Mendel & Genetics Gregor Mendel: "father of genetics" Blending Theory of Inheritance - offspring of two parents "blend" the traits of both parents Particulate Theory of Inheritance - traits are inherited as "particles", offspring receive a "particle" from each parent. Evidence for Particulate Theory of Inheritance: A plant with purple flowers is crossed with another plant that has purple flowers. Some of the offspring have white flowers (wow!). Mendel set out to discover how this could happen. Some stuff on Mendel parents were farmers he became ordained as a priest studied science and mathemathics at the University of Vienna Mendel's Experiments Mendel chose pea plants as his experimental subjects, mainly because they were easy to cross and showed a variety of contrasting traits (purple vs white flowers, tall vs short stems, round vs wrinkled seeds) 1. Mendel chose true-breeding lines of each plant/trait he studied (true breeding lines always produced offspring of the same type) 2. He crossed a true breeding plant with a plant of the opposite trait (purple x white). He called this the Parental (P) generation. (In this case, he cross-pollinated the plants) 3. He recorded data on the offspring of this cross (First Filial, F1) 4. He self-pollinated the F1 offspring 5. He recorded data on the offspring of the second generation, calling it the Second Filial generation (F2) Analysis: The F1 generation always displayed one trait (he later called this the dominant trait) The F1 generation must have within it the trait from the original parents - the white trait The F2 generation displayed the hidden trait, 1/4 of the F2 generation had it (he later called this hidden trait the recessive trait) Each individual has two "factors" that determine what external appearance the offspring will have. (We now call these factors genes or alleles) Parent Generation - the two organisms whose genes produce offspring. F1 generation - the offspring from parents. F2 generation - the offspring produced by crossing two F1 individuals Mendel established three principles (or Laws) from his research 1. The Principle of Dominance and Recessiveness - one trait is masked or covered up by another trait 2. Principle of Segregation - the two factors (alleles) for a trait separate during gamete formation 3. Principle of Independent Assortment factors of a trait separate independently of one another during gamete formation; another way to look at this is, whether a flower is purple has nothing to do with the length of the plants stems - each trait is independently inherited Modern Genetics Gene - a segment of DNA on a chromosome that controls a particular trait. Mendel's factors are now called ALLELES. For every trait a person have, two alleles determine how that trait is expressed. Allele - any of the several alternative forms of a Gene.T and t each are alleles of each other. We use letters to denote alleles, since every gene has two alleles, all genes can be represented by a pair of letters. PP = purple, Pp = purple, pp = white Homozygous(Pure breed): when the alleles are the same, the individual is said to be homozygous, or true breeding. Letters designating a homozgyous individual could be capital or lowercase, as long as they are the same. Ex. AA, bb, EE, dd Heterozygous (Hybrid): when the alleles are different, in this case the DOMINANT allele is expressed. Ex. Pp, Aa Monohybrid cross = a cross involving one pair of contrasting traits. Punnet Square: used to determine the PROBABILITY of having a certain type of offspring given the alleles of the parents Genotype: letters used to denote alleles (Examples: BB, Pp, CcTt) Phenotype: what an organism looks like (brown, purple..) To understand genetics, one must understand probabilities The traits that are passed from parents to offspring are determined by the combination of genes that are in the gametes. This is a random event in nature. The probability of a particular event occurring is the fraction of outcomes in which that event occurs. What is the probability of the number 5 coming up when a dice is rolled? A single roll of a dice has the possible outcomes 1, 2, 3, 4, 5, 6. There are a total of 6 possible outcomes, one of those being the number 5. The probability of the number 5 coming up is 1/6. What is the probability of rolling an even number with a dice? The even numbers are 2, 4, 6. 1 Each of these has a /6 chance of occurring. This gives us three chances in six of rolling an even number. 3/6 = ½ How to Use Punnett Squares to Determine Probability In pea plants, round seeds are dominant to wrinkled. Assign genotypes: RR = round R r = round r r = wrinkled If two heterozygous plants are crossed (R r x R r ), set up the square as shown below. In this case 25% of the offspring will be wrinkled, and 75 % will be round. Dihybrid cross - a cross between individuals with two pairs of contrasting traits. Ex. PpTt x PpTt Dihybrid Crosses: These type of crosses can be challenging to set up, and the square you create will be 4x4. This simple guide will walk you through the steps of solving a typical dihybrid cross common in genetics. The method can also work for any cross that involves two traits. Consider this cross A pea plant that is heterozygous for round, yellow seeds is self-fertilized, what are the phenotypic ratios of the resulting offspring? Step 1: Determine the parental genotypes from the text above, the word "heterozygous" is the most important clue, and you would also need to understand that self fertilized means you just cross it with itself. R r Y y xR r Y y Step 2: Determine the gametes. This might feel a little like the FOIL method you learned in math class. Combine the R's and Ys of each parent to represent sperm and egg. Do this for both parents Gametes after "FOIL" RY, Ry, rY, ry (parent 1) and RY, Ry, rY, ry (parent 2) Step 3: Set up a large 4x4 Punnet square, place one gamete set from the parent on the top, and the other on the side Step 4: Write the genotypes of the offspring in each box and determine how many of each phenotype you have. In this case, you will have 9 round, yellow; 3 round, green; 3 wrinkled, yellow; and 1 wrinkled green Some Shortcuts In any case where the parents are heterozygous for both traits (AaBb x AaBb) you will always get a 9:3:3:1 ratio. 9 is the number for the two dominant traits, 3 is the number for a dominant/recessive combination, and only 1 individual will display both recessive traits. Another way to determine the ratios is to do it mathematically 3/4 of all the offspring will have round seeds 3/4 of all the offspring will have yellow seeds 3/4 x 3/4 = 9/16 will have round, yellow seeds. Crosses that Involve 2 Traits Consider: R r Y y x r r y y The square is set up as shown You might notice that all four rows have the same genotype. In this case, you really only need to fill out the top row, because 1/4 is the same thing as 4/16 INCOMPLETE DOMINANCE: ONE TRAIT IS NOT COMPLETELY DOMINANT OVER THE OTHER, SO BOTH TRAITS ARE EXPRESSED AT THE SAME TIME IN THE HETEROZYGOUS CONDITION CODOMINANCE: NEITHER TRAIT IS DOMINANT OVER THE OTHER…SO BOTH ARE EXPRESSED AT THE SAME TIME INHERITANCE OF TRAITS Heredity: passing traits from one generation to the next. Polygenic traits: controlled by two or more genes. Skin and eye color are both influenced by the additive effects of from three to six genes. Multiple-allele traits: controlled by three or more alleles of the same gene. Human blood type is an example. There are three forms of the blood type gene, IA, IB, and i (IO). An individual's blood type is determined by two of the three genes. Blood Type Rh Type O + O - A + A B B AB AB + + - How Many Have Percentag It e 37.4 1 person in 3 % 44% 1 person in 15 6.6% 35.7 1 person in 3 % 42% 1 person in 16 6.3% 1 person in 12 8.5% 10% 1 person in 67 1.5% 1 person in 29 3.4% 4% 1 person in 167 .6% Sex-linked traits: genes located on a sex chromosome. Genes on the X chromosome are X-linked & genes on the Y chromosome are Y-linked. Genes are X-linked, males are much more likely to show recessive traits since there is no complementary gene on the Y chromosome. (Color blindness & hemophilia) Sex-influenced traits: located on autosomes, but express themselves differently in the sexes because of sex hormones. (Pattern baldness) Important Terms you should already know: Law of Dominance: Within any characteristic one allele appears more often than the other. Gives appearance that allele is stronger and other weak…but, it has nothing to do with strength. The dominant allele is naturally selected to appear more often than the other allele. Dominant: the gene that is expressed. Recessive: the gene that is hidden…only seen in homozygous condition. New Terms Pleiotropy: A gene can sometimes affect another characteristic. This ability of having multiple effects is called pleiotropy. Genes that control fur pigmentation in cats may have an influence on the cats eyes and brain. Epistasis: One gene may interfere with the expression of another gene that is independently inherited. In flower color a P is required for it to exhibit purple color. PP and Pp = purple colored flowers. This can only happen if a dominant allele is present for another characteristic. PPCc =purple Ppcc = white. The C characteristic has an effect on the color of the flower. Polygenic Traits: Quantitative traits or having 3 sets of alleles for a characteristic. Skin color is polygenic. There are 6 genes responsible for this characteristic. BBBBBB= Very dark pigmentation where as bbbbbb = the opposite very light pigmentation. All the other genotypes are intermediates of these combinations. Epigenetics – Test cross – is the crossing of an individual of unknown genotype with a homozygous recessive individual to determine the unknown genotype.
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