Syngeneic Models Progress immunotherapeutic development with CrownBio’s panel of over 30 syngeneic models Discover the benefits of using our fully characterized and checkpoint inhibitor benchmarked syngeneic models to accelerate your immuno-oncology drug discovery programs. The development of novel immunotherapeutics presents many challenges, including the need for immunocompetent preclinical models. Syngeneic mouse models are undergoing a resurgence as an accessible platform to evaluate the efficacy and MOA of novel agents and combination strategies. CrownBio provides an extensive syngeneic platform of over 30 models covering more than 15 cancer types for immunotherapeutic assessment. •• Select the most appropriate models for checkpoint inhibitor novel agent/combination studies using a vast array of benchmarking data (e.g. anti-PD-1, PD-L1, CTLA-4 antibodies) complemented by immunoprofiling and NGS. Historical origins of in vitro cell line: murine tumor Implant into original inbred mouse strain Syngeneic Models for I/O Research Standard subcutaneous models for I/O agent evaluation Advanced orthotopic, bioluminescent, and metastic modeling •• Choose the right model for bacterial, viral, and vaccine immunotherapy research based on baseline immunophenotyping at the subcutaneous or orthotopic site. •• Evaluate efficacy quickly with standard subcutaneous Checkpoint inhibitor benchmarking models, alongside disease relevant tumor microenviroment in orthotopic and metastatic sites with bioluminescent imaging. Combination therapy strategies •• Assess immunomodulatory effects through post-treatment Immune cell profiling immunoprofiling including T cell infiltration. •• Fast track new immuno-oncology agents using the first large-scale in vivo syngeneic screening platform. Large scale in vivo screening +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Key Facts CrownBio provides a well characterized Syngeneic Model Panel: • Over 30 models covering 15 cancer types, with further models undergoing validation. • Standard subcutaneous models for efficacy evaluation, complemented by orthotopic models to better recapitulate the tumor microenvironment, and metastatic models allowing targeting of clinically relevant metastatic invasion. • Bioluminescent metastatic models to monitor in-life disease progression, and primary to end stage disease. • Full validation data (baseline and post-treatment immunoprofiling, immunotherapy, standard of care, and NGS data) easily searchable through MuBase®, CrownBio’s online collated immuno-oncology model database. • Checkpoint inhibitor benchmarking data including anti-PD-1, PD-L1, and CTLA-4 antibodies to select the appropriate models for single agent and combination studies, including combination immunotherapy and immunotherapy + chemotherapy (including inducer of ICD) strategies. • Validated immunoprofiling including treatment induced T cell infiltration assessment to characterize immunomodulatory effects of novel agents and treatment regimens. • Microbiome analysis to correlate gut microbiomes across our syngeneic models with response to therapy. • CrownBio’s large-scale, in vivo syngeneic screening platform MuScreen™, the first screening platform of its type, to fast track immunotherapy compounds. Syngeneic Model Use in Preclinical ImmunoOncology Research CrownBio Provides a Large and Well Profiled Panel of Syngeneic Models Evaluating immunotherapeutic agents brings many challenges, including the need for preclinical models within immunocompetent hosts. Syngeneic mouse models have seen a resurgence in use as a straightforward platform enabling efficacy testing and elucidation of the mechanism of action of new immuno-oncology treatments. Our large panel of well validated syngeneic models covers over 15 cancer types and more than 30 individual models (summarized in Table 1, availability site by site is covered within our In Vivo Cancer Pharmacology Model catalogs available on request). CrownBio are constantly improving and expanding the syngeneic collection, and our pipeline of models currently undergoing validation includes: Syngeneic mouse tumors are allografts derived from immortalized mouse cancer cell lines which originate from the same inbred strain of mice. The recipient mice have fully competent mouse immunity and are histocompatible to the allografted tumors. Models have now been extensively profiled genomically and immunologically (both pre- and post-treatment), and for agent efficacy to allow simple and rapid model selection for preclinical studies. Agents commonly tested using syngeneics include checkpoint inhibitors such as anti-PD-1 and PD-L1 antibodies in proof of concept studies. Syngeneics can also be utilized for evaluating a wide range of other immunotherapeutics, including bacterial, viral, and vaccine therapies, all of which have driven syngeneics to become one of the most commonly utilized immuno-oncology models in preclinical investigations. • • • • • • breast C127I model chondrogenic ATDC5 model colon CMT-93 model liver Hepa1c1c7 model lung LA-4 model kidney RAG model. +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Factsheet Table 1: Summary of Syngeneic Immunotherapy Models X = data available; *bioluminescent models established with further validation ongoing. Cancer Type Cell Line Model Type Anti-PD-1 Anti-PD-L1 Anti-CTLA-4 RNAseq Immune Cell Profiling Bladder MBT-2* Subcutaneous X X X X X Breast 4T1* Subcutaneous, orthotopic, metastatic, bioluminescent X (s.c., ortho) X (s.c., ortho) X (s.c., ortho*) X (s.c., ortho*) X (ortho) Ongoing (s.c.) EMT6* Subcutaneous, orthotopic, bioluminescent X (s.c.) X (s.c.) X (s.c.) X (s.c.) X (s.c.) JC Subcutaneous Ongoing Ongoing Ongoing Ongoing X Colon26 Subcutaneous X X X Ongoing X CT-26.WT* Subcutaneous X X X X X Fibrosarcoma WEHI-164 Subcutaneous X Ongoing Ongoing Ongoing Ongoing Glioma GL261 Subcutaneous, orthotopic Ongoing (s.c., ortho) Ongoing (s.c., ortho) Ongoing (s.c., ortho) X (s.c.) Ongoing (ortho) Ongoing (s.c., ortho) Kidney Renca* Subcutaneous X X X X X Leukemia C1498 Subcutaneous Ongoing Ongoing Ongoing Ongoing X L1210 Subcutaneous X X X X X H22* Subcutaneous, orthotopic, bioluminescent X X X X X Hepa 1-6* Subcutaneous, orthotopic, bioluminescent X (s.c.) X (s.c.) X (s.c.) Ongoing (s.c.) X (s.c.) KLN205 Subcutaneous X X X X X LL/2 (LLC1)* Subcutaneous, metastatic X X X X X A20 Subcutaneous X X X X X E.G7-OVA Subcutaneous X Ongoing Ongoing Ongoing Ongoing EL4 Subcutaneous X X X X X L5178-R (LY-R) Subcutaneous X X X Ongoing X Colon Liver Lung Lymphoma P388D1 Subcutaneous X X X X X Mastocytoma P815* Subcutaneous Ongoing X Ongoing Ongoing Ongoing Melanoma B16-BL6 Subcutaneous X X X X X B16-F0 Subcutaneous Ongoing Ongoing Ongoing Ongoing Ongoing B16-F1 Subcutaneous Ongoing Ongoing Ongoing Ongoing Ongoing B16-F10* Subcutaneous, metastatic, bioluminescent X X X X X Clone M-3 (Cloudman S91) Subcutaneous Ongoing X Ongoing Ongoing Ongoing J558 Subcutaneous Ongoing Ongoing Ongoing Ongoing X MPC-11 Subcutaneous X X X X X P3X63Ag8U.1 Subcutaneous Ongoing Ongoing Ongoing Ongoing Ongoing N1E-115 Subcutaneous Ongoing Ongoing Ongoing Ongoing Ongoing Myeloma Neuroblastoma Neuro-2a Subcutaneous Ongoing Ongoing Ongoing Ongoing Ongoing Pancreatic Pan02* Subcutaneous, orthotopic, bioluminescent X (s.c.) X (s.c.) X (s.c.) X (s.c.) X (s.c.) Prostate RM-1* Subcutaneous X X X X X Standard Subcutaneous Models to Evaluate Novel Immunotherapies CrownBio standard syngeneic models shown in Table 1 are fully validated with growth, standard of care (SoC) and/or immunotherapy treatment data available. Complete background information, growth, and treatment data on models are included within MuBase our easy to use, proprietary online database. Models can be quickly searched and compared to find those appropriate for indivdual studies. Models with baseline immune cell profiling data are also highlighted in Table 1. CrownBio research has shown that baseline immune cell populations in untreated syngeneic models (T cells and the Teff/Treg ratio) may predict efficacy of anti-CTLA-4 and anti-PD-L1 antibodies, respectively(1). Example FACS analysis baseline data are included within Figure 1 for T cells (CD3+, CD4+, CD8+, CD4+/FOXP3+) and ratio of CD8+ Teffect/Treg cells, with further NK, MDSC, and macrophage data available in MuBase. +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Factsheet Figure 1: Basal Level of Immune Cells in Syngeneic Tumors A: T cell mean % of CD3+, CD4+, CD8+, CD4+/FOXP3+ in TIL. B: Ratio of CD8+ Teffect cells to Treg cells in total cell. Data generated at Crown Bioscience Taicang site. 60 40 As checkpoint inhibitors continue to be approved for a variety of cancer types, preclinical evaluation via syngeneic models can be used to identify their potential indications and combination therapy strategies. 30 20 P388D1 L5178-R A20 Pan02 EMT6 B16-F10 H22 L1210 RM-1 B16-BL6 CT-26.WT LL/2 ortho 4T1 MBT-2 Fold Change 35 30 25 20 Figure 2: Anti-PD-1 Antibody Efficacy Benchmarking in Syngeneic Models Antibody: RMP1-14. All data mean + SD. Data generated at Crown Bioscience Beijing and Taicang sites. 15 10 Renca EL4 MBT-2 LL/2 ortho 4T1 CT-26.WT B16-BL6 RM-1 H22 L1210 B16-F10 EMT6 A20 Pan02 P388D1 5 0 CrownBio has extensively profiled our syngeneic panel in vivo response to a variety of checkpoint inhibitors, providing clients with the information necessary to select models and the correct doses for combination therapy (available data shown in Table 1). Waterfall plots for our models tested with anti-PD-1, anti-PD-L1, and antiCTLA-4 antibodies are shown in Figure 2 through Figure 4. Table 1 also shows the availability of RNAseq data for our syngeneic models, which has been used to identify biomarkers to predict treatment response. Through generating detailed expression maps and mutational profiles, we have identified alternative gene splicing transcripts and gene fusions within our models. Further mutational analysis has indicated a number of our syngeneic models harbor mutations that may be useful for combination studies of targeted agents and immunotherapy, and we have identified a set of biomarkers that may be useful to predict immunotherapeutic agent response(2). We also provide syngeneic tumor samples for ex vivo research uses including tumor tissue histology (H&E staining), and frozen and formalin-fixed, paraffin-embedded tumor samples as required. 100 50 TGI (%) 0 Renca EL4 10 0 -50 He pa 16 H2 10 2 mg or EM 10m /kg th T6 g o /k 4 L5 T1 5mg g 1 1 CT 78 0m /kg 26 -R g/k 5 .W m g M T 1 g/ BT 0 kg E.G 7- L1 - 2 mg/ O 21 5 kg V 0 m A g 20 10m /kg 0u g su A2 g/m /kg bq 0 1 ou 4T 0m se 1 g B1 LL / 10m /k g 6 2 g B1 -F1 10m /kg 6- 0 1 g/ B 0 k KL L 6 mg g N2 10 /kg m RM 05 g/k -1 5m g P 1 g/ P3 an0 0m kg 88 2 g/k D1 5m g g E 10 /k M L 4 mg g PC 10 /k W -1 m g EH 1 g/ I-1 5m k g Re 64 g/ Co nca 5m kg lo 10 g/k n2 m g 6 g/ 5m kg g/ kg Mean (%) Examine a Vast Array of Checkpoint Inhibitor Benchmarking Data including Anti-PD1, PD-L1, and CTLA-4 Agents CD3+ CD3+CD4+ CD3+CD8+ Treg 50 For more information on these models and our pipeline of developing bioluminescent syngeneics please request our Optical Imaging FactSheet. Figure 3: Anti-PD-L1 Antibody Efficacy Benchmarking in Syngeneic Models Antibody: 10F.9G2. All data mean + SD. Data generated at Crown Bioscience Beijing and Taicang sites. 100 Advanced Orthotopic and Metastatic Disease Models, and Syngeneic Imaging Modalities and microenvironment • clinically relevant metastatic models of disease • bioluminescent metastatic models to study clinically relevant metastatic invasion, metastatic lesions in secondary organs, and the evaluation of agents to target this metastasis. TGI (%) • orthotopic models to more closely recapitulate the tumor situation 60 40 20 0 -20 -40 He p CT a 1 26 -6 .W 5m T g A2 10 /kg EM 0 1 mg/ T6 0m kg 1 g/k Cl L5 H2 0mg g ou 17 2 5 /k dm 8 m g an -R 5 g/k S m g RM 9 1 g/k - 5m g M 1 1 g/k BT 0m g -2 g or P8 5m /k g th 15 g / o 4T 5m kg Re 1 5 g/k P3 nca mg g 88 5 /kg D1 mg B1 EL 5m /kg 6- 4 g/k F1 5m g 0 g su Pan 10m /kg bq 02 g/ 4 5 k M T-1 mg g P C 5 /k g L1 - 11 mg/ 21 5 kg KL 0 1 mg N2 0m /kg 0 LL 5 5 g/k Co /2 mg g l 1 / B1 on2 0m kg 6- 6 5 g/k BL m g 6 g/k 5m g g/ kg CrownBio also provides advanced syngeneic modeling options (model availability detailed in Table 1): 80 +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Factsheet Figure 4: Anti-CTLA-4 Antibody Efficacy Benchmarking in Syngeneic Models A: 9D9, data mean + SD; B: 9H10. Data generated at Crown Bioscience Beijing and Taicang sites. B. 100 50 80 40 40 TGI (%) TGI (%) 60 20 1200 Tumor Voume (mm3) A. B. IgG2a 3mg/kg b.i.w. 1000 800 600 400 200 0 30 3 20 5 7 11 13 15 17 19 21 23 25 10 -20 0 L5178-R 10mg/kg MPC-11 10mg/kg KLN205 10mg/kg Individual control and treated spider plots are available for each model on request, to evaluate model response variability, example data for the liver syngeneic Hepa 1-6 model is included in Figure 5. 900 700 1000 800 600 400 200 0 3 5 7 9 11 13 15 17 19 21 23 25 Days post Tumor Inoculation 1200 D. IgG2a 3mg/kg b.i.w. Anti-PD-1 (RMP1-14) 10mg/kg b.i.w. Anti-PD-L1 (10F.9G2) 5mg/kg b.i.w. Anti-CTLA-4 (9D9) 5mg/kg b.i.w. 800 Anti-PD-1 (RMP1-14) 10mg/kg b.i.w. Anti-PD-L1 (10F.9G2) 5mg/kg b.i.w. Tumor Volume (mm3) Figure 5: Variability of Hepa 1-6 Response: Control and Treatment Spider Plots A: Mean tumor volume ± SEM. B-E: Individual reponse following treatment with IgG2a or checkpoint inhibitor shown. Statistical analysis on Day 25 post inoculation. Data generated at Crown Bioscience Taicang site. 1200 C. Tumor Volume (mm3) H2 2 EM 10 T m He 6 1 g/k pa 0m g su bq 1-6 g/k 4T 5m g -1 g M 10 /kg B m g/ CT T-2 26 10 kg or .WT mg/k th 1 0 g o 4T mg 1 /k g RM 10 m g Pa 1 10 /k g n0 m 2 g/k 10 g A2 m g L1 0 10 /kg 21 m B1 0 1 g/k g 6- 0m F B1 g 1 6- 0 5 /kg BL m 6 g/k LL 10m g P3 /2 g/k 1 88 0m g D Co 1 1 g/k lo 0m g n2 6 g/kg EL 5mg 4 Re 10 /kg nc mg a 1 /k 0m g g/ kg -40 Tumor Volume (mm3) 9 Days post Tumor Inoculation 0 600 500 400 300 1000 800 600 400 200 0 3 200 5 7 9 11 13 15 17 19 21 23 25 Days post Tumor Inoculation 100 0 5 7 9 11 13 15 17 19 21 23 Days post Tumor Inoculation Treatment T/C (%) TGI (%) p Value Anti-PD-1 (RMP1-14) 15 85 <0.001 Anti-PD-L1 (10F.9G2) 32 68 0.042 Anti-CTLA-4 (9D9) 13 87 <0.001 25 1200 E. Tumor Volume (mm3) 3 Anti-CTLA-4 (9D9) 5mg/kg b.i.w. 1000 800 600 400 200 0 3 5 7 9 11 13 15 17 19 21 23 25 Days post Tumor Inoculation +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Factsheet As researchers discover that chemotherapy, radiotherapy, and targeted therapies may interact or change the tumor immune environment, suitable models are required to evaluate combinations of these agents with immunotherapy. CrownBio is utilizing our syngeneic panel to investigate combination therapy strategies. Example data treating the H22 liver cancer syngeneic model with a combination of doxorubicin and anti-PD-L1 antibody showed that combined treatment had a greater effect than either treatment alone (Figure 6). Figure 7: Cyclophosphamide and Checkpoint Inhibitor Combined Treatment of A20 Model Elicits a Range of Responses Data generated at Crown Bioscience Taicang site. 2800 2400 2000 1600 1200 800 400 A range of checkpoint inhibitors have been trialed in combination with cyclophosphamide on the A20 B lymphoma model (Figure 7). Response to combination therapy varied, with the greatest tumor growth inhibition observed for cyclophosphamide combined with anti-GITR antibody. Figure 6: Combination Doxorubicin and Anti-PD-L1 Antibody Induces TGI of H22 Model Greater than Either Agent Alone Data generated at Crown Bioscience Taicang site. Tumor Volume (mm3) 2800 Vehicle q.w. 2400 Doxorubicin 5mg/kg q.4.d. 2000 Anti-PD-L1 (10F.9G2) 5mg/kg b.i.w. 1600 Doxorubicin 5mg/kg q.4.d. + Anti-PD-L1 (10F.9G2) 5mg/kg b.i.w. PBS CTX 20mg/kg CTX 20mg/kg + Anti-CTLA-4 (9D9) 75μg/mouse CTX 20mg/kg + Anti-PD-1 (RPM1-14) 75μg/mouse CTX 20mg/kg + Anti-OX40 (OX-86) 75μg/mouse CTX 20mg/kg + Anti-GITR (DTA-1) 75μg/mouse CTX 20mg/kg + Anti-CD20 (AISB12) 50μg/mouse 3200 Tumor Volume (mm3) Evaluate Combination Checkpoint Inhibitor and Chemotherapy Regimens 0 10 12 14 16 18 20 22 24 Days post Tumor Inoculation Treatment Tumor Volume (mm3) T/C Value (%) on Day 24 p Value PBS 2752 ± 240 -- -- Cyclophosphamide (CTX) 776 ± 238 28 <0.001 CTX + Anti-CTLA-4 (9D9) 601 ±154 22 <0.001 CTX + Anti-PD1 (RMP1-14) 1016 ± 363 37 0.004 CTX + Anti-OX40 (OX-86) 538 ± 348 20 0.001 CTX + Anti-GITR (DTA-1) 151 ± 91 5 <0.001 CTX + Anti-CD20 (AISB12) 895 ± 110 33 <0.001 1200 800 Combining Inducers of Immunogenic Cell Deacth (ICD) with Immunotherapy 400 0 3 5 7 9 11 13 15 17 19 21 Days post Tumor Inoculation Treatment Tumor Volume (mm3) T/C Value (%) on Day 21 p Value Vehicle 2291 ± 231 -- -- Anti-PD-L1 (10F.9G2) 519 ± 65 23 <0.001 Anti-CTLA-4 (9D9) 1436 ± 383 63 0.072 Anti-PD-L1 (10F.9G2) 268 ± 28 12 <0.001 A number of anticancer treatment strategies such as chemotherapeutic agents (e.g. oxaliplatin, doxorubicin, bortezomib, and mitoxantrone), radiotherapy, and oncolytic viruses have been highlighted as potential inducers of ICD. These treatments are known to increase the presentation of cell-associated antigens to CD4+ and CD8+ T lymphocytes by dendritic cells. Combination strategies of ICDs with immunotherapies could therefore provide opportunities to harness the immune system to extend survival, even among metastatic and heavily pretreated cancer patients, and may increase the efficacy of immunotherapy in cancer types with low immunogenic status. +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Factsheet Figure 9: Continuation.. CrownBio has combined the ICD oxaliplatin with anti-CTLA-4 in treating the CT26 colon cancer syngeneic model. Combination of anti-CTLA-4 immunotherapy with oxaliplatin resulted in an additive 40 tumor growth inhibition (Figure 8), and also induced a statistically + significant increase in CD8 TILs compared with oxaliplatin or * 30 anti-CTLA-4 antibody alone (p<0.05, Figure 9)(3). These results effectively demonstrate the applicability for further exploring combination ICD inducer strategies involving immunotherapy. 20 15 Ratio of CD8+ : CD4+/FoxP3+ CD3+CD8+/Viable Single Lymphocytes B. Figure 8: ICD Oxaliplatin and Anti-CTLA-4 Combination Results in 10 Additive TGI TGI reduction: Anti-CTLA-4 vs vehicle p<0.05. Oxaliplatin vs vehicle 0 p<0.01. Combination therapy is additive over single agent therapy Vehicle Anti-CTLA-4 Oxaliplatin Anti-CTLA-4 + alone. Data generated at CrownBio UK. Oxaliplatin 10 5 0 Vehicle Tumor Volume (mm3) Oxaliplatin Anti-CTLA-4 + Oxaliplatin Treatment Treatment Vehicle b.i.w. + vehicle q.w. Anti-CTLA-4 10mg/kg b.i.w. ( ) + vehicle q.w. Oxaliplatin 6mg/kg q.w. ( )+ vehicle q.w. Anti-CTLA-4 10mg/kg b.i.w. ( )+ oxaliplatin 6mg/kg q.w. ( ) 1750 Anti-CTLA-4 Microbiome Analysis of Responder vs Non-Responder Animals 1500 Microbiota play an important role in determining an organism’s response to anticancer treatment, even in tumors far from the gastrointestinal tract, possibly because of their pro-inflammatory properties which activate the immune system. 1250 1000 750 In order to gain insights into the complex interaction between the microbiome and cancer therapy, CrownBio performs fecal collection and microbiome profiling (16S rRNA sequencing) to compare gut microbiomes across our syngeneic models, which we can correlate with response to therapy. 500 250 0 0 5 10 15 20 25 30 Example data is shown in Figure 10 for animals implanted with either CT-26 or 4T1 models, and treated with anti-PD-1 antibody or isotype control. Efficacy studies revealed varying response across different tumor models and within tumor models. Gut microbiome sequencing was performed post dosing and showed that: Study Day Figure 9: ICD Oxaliplatin and Anti-CTLA-4 Combination Results in CD8+ TIL Increase Treatment dosing and regimens as per Figure 8. A: % CD3+/CD8+ T cells, *p<0.05 vs single agent anti-CTLA-4 and oxaliplatin. B: Ratio Teff:Treg. Data generated at CrownBio UK. • the gut microbiome of animals that were responsive to anti-PD-1 treatment differed from animals that were treated with isotype control 40 * 30 20 10 0 Ratio of CD8+ : CD4+/FoxP3+ A. CD3+CD8+/Viable Single Lymphocytes • the gut microbiome of animals that were unresponsive to 15 anti-PD-1 treatment clustered closely with animals that were treated with isotype control (Figure 10)(4). 10 5 0 Vehicle Anti-CTLA-4 Oxaliplatin Treatment Anti-CTLA-4 + Oxaliplatin Vehicle Anti-CTLA-4 Oxaliplatin Anti-CTLA-4 + Oxaliplatin Treatment +1.855.827.6968 | [email protected] | www.crownbio.com ingSyngeneic thethe Effect of of Immune Checkpoint Inhibitors onon Syng rizing Effect Immune Checkpoint Inhibitors Syn Models Factsheet Through GutGut Microbiome Sequencing and Immunophen Through Microbiome Sequencing and Immunoph Figure 10: Gut Microbiome Variation between Responder vs Non-Responder Animals aves, Hooman Izadi,Izadi, Elvira Catherina Talaoc, Andrew Calinisan, Deborah Yan,Yan, Charlene Echegaray, M to Maves, Hooman Elvira Catherina Talaoc, Andrew Calinisan, Deborah Charlene Echegara Efficacy studies: n=8; mean ± SEM. Gut microbiome examined by r16S sequencing of fecal samples collected post last dose of aPD-1 or isotype Jayant Tommy Broudy Jayant Thatte, Tommy Broudy control. In-between sample difference analyzed using pairwise comparisons ofThatte, beta-diversity by unweighted uniFrac metric as displayed by Principal Component Analysis. Taxa abundance at the genus level is represented in stacked columns. Data generated at CrownBio Crown Bioscience Inc., Inc., San San Diego, CA, USA Crown Bioscience Diego, CA, USASan Diego. 4T1 CT26CT26 0 0 10 0 20 T r e a tm e n t d a y s 0 10 10 30 20T r e a tm e n t 20 30 d a y s 30 Treatment Days 1000 30001 0 0 0 Isotype Control Anti-PD-1 Antibody 10mg/kg 1000 2000 0 0 0 ¤ 0 10 10 20 20 T r e a tm Te rnetadtm a yesn t d a y s 30 30 1500 1500 1000 1500 500 0 0 1000 1000 500 500 0 0 3 3 ) 3 1500 2500 2000 0 10 2000 1500 1000 500 0 0 20 T r e a tm e n t d a y s Isotype Control Anti-PD-1 Antibody 10mg/kg Isotype Control Anti-PD-1 Antibody 10mg/kg 2000 1500 1000 500 30 0 10 20 T r e a tm e n t d a y s 0 30 10 20 30 Treatment Days 1000 500 0 0 0 10 10 20 30002 0 Tumor Volume (mm3) 1000 0 0 2500 Tumor Volume (mm3) 2000 2000 T u m o r v o lu m e (m m ) 2000 3 3 T u m o r v o lu m e (m m ) 3 2000 10001 0 0 0 2500 2000 3000 T u m o r v o lu m e (m m ) 3000 2000 u m o r v o lu (mm m e (m 3m) Tumor TVolume 2000 2000 Isotype Control Anti-PD-1 Antibody 10mg/kg Isotype Control Anti-PD-1 Antibody 10mg/kg T u m o r v o lu m e (m m ) 3 2000 Tumor Volume (mm3) T u m o r v o lu m e (m m ) 3 3 03000 00 4T1 4T1 T u m o r v o lu m e (m m ) 3000 3000 T u m o r v o lu m e (m m ) 4 CTLA-4 g otyping d amined s shifts -cross- CT26 3 Tumor Volume (mmVolume ) Tumor (mm3) end the e mmune , atment, h orough o der to DATADATA 30 30 Isotype Control Anti-PD-1 Antibody 10mg/kg T r e a tm T en a yesn t d a y s r et adtm 0 102000 20 30 10 20 30 1000 0 Fig. 1.Fig. Immune Checkpoint Inhibitor Efficacy Studies. In vivo In growth characteristic of CT26 4T1 syngeneic tumor tumor 1. Immune Checkpoint Inhibitor Efficacy Studies. vivo growth characteristic of and CT26 and 4T1 syngeneic t cell lines subcutaneous models. Eight animals in eachingroup with aPD-1 (n), or (n), respective isotypeisotype controls fferent cellinlines in subcutaneous models. Eight animals each were grouptreated were treated with aPD-1 or respective controls Animals were dosed at 10mg/kg on the on indicated treatment days (arrows). Data are displayed as slations (l) after (l)randomization. after randomization. Animals were dosed at 10mg/kg the indicated treatment days (arrows). Data are displayed as Treatment Days Treatmenteach Days as measurements from an individual animal. 0 ¤± The SEM. inlaid 1000 SEM. Thegraph inlaid displays graph displayscurve each curve as measurements from an individual animal. stments mean ±mean 0 10 20 30 dnabled l ividual CT26CT26 4T1 4T1 0 Treatment Days ¤ 0 s models gltrating 10 20 Treatment Days Fig. 3.Fig. Immu 3 lymphocytes lymph populations popula( included. includ hibitor IsotypeIsotype ControlControl aPD-1 aPD-1 IsotypeIsotype ControlControl aPD-1 aPD-1 CON • Respons • Re differsdiff be • Gut• mic Gu treatmen tre control, con unrespon unr that were tha • Immunop • Imm Fig. 2.Fig. Microbiome Sequencing. Gut microbiome was examined by r16S of fecalofsamples collected post last 2. Microbiome Sequencing. Gut microbiome was examined bysequencing r16S sequencing fecal samples collected post last cell popu cel dose ofdose aPD-1 (l) or (l) isotype controlcontrol (l). In-between samplesample difference was analyzed using pairwise comparisons of betae of aPD-1 or isotype (l). In-between difference was analyzed using pairwise comparisons of betascience diversity by unweighted uniFracuniFrac metric metric as displayed by Principal Component Analysis. Taxa abundance at the genus level islevel is diversity by unweighted as displayed by Principal Component Analysis. Taxa abundance at the genus represented in stacked columns. represented in stacked columns. ACKNO AC Many Many than +1.855.827.6968 | [email protected] | www.crownbio.com sequencing seque CrownCrown Bios Syngeneic Models Factsheet Assess Immunotherapy Induced T Cell Infiltration and Immunomodulatory Effects Example FACS immunophenotyping data for the H22 liver model, and IHC immunophenotyping for the A20 lymphoma model are detailed below. Following checkpoint inhibitor or immunotherapy evaluation, CrownBio can perform immune cell profiling to evalute induced T cell infiltration and immuno-modulatory effects. Our techniques include FACS and IHC immunophenotyping, which have been validated with a range of our syngeneic models following checkpoint inhibitor treatment: The H22 model was treated with anti-PD-1 and anti-CTLA-4 antibodies, with response to treatment correlating with an increase in selected tumor infiltrating lymphocytes (TIL) (Figure 11 and Figure 12). T cell infiltration into A20 tumors was analyzed via IHC and immunofluorescence (Figure 13). • FACS immunophenotyping: MBT-2, 4T1, EMT6, CT-26.WT, L1210, H22 ,B16-F10, and Pan02 models • IHC immunophenotyping: A20 Tumor Volume (mm3) Figure 11: H22 Liver Syngeneic Model Responds to Checkpoint Inhibitors: Mean and Individual Response T/C values on Day 21: anti-PD-1 (RMP1-14) 16% (p=0.020); anti-CTLA-4 (9D9) 5% (p=0.012). B, C, D: Individual responses to PBS control, anti-PD-1, and anti-CTLA-4, respectively. Data generated at Crown Bioscience Taicang site. 3000 PBS b.i.w. Anti-PD-1 (RMP1-14) 10mg/kg b.i.w. 2500 Anti-CTLA-4 (9D9) 10mg/kg b.i.w. 2000 1500 1000 500 0 5 7 9 11 13 15 17 19 21 Days post Tumor Inoculation 3000 2000 1000 0 5 7 9 11 13 15 17 Days post Tumor Inoculation 19 21 3000 Anti-PD-1 (RMP1-14) 10mg/kg b.i.w. Anti-CTLA-4 (9D9) 10mg/kg b.i.w. Tumor Volume (mm3) PBS b.i.w. Tumor Volume (mm3) Tumor Volume (mm3) 3000 2000 1000 0 2000 1000 0 5 7 9 11 13 15 17 Days post Tumor Inoculation 19 21 5 7 9 11 13 15 17 19 21 Days post Tumor Inoculation +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Factsheet Figure 12: H22 Liver Syngeneic Model: Response to Checkpoint Abs Correlates with an Increase in Selected TILs FACS result on Day 21: 2 days post the 5th dose. Data generated at Crown Bioscience Taicang site. *p<0.05, **p<0.01, ***p<0.001. 25 20 aPD-1 10mg/kg b.i.w., i.p. IHC (images 20x) of CD4, CD8, CD335, FOXP3, and neutrophils (Ly6G/C) was used to label helper T-cells, cytotoxic T cells, NK, Treg, and neutrophil cells. All IHC assays were run with BondRX Autostainer (Leica) and stained on 4µm FFPE sections of A20 without treatment. IF (image 40x) of CD4 (red) and FOXP3 (green) was stained on frozen sections of the A20 model to label Treg cells (run on Bond RX). DAPI (blue) is used to label the nucleus. aCTLA-4 10mg/kg b.i.w., i.p. 30 * *** *** *** *** 15 10 *** 5 * * *** 0 CD4 CD8 CD335 FOXP3 Neutrophil CD4 FOXP3 DAPI XP 3+ + C D 4+ FO + + + Tumor Infiltrating Immune Cells (% in CD45+ Population) PBS b.i.w., i.p. Figure 13: A20 Tumor T-Cell Infiltration p Value vs Control CD45+ CD3+ CD3+ CD4+ CD3+ CD8+ CD4+FOXP3+ NK MDSC Macrophage Anti-PD-1 10mg/kg 0.082 <0.001 <0.001 <0.001 0.145 0.506 0.056 0.343 Anti-CTLA-4 10mg/kg 0.179 <0.001 <0.001 0.046 <0.001 0.758 0.017 0.028- Standard of Care and Experimental Treatment Data also Available A range of SoC agents, experimental treatments, and combination chemotherapies have been trialed with our syngeneic models (results shown in Table 2). Table 2: Syngeneic Model Standard of Care and Experimental Treatment Data Day: days post-tumor inoculation. Cancer Type Syngeneic Model Treatment T/C (%) p Value Breast 4T1 Paclitaxel Day 27: 75 0.042 Colon CT-26 VEGF-TRAP Day 15: 50 0.007 Cisplatin Day 20: 52 0.002 Oxaliplatin Day 23: 50 <0.01 Doxorubicin Day 21: 23 <0.001 Sorafenib Day 28: 52 0.047 Liver H22 Lymphoma A20 Cyclophosphamide Day 20: 6.4 <0.001 Melanoma B16-BL6 Cisplatin Day 35: 43 0.016 Melanoma B16-F10 Cisplatin Day 28: 30 0.006 Pancreatic Pan02 Gemcitabine Day 21: 58 <0.001 Gemcitabine + cisplatin Day 21: 40 <0.001 Gemcitabine + paclitaxel Day 45: 33 <0.001 +1.855.827.6968 | [email protected] | www.crownbio.com Syngeneic Models Factsheet Fast-Track the In Vivo Screening of Immunotherapy Compounds Full characterization including immunoprofiling, NGS, and checkpoint inhibitor benchmarking allows rapid selection of appropriate models for client studies. Immunomodulatory effects of novel agents can be evaluated through assessment of immunotherapy induced T cell infiltration, validated for a range of models. Our models are also available for a wide variety of agent assessment from checkpoint inhibitors to other immnunotherapeutics including bacterial, viral, and vaccination research. For immunotherapeutic agents, in vitro screening is not the optimum approach for evaluating PD effect and/or efficacy across multiple cancer types. However, as an alternative, large-scale, parallel, in vivo screening of syngeneic models can provide a cost effective approach. CrownBio are therefore utilizing our syngeneic platform to offer a unique large scale MuScreen to fast track immunotherapy treatment strategies, the first platform of its type. MuScreen can be used for both single agent and combination studies, reducing variability and improving screening efficiency. We provide a syngeneic efficacy screening panel and tumor microarrays to fit your research needs. For further information please consult the MuScreen FactSheet available from the CrownBio website: www.crownbio.com/ publications/factsheets/. Conclusions Immunotherapy research and agents such as anti-PD-1 antibodies are showing considerable success in oncology; providing both patient benefits and commercial success for the pharmaceutical industry. However, progress in the field is hindered through a lack of experimental immunotherapy models featuring a fully competent immune system. Syngeneic models (allografts derived from immortalized mouse cancer cell lines, which originated from the same inbred strain of mice) are a simple way to evaluate novel immunotherapy treatments through eliciting an immune response, in fully immunocompetent mice. CrownBio has validated a large panel of syngeneic models, covering a variety of cancer types, with a commitment to further extend this model selection. Alongside subcutaneous models, bioluminescent imaging of orthotopic and metastatic tumous allows more clinically relevant stromal interactions to be modeled and investigated. Contact Sales US: +1.855.827.6968 UK: +44 (0)870 166 6234 [email protected] Version 3.0 As immunotherapies are combined with chemotherapy and targeted agents, in an effort to extend patient survival, CrownBio is also utilizing its wide ranging Syngeneic Panel to interrogate different combinations including with inducers of ICD and can offer a large scale MuScreen to fast-track strategies. References Zhang L, Zhang J, Guo S et al. RNAseq and immune profiling analysis of syngeneic mouse models treated with immune checkpoint inhibitors enable biomarker discovery and model selection for cancer immunotherapy. [abstract]. In: Proceedings of the AACR-NCI-EORTC International Conference: Molecular Targets and Cancer Therapeutics; 2015 Nov 5-9; Boston, MA. Philadelphia (PA): AACR; Molecular Cancer Therapeutics 2015;14(12 Suppl 2): Abstract nr A6. 2 Zhang L, Zhang J, Guo S et al. RNAseq and FACS profiling of syngeneic mouse models treated with immune checkpoint inhibitors enable biomarker discovery and model selection for cancer immunotherapy [abstract]. In: Proceedings of the 107th Annual Meeting of the American Association for Cancer Research; 2016 Apr 16-20; New Orleans, LA. Philadelphia (PA): AACR; Cancer Research 2016;76(14 Suppl): Abstract nr5177. 3 Mckenzie A, Kumari R, Shi Q et al. Immune competent syngeneic models demonstrate additive effects of combination strategies using checkpoint immunotherapy and inducers of immunogenic cell death (ICD). [abstract]. In: Proceedings of the 107th Annual Meeting of the American Association for Cancer Research; 2016 Apr 16-20; New Orleans, LA. Philadelphia (PA): AACR; Cancer Research 2016;76(14 Suppl): Abstract nr 3994. 4 Kato Maves Y, Izadi H, Talaoc EC et al. Characterizing the effect of immune checkpoint inhibitors on syngeneic tumor models through gut microbiome sequencing and immunophenotyping [abstract].. In: Proceedings of the 28th EORTC-NCI-AACR Symposium: Molecular Targets and Cancer Therapeutics; 2016 Nov 29 – Dec 02; Munich, Germany: European Journal of Cancer 2016;69: S111. 1 Schedule Scientific Consultation Request a consultation to discuss your project. [email protected] Explore Scientific Data Log into MuBase to review syngeneic model data. mubase.crownbio.com +1.855.827.6968 | [email protected] | www.crownbio.com
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