OF LITERATURE 4 4. MATERIALS AND METHODS 29 5. OBSERVATION AND RESULTS 32 6. DISCUSSION 51 7. CONCLUSION 57 8. SUMMARY 58 9. BIBLIOGRAPHY 60 10. ANNEXURE 66 ANNEXURE-I : PROFORMA 66 ANNEXURE-II: KEY TO THE MASTER CHART 71 ANNEXURE-III: MASTER CHART 72 LIST OF TABLES Sl.No 1. TABLES Page No. Relationship between Common Bacterial Pathogens and Factors Predisposing to Meningitis. 2. Pathogenic sequence of Bacterial Neurotropism. 3. Empiric therapy for bacterial meningitis in developed and developing countries. 4. Recommendations for Pathogen-specific antimicrobial therapy of children with Bacterial Meningitis. 5. Age and sex distribution of cases. 6. Clinical presentation of cases. 7. Laboratory confirmed cases of ABM as per WHO criteria. 8. CSF Cell count among the laboratory confirmed cases of ABM. 9. Distribution of cases according to age and causative agent among the laboratory confirmed cases of ABM. 10. Etiological agents identified in CSF by various methods. 11. CSF LAT results compared with administration of antibiotics prior to CSF collection among the laboratory confirmed cases of ABM. 12. CSF culture results compared with administration of antibiotics prior to CSF collection among the laboratory confirmed cases of ABM. 13. CSF Gram stain smear results compared with administration of antibiotics prior to CSF collection among the laboratory confirmed cases of ABM. 14. Comparison of CSF Gram stain, Culture and LAT. 15. Accuracy indices of CSF Gram stain against CSF culture as gold standard. 16. Accuracy indices of CSF LAT against CSF Culture as gold standard. 17. Table showing comparison of sensitivity , specificity, PPV& NPV of CSF Gram stain and CSF LAT with culture as gold standard. 18. Resistance pattern of the isolates. 19. Mortality rate among the laboratory confirmed cases of ABM. 20. Comparative studies of male to female ratio. 21. Comparative studies of Cell count in ABM. 22. Comparison of etiological agents isolated/identified in CSF with other studies. 23. Comparative studies of Gram stain in ABM. 24. Comparative studies of culture isolation in ABM. 25. Comparative studies of LAT in ABM 26. .Comparative studies of case fatality rate in ABM. LIST OF FIGURES Sl.No. FIGURE 1. Pathophysiologic cascade in bacterial meningitis. 2. Cerebrospinal fluid 3. Working station tray of latex agglutination test 4. Test card of latex agglutination test 5. Latex agglutinatin test positive for S.pneumoniae antigen. 6. Direct Gram stain smear showing pleomorphic Gram negative bacilli. 7. Chocolate agar with growth of Haemophilus. 8. Culture smear of Haemophilus. 9. Satellitism. 10. AST of Haemophilus. 11. Brain heart infusion broth. 12. Direct Gram stain smear showing Gram positive cocci in pairs. 13. Chocolate agar with growth of S.pneumoniae. 14. Culture smear of S.pneumoniae. 15. Bile solubility test. 16. Optochin sensitivity test. 17. AST of S.pneumoniae. 18. Mac Conkey agar with growth of K.pneumoniae. 19. AST of K.pneumoniae. 20. Mac Conkey agar with growth of E.coli. Page. No. 21. AST of E.coli. 22. Mac Conkey agar with growth of C.koseri. 23. AST of C.koseri. 24. Mac Conkey agar with growth of A.baumannii. 25. AST of A.baumannii. 26. Mac Conkey agar with growth of P.aeruginosa. 27. AST of P.aeruginosa. 28. Age and sex distribution of cases. 29. Laboratory confirmed cases of ABM. 30. Results of CSF Gram stain among the laboratory confirmed cases of ABM. 31. Results of CSF culture among the laboratory confirmed cases of ABM . 32. Results of CSF LAT among the laboratory confirmed cases. 33. Etiological agents identified in CSF by all methods. INTRODUCTION Bacterial meningitis is an acute purulent infection within the subarachnoid space.1 It is an important cause of childhood death and neurological sequelae in countries with limited resources.2 The incidence of this disease varies widely in different parts of the world ranging approximately 3.0 per 1,00,000 population in the united states to as much as 45.8 per 1,00,000 population in northeastern Brazil.3The community incidence of acute bacterial meningitis in India varies from 0.5% to 2.6% .4,5The mortality rate due to ABM remains significantly high in India and other developing countries, ranging from 16-32%.6 Etiology varies in different parts of the world and in different age groups or depending on host immune status. The three organisms commonly associated with ABM in early childhood in western countries are Haemophilus influenzae type b, S. Pneumoniae and Neisseria meningitidis. 4 Clinical diagnosis of meningitis is not easy, because its early clinical manifestations are often not specific, especially in babies and small children. On the other hand even if it is recognized early and prompt treatment is given ,the mortality rate still is high ~30% in children and 20-30% in neonates. In addition ~10% to 20% of cases suffer from neurologic sequelae.7 As a result of emergence of antimicrobial resistance being reported, recommendations for therapy are changing. Laboratory surveillance of isolates is crucial to identify targets for immunization, chart preventive strategies and to help formulate rational empirical treatment for potentially fatal bacterial meningitis.6 Meningitis is a serious emergency in which the microbiological laboratory plays a critical role in the early identification of the causative bacterium and its antibiogram.8 Gram stain of the CSF can provide a rapid preliminary identification of the infective organism, but is liable to misinterpretation particularly in inexperienced hands.9 Isolation of the bacteria is the definite proof of the etiologic role of the organism. However, CSF culture can be negative in case of 1) induction of antimicrobial therapy prior to collection of specimen ; 2)improper collection and transportation; 3) presence of autolytic enzymes. Besides the culture results are available only after two or three days.10 From the middle 70s, simple, fast and cheap methods to identify etiologic agents in purulent meningitis were made available with the development of immunochemical techniques such as latex particle agglutination test [LPAT].11 The LPAT is highly sensitive and specific, simple to perform, no special equipment required, technically easy, results are available in 10 minutes10 and finally no alteration of results by prior antibiotic therapy.12 The present study was undertaken to know the incidence of bacterial meningitis in children below five years of age, to identify the specific etiological agent causing bacterial meningitis in children by CSF culture, to detect bacterial antigen in CSF by latex particle agglutination test and to compare conventional culture method and antigen detection by latex particle agglutination test. AIMS AND OBJECTIVES 1. To know the incidence of bacterial meningitis in children below five years of age. 2. To identify the specific etiological agent causing bacterial meningitis in children below five years of age by CSF culture. 3. To detect bacterial antigens in CSF by latex particle agglutination test. 4. To compare conventional culture method and antigen detection by latex particle agglutination test. REVIEW OF LITERATURE Meningitis is as old as 460 B.C. when Hippocratus described it and recognized the relationship between meningitis and aural infections.13 Pyogenic meningitis has been known from the time of Celsus and Galen(22 B.C.) who described it as one of the entities of phrenitis, the brain disorders.13 Thomas Willis in 1661 described a case of meningitis.13 Vieusseux in 1805 described an outbreak at Geneva and gave the 1st definite knowledge of cerebrospinal fever.14 Rose and Back in 1884 described streptococcal meningitis.13 Weichselbaum of Vienna (1887) published his paper on Gram negative diplococci in cases of acute cerebrospinal meningitis and named it diplococcus cellularis meningitides.14 Weichselbaum (1888) reported 1st case of meningitis due to Klebsiella pneumoniae previously discovered and described by Friedlander in 1882.15 Schere in 1895 recorded 3 cases of Escherichia coli meningitis for the 1st time in infants under 3 months of age.15 Slawyk in 1899 described the 1st case of meningitis due to H. influenza.15 Flexner Simon (1913) an American bacteriologist from Kentucky prepared the anti serum for treatment of cerebrospinal meningitis.16 Whittle H C and Coworkers (1974) were the first to report the use of LAT in the diagnosis of bacterial meningitis in a developing country. They showed that the test was quick, cheap and easy to carry out and commented that LAT was more sensitive than gram stain and culture in diagnosing Hib, Pneumococcal and meningococcal meningitis. 17 Gibson in 1935 isolated Listeria monocytogenes from a fatal case of meningitis.15 Chinchankar N, Mane M, Bhave S, Bavdekar A, Bapat S, Dutta A, et al in their study conducted at KEM hospital Pune (2002)4 found that 1.5% of all hospital admission cases were ABM in less than 5 yrs of age (54 cases). 78% percent were below one year and 52% were under the age of six months. Chief presentation was high fever, refusal of feeds, altered sensorium and seizures. Meningeal signs were present in only 26%. The CSF C-reactive protein was positive in 41%, Gram stain was positive in 67%, LAT was positive in 78% and culture grew causative organisms in 50% of cases. The final etiological diagnoses (as per LAT and /or cultures) were Streptococcus pneumoniae in 39%, Haemophilus influenzae type b in 26% and others in 35%. The others included one case of Neisseria meningitidis and 10 were LAT negative and culture sterile. Blood cultures were positive in 4 (H.influenzae, alphahaemolytic streptococcus, Pseudomonas and S.aureus). Positive blood culture, CSF culture and positive LAT was present only in one patient with H.influenzae infection. Of the 54 patients with ABM 10 (19%) died in hospital within 1-7 days of admission. The study concluded that the etiological diagnosis can be enhanced by LAT and good culture. H. Influenza type b and S. pneumoniae account for more than 60% of ABM in early childhood. Deivanayagam N, Ashok TP, Nedunchelian K, Ahamed SS, and Mala N, in their study at Institute of child health Chennai (1993) 10 observed that of the 114 consecutive CSF samples tested definitive diagnosis was evident in only 55 based on CSF culture and/or LAT. Culture was positive in 12 (22%) cases whereas LAT was able to identify the etiological agents in 46 (84%). Among the organisms identified by LAT, only 3 out of 46 were culture positive, all Streptococcus pneumoniae. The organisms identified by culture were Staphylococcus aureus in 4, Escherichia coli in 1, Klebsiella in 1, Pseudomonas in 1, and Proteus in 1. Ninety percent of H.influenzae b and 67% of S.pneumoniae infections occurred in children below one year of age. Eighty percent of ABM occurred in children below one year of age. Twenty six percent of cases had received antibiotics prior to admission. They found LAT test useful in arriving at etiological diagnosis of ABM rapidly and recommended the use of LAT if Gram stain is negative Of 50 CSF samples tested by Mirdha BR, Gupta U and Bhujwala RA, in their study conducted at AIIMS hospital (1991)18,Gram stain was positive in 13 (26%) cases and 18 (36%) cases were culture positive (N.meningitidis in 4, Streptococcus pneumoniae in 3, H.influenzae in 2 and Staph aureus and Staph albus isolated in 2 each, Klebsiella pneumoniae 1, and E.coli 1, and others 3). In this study LAT was positive in all culture positive cases for pneumococcus, meningococcus and H.influenzae b. LAT detected 12 additional cases when cultures were negative. Using all the three techniques, an etiological diagnosis was made in 30(60%). LAT is an adjunct to conventional techniques in the etiological diagnosis of ABM when other tests fail to identify the agent. It has a high utility in many hospital and health centers without requiring highly trained staff and expensive laboratory. Finlay FO, Witherow H and Rudd PT, in their study conducted at pediatric ward Royal United Hospital, Bath (1995) 19 found that in 48 cases considered in this study from 72 children admitted with bacterial meningitis etiology was confirmed in 28 cases (58%) by LAT, and in 30 cases (63%) by Gram staining and CSF culture was positive in 39 cases (80%).Twenty six children received antibiotics before lumbar puncture and the LAT was positive in 13 cases (50%). The LAT confirmed the etiology in three out of five cases (60%) of S.pneumoniae, 14 out of 15 cases (93%) of H. influenzae, 12 out of 18 cases (67%) of culture positive meningococci and 3 out of 9 cases (33%) where there was clinical diagnosis of meningococcal meningitis and culture was negative. It was felt that LAT is not justified if Gram stain is positive and concluded that LAT may be performed if the Gram stain does not identify an organism. Bhisitkul DH, Hogan AE and Tanz RR in their retrospective chart review study of 146 consecutive patients with bacterial meningitis done at Children’s Memorial Hospital Chicago (1994)20 observed that the CSF LAT was positive in 100 cases (76%) and CSF culture in 131 cases (90%). The CSF gram stain was positive in 93 cases (71%). The causative organisms were H.influenzae B in 89 cases (61%), pneumococci in 28 cases (19%), meningococci in 16 cases (11%), Group B streptococcus in 10 cases (7%), and E.coli in 3 cases (2%). In patients who had received prior antibiotics, the CSF LAT was positive in 87%, the CSF Gram stain in 71% and CSF culture in 75%. Twenty five percent of patients who had prior antibiotic were culture negative but LAT positive. The study indicated the need for CSF LAT is performed whenever the patient has received antibiotic therapy before the CSF culture is obtained. Das BK, Gurubacharya RL, Mishra OP, Mohapatra TM, in their study conducted at Department of Pediatrics, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India (2003)21 studied 30 cases of ABM. Using LAT, an etiological diagnosis could be made in 30 cases (83%). In contrast CSF Gram stain was positive in 13(36%) and culture was positive in 2 (6%) cases. The sensitivity and specificity of LAT test were 83% and 100% respectively. The common etiological organisms were S. pneumoniae, H. influenzae type b and N. meningitidis A. S. pneumoniae was isolated in all age groups while H. influenzae type b was found only in below one year of age. In the study it was observed that LAT was a rapid and superior diagnostic tool as compared to Gram stain and culture. The study recommends LAT as an adjunct laboratory test for rapid etiological diagnosis of ABM. Among the 65 cases included in the study by Surinder K, Bineeta K, Megha M , at Department of Microbiology, Maulana Azad Medical College, New Delhi, India(2007)12,CSF culture was positive in 15 (23.1%). N. meningitidis 4, S.pneumoniae 3, Acinetobacter species 2, E.coli 2, and one each of Staphylococcus aureus, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Group B Streptococcus. Of these 15 cases Gram stain was positive in 11 (73.3%). LAT detected bacterial antigens in 10 (15.4%) cases. This study showed that Gram stained CSF examination is likely to suggest etiological agent and all the samples that were positive on culture or by LAT showed more than 5 to 6 pus cells per high power field on Gram stain smear. The study concluded that LAT can be an adjunct laboratory test in the etiological diagnosis of ABM particularly in pretreated cases. In a study conducted at Department of Neuromicrobiology, NIMHANS, Bangalore, India (2007)6 by Mani R, Pradhan S, Nagarathna S, Wasiulla R, Chandramukhi A, noted that among 385 patients diagnosed as ABM an etiological agent was identified in 284 (73.8%) cases by culture and/or smear and/or LAT. Gram stain was positive in 253 (65.7%) patients and culture yielded growth in 157 (40.8%). S. pneumoniae was the predominant agent accounting for 238 (61.8%) cases, in which 116 were culture positive, 60 detected by Gram stain and 62 by LAT. H. influenzae was detected in 7 (1.8%) both culture and Gram stain positive in 4 and LAT detected additional 3 cases. Meningococcal meningitis was identified in 4 (1%) cases Gram stain was positive in all 4, two were culture positive and other two were detected by LAT. The high yield of pathogens on Gram stain was attributed to routine use of cytospin to concentrate the smear. Smear negative CSF samples with neutrophilic pleocytosis in suspected ABM warrants antigen testing by LAT. The conclusion of the study was antigen testing for pneumococci should be performed first, since it is the most common pathogen causing community acquired ABM. Sahai S, Mahadevan S, Srinivasan S, Kanungo R, in their study conducted at Jawaharlal Institute of Postgraduate Medical Education and Research, Pondicherry India (2001)22 observed that among 100 cases of ABM, organisms were isolated in 35% cases only. Culture negative meningitis accounted for majority of cases. Almost 88% of children with H.influenzae meningitis were below 2 years of age. S.pneumoniae was uniformly distributed in all the age groups. 42% cases had received antibiotics prior to admission. Long duration of pre admission illness, moderate CSF cellular response and good outcome with standard therapy characterized the group of children with culture negative meningitis. Short prediagnostic history was associated with higher mortality irrespective of the organisms. Rao BN, Kashbur IM, Shembesh NM, El-Bargathy SM, in their study conducted at Al-Fateh Children’s Hospital, Al-Arab Medical University, Benghazi (1998)8 concluded that among 77 ABM cases Gram stained smears identified more etiological agents than culture. Culture of CSF was positive in 48 (62.3%) cases while Gram stain was positive in 66 (85.7%). LAT was positive in 41 (53.2%) cases. Among the identified etiological agents, H.influenzae was predominant agent (33.8%) followed by S.pneumoniae (26%) and Klebsiella species (6.5%). Higher proportion of H. influenzae infection was observed in children < 1 year of age. Thus the simple Gram stain combined with the LAT will help give a rapid diagnosis of bacterial meningitis and may indicate the most probable causative organisms in more than 85% (66/77) of cases before culture results are available. Berkley JA, Mwangi I, Ngesta CJ, Mwarumba S, Lowe BS, Marsh K et al in their study conducted at Kilifi District Hospital, Kenya (2001)2,examined 905 CSF samples,among them 45 met the criteria for acute bacterial meningitis. CSF culture was positive in 37 cases- 17 S. pneumoniae, 14 H.influenzae, three non-typhoidal salmonellae, one Pseudomonas aeruginosa, one group A streptococcus and one group B streptococcus. In the eight children with negative CSF culture, LAT identified six organisms, 5 cases of H.influenzae and one case of S.pneumoniae. The other two were seen in Gram stained smears. Overall Gram stain identified 22 (59.5%) of culture positive cases and four culture negative cases (three gram-negative rods and one gram-positive cocci). The sensitivity of LAT for a positive CSF culture of H. influenzae type b or S. pneumoniae was 96.6% (28/29). The study concluded that without reliable laboratory facilities third of ABM cases may be missed and CSF leukocyte counting misses sixth of ABM cases even when done accurately. CSF culture is clearly the ideal but practically not available. Sippel JE, Hider PA, Controni G, Eisenach KD, Hill HR et al in their study conducted at Naval Biosciences Laboratory, Oakland, California and Naval Medical Research Unit No. 3, Cairo, Egypt (1984)23 got the following results: Directigen LAT detected H. influenzae type b antigen in 83% (69 of 83) of the specimens obtained from patients with H. influenzae disease, pneumococcal antigen in 77% (30 of 39) of the specimens from patients with pneumococcal disease, and N. meningitidis antigen in 93% (37 of 40 ) of the specimens from patients with disease caused by N. meningitidis serogroups A and C . If only culture positive specimens are considered, Directigen LAT detected antigen in 86% (57/66) of H.influenzae specimens, 80% (24/30) of the pneumococcal specimens and 91% (20/22) of meningococcal CSF specimen. No false positive reactions were reported with the Directigen reagents. Nonspecific reactions (agglutination with more than one of the four Directigen Latex reagents) were noted with five specimens. The nonspecific reactions were resolved in four of the five specimens by heating (100°C for 3 min). The data in this study demonstrated Directigen meningitis test is sensitive for detection of antigens in cerebrospinal fluid. Hardiono P, Hanifah O, Dalima A, Veronica F in their study conducted at Mangunkusumo hospital, Jakarta, Indonesia (1998)7 noted that among 100 subjects, 16 were enrolled as suspected bacterial meningitis. A final diagnosis of bacterial meningitis was established in 11 patients. Six were culture positive ,2 with H. influenzae and ,1 each with Neisseria meningitidis, Staphylococcus aureus, Klebsiella ozaenae and Escherichia coli. Three of the six had LAT positive ,2 H. influenzae and, 1 N. meningitidis. LAT was negative in two (Klebsiella ozaenae and Staphylococcus aureus) and cross reacted with N. meningitidis in one (E.coli). LAT was negative for all 10 with negative CSF culture. Gram stained smear was positive in only one of the six cases with positive CSF culture and was negative in all 10 cases with negative culture. It was observed in this study that LAT correlated well with culture whereas Gram stain has had low sensitivity, perhaps reflecting deficiencies in technique. The number of children admitted with bacterial meningitis has been declining, perhaps because of early treatment with antibiotics in the community. Bercion R, Bobossi-Seregbe G, Godby JC, Beyam EN, Manirakiza A and Le Faou A in their study conducted at Complexe Pediatrique of Bangui, Central African Republic (2007)24 found that over one year period 417 patients were enrolled as suspected bacterial meningitis who underwent lumbar puncture. One hundred thirty were proven meningitis confirmed when gram stained smear identified bacteria, when CSF culture yielded growth and when antigen was detected in the supernatant of centrifuged CSF. Among these S. pneumoniae was the most common (62 cases 48%) followed by H.influenzae (46 cases 35%) and by N.meningitidis and Salmonella species (8 cases 6% each). Ceyham M, Yildirim I, Balmer P, Borrow R, Dikici B, Turgut M et al in their study conducted in 12 hospitals participating in the study in Turkey(2008)25 noted that over one year period there were 408 children with clinical suspicion of meningitis. Of the 408 cases bacterial meningitis was confirmed by culture, LAT and Polymerase Chain Reaction (PCR) in 243 (59.6%). Culture was positive in 41/243 (17%) cases -23 N.meningitidis, 12 S.pneumoniae and Hib in six cases. LAT detected antigens in 56/243 (23%) cases – 37 N.meningitidis, 10 H.influenzae, and in 9 S. pneumoniae. Blood culture was positive in 12/243 (4.9%) 4 each of N.meningitidis, Hib and S.pneumoniae. Seven of 41 cases with positive CSF culture and 111 of 202 with negative CSF culture had a history of use of antimicrobial agents before lumbar puncture. PCR analysis was by far the most reliable method of confirming bacterial meningitis, accounting for all confirmed cases with 243 positive results. ACUTE BACTERIAL MENINGITIS Meningitis is defined as the inflammation of the membranes that surround the brain and spinal cord.26The overall attack rate for bacterial meningitis is approximately 3.0 cases per 100000 population, although variability based on age ,race and sex is noted.27The three most common meningeal pathogens, Haemophilus influenzae, Neisseria meningitidis, and Streptococcus pneumoniae account for more than 80% of cases.28Approximately 10% of patients with bacterial meningitis die, and 40% have sequelae including hearing impairment and other neurologic sequelae.26 Classification: Meningitis is classified as follows: 1. According to presentation a. Acute meningitis b. Chronic meningitis 2. According to etiology a. Bacterial meningitis b. Viral meningitis c. fungal meningitis 3.According to epidemiology a.Sporadic b. Epidemic1 EPIDEMIOLOGY TABLE -1:Relationship between Common Bacterial Pathogens and Factors Predisposing to Meningitis .28 Predisposing Factor Bacterial Pathogens Age <1 mo Streptococcus agalactiae, Escherichia coli, Listeria monocytogenes, Klebsiella pneumoniae 1–23 mo S. agalactiae, E. coli, Haemophilus influenzae, Streptococcus pneumoniae, Neisseria meningitidis 2–50 yr S. pneumoniae, N. meningitidis >50 yr S. pneumoniae, N. meningitidis, L. monocytogenes, aerobic gram-negative bacilli Immunocompromised state S. pneumoniae, N. meningitidis, L. monocytogenes, aerobic gram-negative bacilli (including Pseudomonas aeruginosa) Basilar skull fracture S. pneumoniae, H. influenzae, group A βhemolytic streptococci Head trauma; postneurosurgery Staphylococcus aureus, Staphylococcus epidermidis, aerobic gram-negative bacilli (including P. aeruginosa) The likely etiologic agents of bacterial meningitis vary according to the age and underlying disease status of the patient.28 Haemophilus influenzae H. influenzae was previously isolated in 45% to 48% of all cases of bacterial meningitis in the United States. The number of cases of H.influenzae type b meningitis since the introduction of vaccination has decreased more than 90%. However, in developing countries, because of vaccine expense, the results are not as dramatic.28In India the incidence of Hib meningitis is reported to be 6%-44%.29,30 The overall mortality rate is 3% to 6%. Most episodes of meningitis previously occurred in infants and children younger than 6 years (peak incidence of 6 to 12 months),with 90% of cases caused by capsular type B strains. Isolation of this organism in older children and adults should suggest the presence of certain underlying conditions, including sinusitis, otitis media, epiglottitis, pneumonia, diabetes mellitus, alcoholism, splenectomy or asplenic states, head trauma with CSF leak, and immune deficiency.28Household contacts of those with H.influenzae type b disease have a two percent risk of developing invasive disease,a relative risk 600 times greater than that for the general population.31 Neisseria meningitidis N. meningitidis most commonly causes meningitis in children and young adults and is associated with an overall mortality rate of 3% to 13%.Meningococci of serogroups B, C, and Y account for most of the endemic disease. Disease caused by serogroups A and C may occur in epidemics; group Y strains may be associated with pneumonia. Respiratory tract infections, with viruses such as influenza virus, may play a role in the pathogenesis of invasive meningococcal disease. Nasopharyngeal carriage of N. meningitidis is an important factor that leads to the development of invasive disease. Patients with deficiencies in the terminal complement components (C5, C6, C7, C8, and perhaps C9), the so-called membrane attack complex, have a markedly increased incidence of neisserial infection although mortality rates in patients with meningococcal disease are lower than those in patients with an intact complement system. An increased risk of invasive meningococcal disease has also been described with dysfunctional properdin. Meningococcal meningitis occurs in approximately 39% of persons with late complement component deficiencies and 6% of those with properdin deficiencies.28The risk of household contacts of those with meningococcal meningitis is 2.2 per thousand per year. This risk is almost 1000 times greater than that for the population as a whole .32Almost half of the cases tend to occur within three days of illness in the index case. The increased risk continues to persist for 2 to 4 weeks.3 Streptococcus pneumoniae S. pneumoniae, the most frequently observed etiologic agent of bacterial meningitis in the United States, now accounts for 47% of the total cases. the mortality rate ranges from 19% to 26%.Of the more than 90 known pneumococcal serotypes, 18 are responsible for 82% of the cases of bacteremic pneumococcal pneumonia, with a close correlation between bacteremic subtypes and those implicated in meningitis. Patients often have contiguous or distant foci of pneumococcal infection such as pneumonia, otitis media, mastoiditis, sinusitis, and endocarditis. Serious infection may be observed in patients with various underlying conditions (e.g., splenectomy or asplenic states, multiple myeloma, hypogammaglobulinemia, alcoholism, malnutrition, chronic liver or renal disease, malignancy, and diabetes mellitus. The pneumococcus is the most common etiologic agent of meningitis in patients who have suffered basilar skull fracture with CSF leak.28 Listeria monocytogenes L. monocytogenes causes 8% of cases of bacterial meningitis in the United States and carries a mortality rate of 15% to 29%.Serotypes 1/2b and 4b have been implicated in up to 80% of meningitis cases caused by this organism. Listerial infection is most common in infants younger than 1 month (up to 10% of cases), adults older than 60 years, alcoholics, cancer patients, those receiving corticosteroid therapy, and immunosuppressed adults. Other predisposing conditions include diabetes mellitus, liver disease, chronic renal disease, collagen-vascular diseases, and conditions associated with iron overload. Recently, Listeria meningitis has been reported in a patient with Crohn’s disease after treatment with infliximab. Listeria meningitis is found infrequently in patients with HIV infection despite its increased incidence in patients with deficiencies in cell-mediated immunity. Adults less than 50 years of age who present with Listeria meningitis should be screened for HIV infection. Meningitis can also occur in previously healthy adults. Outbreaks of Listeria infection have been associated with the consumption of contaminated coleslaw, raw vegetables, milk, and cheese, with sporadic cases traced to contaminated cheese, turkey franks, alfalfa tablets, and processed meats, thus pointing to the intestinal tract as the usual portal of entry.28 Streptococcus agalactiae Group B streptococcus is a common cause of meningitis in neonates,with 52% of all cases in the United States reported during the first month of life overall mortality rate ranges from 7% to 27%.Group B streptococcus has been isolated from the vaginal or rectal cultures of 15% to 35% of asymptomatic pregnant women. Colonization rates do not vary during pregnancy, and carriage may be chronic (40%), transient, or intermittent. The route of delivery does not influence transmission .Most cases of neonatal meningitis are caused by subtype III organisms and occur after the first week of life. Group B streptococcus can also cause meningitis in adults. Risk factors in adults include age greater than 60 years, diabetes mellitus, pregnancy or the postpartum state, cardiac disease, collagen-vascular diseases, malignancy, alcoholism, hepatic failure, renal failure, previous stroke, neurogenic bladder, decubitus ulcers, and corticosteroid therapy; in one review of group B streptococcal meningitis in adults, no underlying illnesses were found in 43% of patients.28 Aerobic Gram-Negative Bacilli Aerobic gram-negative bacilli (e.g., Klebsiella species, Escherichia coli, Serratia marcescens, Pseudomonas aeruginosa, Salmonella species) have become increasingly important as etiologic agents in patients with bacterial meningitis.These agents may be isolated from the CSF of patients after head trauma or neurosurgical procedure and may also be found in neonates, older adults, immunosuppressed patients, and patients with gram-negative septicemia. Some cases have been associated with disseminated strongyloidiasis in the hyperinfection syndrome . In patients with E. coli meningitis, 75% of cases are caused by strains possessing the K1 antigen. Almost half of pregnant women have this organism isolated on rectal culture, and as many as 75% of their infants will be colonized during the first days of life.28 Staphylococci Meningitis caused by Staphylococcus aureus is usually found in early postneurosurgical or post-trauma patients and in those with CSF shunts; other underlying conditions include diabetes mellitus, alcoholism, chronic renal failure requiring hemodialysis, injection drug use, and malignancies.Other sources of community-acquired S. aureus meningitis include patients with sinusitis, osteomyelitis, and pneumonia. Mortality rates have ranged from 14% to 77% in various series. Staphylococcus epidermidis is the most common cause of meningitis in patients with CSF shunts28. Other Bacteria A review of 28 cases of nocardial meningitis revealed predisposing conditions in approximately 75% of patients. Anaerobic meningitis is unusual and is generally associated with contiguous foci of infection , in many cases, more than one organism may be recovered. Enterococci are unusual etiologic agents of bacterial meningitis; most adult patients have underlying illnesses. Despite the frequency with which the viridans streptococci cause bacteremia, they are unusual causes of meningitis. Group A streptococcal meningitis is also unusual, generally seen in association with pharyngitis, otitis media, and sinusitis Diphtheroids, particularly Propionibacterium acnes, have become important etiologic agents of meningitis in patients with CNS shunt infections.28 CHARACTERISTICS OF ORGANISMS ENCOUNTERED IN PYOGENIC MENINGITIS33, 34 Streptococcus pneumoniae: Morphology: Typical gram positive (1 µm. in diameter) lanceolate shaped cocci arranged in pairs with broad ends in apposition. Short chains are often found in specimens (sputum, pus) and young culture. Capsulated – capsule surrounds each pair. In old culture, capsule is usually lost and short chains of more rounded diplococci with gram variable appearance may be obtained. Non-motile and non-sporing. Cultural characteristics: On blood agar, after incubation for 18 hrs, the colonies are small (0.5-1 mm), dome shaped, glistening with an area of narrow zone of green discolouration (αhaemolysis) around them.On further incubation – the colonies become flat with raised edges and central umbonation, so that concentric rings are seen on the surface when viewed from above – draughtsman or carrom coin appearance. Under anaerobic condition growth is better and haemolysis resemble β-haemolytic type due to oxygen labile haemolysin O. Biochemical reaction: Ferment several sugars, forming acid only. Fermentation is tested in Hiss’s serum water or serum agar slopes. Fermentation of inulin. Bile soluble . Sensitive to optochin Catalase and oxidase negative. Virulence Factors: 1. Colonization and Migration a) Protein adhesin b) Secretory IgA protease c) Pneumolysin 2. Tissue destruction a) Teichoic peptidoglycan fragments. b) Pneumolysin c) H2O2 d) Phosphoryl choline 3. Phagocytic survival: a) Capsule b) Pneumolysin Haemophilus influenzae: Haemophilus meaning blood loving They are characterized by their requirement of one or both of two accessory growth factors X and V present in blood. It is the first free living organism whose complete genome has been sequenced. . Morphology: Gram negative, small (1 µm x 0.3 µm) non motile, non sporing bacillus exhibiting considerable pleomorphism. The bacillus has fastidious growth requirements. The accessory growth factors X and V present in blood are essential for growth. Factor X, a heat stable factor is hemin or other porphyrins required for synthesis of chytochrome and other heme enzymes such as catalase and peroxidase involved in aerobic respiration. V factor is a co-enzyme, Nicotinamide adenine dinucleotide (NAD) which acts as a hydrogen acceptor in the metabolism of the cell. Colony: Uncapsulated strains of H. influenzae produce smooth, small and translucent colonies in 24 hrs at 370 C in 5-10% CO2. Capsulated strains form large, more mucoid colonies with a mouse nest odour and are non haemolytic on rabbit or horse blood agar. Satellitism: Colonies of H. influenzae appear large and well developed alongside the streak of Staphylococcus aureus, due to the availability of factor V released by Staphylococcus aureus into the surrounding medium and is termed satellitism. Biochemical reactions: Sugars like glucose and xylose are fermented with acid production, Catalase and oxidase are positive, Nitrates are reduced to Nitrites. 8 biotypes are identified on the basis of Indole production, urease and ornithine decarboxylase activity. Biotype-I is most frequently responsible for meningitis. Antigenic properties: The major antigenic determinant of the capsulated strains is the capsular polysaccharide based on which H. influenzae strains are classified by Pittman into 6 capsular types – a, b, c, d, e and f. Type b is most commonly encountered in meningitis in humans. Type b capsular polysaccharide has unique chemical structure containing the pentose sugar ribose and ribitol, instead of hexoses and hexosamines as in the other 5 serotypes. The capsular PRP antigen of Hib induces IgG, IgM, IgA antibodies which are bactericidal, opsonic and protective. Hib PRP is therefore employed for immunization. Outer membrane protein antigens of Hib have been classified into 13 subtypes and are of epidemiological value. Niesseria meningitidis : Morphology: These are gram negative oval or spherical cocci, 0.6-0.8 µm in size, typically arranged in pairs, with the adjacent sides flattened. They are non motile and fresh isolates are capsulated. Cultural characteristics: Meningococci are fastidious organisms requiring media enriched with blood, serum or ascitic fluid. They are strict aerobes with an optimum temperature of 35-360 C and pH 7.4-7.6. On solid media colonies are small (1 mm diameter) translucent, round, convex, bluish grey with a smooth glistening surface and entire edges. Colonies are typically lenticular in shape, butyrous in consistency and easily emulsifiable. Growth is poor in liquid media showing granular turbidity with no surface growth weak haemolysis occurs on blood agar. Biochemical reactions: They are catalase and oxidase positive. Glucose and maltose are utilised, but not sucrose or lactose, producing acid but no gas. Indole and H2S are not produced, nitrates are not reduced. Antigenic properties: Based on capsular polysaccharide antigens meningococci are classified into 13 serogroups of which Group A, B and C are the most important. Group A > Causes epidemics Group C > Causes localised outbreaks Group B > Causes both epidemics and localised outbreaks Groups 29-E, W-135 and Y frequently cause meningitis. Virulence factors: Surface structures perhaps pili, facilitate attachment to mucosal epithelial cells and invasion to the submucosa. Once in the blood, survival is mediated by production of a polysaccharide capsule. Endotoxin release mediates many of the systemic manifestations of infections such as shock. Enterobacteriaceae: Members of this family exhibit general, morphological and biochemical similarities and are grouped together under a large and complex family: They are non sporing, non acid fast, Gram negative bacilli. They may or may not be capsulated. They are motile by peritrichate flagellae or non-motile. They are aerobic and facultative anaerobic, grow in ordinary media, ferment glucose producing acid and gas or acid only, reduce nitrates to nitrites. Catalase positive and oxidase negative. Escherichia coli : These are gram negative straight rod (1-3 x 0.4-0.7 ųm) arranged singly or in pairs. Motile with peritrichate flagella. Cultural characteristics: aerobe with a temp range of 10-400 C. Colonies are thick, large, greyish white, moist, smooth, opaque or partially translucent discs on ordinary media. On Mac Conkey agar – colonies are bright pink due to lactose fermentation. Biochemical reactions: Glucose, lactose, mannitol, maltose sugars are fermented with production of acid and gas. Four biochemical tests widely employed in the identification of Enterobacteriaceae are the Indole, Methyl red (MR), Vogesproskauer (VP) and Citrate utilisation tests IMViC. E-coli is IMViC + + - - Antigenic structure : Serotyping of E.coli is based on 3 antigens – somatic O, capsular K and flagellar H antigen. The antigenic pattern of a strain is recorded as the member of the particular antigen it carries, as for ex: 0111:K58:H2. Virulence factors: The virulence factors of E.coli as a cause of extra intestinal infections are several including endotoxin, capsule production and pili that mediate attachment to host cells. Envelope K antigens afford protection against phagocytosis and E.coli strains responsible for neonatal meningitis carry K1 envelope antigen. S. agalactiae: Group B streptococcus have been recognized as the leading cause of early and late onset septicemia and meningitis in neonates and as an important cause of invasive infections in elderly or immunocompromised adults. Its ability to survive in the host is to a high degree dependent on its ability to resist phagocytosis. Morphology: Streptococci are gram positive cocci, 0.5-1.0 µm x 1-2µm in size arranged in chains or pairs. Chain formation is most pronounced in broth media. Human pathogen strains of S.agalactiae produce a polysaccharide capsule which appears to confer virulence. Cultural characteristics – Growth occurs on media enriched with blood, serum or a fermentable carbohydrate. It is an aerobe and a facultative anaerobe, growing best at 370C. On blood agar colonies are small (0.5-1 mm), circular, semitransparent, low convex discs with an area of alpha-haemolysis around them. They produce an orange red pigment which presumably is a beta-carotenoid. In liquid media such as glucose or serum broth growth occurs as a granular turbidity with a powdery deposit. No pellicle is formed. Biochemical reactions – The ferment sugars producing acid but no gas. Catalase negative. Not soluble in 10% bile, Hippurate hydrolysis and Camp test positive. Virulence factors Clinical isolates produce a polysaccharide capsule. A total of 9 different capsular serotypes (Ia, Ib, II, III-VIII) has been demonstrated. Although invasive infection may be associated with all the serotypes, strains with serotype III capsule predominate among isolates from neonatal infections. All capsular serotypes are polysaccharides composed of galactose and glucose. Antibodies to the nine capsular serotypes confer type specific protection. Camp factors and Haemolysin Strains of streptococci produce a diffusible substance that completes the lysis of sheep erythrocytes exposed to Sphingomyelinase C such as Staphylococcal β toxin or α toxin of C.perfringens. Its role as a virulence factor is supported by its ability to bind immunoglobulin G and M and has also been referred to as protein B. Haemolysin of S.agalactiae which is considered as virulence factor has been cloned and sequenced, is not related to streptolysins of S.pyogenes. Other factors – S.agalactiae produce several M. like proteins which binds various host proteins, a C5a peptidase and hyaluronidase. GRAM NEGATIVE NON-FERMENTERS Pseudomonas aeruginosa : It is a slender Gram negative bacilli. 1.5-0.3 µm x 0.5 µm, actively motile by a polar flagellum. They are non capsulated. They are ubiquitious, mostly saprophytic, being found in water, soil or other moist environments. Cultural characteristics: It is an obligate aerobe, grows at a wide range of temperature 6-420 C. On ordinary media, they produce large, opaque, irregular colonies with a distinctive, musty, mawkish or earthy smell. On blood agar, they are hemolytic and produce Non-lactose fermenting colonies on Mac Conkey agar. In broth, it forms a dense turbidity with a surface pellicle. Virulence factors: These include exotoxin A, endotoxins, proteolytic enzymes, alginate and pili. Biochemical reactions: Metabolism is oxidative and non fermentative. Glucose is utilised oxidatively forming acid only. IMViC are negative. Catalase and oxidase positive. Acinetobacter: is strictly aerobic, non motile, gram negative cocco bacillary rods that are oxidase negative, nitrate not reduced and do not ferment sugars. They are non motile and 1-1.5µm x 1.5-2.5µm in size. Often appearing in pairs, mimicking neisseriae in appearance. Acinetobacter is subdivided as follows: Glucose oxidising, non haemolytic clinical strains as A.baumannii, Glucose negative, non-hemolytic strain as A. lwoffi and the haemolytic strain as A. hemolyticus. On Blood Agar: Smooth, opaque, raised, creamy colonies. A. baumannii forms pinkish colonies on Mac Conkey medium. Acid without gas is formed in glucose, arabinose, and xylose. Characteristic reaction is the formation of acid in 10% but not 1% lactose. A.lwoffi – Forms yellow colonies on the Mac Conkey medium, does not acidify sugars and some strains are oxidase positive. They are widely distributed in nature, including the hospital environment, may become established as a part of skin and respiratory flora of patients hospitalised for prolonged periods. Entercoccus species: can be found in soil, food, water and as normal flora in animals, birds, insects and humans. In humans and other animals it inhabits the gastrointestinal tract and the genitourinary tract. Enterococcus faecalis is one of the most common bacteria isolated from the gastro-intestinal tract of humans. Morphology: Enterococci may be spherical or oval and arranged in pairs at an angle to each other (like spectacles) and in short chains. They are gram positive and nonmotile. Colony Characteristics: Colonies on blood agar are 1-2 mm in diameter, small, cream or white, smooth, entire and alpha or beta or non-hemolytic. On Mac Conkey agar, they produce tiny deep pink colonies. Virulence factors: Little is known about virulence. Adhesins, cytolysins and other metabolic capabilities may allow these organisms to proliferate as nosocomial pathogens. In addition, enterococci are capable of acquiring and exchanging genes that encode resistance to antimicrobial agents. And multi drug resistance also contributes to proliferation. Biochemical : Enterococci possess several distinctive features that help in their identification from streptococci: Ability to grow in the presence of 40% bile. Salt resistant, grow in the presence of 6.5% NaCl Heat resistant, grow at 450 C. Grow at a pH of 9.6 E. faecalis is identified by its ability to ferment mannitol, sucrose, sorbitol and aesculin. It grows on tellurite blood agar producing black colonies. Listeria monocytogenes: It is widely distributed in nature and has been isolated from a wide range of mammals, birds, fish, ticks and crustacea. It occurs as a saprophyte in soil, water and sewage. Morphology: Listeria monocytogenes is a small, coccoid, gram positive bacillus, with a tendency to occur in chains. Rough forms may be seen as long filaments. It exhibits a characteristic, slow, tumbling motility at 250C and is non motile when grown at 370 C. It is aerophilic or microaerophillic. Cultural characteristics: Growth is improved with 5-10% CO2. Greater success of isolation is achieved if samples are stored in nutrient broth at 40C and subcultures done at weekly intervals for 1-6 months (cold enrichment). Grows best between 300 C and 370 C colonies are non haemolytic on blood agar. Virulence factors: Listeriolysin, a hemolytic and cytotoxic toxin that may allow survival within phagocytes. Biochemical reactions: Listeria monocytogenes ferments glucose, maltose, rhamnose and alpha methyl D-mannoside, producing acid without gas, catalase positive, grows in 0.1% potassium tellurite, 10% salt and at pH 9.6. Many serovars have been recognised. Most human infections are caused by Servovar 1/2a or 1/2b and 4b. Monocytosis is a feature of human listeriosis, hence the name monocytogenes. ***** PATHOGENESIS: The neurotropic potential of the most common bacterial causes of meningitis (S. pneumoniae, H. influenzae, N. meningitidis and E. coli) relates to their ability to evade several host defences.35 TABLE-2: Pathogenic sequence of Bacterial Neurotropism.35 NEUROTROPIC STAGE HOST DEFENCE STRATEGY OF PATHOGEN Colonization or mucosal invasion Secretory Ig A Ig A protease secretion Ciliary activity Ciliostasis Mucosal epithelium Adhesive pili Intravascular survival Complement Polysaccharide capsule Crossing of blood brain barrier Cerebral endothelium Adhesive pili Survival within CSF Poor opsonic activity Bacterial replication In infants and children, many of the organisms that cause meningitis colonize the upper respiratory tract (nasopharynx). Viral infections of the upper respiratory tract commonly precede invasion of the blood stream. Pneumococci, meningococci and Hib all secrete IgA proteases that cleave the proline rich hinge region of IgA rendering it non functional facilitating bacterial attachment to the epithelium. Binding to the epithelium is dependent on the presence of pili on the surface of the bacteria. After mucosal invasion and attachment the pathogen enters blood stream and survives complement mediated host defence by virtue of its capsular polysaccharide. After bacteremia, pathogens penetrate blood brain barrier (BBB) to enter the subarachnoid space – the step that is least understood in the pathogenesis of meningitis. Bacterial penetration of the blood brain barrier is poorly understood, but it appears to be dependent on a sufficient bacterial inoculum (>1000 colony-forming units per millilitres of blood) aided by multiple inflammatory mediators liberated by invading pathogens and the host’s own immune cells. The vulnerable sites of BBB are choroid plexus and cerebral capillaries, surface bacterial proteins facilitate invasion and organisms reach subarachnoid space.26, 35, 36, 37, 38. Meningitis can also develop by direct extension of infection from a paranasal sinus or from the middle ear through the mastoid to the meninges. Severe head trauma with a skull fracture, CSF rhinorrhoea, or both, can lead to meningitis, usually caused by S. pneumoniae. Bacteria can be directly inoculated into the CSF by congenital dural defects (dermal sinus or meningomyelocele), neurosurgical procedures (such as CSF diversion shunts), penetrating wounds, or extension from a suppurative parameningeal focus.26 Once bacteria reach the CSF, they are likely to survive because humoral defences such as immunoglobulin, complement activity and opsonic activity are undetectable in the CSF.35 PATHOPHYSIOLOGY Bacterial meningitis is almost always a systemic disease, with bacteria gaining entry to the CNS through the blood stream.38once the meningeal pathogens have entered the CNS, they replicate rapidly and liberate active cell wall or subcapsular surface components –i.e., lipoteichoic acid and peptidoglycan fragments of grampositive organisms, and lipopolysaccharide of gram-negative organisms. Antibiotics that act on cell walls cause rapid lysis of bacteria, which can initially cause enhanced release of these active bacterial products into the CSF. These potent inflammatory substances can stimulate macrophage-equivalent brain cells (astrocytes and microglia), cerebral capillary endothelia, or both, to produce cytokines such as tumor necrosis factor (TNF), interleukin-1 (IL-1), interleukin-6, interleukin-8, platelet activating factor, nitric oxide, arachidonic acid metabolites (prostaglandin and prostacycline), and macrophage derived proteins. The cytokines activate adhesion promoting receptors on cerebral vascular endothelial cells and leukocytes, attracting neutrophils to these sites.26, 35, 36, 37,38,39,40 Subsequently, leukocytes penetrate the intercellular junctions of the capillary endothelium and release proteolytic products and toxic oxygen radicals. These events result in injury to the vascular endothelium and alteration of BBB permeability. Depending on the potency and duration of the inflammatory stimuli, the alterations in permeability result in penetration of low-molecular-weight serum proteins into CSF and in vasogenic edema. Additionally, large number of leukocytes enters the sub arachnoid space and release toxic substances that contribute to the production of cytotoxic edema. As a result of high protein and cell content, the increased CSF viscosity contributes to generation of interstitial edema. The accumulation of inflammatory cells, protein, and other material within the CSF interferes with functioning of the arachnoid villi and blocks the resorption of CSF from the subarachnoid space. Similarly, the ventriculitis that often accompanies meningitis may occlude the cerebral aqueduct and lead to hydrocephalus, further exacerbating interstitial edema and elevating intracranial pressure. Early and common findings on CT scan in children with bacterial meningitis are ventriculomegaly and enlargement of subarachnoid spaces. All these inflammatory events, if not modulated promptly and effectively, eventually cause alteration of CSF dynamics (brain edema, intracranial hypertension), of brain metabolism, and of cerebrovascular autoregulation (decreased cerebral blood flow).26, 36, 39 Meningitis, sepsis and proinflammatory cytokines accompanying them may induce septic shock and global cerebral hypoperfusion. The purulent exudates, through which arteries and veins pass in the subarachnoid space, may lead to vasospasm and vasculitis with secondary thrombosis, ischemia, and infarction. Occasionally, necrotizing arteritis may induce subarachnoid hemorrhage. Increased intracranial pressure in meningitis induces brain pathologic changes via at least two mechanisms. First, elevation of intracranial pressure reduces cerebral perfusion pressure and can lead to cerebral ischemia. Second if the intracranial pressure rises substantially, as it often does in bacterial meningitis, cerebral herniation may occur. Cerebral herniation is commonly the ultimate cause of death in fatal cases of bacterial meningitis in children.39 Current research focuses on delineating the mechanisms involved in neuronal injury, possibly through the participation of potential mediators such as reactive oxygen and nitrogen substances, excitatory amino acids, metalloproteinase, and cellular apoptosis mediated by caspases. Genetic targeting or pharmacological blockade of these molecular pathways, or both, might prevent the irreversible focal or diffuse brain damage frequently associated with meningitis.26,37 Fig-1: PATHOPHYSIOLOGIC CASCADE IN BACTERIAL MENINGITIS.36 Endothelial damage Pro inflammatory cytokines Permeability of blood brain barrier Vasogenic edema Leukocyte attraction & CSF entrance: meningeal inflammation Interstitial edema ↑ Intra cranial pressure Septic shock and systemic effects of inflammatory cytokines ↓ Global perfusion Neuronal injury Apoptosis Cytotoxic edema Cerebral vasculitis ↓ Cerebral blood flow ischemia Release of excitatory amino acids Clinical features: Infants and children with bacterial meningitis have acute onset of a febrile illness (fever, lethargy, and anorexia), that can be accompanied by meningeal inflammation (nausea, vomiting, headache, photophobia, and nuchal rigidity, apathy and tripod phenomenon) and encephalopathy (altered consciousness, stupor, coma, seizures) and focal neurologic signs.38,41 An antecedent history of upper respiratory infection or gastrointestinal infection with acute rhinitis, cough, vomiting and diarrhoea is often present and the neurologic findings can be overshadowed. Recognizing the point at which an upper respiratory or gastrointestinal infection has evolved into an infection of nervous system is difficult.40The key to an early recognition is to have high index of suspicion of meningitis whenever a child is sick. In young infants the specific signs of meningeal inflammation are often minimal or absent and non specific manifestations such as paradoxical irritability, lethargy and poor feeding may be the early, or even only, findings.3,41,42 Bacterial meningitis (BM) generally presents in two ways, the first pattern is insidious in which the condition develops over several days and the other is acute and sometimes fulminant, in which the features of sepsis and meningitis develop in a few hours. The level of consciousness on admission predicts ultimate morbidity and mortality; comatose patients have a poorer outcome than do patients who are only irritable or lethargic. Children with a preadmission illness of >48 hours do better than those with symptoms for 24 hours or less. Normal consciousness at admission is a good prognostic sign in BM. Occasionally, the first sign of illness is a convulsion that can recur during progression of the disease. Seizures occur in 30% of cases of BM at some stage of their illness.3, 5, 36, 40 On examination, infants have high fever, bulging anterior fontanelle, altered sensorium, hypoactive or hyperactive deep tendon reflexes. Older children exhibit signs of meningeal inflammation Kernig’s (flexing the hips to right angles and then attempting to extend the legs at knees – full extension is impossible in meningitis) and Brudzinski’s signs (elicited by rapidly flexing the neck- immediate flexion of the legs at the hips and knees results). Less commonly frank coma, pupillary changes, cranial nerve dysfunction, or an altered respiratory pattern (e.g., Cheyne-Stokes respirations, sustained hyperventilation, or hypoventilation or apnoea) is noted. Focal neurologic deficits are present in 20% of children with BM. Papilledema is uncommon in ABM.3,40 Cerebral edema and increased intra cranial pressure are the rule in ABM.3 BM may show signs of circulatory failure (e.g., shock, oliguria and hypotension), as a part of systemic nature of the disease. 36,38 Petechial and purpuric eruptions associated with shock like state are usually indicative of meningococcemia, although the rash can be seen less commonly in Haemophilus influenzae b meningitis also. The presence of a chronically draining ear or a history of head trauma with or without skull fracture is most likely to be associated with pneumococcal meningitis.36, 38 Other foci of infection such as otitis media, pneumonia, cellulitis and septic arthritis are present in variable proportion of children. A persistently high level of ADH, despite low serum osmolality, is commonly seen in meningitis and is labelled the Syndrome of Inappropriate ADH secretion (SIADH). This contributes to increased intra cranial pressure and may be partly responsible for seizures and other acute manifestations of meningitis.3 Laboratory methods for diagnosis of bacterial meningitis: Collection and Transport of Clinical Specimens The collection of clinical specimens is important in the isolation and identification of bacterial agents that cause meningitis. It is recommended that clinical specimens be obtained before antimicrobial therapy is begun to avoid loss of viability of the etiological agents. Treatment of the patient, however, should not be delayed while awaiting collection of specimens. CSF and blood should be processed in a bacteriology laboratory as soon as possible.43 Usually, 3 tubes of CSF are collected for chemistry, microbiology, and cytology. If only one tube of fluid is available, it should be given to the microbiology laboratory. If more than one tube (1 ml each) is available, the second or third tube should go to the microbiology laboratory.43 Transport of Clinical Specimens S. pneumoniae, H. influenzae and N. meningitidis are fastidious and fragile bacteria. They are more reliably isolated if the clinical material is examined as soon as possible after collection.43 CSF As soon as the CSF has been collected, it should be transported to the microbiology laboratory, where it should be examined as soon as possible (within one hour from the time of collection) . CSF should not be exposed to sunlight or extreme heat or cold. If N. meningitidis is suspected to be the cause of the illness, and a delay of several hours in processing specimens is anticipated, incubating the CSF (with screw-caps loosened) at 350C in a 5% CO2 atmosphere (or candle-jar) may improve bacterial survival. If sameday transport to the laboratory is not possible, CSF should be inoculated aseptically into a Trans-Isolate (T-I) medium with a syringe and held overnight at, or close to, 350C. T-I is a biphasic medium that is useful for the primary culture of meningococci and other etiological agents of bacterial meningitis from CSF and blood samples. It can be used as a growth medium as well as a holding and transport medium. 43 Inoculation of Primary Culture Media Once the CSF has arrived at the microbiology laboratory, centrifuge it for 20 minutes at 2000 rpm. Draw off the supernatant with a Pasteur pipette. When antigen detection by latex agglutination is planned, save the supernatant. Sediment must be either vigorously vortexed or well mixed. Use one or two drops of sediment to prepare the Gram stain and use 1 drop to streak the primary culture media. Note: If less than 1 ml of CSF is available, do not centrifuge. Use it for the Gram stain and plate it directly.43 The best medium for S. pneumoniae is a Blood agar plate(BAP), which is a trypticase soy agar (TSA) plate containing sheep or horse blood (5%). Human blood is not an acceptable substitute.43 For H. influenzae, a Chocolate agar plate(CAP) supplemented with haemin and a growth supplement such as IsoVitaleX, supplement B, or Vitox should be used. An acceptable alternative to achieve growth of H. influenzae on BAP is cross-streaking the medium with Staphylococcus aureus or applying a filter paper/disk saturated with X and V factors to the surface of the medium, after the medium had been inoculated. H. influenzae forms satellite colonies along the length of the staphylococcal growth or produces a halo of growth around the XV strip/disk. N. meningitidis grows on both BAP and CAP, as will S. pneumoniae. If only one type of plate is available, choose CAP, because all three etiological agents can grow on it. A bacteriological loop is used to streak or thin the bacteria into single colonies. The agar plates should be incubated in a 5% CO2 incubator or candle-jar. A backup broth (e.g. brain heart infusion broth) should be inoculated with some of the pellet and also incubated.[66] When T-I medium was used for transport, after 24 hours of incubation, with a sterile needle and syringe, transfer 100 μl of the liquid portion of T-I onto BAP and CAP, and streak for isolation. Mac Conkey agar is for identification of lactose fermenting and non-lactose fermenting gram negative bacilli.43 Gram Stain A presumptive diagnosis of bacterial meningitis caused by H. influenzae, S. pneumoniae, and N. meningitidis can be made by Gram stain of the CSF sediment or by detection of specific antigens in the CSF by a latex agglutination test. Positive results of either or both tests can provide evidence of infection, even if cultures fail to grow. N. meningitidis may occur intra- or extra-cellularly in the polymorphonuclear leukocytes and will appear as Gram-negative, coffee-bean-shaped diplococci . S. pneumoniae are lanceolate, Gram-positive diplococci sometimes occurring in short chains. H. influenzae are small, pleomorphic Gram-negative rods or coccobacilli with random arrangements .43 T-I Medium (a) After 24 hours of incubation, using a sterile needle and syringe, transfer 100 μl of the liquid portion of T-I onto BAP and CAP, streak the plate, and incubate at 350 C in a CO2 atmosphere for up to 48 hours. (b) Check for purity of the growth by performing Gram stain. (c) If no growth occurs, subculture the T-I medium at 3 days and again at 7 days.43 Macroscopic Examination of Colonies N. meningitidis grows on BAP, but H. influenzae does not. H. influenzae appears as large, flat, colorless-to-grey opaque colonies. No haemolysis or discoloration of the medium is apparent. On BAP, young colonies of N. meningitidis are round, smooth, moist, glistening and convex, with an entire edge. Some colonies appear to coalesce with their neighbours. Growth is greyish and unpigmented. Older cultures become more opaquely grey and sometimes cause the underlying agar to turn dark. Wellseparated colonies can grow from about 1 mm in diameter in 18 hours to as large as 4 mm, with a somewhat undulating edge, after several days . S. pneumoniae appears as small, greyish, moist (sometimes mucoid), watery colonies with a greenish zone of alpha-haemolysis surrounding them on BAP and CAP. Young pneumococcal colonies appear raised, similar to viridans streptococci. However, once the culture ages 24 hours to 48 hours, the colony becomes flattened, and the central portion becomes depressed. Thus, a microscope (30x-50x) or a 3x hand lens can be a useful tool in differentiating pneumococci from alpha-haemolytic viridians streptococci. Presumptive identification can be made on the basis of the growth on BAP and CAP, and on the basis of the microscopic morphology of the organisms .43 Identification of N. meningitidis .Kovac’s Oxidase Test Identification of the N. meningitidis Serogroup Carbohydrate Utilization by N. meningitidis – Cystine Trypticase Agar Method Commercial Identification Kits.43 Identification of S. pneumoniae Susceptibility to Optochin Inulin fermentation Bile Solubility Test Slide Agglutination Test.43 Identification of H. influenzae Identification of the H. influenzae Serotype Identification of X and V Factor Requirements X, V and XV Paper Disks or Strips.43 Enterobacteriaceae Nitrate reduction test Indole production test Citrate utilization test Methyl red test Voges proskauer test Triple sugar iron agar medium Urea hydrolysis test Fermantation of glucose,lactose,sucrose,maltose,arabinose,xylose,mannitol. Lysine and ornithine decarboxylase test Arginine dihydrolase test.34 Bacterial Antigen detection: In the early 1970’s, immuno-diagnostic methods for the detection of bacterial antigens in CSF emerged to fill the need for prompt identification of common agents of Bacterial meningitis. Numerous assays, including counter immunoelectrophoresis, co-agglutination and latex particle agglutination were rapidly developed to serve as adjuncts to routine culture and gram staining. General recommendations and instructions typical for the detection of soluble bacterial antigens are provided here. For best results, test the supernatant of the centrifuged CSF sample as soon as possible. If immediate testing is not possible, the sample can be refrigerated (between 20C and 80C) up to several hours, or frozen at –200C for longer periods. Reagents should be kept refrigerated between 20C and 80C when not in use. Product deterioration occurs at higher temperatures, especially in tropical climates, and test results may become unreliable before the expiration date of the kit. Latex suspensions should never be frozen.43 Latex agglutination test uses the technique of absorbing anti serum for a specific antigen onto latex particles of uniform diameter, generally 0.8 microns. When the sensitised latex particles are placed in a solution such as CSF containing antigen against which the anti-serum is directed, agglutination of the particles occurs and is visible on inspection. Latex agglutination tests require, in addition to the patient specimen, known positive and negative control specimens to be mixed with the sensitized latex particles. In addition, control latex particles which have not been sensitized are added with patient specimen and with negative and positive controls in order to detect non-specific agglutination. 43 ANTIMICROBIAL THERAPY Empiric antimicrobial therapy for bacterial meningitis .45,46 Current international recommendations for empiric therapy according to the age, immunocompetence and country status are given in Table 3. Table -3: Empiric therapy for bacterial meningitis in developed and developing countries. Patient group Immunocompetent children: age < 3 months Likely etiology Developed countries Group B Streptococcus E. coli L. monocytogenes* Antimicrobial choice Developed Developing countries countries ampicillin plus cefotaxime or ceftriaxone ampicilllin +gentamicin Developing countries S. pneumoniae E. coli Immunocompetent children: age > 3 months - 18 years Heamophilus influenza S.pneumoniae N.meningitidis cefotaxime or ampicillin + ceftriaxone ** chloramphenicol Immunodeficient L. Monocytogenes Gram negative Organisms ampicillin plus ceftazidime Neurosurgical problems and head trauma S.aureus Gram negative organisms S. pneumoniae vancomycin plus third generation cephalosporins * In infants age 1-3 months Staphylococcus aureus, H. influenzae, N. meningitidis and Salmonella species also occur in developing countries ** For resistant S. pneumoniae the American Academy of Pediatrics recommends vancomycin plus cefotaxime or ceftriaxone as empiric therapy Table-4:Recommendations for Pathogen-specific antimicrobial therapy of children with Bacterial Meningitis. 37 Bacteria Antibiotic of choice Neisseria meningitidis Penicillin G Other useful antibiotis or Cefotaxime or ceftriaxone ampicillin Haemophilus Cefotaxime influenzae ceftriaxone or Ampicillin, Chloramphenicol Streptococcus pneumoniae S.pneumoniae Penicillin-susceptible (MIC<0.1g/ml) PenicillinG, Cefotaxime or ceftriaxone S.pneumoniae Penicillinintermediate (MIC=0.1-1.0g/ml Cefotaxime S.pneumoniae Penicillin resistant (MIC>1.0 g /ml) Cefotaxime or ceftriaxone plus vancomycin Cefepime or meropenem S.pneumoniae Cephalosporinresistant (MIC>0.5 g /ml) Cefotaxime or ceftriaxone plus vancomycin Meropenem? New fluoroquinolones? Listeria Ampicillin+ Trimethoprim sulfamethoxazole monocytogenes gentamicin ampicillin or Cefepime or meropenem ceftriaxone Streptococus PencillinG agalactiae gentamicin Enterococcus Ampicillin + aminoglycoside Enterobacteriaceae Cefotaxime + Ampicilin + gentamicin Vancomycin or Cefepime or meropenem ceftriaxone Pseudomonas Ceftrazidime + aminoglycoside Cefepime or Meropenem aeruginosa Supportive and adjunctive treatment is equally important: adequate oxygenation, prevention of hypoglycaemia and hyponatraemia, anticonvulsants for seizures, measures to decrease intracranial hypertension and to prevent fluctuation in cerebral blood flow, controlling fever to reduce metabolic demands, maintaining arterial blood pressures within normal limits are crucial measures. Dexamethasone used 0.15mg/kg every 6 h for 4 days for amelioration of meningeal inflammation.36 Prognosis: Prognosis is predicted by many factors: 37 1. Age of patient (increased mortality in neonatal period) 2. Duration and type of illness before effective antibiotic therapy is instituted. 3. Type of causative organism. 4. Member of bacteria or the quantity of active bacterial products in CSF at the time of diagnosis. 5. Intensity of the host’s inflammatory response. 6. Time needed to sterilize CSF culture. Bad prognostic factors include: 47 1. Age less than 3 years. 2. History of partial treatment 3. Presence of coma or convulsions. 4. Pneumococcal meningitis 5. CSF cell count below 1000 cells per cumm VACCINES Antibodies directed against the bacterial capsular components of H.influenzae ,N.meningitides and S.pneumoniae play a major role in development of immunity against these organisms. Immunisation with the Haemophilus ,pneumococcal and meningococcal conjugate vaccines has had a significant impact on the incidence of invasive disease in children caused by these organisms.26 The routine use of conjugate Hib vaccine in children has been associated with a reduction of more than 99% of invasive disease, including meningitis, in developed countries. Rates of Hib disease have been affected modestly in other areas of the world where the vaccine is not routinely available.26 The heptavalent conjugate pneumococcal vaccine, PCV7, was approved for routine use in infants from 2000. Initial clinical trials showed a reduction of more than 90% in invasive pneumococcal infection in children. subsequent clinical studies have confirmed the efficacy of conjugated pneumococcal vaccine in children and a concomitant reduction in the incidence of invasive pneumococcal disease in adults, attributed to reduced circulation of bacteria. Children older than 2 years of age who are at risk of developing invasive pneumococcal disease , such as children with sickle hemoglobinopathy, should receive the conjugate vaccine followed by the 23–valent polysaccharide vaccine. This includes patients with cochlear implants.26 A quadrivalent meningococcal polysaccharide vaccine against serogroups A,C,Y, and W-135 strains is recommended in the united states for high-risk children older than 2 years ,such as children with asplenia or terminal complement deficiencies . In 2000, the Advisory Committee on Immunization Practices recommended that health care providers inform all college students about the risks of meningococcal disease in this population and to make this vaccine available to individuals who want to reduce their risk of meningococcal disease, which is highest in freshmen living in dormitories .Immunogenicity of the vaccines developed against serogroup B meningococci is poor. A major problem of vaccine development of this serogroup is the homology of this bacterium’s capsular polysaccharide with components of human neural tissue. Current research is ongoing to improve the immune response to vaccines designed against this serogroup, which is endemic in North America and Europe. A meningococcal serogroup C conjugate vaccine is routinely being administered in the Unites Kingdom and Canada. The Vaccines and Related Biological Products Advisory Committee of the US Food and Drug Administration voted to recommend licensure of a quadrivalent conjugate meningococcal vaccine(groups A,C,Y, and W135) for protection against invasive meningococcal disease in adolescents and adults age 11 to 55 years. Clinical trials with this vaccine showed modest immunogenicity in infants.26 Maternal immunization with GBS (Streptococus agalactiae) conjugate vaccine may represent a future strategy to reduce neonatal GBS disease. Maternal administration of prophylactic antibiotics has an impact on preventing only early-onset GBS disease. 26 NEED FOR THE STUDY Bacterial meningitis is a serious disease and is potentially associated with a high rate of mortality, risk of chronicity and neurological deficits. Early implementation of appropriate antimicrobial therapy requires prompt identification of the infecting pathogen.12 The production of clinically useful bacteriological report depends on the time it takes for the organism to grow under test and may result in a delay of 18 hours or longer in case of culture .Even after such a delay, cultures may fail to yield growth because of the previous antimicrobial treatment.48 Etiological diagnosis of bacterial meningitis by CSF culture in India, in the best of the laboratories, is achieved only in 25 to 40%. CSF gram stain is also positive only in about 25 to 30%. Hence, tests with shorter turn around time and good sensitivity and specificity are important for early and accurate diagnosis. The latex particle agglutination test is highly sensitive and specific, simple to perform, no special equipment is required, technically easy, results are available in 10 minutes10 and finally there is no alteration of results due to prior antibiotic therapy6. This study is carried out to establish the diagnostic value of latex particle agglutination test for the rapid specific etiological diagnosis of bacterial meningitis. MATERIALS AND METHODS. This prospective study was done in the department of Microbiology, Karnataka Institute Of Medical Sciences hospital , Hubli ,during the period of December-2008 to November-2009. A total of 100 clinically suspected cases of pyogenic meningitis in children below 5 years of age, constituted the study group. Inclusion Criteria: Children below five years of age who were admitted with the clinical suspicion of bacterial meningitis. Exclusion Criteria: Children developing meningitis following head trauma or neurosurgical procedure or children developing meningitis following hospital admission. Specimen Collection CSF samples were collected by paediatricians in NICU and emergency wards on immediate arrival of the case with clinical suspicion of meningitis, prior to administration of antibiotics whenever possible. About 1-2 ml of CSF was collected in sterile container, by lumbar puncture done with all aseptic precautions.49 Informed consent was obtained from the parents for performing Lumbar puncture. Transport Sample was immediately sent to the laboratory and processed without delay on arrival. Samples collected during night hours were kept in the incubator and processed without delay the following day.49 Macroscopic appearance of CSF was observed for volume / turbidity / purulent (pus) and whether blood stained. CSF was alicoted into two sterile test tubes. One of the tubes was centrifuged at 1500 to 3000 x g for 20 minutes and the sediment was used to inoculate culture media first and then direct smear was made for examination by gram stain to prevent contamination. The other tube was used for bacterial antigen detection. Cell count was done from the remaining uncentrifuged CSF.49 Cytological examination Cell count was done by charging the counting chamber with CSF and counting the leucocytes. A film of centrifuged deposit stained by methylene blue was examined for differential count and the predominant cell type found out.49 Culture: The sediment of the centrifuged CSF was inoculated on to the following media: Chocolate agar plate incubated at 370 C in 5-10% CO2. Mac Conkey agar incubated aerobically at 370 C. BHI broth incubated aerobically at 370 C.49 Inoculated primary plates were incubated for 48 to 72 hours. The plates were examined daily for 72 hours before discarding as negative. BHI broth was incubated for 7 days and examined daily for presence of growth or turbidity and was considered negative at the end of 7 days of incubation. Tubes showing turbidity were subcultured on Chocolate agar and Mac Conkey agar . Tubes that remained non turbid were subcultured on the 7th day before discarding. Any growth on the above mentioned media were identified on the basis of their colony morphology, cultural characteristics, Gram stain and biochemical reactions according to standard techniques.34 Antibiotic susceptibility testing was done by standard Kirby bauer disk diffusion method and controls were put up according to CLSI guidelines.50 Direct Smear Smears are made by placing 1 or 2 drops of sediments of CSF on an alcohol rinsed slide, allowing the drop to form a large heap and air dried. Air dried smears were fixed by heating and stained by Gram’s stain and observed for the presence of pus cells and organisms.49 Tests used for the identification of the isolates: 1) Streptococcus pneumoniae: Gram positive cocci in pairs Catalase test-negative Optochin susceptible Bile soluble34 2) Haemophilus influenzae: Gram negative pleomorphic bacilli Oxidase positive Satellitism-positive34 3)EnterobacteriaceaeA)Escherichia coli Indole produced Methyl red test-positive Citrate not utilized Urea not hydrolysed Triple sugar iron agar –acid slant by acid butt with production of gas ,no H2S produced34 B) Klebsiella pneumoniae Indole not produced Methyl red test-negative Citrate utilized as a sole source of carbon Urea hydrolysed Triple sugar iron agar-acid slant by acid butt with production of gas ,no H2S produced34 C) Citrobacter koseri Indole produced Methyl red test-positive Citrate utilized as a sole source of carbon Urea not hydrolysed Triple sugar iron agar-alkaline slant by acid butt with production of gas ,no H2S produced34 4) Pseudomonas aeruginosa: Oxidase positive Hugh and Liefson’s OF medium-oxidative Growth at 420C –positive Denitrification of nitrates and nitrites-positive34 5 )Acinetobacter baumannii: Non-motile Oxidase negative Hugh and Liefson’s OF medium-oxidative 10% lactose-utilised with production of acid34 LATEX PARTICLE AGGLUTINATION TEST CSF samples were tested for bacterial antigen detection using BD DIRECTIGEN MENINGITIS COMBO TEST ,bacterial antigen kit, a latex test to detect antigens of 5 organisms: – E coli K1 antigen – N. meningiditis ABCY or W 135 antigen – Streptococcus pneumoniae antigen – Group B streptococcus antigen – H. influenzae type b antigen Meningococcus group B antigen being structurally and immunologically related to E.Coli K1 antigen is provided as a single test latex reagent and depending on the age of the child, a positive reaction in a neonatal specimen would suggest E.Coli K1 infection and in older children meningococcus group B is a more likely infection and correlating with direct smear examination of CSF. Procedure: CSF is preheated at 1000C in a water bath for 3 minutes, cooled to room temperature and centrifuged to remove the proteinitious material that would cross react with the antigen (to minimize non specific reactions). The supernatant is then used for LAT. Disposable reaction cards containing six separate circles of different test latex reagents are provided with the kit. One drop of (50µl) CSF is placed on the separate circle of the reaction card and one drop of five different test latex reagents are added to the separate circles, mixed thoroughly and rotated on a mechanical rotator at a speed of 100+/-2 rpm for 10 minutes and observed for agglutination. Positive and negative controls and control latex tests supplied by the manufacturer were put up simultaneously. RESULTS This study was taken up in the department of Microbiology, Karnataka Institute of Medical Sciences Hospital, Hubli for a period of one year from Dec-2008 to Nov2009. 100 cases of children below 5 years of age, who presented with signs and symptoms of meningitis,were investigated for laboratory diagnosis of Acute bacterial meningitis. During the study period there were 1743 children aged <5 years admitted to the pediatric ward, of which 100 cases were suspected to have meningitis. After the CSF examination, 31 cases were diagnosed to have bacterial meningitis. Thus the hospital frequency of ABM was 1.7%. TABLE- 5: Age and sex distribution of cases (n=100).[percentage values in parenthesis] AGE MALE FEMALE TOTAL 1-28days 15 (62.50) 9 (37.50) 24(23) 29days-1yr 22 (59.45) 15(40.54) 37(37) 1yr-3yrs 14 (77.77) 4(22.22) 18(18) 3yrs-5yrs 11 (52.38) 10(47.61) 21(21) Total 62 (62) 38 (38) 100 Fig-28: Age and sex distribution of cases 90 77.77 Percentage 80 70 62.5 59.45 60 52.38 47.61 50 37.5 40 40.54 male 30 female 22.22 20 10 0 1-28days 29d-1yr 1-3yr 3-5yrs Age group In the present study, of the 100 cases, 62(62%) were male and 38(38%) were female , making a male to female ratio of 1.63:1. 61(61%) children were below one year of age ,of which 24(24%) were neonates. About 21 (21%) cases were in the age group of 3yrs-5yrs and 19(19%) were between 1yr -3yrs of age. TABLE-6: Clinical presentation of cases.(n=100).[Percentage values in parenthesis] Clinical feature NO.of cases Fever 88(88%) Seizure 70(70%) Altered sensorium 56(56%) Refusal of feeds 37(37%) Vomiting 36(36%) Meningeal signs 16(16%) Fever was the predominant symptom , seen in 88(88%) cases, followed by seizure in 70(70%), altered sensorium in 56(56%) and vomiting in 36(36%) cases. Signs of meningeal irritation were present only in 16(16%) cases. TABLE-7: Laboratory confirmed cases of ABM as per WHO criteria (n=31). Tests No.of cases positive Gram stain+LAT+Culture 3(9.67%) Gram stain+LAT 9(29.03%) Gram stain+Culture 5(16.12%) Culture+LAT 3(9.67%) Only Gram stain 5(16.12%) Only Culture 4(12.90%) Only LAT 2(6.45%) Total 31 Fig-29:Laboratory confirmed cases of ABM 6.45 9.67 12.9 GS+LAT+CULTURE GS+LAT 29.03 16.12 GS+CULTURE CULTURE+LAT ONLY GS ONLY CULTURE ONLY LAT 9.67 16.12 GS=Gram stain, LAT=Latex particle agglutination test. As per WHO criteria 51, 31(31%) cases were laboratory confirmed as cases of Acute Bacterial Meningitis. TABLE-8: CSF Cell count among the laboratory confirmed cases of ABM (n=31). CSF cell count/mm3 Total 6 – 50 12 (38.70%) 51 – 500 15 (48.38%) 501 – 1000 02 (6.45%) >1000 02 (6.45%) Total 31 CSF cell count was most commonly in the range of 51-500 cells /cumm i.e. in 15 (48.38%) cases, 12(38.70%) cases were in the range of 6-50 cells/cumm, 2(6.45%) were in the range of 501-1000 cells/cumm and 2(6.45%) cases had a cell count of > 1000 cells /cumm. TABLE-9: Distribution of cases according to age and causative agent among the laboratory confirmed cases of ABM (n=31). [percentage values in parenthesis] Etiological 1d-28d(%) 28d-1yr(%) agent 1yr- 3yrs- 3yrs(%) 5yrs(%) Total(%) H.influenzae 3(33.33%) 6(66.66%) - - 9(29.03%) S.pneumoniae - 1(14.28%) 2(28.57%) 4(57.14%) 7(22.58%) GBS - 2(100%) - - 2(6.45%) K.pneumoniae 1(33.33) 1(33.33%) - 1(33.33%) 3(9.67%) E. coli 1(50%) 1(50%) - - 2(6.45%) C. koseri - - 1(100%) - 1(3.22%) A. baumannii 1(100%) - - - 1(3.22%) P. aeruginosa 1(100%) - - - 1(3.22%) Species 3(60%) 1(20%) 1(20%) - 5(16.12%) 4(12.90%) 5(16.12%) 31(100%) Unidentified Total 10(32.25%) 12(38.70%) Species Unidentified=only gram stain positive, GBS=Group B Streptococcus. Haemophilus influenzae was common in children less than 1 year of age and S. pneumoniae was most common in children more than 1 year of age. 2 cases of Group B streptococcus were above 28 days of age. Fig-30: Results of CSF Gram stain among the laboratory confirmed cases of ABM GPC in pairs 8(25.80%) no micro organisms 9(29.03%) GPC in chains 1(3.22%) Gram negative bacilli 13(41.93%) GPC=Gram positive cocci, GNB=Gram negative bacilli Gram stain was positive in 22(70%) cases of ABM, 8(25.80%) were gram positive cocci in pairs, 1(3.22%) was gram positive cocci in chain and 13(41.93%) were gram negative bacilli. Fig-31:Results of CSF culture among the laboratory confirmed cases of ABM 4(12.90%) 3(9.67%) 16(51.61%) 3(9.67%) 2(6.45%) S.pneumoniae H.influenzae K.pneumoniae E.coli C.koseri A.baumanii P.aeruginosa No growth 1(3.22%) 1(3.22%) 1(3.22%) CSF culture results in the present study showed that 15(48.38%) cases of ABM were culture positive. S.pneumoniae was the commonest organism isolated,4(12.90%) in cases ,followed by H.influenzae and K.pneumoniae i.e. 3(9.67%) cases each. C.koseri, A.baumannii and P.aeruginosa were isolated in 1(3.22%) case each. About 16(51.61%) cases were culture negative. Fig-32: Results of CSF LAT among laboratory confirmed cases. Negative 14(45.16%) H.influenzae 8(25.80%) S.pneumoniae 7(22.58%) GBS 2(6.45%) GBS=Group B Streptococci. CSF LAT was positive in 17(54.83%) cases of ABM. 8(25.80%) were H.influenzae type b, 7(22.58%) were S.pneumoniae and 2(6.45%) were Group B Streptococci. TABLE-10:Comparison of CSF Gram stain, Culture and LAT(n=31).[percentage values in parenthesis] TESTS Positive Negative Total Gram stain 22(70.96) 09 (29.03) 31(100) Culture 15 (48.38) 16(51.61) 31(100) LAT 17 (54.83) 14 (45.16) 31(100) Fig -33:Etiological agents identified in CSF by all methods. 25 22 Total number 20 15 16 17 14 15 positive 10 negative 9 5 0 Gram stain Culture LAT Test The comparative analysis of Gram stain, culture and LAT in the present study showed that culture was positive in 48.38%, Gram stain in 70.96% and LAT in 54.83% of the 31 ABM cases. CSF Gram stain could identify the maximum number of cases of ABM 70.96%(22) ,followed by LAT ,54.83%(17) cases. TABLE-11 :Etiological agents identified in CSF by various methods (n=31) [percentage values in parenthesis] Organisms Total identified Gram stain Culture positive positive LAT positive H.influenzae 9(29.03) 7(77.77) 3(33.33) 8(88.88) S.pneumoniae 7(22.58) 5(71.42) 4(57.14) 7(100.00) GBS 2(6.45) 1(50) 0 2(100.00) Other GNB 8(25.80) 4(50) 8(100) 0 Species 5(16.12) 5(100.00) 0 0 31 22(70.96) 15(48.38) 17(54.83) unidentified Total H.influenzae was the commonest isolate in the present study positive in 9(29.03%) cases, followed by S.pneumoniae in 7(22.58%) cases. 2 cases of Group B Streptococcus were identified by LAT only. Overall fastidious bacteria like H.influenzae. S.pneumoniae and GBS were more often identified by LAT compared to Culture. TABLE -12: CSF LAT results compared with administration of antibiotics prior to CSF collection among the laboratory confirmed cases of ABM.(n=31) Prior LAT positive LAT negative Antibiotics Total (%) (n=31) No % No % Given 12 38.70 11 35.48 23 (74.19) Not given 5 16.12 3 9.67 Total 17 54.38 14 45.16 p>0.05 08 (25.80) 31 Prior antibiotic administration did not have statistically significant association with LAT results. TABLE-13: CSF culture results compared with administration of antibiotics prior to CSF collection among the laboratory confirmed cases of ABM.(n=31) Prior Culture positive Culture negative Total (%) antibiotics (n=31) No % No % Given 11 35.48 12 38.70 23 (74.14) Not given 4 12.90 4 12.90 08(25.80) Total 15 48.38 16 51.61 31 p>0.05 The association between CSF culture results and prior antibiotic administration was not statistically significant. TABLE-14: CSF Gram stain smear results compared with administration of antibiotics prior to CSF collection among the laboratory confirmed cases of ABM(n=31). Prior Gram stain + Gram stain - antibiotics Total (%) (n=31) No % No % Given 16 51.61 7 43.47 23 (74.19) Not given 6 19.35 2 21.74 08 (25.80) Total 22 70.96 9 29.03 31 p>0.05 Statistically significant association between Gram stain and prior antibiotic administration was not observed in the present study. TABLE-15:Accuracy indices of CSF Gram stain against CSF culture as gold standard. Culture positive Culture negative Total Gram stain+ 8 14 22 Gram stain- 7 71 78 Total 15 85 100 On comparing CSF Gram stain and CSF Culture ,Gram stain showed a sensitivity of 53.33%, specificity of 83.52%, positive predictive value of 36.36% and negative predictive value of 91.02%. TABLE-16:Accuracy indices of CSF LAT against CSF Culture as gold standard. Culture positive* Culture negative Total LAT positive 6 11 17 LAT negative 3 80 83 Total 9 91 100 *Positive Culture for H.influenzae , S.pneumoniae & E.coli. When CSF LAT and CSF Culture were compared, LAT had a sensitivity of 66.66%, specificity of 87.91%, positive predictive value of 35.29% and negative predictive value of 96.38%. TABLE-17:Table showing comparison of sensitivity , specificity, PPV& NPV of CSF Gram stain and CSF LAT with culture as gold standard. Sensitivity Specificity PPV NPV Gram stain 53.33% 83.52% 36.36% 91.02% LAT 66.66% 87.91% 35.29% 96.38% LAT was found to have a higher sensitivity i.e. 66.66% when compared to Gram stain 53.33%, however the specificity and NPV of LAT was marginally higher i.e. 87.91% and 96.38% ,compared to Gram stain i.e. 83.52% and 91.02%. The PPV was comparable. Table 18: Resistance pattern of the isolates. Organism No. A Ci Ce Ca Cpm C Ak Pt tested H.influenzae 3 1(33.33) 0 0 - 0 0 0 0 S.pneumoniae 4 1(25.00) 0 0 - 0 0 0 - K.pneumoniae 3 3(100) 1(33.33) 1(33.33) - 0 0 0 0 E.coli 2 2(66.66) 0 0 - 0 0 0 0 C.koseri 1 1(100) 0 0 - 0 0 0 0 A.baumannii 1 1(100) 1(100) 1(100) - 0 0 0 0 P.aeruginosa 1 - 1(100) 1(100) 0 0 - 0 0 The antimicrobial sensitivity pattern of our isolates showed that all Gram positive and many of the Gram negative organisms were 100% sensitive to amikacin and third generation cephalosporins (cefotaxime & ceftriaxone). Ampicillin was the least effective. TABLE-19:Mortality rate among the laboratory confirmed cases of ABM.(n=31)[percentage values in parenthesis] ORGANISMS TOTAL CASES CASE FATALITY H.influenzae 9(34.61) 5(55.55) S.pneumoniae 7(26.92) 1(14.28) Group B Streptococcus 2(7.69) 2(100.00) K.pneumoniae 3(11.53) 2(66.66) E.coli 2(7.69) 1(50.00) C.koseri 1(3.84) 0(00.00) A.baumannii 1(3.84) 0(00.00) P.aeruginosa 1(3.84) 1(100.00) Species Unidentified 5(16.12) 2(40.00) Total 31 14(45.16) Species Unidentified=only gram stain positive The case fatality rate in the present study was 45.16%(14/31) .Maximum case fatality was observed in case of Group B streptococcus100%(2/2) & P.aeruginosa 100%(1/1) meningitis ,followed by K.pneumoniae and H.influenzae in 66.66%(2/3) and 55.55%(5/9) respectively. DISCUSSION Acute bacterial meningitis is a medical emergency, which warrants early diagnosis and aggressive therapy. Most often therapy for bacterial meningitis has to be initiated before the etiology is known. The choice of initial antimicrobial therapy in community acquired acute bacterial meningitis (CAABM) is based on the most common pathogen prevalent in a particular geographical area , its antibiotic sensitivity pattern and the age group affected .6 Though the common pathogens associated with CAABM are S.pneumoniae, H. Influenzae and N.meningitidis, the aetiological agents and their relative frequency may vary in different geographical areas. Some changing trends in the epidemiology of CAABM have also been reported worldwide over the past few decades.6 For instance, the incidence of meningitis caused by Hib has decreased markedly in areas of the world where Hib conjugate vaccines are routinely used.26S.pneumoniae is the major cause of childhood bacterial meningitis in countries where Hib disease has been eliminated by vaccination.25 An accurate laboratory confirmation of the etiology in acute bacterial meningitis is essential to provide optimal patient therapy, appropriate case contact management, and reasoned public health actions. Prospectively, it also provides information upon which to base decisions regarding immunization programs, especially for countries without routine vaccination against the main acute bacterial meningitis pathogens. Although bacterial culture is considered to be the standard method, the negative effect of prior antimicrobial drug use on its sensitivity necessitates nonculture techniques for diagnosis.25 There is currently considerable interest in applying immunodiagnostic procedures to the rapid detection of microbial antigens in clinical specimens. This approach to the diagnosis of infectious diseases has been spurred by the development of techniques that are simple and, depending on the quality of the reagents used, can be both sensitive and specific. Immunological detection of bacterial antigens is particularly applicable to cerebrospinal fluid (CSF) obtained from bacterial meningitis patients, since high concentrations of antigen are generally found in these specimens.23 The present study was undertaken to study the bacteriological profile of meningitis and also to do a comparative evaluation of Gram stain, culture and LAT, in clinically suspected cases of acute bacterial meningitis, in children below 5 years of age. A total of 100 cases of children below 5 years of age with clinical suspicion of meningitis were tested for ABM. Age and Sex distribution of cases: The reported frequency of occurrence of ABM in hospital admissions among children below 5 years of age is 0.5 – 2.5 %, although the incidence in the general population is not known.4,5In our study ABM constituted 1.7% of all pediatric ward admissions among children below 5 years of age. The distribution of patients according to age and sex, noted in our study was 62/100 (62.00%) males and 38/100 (38.00%) females. The male to female ratio was 1.63:1(Table-5) Male to Female ratio: Table-20 showing Comparative studies of male to female ratio. Studies Year Ratio Bijay Mirdha et al 18 1991 1.5 : 1 Deivanayagan et al 10 1993 1.75 : 1 Bandaru Rao et al 8 1998 1.2 : 1 Ciji N. George et al 52 2002 1.5 : 1 Nanditha et al 4 2002 1.07 : 1 Present Study 2009 1.63 : 1 The male and female ratio in our study correlated with the studies of Deivanayagan et al10 and Ciji N. George et al52 who have reported 1.75:1 and 1.5:1 in their studies. All the studies show male preponderance including present study. 61(61%) children were below one year of age ,of which 24(24%) were neonates. Similarly, Chinchankar N,et al.,4in their study noted 42 of 58 cases (77%) , Deivanayagam N, et al.,10reported 44 of 55 cases (80%) and Kabra SK, et al.,5found 450 of 852 cases (52%) of ABM to be below one year of age. Distribution of symptoms: Patients presented with high grade fever, seizures and altered sensorium in 88 (88%), 70 (70%), and 56(56%) cases respectively. 37(37%) cases had refusal of feeds. About 36(36%) cases also presented with vomiting . Only 16 (16%) cases had meningeal signs viz neck rigidity and Kernig’s sign.(Table-2) Similar observations were made by other workers.4 The distinct clinical syndromes of CNS include acute bacterial meningitis, viral meningitis ,encephalitis, focal infections such as brain abscess and subdural empyema, and infectious thrombophlebitis1. In young infants the specific signs of meningeal inflammation are often minimal or absent and non specific manifestations such as irritability, lethargy and poor feeding may be the early or even the only findings.3 Altered sensorium and seizures are late features.4A small number of children (15%) may fail to exhibit any meningeal signs during their entire illness inspite of having meningeal inflammation as demonstrated by CSF pleocytosis.53 Clinical diagnosis of bacterial meningitis is often difficult. Hence a high index of suspicion is necessary to suspect meningitis and perform lumbar puncture.4 WHO criteria 51 WHO criteria defines a proven case of bacterial meningitis as : A case that is laboratory-confirmed by growing (i.e. culturing) or identifying (i.e. by Gram stain or antigen detection methods) a bacterial pathogen in the CSF or from the blood in a child with a clinical syndrome consistent with bacterial meningitis. As per the above criteria 31/100(31%) cases were laboratory confirmed as bacterial meningitis in present study.(Table:7) Gross appearance of CSF: The CSF appeared turbid in 13/31(41.93%) laboratory confirmed cases of ABM. In 18/31(58.06%) cases of ABM, CSF was not turbid. Nandita chinchankar et al4., noted CSF turbidity in 85% cases and N Deivanayagan ,et al.,10 in 56.4% cases in their study. Thus CSF turbidity was not reliable in ruling out acute bacterial meningitis. Cell Count Table-21 showing comparative studies of Cell count in ABM Studies Year Percentage of neutrophils Kalra et al 54 1985 68.4% Deivanayagan et al 10 1993 60% Nanditha et al 4 2002 70% Present Study 2009 64.5% CSF cell count was most commonly in the range of 51-500 cells/cumm i.e. in 15(48.38%) cases of ABM.12(38.70%) cases were in the range of 650cells/cumm.(Table:8), 8(25.80%) of these had a normal CSF picture, of which 6(19.35%) were neonates and 2(6.45%) were beyond 1 month of age. Upto 15% of neonates may have bacterial meningitis in the absence of CSF pleocytosis.55 In 3(9.67%) cases there was lymphocyte predominance and this could be due to partial treatment of the cases as this leads to change in the CSF picture.4 In the present study, Neutrophils were seen predominantly in 20(64.5%) cases of ABM and correlates with the studies of Deivanayagan et al10 and Kalra et al54 . TABLE 22: Comparison of etiological agents isolated/identified in CSF with other studies(n=26).[ values within the parentheses indicate percentage] Studies H.influenzae S.pneumoniae Group B Others streptococci Chinchankar N, 14 (26) 21 (38.88) 0 9 (16.66) 5 (10) 4 (8) 0 21 (42) 28 (24.56) 15 (13.15) 2 (1.75) 10 (8.7) 7 (19.44) 22 (61.11) 0 1 (2.7) 5 (10.41) 1 (2) 27 et al4 Mirdha BR,et Al18 Deivanayagam N, et al.10 Das BK, et al.21 Finlay FO, et al19 15 (31.25) (56.25) Sahai S, et al22 17 (17) 12 (12) 0 6 (6) Vishwanath G ,et 9(22.5) 7(17.5) 1(2.5) 15(37.5) 7 (22.58) 2 (6.45) 8 (25.80) al.56 Present study 9(29.03) * Excluding 5 cases which were positive only on Gram stain and could not be speciated. H.influenzae was the most common etiological agent of ABM in the present study accounting for 9/31( 29.03%) cases. All the 9 cases were below 1 year of age. S.pneumoniae was the next most common etiological agent accounting for 7/31(22.58%) cases of ABM. Similar results were observed by Vishwanath G, et al.56, N Deivanayagan ,et al10 and Sahai S ,et al 22 ,in their studies. K.pneumoniae was the third most common causative agent of ABM in the present study , accounting for 3/31(9.67%) cases .1(33.33%) was a neonate and the other 2(66.66%) were more than 1 month of age. Group B Streptococcus was the etiological agent in 2/31(6.45%) cases of ABM in the present study (Table:9). Similar isolation rates have been reported by other workers 10,56. Although Group B Streptococcal meningitis is known to occur in neonates, recently there have been reports of invasive Group B Streptococcus (GBS) disease in children beyond early infancy and nonpregnant adults associated with diabetes mellitus, liver disease, peripheral vascular disease , neoplastic diseases, wound infections ,elective abortion especially septic incomplete abortion , dermal sinus, and in HIV-positive patients28. M Sanjeev et al., has reported a case of uncomplicated meningitis due to GBS in a previously healthy 5 year old boy.57 Similarly both the cases in the present study were beyond one month of age and both were without any obvious predisposing factor. 2 children beyond 1 month of age , presented with E.coli and C.koseri meningitis, and both gave a positive history of Chronic suppurative otitis media(CSOM). E.coli was the causative agent in another case of neonatal meningitis. Acinetobacter baumannii and Pseudomonas aeruginosa were the causative agents in one case each of neonatal meningitis(3.22%). No case of meningitis due to N.meningitidis was noted in the present study, since N.meningitidis isolation is uncommon as long as an outbreak does not occur.24 In about 5/31(16.12%) cases of ABM the organism could not be speciated as they failed to grow in the subsequent culture nor they were LAT positive. They were identified only on Gram stain, 3 were gram positive cocci in pair and 2 were gram negative bacilli. Gram Stain Table-23 showing comparative studies of percentage positivity of Gram stain in ABM Studies Year Percentage Benedict et al 58 1982 64% Bijay R Mirdha et al 18 1991 74% Deivanayagan et al10 1993 30% Bandaru rao et al8 1998 85.7% Nanditha et al 4 2002 67% Shiva Prakash et al 69 2004 36.36% Col.Prasad et al 60 2005 21.05% Present Study 2009 70.96% In the present study, percentage positivity of Gram stain was 70.96%. 29.03% of cases were negative on Gram stain.(Fig:30) Our study correlates with studies of the other Indian authors, Nanditha chinchankar et al4 and Bijay R Mirdha et al18, who reported 67% and 74% Gram stain positivity respectively. The probability of visualising bacteria on gram stained CSF smear is dependent on the number of organisms present; 25% are positive with < 1000 colony forming units (CFU) per ml of CSF, 60% with 1000 – 10,000 CFU/ml and 97% with > 10,000 CFU/ml.5 Prior use of antibiotics, technique used for smear preparation, staining technique and the observer’s skill and experience are the other determinants of smear positivity. Despite the low Gram stain positivity from CSF sample and the fact that a negative Gram stain does not rule out infection, the importance of a positive smear cannot be over emphasized , especially in developing countries when financial constraints limit the use of other rapid diagnostic tests to diagnose the potentially fatal infection.6 In addition to being a low cost test, it also provides a clue to the possible etiology thus making empirical therapy more focussed, especially in view of the low sensitivity and long turn around time of culture reports . Nevertheless the major limitation of gram stain is the inability to speciate the organism and to ascertain the antibiotic susceptibility of the isolate. In the present study ,Gram stain provided the evidence of bacteria in 22(70.96%) lab confirmed cases of ABM. Of these 22, 8 samples yielded growth on culture ,while 14 were culture negative. 9 of the culture negative cases were positive by LAT. Thus in a total 5 cases which were both culture and LAT negative , the etiologic pathogen was detected only by Gram stain.(Table:14) . Culture Table-24 showing comparative studies of culture isolation in ABM Studies Sippel et al 23 Year 1984 Percentage 72.83% Kalra et al 54 1985 77.6% Harcharan Singh et al 9 1988 42.8% Bijay R Mirdha et al 18 1991 66.66% Bandaru Rao et al 8 1998 66.2% Deivanayaganm et al 10 1993 22% Tankhiwala et al 61 2001 36% Nandhita et al 4 2002 50% Present Study 2009 48.38% In the present study, culture detected 48.38% of lab confirmed cases of ABM. 51.61% of cases were culture negative(Fig:31). Our study correlates with studies of the other Indian authors,Nanditha chinchankar et al4and, Harcharan Singh et al9 who reported 50% and 42.8% culture positivity respectively.And was higher than Deivanayagam et al.10and Tankhiwala et al61 Majority of our isolates were gram negative organisms 73.33% and only 26.66% were gram positive organisms. Bandaru Rao et al8 in their study have reported predominance of gram negative bacteria (63.3%), while gram positive bacteria were found only in 36.7% of cases. This correlates with the gram negative and gram positive isolation in the present study. Reasons as reviewed in other studies for low CSF culture yield are: Low bacterial load.22 Use of antimicrobial agents prior to CSF collection.5 Poor culture media.5 Poor culture facility such as non availability of special media, stored in unsatisfactory conditions, samples refrigerated before plating, delayed and faulty inoculation, lack of transport media and inadequacy in processing of CSF specimens.10,22 Autolytic enzymes.18 Lack of 24 hour facility for processing CSF samples.6 Therefore, prompt inoculation of CSF on culture media plates at bedside by residents rather than transporting the CSF specimen to laboratory, if transported then using transport media is recommended.5,7 Inspite of the above limitations , the utility of culture in terms of species identification and the ability to perform antimicrobial susceptibility testing makes it superior to Gram stain and LAT. LAT Table-25 showing comparative studies of percentage positivity of LAT in ABM Studies Year Percentage Sippel et al 23 1984 83.95% Harcharan Singh et al 9 1988 100% Bijay R Mirdha et al 18 1991 100% Deivanayagan et al 10 1993 84% Nanditha Chinchanakar et al 4 Das K. et al 21 2002 78% 2003 83% Shivaprakash et al 59 2004 69.09% Present Study 2009 54.83% In the present study, Bacterial antigen detection test could detect 17 lab confirmed cases of ABM (54.83%) viz, 8 H.influenzae, 7 S.pneumoniae and 2 Group B Streptococci. 45.16% were LAT negative.(Fig:32) No case of N.meningitidis was detected in the present study as its isolation is uncommon as long as an outbreak does not occur.24Besides the detection of N.meningitidis Group B antigen by immunological techniques continues to pose a problem and this has been attributed to the poor immunogenicity of this particular antigen.62 Comparative studies of Harcharan Singh et al9 Bijay Mirdha et al18 quote a higher detection rate of LAT in their studies because majority of organism in their study comprised of meningococci, pneumococci and Hib that were negative for culture, as compared to our study where 35.48% of organism were Non-fermenters and Enterobacteriaceae other than E.coli , that were culture isolated but the reagents to detect them, were not included in the panel of the kit. In developing countries like India where a majority of neonatal meningitis is caused by Enterobacteriaceae , culture is superior to LAT in neonatal meningitis as the latter is not designed to detect Enterobacteriaceae other than E.coli, besides, the cost of LAT is the major limiting factor. Effect of prior antibiotic administration on CSF Gram stain , Culture and LAT: In the present study, CSF Gram stain could identify maximum number of cases(16/31) of acute bacterial meningitis when compared to CSF LAT(12/31) and CSF Culture(11/31) ,in cases who had received the antibiotics prior to lumbar puncture(Table:11,12,13). These values therefore ,do not support the claim that the LAT is of greater value than Gram staining in arriving at a diagnosis once antibiotic treatment has started. Similar findings were reported in another study.19 Although not statistically significant ,LAT detected a marginally higher number of cases i.e. 38.70% in comparison to Culture i.e. 35.48% in cases who had received antibiotics prior to CSF collection. Comparing CSF Gram stain and CSF Culture: Accuracy indices of Gram stain against Culture showed a sensitivity of 53.33%, specificity of 83.52% positive predictive value of 36.36% and negative predictive value of 91.02% in the present study(Table:15) Hristeva et al.,55have reported the sensitivity of Gram stain to be 86%, specificity 99% , positive predictive value 46%, and negative predictive value of 99.9% in their study. In another study done by Mark I Neuman et al.,63 the reported sensitivity of Gram stain is 67%, specificity 99.9% , positive predictive predictive value of 60% and negative predictive value of 99.9%. The frequency of bacterial meningitis in high enough among patients with an organism seen on Gram stain to warrant presumptive treatment, pending the results of CSF Culture. On the other hand , the positive predictive value is low enough that unless there are other factors that increase the risk of bacterial meningitis (eg: antibiotic pretreatment, very low CSF glucose), the presence of organisms alone would not require a complete empiric course of therapy.63 The low positive predictive value of Gram staining is a consequence of the low prevalence of meningitis in the population. Clinicians should be aware that diagnostic tests performed in a population with a low prevalence of disease are likely to generate many false positive results and have a low positive predictive value. 55 In the present study, inspite of the low PPV of 36.36% ,the test had a moderate sensitivity of 53.33% .With a specificity and NPV as high as 83.52% and 91.02% respectively, a negative Gram stain should reassure the clinician. Additionally the low cost of Gram stain and rapid availability of results makes it an attractive option. Similarly, if the culture is negative the clinician must also make a determination as to whether the culture is falsely negative.63 Therefore in view of the above facts, additional tests like CSF chemistries , cell count and antigen detection should be considered to make a diagnosis in order to avoid false positive results. In the present study 5 cases that were Gram stain positive and negative on Culture and LAT, had raised cell count and thus treated as cases of ABM. Comparing CSF LAT and CSF Culture. Accuracy indices of LAT against culture in the present study showed a sensitivity of 66.66%, specificity of 87.91%, positive predictive value of 35.29% and negative predictive value of 96.38%(Table:16). P A M Camargos et al., have reported the sensitivity and specificity of LAT to be 83.8% and 94.0% respectively.64 In another study, Paulo A M et al11., have reported the sensitivity and specificity of LAT to be 93.0% and 100% respectively. Among the 31 lab confirmed cases of ABM 16 cases were culture negative. Among these 16 cases LAT was positive in 11 cases,6 were H.influenzae type b, 3 S.pneumoniae and 2 Group B Streptococcus(Table:10,11). The fastidious nature of these bacteria and the effect of prior antibiotic therapy in most of our cases probably explains the poor sensitivity of culture in these cases, conversely LAT was better at identifying these bacteria .9 of these 11 cases were also positive by Gram stain but 2(6.45%) of the samples which did not show any evidence of pathogen either in Gram stain or Culture ,were positive by LAT only, thus helping clinch the diagnosis. As is evident by the results ,despite the moderate sensitivity of LAT in the present study, LAT was superior to culture in identifying fastidious bacteria like H.influenzae, S.pneumoniae and Group B Streptococci. LAT was only marginally superior to Gram stain in identifying these cases. Using CSF culture as a gold standard for calculating sensitivity, specificity, PPV and NPV, has its own limitations, as CSF culture is less sensitive compared to serologic tests. So, a culture negative and LAT positive test result that is taken as false positive could actually be a true positive and therefore could influence the sensitivity, specificity and PPV adversely. However, since culture is the gold standard we too have used this for comparison of the tests. LAT was positive in 6 of the 15 culture positive cases(Table:10,11) , 2 Hib & 4 S.pneumoniae. Among the 9 culture positive and LAT negative cases 6 were gram negative bacilli whose reagents were not included in the panel of the kit. Hence LAT failed to detect these organisms. Among the remaining 3 culture positive cases(1 H.influenzae and 2 Escherichia coli ) LAT failed to detect the corresponding antigens in the CSF. The false negative LAT could be possibly because of low antigen titres in the CSF.5It is possible that the antiserum in diagnostic LAT kit does not detect all the capsular serotype prevalent in a geographical area or probably as yet unrecognised serotypes are the causative agents in such cases.This probably explains the false negative LAT in our study. False positive LAT results may occur in case of recent immunization with Hib conjugate vaccine and infection with cross reacting organisms.6 Despite the good specificity of LAT 87.91% in the present study, the low positive predictive value 35.29% is of concern,especially in view of the high cost of the test. Nevertheless because of the high NPV of 96.38%, a negative LAT fairly rules out ABM in clinically suspected cases. It is important to note that bacterial antigen testing (BAT) was originally designed to be used in patients who demonstrated laboratory and clinical findings consistent with meningitis. Despite these initial intentions, this test has been used much too often as a screening tool in cases of suspected meningitis in patients whose CSF specimens have normal chemistries and cell counts. The indiscriminate use of BAT without consideration of the chemical and cytological profiles of the CSF is a misuse of valuable resources.65 Systematic review of the performance of laboratory test against clinical gold standards leads to more rational use of laboratoty resources and improves interpretation at the bedside. However several studies advocate the usefulness of LAT, especially in pretreated cases and to differentiate partially treated pyogenic meningitis from tuberculous meningitis which is rampant in India.6 Despite its drawbacks, we found LAT to be simple, rapid procedure suitable to be used as an adjunct laboratory test. Antibiotic susceptibility pattern of the isolates. The antimicrobial sensitivity pattern of our isolates showed that all Gram positive and many of the Gram negative organisms were 100% sensitive to amikacin and third generation cephalosporins (cefotaxime & ceftriaxone). Ampicillin was the least effective(Table-18).These findings are in accordance with other investigators.66,69There is an increasing resistance among the major pathogens which cause meningitis to most of the traditional antimicrobial agents used empirically. A high percentage of ampicillin resistant H.influenzae were isolated in the present study. Similar findings have been observed by other workers.70,71 The isolates were found to be 100% sensitive to Chloramphenicol in the present study. In our study we found that majority of our isolates were highly sensitive to cefotaxime and ceftriaxone. Recently ceftriaxone is used as drug of choice in many centres in treating meningitis. Apart from having a broad spectrum of activity, ceftriaxone has excellent penetration into the CSF with a ratio of achievable CSF concentration to minimum inhibitory concentration levels in the range of 100:1.72A ratio of greater than 10:1 has been suggested as the most critical factor in determining the success of therapy.73 Case Fatality Rate Table-26 showing comparative studies of case fatality rate in ABM Studies Year Percentage Lata Kumar et al 47 1980 44% Deivanayagan et al 10 1993 22% Bandaru Narasinga rao et al 8 1998 13% Nanditha Chinchanakar et al 2002 31.5% 2009 45.16% 4 Present Study In the present study, the case fatality is 45.16% and is similar to the studies of other Indian authors like – Nanditha Chinchankar et al4 and Lata Kumar et al.47 Mortality was highest in case of P.aeruginosa and Group B Streptococcal meningitis where in all the positive cases expired. Followed by K.pneumoniae meningitis in which 2/3(66.66%) cases expired. Case fataliy rate in case of H.influenzae meningitis was 55.55% and 14.28% in case of Pneumococcal meningitis. (Table19) CONCLUSION The incidence of bacterial meningitis was 1.7% in the population studied. Male were affected more commonly than the females making a male to female ratio of 1.62:1. Haemophilus influenzae was the most common etiological agent of ABM in early childhood followed by Streptococcus pneumoniae. The simple Gram stain smear of CSF was the most useful single test for identifying bacterial meningitis. However in view of the low positive predictive value of Gram stain, CSF Chemistries and LAT could provide additional information. LAT has an advantage over Gram stain in terms of species identification. It was also more sensitive compared to conventional Gram stain and Culture technique in identifying the fastidious organisms like H.influenzae , S.pneumoniae and Group B Streptococcus. CSF Culture is the gold standard and no test can replace the utility of culture especially so in neonates as LAT does not identify Enterobacteriaceae other than E.coli. Thus CSF Culture is crucial to the diagnosis of neonatal meningitis regardless of the other laboratory results. The case fatality rate of ABM in early childhood is likely to be high due to co-morbid conditions such as septic shock and raised intracranial pressure. Early referral from peripheral health care facility and proper intensive care management in the referral unit could improve the results. No single test possessed the quality of an ideal diagnostic test for the diagnosis of acute bacterial meningitis. Thus, the combination of these three tests will yield more productive results rather than any of the tests alone. We also found that CSF latex agglutination test is a valuable tool in the rapid etiological diagnosis of acute bacterial meningitis in early childhood. However, it should not be used indiscriminately as a screening tool in the routine diagnostic laboratory and its use should be reserved for the detection of bacterial antigens in CSF specimens that fail to reveal the organism on Gram stain. Besides the high cost of LAT is a prohibitive factor in resource poor countries. SUMMARY This prospective study for a period of one year was conducted in the department of Microbiology, Karnataka Institute of Medical Sciences Hospital, Hubli,from December 2008 to November 2009. Children below 5 years of age with signs and symptoms of meningitis admitted in the Pediatric ward, KIMS hospital, Hubli, were included in the study. Aim of the study was: 1)To know the incidence of bacterial meningitis in children below five years of age.2) To identify the specific etiological agent causing bacterial meningitis in children below five years of age by CSF culture.3) To detect bacterial antigens in CSF by latex particle agglutination test.4) To compare conventional culture method and antigen detection by latex particle agglutination test. A total of 100 samples of CSF collected under strict aseptic precautions, were subjected to cell count, Gram stain ,Culture and LAT. Latex agglutination tests (LAT) for the detection of five bacterial antigens was done using BD DIRECTIGEN Meningitis Combo Test kit, manufactured by Becton and Dickinson Company, USA. The BD DIRECTIGEN Meningitis Combo Test kit contained antibody coated latex beads for the detection of Haemophilus influenzae type b, Streptococcus pneumoniae, Escherichia coli K1, group B streptococcus and Neisseria meningitidis groups A, B, C, Y and W135. The frequency of ABM in the age group <5 years in hospital admissions noted in our study was 1.7%. The disease was more common in males with a male to female ratio of 1.63:1, in the present study. Cases presented with wide array of symptoms with fever being the most common followed by seizures, altered sensorium ,refusal of feeds and vomiting. Signs of meningeal irritation were present only in 16% of cases. 31 cases were declared as laboratory confirmed cases of ABM as per the WHO criteria[147] 64.5% cases of ABM had predominant neutrophil count in their CSF. 9.67% cases had predominant lymphocyte count. 25.80% cases had normal CSF cell count among them 19.35% were neonates and 6.45% were beyond 1 month of age. An etiological agent was speciated by means of CSF Culture and CSF LAT in 26/31 (%) cases of ABM. Most common etiological agent was, H. Influenzae in 9 cases,followed S. Pneumoniae in 7 cases ,Klebsiella pneumoniae in 3 cases Group B streptococcus and Escherichia coli in 2 cases each, and one each of Citrobacter koseri ,Acinetobacter baumanii, and Pseudomonas aeruginosa .Remaining 5 cases were only Gram stain positive ,3 smears showed Gram positive cocci in pairs and 2 Gram negative bacilli. H.influnzae was most common etiological agent of ABM in children below 1 year of age ,while S.pneumoniae was more common in children above infancy. Gram stain was positive in 22 of cases, Gram positive cocci in pairs in 8 cases, Gram positive cocci in chains in 1 case and Gram negative bacilli in 13 cases. Thus Gram stain could identify maximum number of cases of ABM in the present study. CSF Culture could identify 15 cases in the present study , 4 S. pneumoniae,3 H.influenzae, 3 K.pneumoniae, 2 E.coli, 1 each of C.koseri, A.baumanii, and P.aeruginosa. CSF LAT was positive in 17 cases , 8 H.influenzae, 7 S.pneumoniae and 2 Group B Streptococcus. Thus LAT was superior to Gram stain and Culture in identifying the fastidious bacteria which are the most common causative agents of ABM. Accuracy indices of Gram stain against Culture showed a sensitivity of 53.33%, specificity of 83.52% ,positive predictive value of 36.36% and negative predictive value of 91.02% in the present study. Accuracy indices of LAT against culture showed a sensitivity of 66.66%, specificity of 87.91%, positive predictive value of 35.29% and negative predictive value of 96.38%, in the present study. Thus CSF LAT was more sensitive than Gram stain. Specificity and negative predictive value were marginally higher compared to Gram stain, while the positive predictive values were comparable. The association between prior antibiotic administration i.e., before the lumbar puncture and the results of CSF Gram stain , Culture and LAT were not statistically significant, with a marginally higher rate of positivity by LAT and Gram stain compared to culture in these cases. AST was done on all culture isolates by the Kirby Bauer disc diffusion method . All Gram positive and many of the Gram negative organisms were 100% sensitive to amikacin and third generation Cephalosporins (cefotaxime & ceftriaxone). Ampicillin was the least effective. The isolates were found to be 100% sensitive to Chloramphenicol in the present study. The rate of mortality in the present study was 45.16%.Maximum case fatality was observed in case of Group B Streptococcus and P.aeruginosa meningitis.. PROFORMA “EVALUATION OF THE CONVENTIONAL CULTURE METHOD AND RAPID ANTIGEN DETECTION METHOD (LATEX PARTICLE AGGLUTINATION TEST) FOR DIAGNOSIS OF BACTERIAL MENINGITIS IN CHILDREN BELOW FIVE YEARS OF AGE” Name of the patient: Age: Address: Informant: Clinical History: Complaints Duration of present illness: History of medication: Past history Obstetric history: Previous investigations (if any): Signs of examination: Nature of the samples sent Time and date of collection: Sex: I.P.No. CSF ANALYSIS: Cell count Cell type Sugar Protein MICROBIOLOGICAL STUDY: SPECIMEN: Cerebro spinal fluid(CSF) GROSS APPEARANCE: MICROSCOPY: 1. GRAM STAIN: CSF CULTURE: 1. BLOOD AGAR: 2. CHOCOLATE AGAR: 3. MAC CONKEY AGAR: 4. BRAIN HEART INFUSION BROTH: RELEVANT BIOCHEMICAL TESTS: ANTIBIOTIC SENSITIVITY TESTING: SEROLOGY: Latex particle agglutination test: REPORT: Treatment: Signature of candidate: Signature of guide:
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