1
Table S1. Genes showed alterations in expression in the skin of Lhx2–/– mice versus wild-type controls in microarrays and association of
Lhx2 with the corresponding promoter regions in ChIP-on-chip assay
Adhesion/extracellular matrix
Gene full name
Accession Number
Fold change
ChIP on chip: distance to TSS
(nearest peak) (bp)
PERP; TP53 apoptosis effector
desmocollin 1
ADAMTS-like 1
multimerin 1
collagen; type IX; alpha 1
Usher syndrome 2A (autosomal recessive; mild) homolog (human)
fibrinogen-like protein 1
sialic acid binding Ig-like lectin H
contactin 3
NM_022032
NM_013504
NM_029967
XM_284198
NM_007740
NM_021408
AK083397
NM_178706
NM_008779
-11.02
-4.38
-2.87
-2.6
-2.47
-2.3
-2.04
-1.91
-1.84
-7081
-991
-5027
-3368
-4226
-117
-8158
-117
-117
Fgg
Ibsp
C8b
Crp
Gja3
Cldn8
Nrxn1
A2m
Vit
F11
fibrinogen gamma chain
integrin binding sialoprotein
complement component 8; beta polypeptide
C-reactive protein; pentraxin-related
gap junction protein; alpha 3
claudin 8
neurexin I
alpha-2-macroglobulin
Vitrin
coagulation factor XI
NM_133862
NM_008318
NM_133882
NM_007768
AK053849
NM_018778
NM_020252
NM_175628
NM_028813
NM_028066
44.77
40.38
31.22
28.1
27.24
22.23
21.92
20.61
20.3
16.12
-1125
4505
142
-3270
-117
59979
4692
-117
2310
1606
Gpm6a
Col10a1
Col19a1
Fgb
Rhag
Anks1b
Upk2
Spp1
Pcdhb7
glycoprotein m6a
collagen; type X; alpha 1
collagen; type XIX; alpha 1
fibrinogen beta chain
Rhesus blood group-associated A glycoprotein
ankyrin repeat and sterile alpha motif domain containing 1B
uroplakin 2
secreted phosphoprotein 1
protocadherin beta 7
S65735
NM_009925
NM_007733
NM_181849
NM_011269
XM_001003400
NM_009476
NM_009263
NM_053132
14.01
13.52
13.24
12.33
12.16
11.57
11.22
10.24
10.2
-9739
801
-353
-1427
-4645
-117
-117
-5677
225
Gene symbol
Downregulated
Perp
Dsc1
Adamtsl1
Mmrn1
Col9a1
Ush2a
Fgl1
Siglech
Cntn3
Upregulated
2
Vnn1
vanin 1
NM_011704
9.88
148250
Olfml2b
Clec14a
Fat4
Cdh22
Clec4a2
Tnn
Cntnap2
Lrfn5
Thbs4
C6
Gja5
Cfhr1
Cdh20
Alb
Ctnna2
Gp2
Fcgr1
Kera
Vsig4
Lrrn1
Siglec1
Cldn17
Nphs1
Cntn6
Pcdhb15
Lum
Lypd1
Vcan
Mug1
Pcdh20
Pcdhb6
Cdh17
Lrrc33
Cd84
Vsig1
Itm2a
olfactomedin-like 2B
C-type lectin domain family 14; member a
FAT tumor suppressor homolog 4 (Drosophila)
cadherin 22
C-type lectin domain family 4; member a2
tenascin N
contactin associated protein-like 2
leucine rich repeat and fibronectin type III domain containing 5
thrombospondin 4
complement component 6
gap junction protein; alpha 5
complement factor H-related 1
cadherin 20
Albumin
catenin (cadherin associated protein); alpha 2
glycoprotein 2 (zymogen granule membrane)
Fc receptor; IgG; high affinity I
Keratocan
V-set and immunoglobulin domain containing 4
leucine rich repeat protein 1; neuronal
sialic acid binding Ig-like lectin 1; sialoadhesin
claudin 17
nephrosis 1 homolog; nephrin (human)
contactin 6
protocadherin beta 15
Lumican
Ly6/Plaur domain containing 1
Versican
murinoglobulin 1
protocadherin 20
protocadherin beta 6
cadherin 17
leucine rich repeat containing 33
CD84 antigen
V-set and immunoglobulin domain containing 1
integral membrane protein 2A
NM_177068
NM_025809
AK034552
NM_174988
NM_011999
NM_177839
NM_025771
AK083920
NM_011582
NM_016704
NM_008121
NM_015780
NM_011800
NM_009654
NM_009819
NM_025989
NM_010186
NM_008438
NM_177789
NM_008516
NM_011426
NM_181490
NM_019459
NM_017383
NM_053140
NM_008524
NM_145100
AK087780
NM_008645
NM_178685
NM_053131
NM_019753
NM_146069
NM_013489
NM_030181
NM_008409
9.69
8.61
8.04
7.96
7.34
7.2
7.2
7.17
6.98
6.18
5.83
5.79
5.75
5.4
5.37
5.09
4.97
4.87
4.34
4.34
3.88
3.7
3.36
3.17
3.05
2.83
2.69
2.54
2.53
2.45
2.44
2.31
2.22
2.2
2.1
2.06
-1687
-117
-117
2293
-186
-5025
-117
-598
-117
-117
-117
-3372
-117
-4057
-117
-117
-7197
-4868
-8131
1566
745
83280
2927
-2476
638
-4868
-5818
7703
394
2440
725
-117
670
-4331
-117
-7212
3
Siglec5
sialic acid binding Ig-like lectin 5
NM_145581
1.74
2219
Apoptosis
Gene full name
Accession
Number
Fold
change
ChIP on chip: distance to TSS
(nearest peak) (bp)
Bcl2l14
BCL2-like 14 (apoptosis facilitator)
NM_025778
6.73
-3910
Xrn1
5'-3' exoribonuclease 1
NM_011916
3.57
971
Casp1
caspase 1
NM_009807
2.72
-734
Gene symbol
Upregulated
Cell cycle
Gene full name
Accession Number
Fold
change
ChIP on chip: distance to TSS
(nearest peak) (bp)
p21 protein (Cdc42/Rac)-activated kinase 3
NM_008778
-2.93
-117
Sesn1
sestrin 1
NM_001013370
5.01
9048
Dbc1
deleted in bladder cancer 1 (human)
NM_019967
4.38
-4295
Cgrrf1
cell growth regulator with ring finger domain 1
NM_026832
1.97
-7155
Gene full name
Accession Number
Fold
change
ChIP on chip: distance to TSS
(nearest peak) (bp)
small proline-rich protein 2D
Loricrin
late cornified envelope 1C
late cornified envelope 1A2
dynein; axonemal; light chain 1
late cornified envelope 1I
dynein; axonemal; heavy chain 9
myozenin 3
NM_011470
NM_008508
NM_028622
NM_028625
NM_028821
NM_029667
AK044263
NM_133363
-53.58
-20.32
-17.78
-11.1
-7.76
-4.82
-4.65
-3.93
2468
-4374
-117
-4374
195
34966
113910
-1371
Gene symbol
Downregulated
Pak3
Upregulated
Cytoskeleton/cell differentiation and motility
Gene symbol
Downregulated
Sprr2d
Lor
Lce1c
Lce1a2
Dnalc1
Lce1i
Dnahc9
Myoz3
4
Gabarapl1
Lce1h
Lce1e
Krtap13
Dnahc11
Strn
gamma-aminobutyric acid (GABA) A receptor-associated
protein-like 1
late cornified envelope 1H
late cornified envelope 1E
keratin associated protein 13
dynein; axonemal; heavy chain 11
striatin; calmodulin binding protein
NM_020590
NM_026335
NM_026811
NM_010671
NM_010060
AK032712
-3.88
-3.68
-3
-2.86
-2.13
-1.97
127
-1897
-4374
-2785
-117
-2243
NM_030203
NM_009215
NM_133730
NM_013675
AK133727
NM_183189
NM_010855
NM_010672
NM_172673
NM_010087
NM_011652
AK081454
NM_009898
NM_028621
NM_025524
NM_010616
NM_001038710
NM_028915
NM_172951
NM_130873
NM_053098
NM_009664
NM_026319
NM_001077694
NM_011848
47.7
44.49
27.08
20.29
19.75
17.84
16.78
12.89
12.89
12.26
9.61
9.56
9.48
8.54
8.27
6.59
6.42
6.25
6.24
6.21
5.83
5.08
4.7
4.03
3.84
3124
-7301
5286
743
-4100
-21
-227
-19039
-5534
-1558
-2619
-4146
-2738
6448
-3430
-4002
10677
3027
-5489
-2
398
-3134
4772
-22
-618
Upregulated
Tspyl4
Sst
Krt25
Spnb1
Krtap8-1
Krtap13-1
Myh4
Krtap6-1
Frmd5
Dtna
Ttn
Eya4
Coro1a
Krtap16-7
Krtap3-3
Kif12
Tmod2
Lrrcc1
Sntg2
Krtap16-4
Lmod2
Ambn
Ift74
Dysf
Nek3
TSPY-like 4
Somatostatin
keratin 25
spectrin beta 1
keratin associated protein 8-1
keratin associated protein 13-1
myosin; heavy polypeptide 4; skeletal muscle
keratin associated protein 6-1
FERM domain containing 5
dystrobrevin alpha
Titin
eyes absent 4 homolog (Drosophila)
coronin; actin binding protein 1A
keratin associated protein 16-7
keratin associated protein 3-3
kinesin family member 12
tropomodulin 2
leucine rich repeat and coiled-coil domain containing 1
syntrophin; gamma 2
keratin associated protein 16-4
leiomodin 2 (cardiac)
Ameloblastin
intraflagellar transport 74 homolog (Chlamydomonas)
Dysferlin
NIMA (never in mitosis gene a)-related expressed kinase
3
5
3
Wasf1
Scin
Ndn
Myot
Odam
Fmn2
Spnb2
Myl1
Fez1
Snca
Tubb2b
Lce1l
Nedd9
Klhl1
WASP family 1
Scinderin
Necdin
Myotilin
odontogenic; ameloblast associated
formin 2
spectrin beta 2
myosin; light polypeptide 1
fasciculation and elongation protein zeta 1 (zygin I)
synuclein; alpha
tubulin; beta 2B
late cornified envelope 1L
neural precursor cell expressed; otherally downregulated gene 9
kelch-like 1 (Drosophila)
NM_031877
NM_009132
NM_010882
NM_001033621
NM_027128
NM_019445
NM_175836
NM_021285
BC029629
NM_001042451
NM_023716
NM_028628
3.69
3.19
3.13
2.82
2.64
2.54
2.33
2.27
2.25
2.08
2.05
1.84
7624
-5378
-117
2215
-1293
4916
-232
-8043
-1082
-89
-3258
-2202
NM_017464
NM_053105
1.81
1.7
2954
-117
Metabolism
Gene symbol
Gene full name
Accession Number
Fold change
ChIP on chip:
distance to TSS
(nearest peak)
(bp)
hemoglobin Y; beta-like embryonic chain
cholesterol 25-hydroxylase
HECT; C2 and WW domain containing E3 ubiquitin
protein ligase 2
solute carrier family 4; sodium bicarbonate
cotransporter; member 7
solute carrier family 7 (cationic amino acid transporter;
y+ system); member 11
phosphodiesterase 4B; cAMP specific
lipase; family member M
ATP-binding cassette; sub-family A (ABC1); member 5
RIKEN cDNA A930038C07 gene
NM_008221
NM_009890
-172.94
-21.22
-4061
-4679
NM_172655
-18.3
-6410
NM_001033270
-13.27
-117
NM_011990
NM_019840
NM_023903
NM_147219
NM_172399
-11.27
-7.09
-5.67
-4.62
-4.51
-117
142
-13613
3156
-137
Downregulated
Hbb-y
Ch25h
Hecw2
Slc4a7
Slc7a11
Pde4b
Lipm
Abca5
A930038C07Rik
6
Dse
Lipk
Slc15a2
Adss
Hebp2
Fut9
Neu3
Hdhd1a
Rnf133
Esd
Has1
Mast4
Lnpep
Hba-a1
Agpat5
Parp8
Vat1
Lamp3
dermatan sulfate epimerase
lipase; family member K
solute carrier family 15 (H+/peptide transporter);
member 2
adenylosuccinate synthetase; non muscle
heme binding protein 2
fucosyltransferase 9
neuraminidase 3
haloacid dehalogenase-like hydrolase domain
containing 1A
ring finger protein 133
esterase D/formylglutathione hydrolase
hyaluronan synthase1
microtubule associated serine/threonine kinase family
member 4
leucyl/cystinyl aminopeptidase
hemoglobin alpha; adult chain 1
1-acylglycerol-3-phosphate O-acyltransferase 5
(lysophosphatidic acid acyltransferase; epsilon)
poly (ADP-ribose) polymerase family; member 8
vesicle amine transport protein 1 homolog (T californica)
lysosomal-associated membrane protein 3
NM_172508
NM_172837
-4.26
-4.21
-4146
-117
NM_021301
NM_007422
NM_019487
NM_010243
NM_016720
-4.04
-2.75
-2.67
-2.61
-2.6
-353
-1712
-673
-7531
-117
NM_026108
NM_198251
NM_016903
NM_008215
-2.48
-2.34
-2.2
-2.15
-2715
-749
-117
-117
AK090136
NM_172827
NM_008218
-2.01
-1.93
-1.91
1246
-4549
-4127
NM_026792
NM_001081009
NM_012037
NM_177356
-1.83
-1.83
-1.83
-1.8
-6778
-2834
1046
-6370
NM_053115
NM_007815
NM_009892
NM_054094
NM_011260
NM_008096
NM_030611
117.3
103.33
103.33
62.5
58.45
50.83
45.63
-117
-8500
-547
-1303
-117
-1097
-4900
NM_011387
NM_144903
NM_009513
42.05
38.24
37.61
-117
3690
-337
Upregulated
Acox2
Cyp2c29
Chi3l3
Acsm1
Reg3g
Gc
Akr1c6
Slc10a1
Aldob
Nrsn1
acyl-Coenzyme A oxidase 2; branched chain
cytochrome P450; family 2; subfamily c; polypeptide 29
chitinase 3-like 3
acyl-CoA synthetase medium-chain family member 1
regenerating islet-derived 3 gamma
group specific component
aldo-keto reductase family 1; member C6
solute carrier family 10 (sodium/bile acid cotransporter
family); member 1
aldolase B; fructose-bisphosphate
neurensin 1
7
Gsta3
Car1
Gulo
Cyp2c70
Cyp3a16
Chi3l4
Otor
Cyp1b1
Cyp2e1
Slc9a2
Bbox1
Gucy1b3
Fmo5
Sult1d1
Lctl
Cp
Dpysl4
Gucy1a3
Magel2
Clec5a
Trdn
Necab1
6430573F11Rik
Chia
Olfm3
Abat
Wscd1
Slc40a1
Hpgd
Lipf
St8sia3
glutathione S-transferase; alpha 3
carbonic anhydrase 1
gulonolactone (L-) oxidase
cytochrome P450; family 2; subfamily c; polypeptide 70
cytochrome P450; family 3; subfamily a; polypeptide 16
chitinase 3-like 4
Otoraplin
cytochrome P450; family 1; subfamily b; polypeptide 1
cytochrome P450; family 2; subfamily e; polypeptide 1
solute carrier family 9 (sodium/hydrogen exchanger);
member 2
butyrobetaine (gamma); 2-oxoglutarate dioxygenase 1
(gamma-butyrobetaine hydroxylase)
guanylate cyclase 1; soluble; beta 3
flavin containing monooxygenase 5
sulfotransferase family 1D; member 1
lactase-like
Ceruloplasmin
dihydropyrimidinase-like 4
guanylate cyclase 1; soluble; alpha 3
melanoma antigen; family L; 2
C-type lectin domain family 5; member a
Triadin
N-terminal EF-hand calcium binding protein 1
RIKEN cDNA 6430573F11 gene
chitinase; acidic
olfactomedin 3
4-aminobutyrate aminotransferase
WSC domain containing 1
solute carrier family 40 (iron-regulated transporter);
member 1
hydroxyprostaglandin dehydrogenase 15 (NAD)
lipase; gastric
ST8 alpha-N-acetyl-neuraminide alpha-2;8sialyltransferase 3
NM_001077353
NM_009799
NM_178747
NM_145499
NM_007820
NM_145126
NM_020595
NM_009994
NM_021282
37.32
36.34
34.9
34.21
34.12
32.66
30.92
30.75
30.2
-3971
-2202
-1205
471
-2272
-547
-2493
-1843
479
AK077026
29.79
-13136
NM_130452
NM_017469
NM_010232
NM_016771
NM_145835
NM_007752
NM_011993
NM_021896
AK086725
NM_021364
ENSMUST00000050626
NM_178617
NM_176952
NM_023186
NM_153157
AK083062
NM_177618
24.99
24.55
24.35
21.1
19.72
18.1
17.04
16.97
15.3
14.83
14.5
14.1
14.09
12.68
12.39
11.75
11.68
749
-117
-501
-238
2219
-3046
1975
-1427
-117
-117
3124
447
-36090
-4728
-3697
-1291
-5824
NM_016917
NM_008278
NM_026334
NM_009182
11.03
10.37
9.89
8.67
-117
14250
-3183
-2528
8
sialyltransferase 3
Aadac
Sult1c2
Fmo1
Pik3c2g
Kctd8
Kel
Cyp4x1
Arsb
Ampd1
Hyal5
Chodl
Kynu
Aldh1a1
Plce1
Sulf1
Alox5
Sucnr1
Dpyd
St8sia5
Has2
Fabp7
Pcp4
Cyp2d22
Hs3st1
Plscr2
G6pc2
Galnt5
Dhrs7c
Aldh1a2
Mgll
arylacetamide deacetylase (esterase)
sulfotransferase family; cytosolic; 1C; member 2
flavin containing monooxygenase 1
phosphatidylinositol 3-kinase; C2 domain containing;
gamma polypeptide
potassium channel tetramerisation domain containing 8
Kell blood group
cytochrome P450; family 4; subfamily x; polypeptide 1
arylsulfatase B
adenosine monophosphate deaminase 1
hyaluronoglucosaminidase 5
Chondrolectin
kynureninase (L-kynurenine hydrolase)
aldehyde dehydrogenase family 1; subfamily A1
phospholipase C; epsilon 1
sulfatase 1
arachidonate 5-lipoxygenase
succinate receptor 1
dihydropyrimidine dehydrogenase
ST8 alpha-N-acetyl-neuraminide alpha-2;8sialyltransferase 5
hyaluronan synthase 2
fatty acid binding protein 7; brain
Purkinje cell protein 4
cytochrome P450; family 2; subfamily d; polypeptide 22
heparan sulfate (glucosamine) 3-O-sulfotransferase 1
phospholipid scramblase 2
glucose-6-phosphatase; catalytic; 2
UDP-N-acetyl-alpha-D-galactosamine:polypeptide Nacetylgalactosaminyltransferase 5
dehydrogenase/reductase (SDR family) member 7C
aldehyde dehydrogenase family 1; subfamily A2
monoglyceride lipase
NM_023383
NM_026935
AK034946
8.65
8.39
8.33
-3791
-3611
-5446
NM_207683
NM_175519
NM_032540
AK038526
NM_009712
NM_001033303
NM_028957
NM_139134
NM_027552
NM_013467
NM_019588
NM_172294
NM_009662
NM_032400
NM_170778
7.43
6.79
6.75
6.5
6.47
6.45
6.3
6.08
5.77
5.67
5.49
5.47
5.2
5.01
5
340
-117
771
447
-3651
-7318
-4031
3343
-6005
-117
-117
-4622
2170
-3791
-3904
NM_153124
NM_008216
NM_021272
NM_008791
NM_019823
NM_010474
NM_008880
NM_021331
4.87
4.79
4.74
4.67
4.6
4.48
4.47
4.37
-5750
-2619
-3103
-716
-117
-3677
-117
2835
ENSMUST00000028171
AK003267
NM_009022
NM_011844
4.14
3.94
3.94
3.65
4175
-5574
-4295
-22
9
Mamdc2
Galnt13
Slc43a1
0610007P08Rik
Pcca
Sardh
Asf1b
Ugt2a3
Mlana
Adh1
Pomt2
Mdh1b
Large
Dlat
Dclk3
Clca3
Steap4
Snx7
Ppt1
Slc12a6
Hck
Neu2
Fh1
Aldh6a1
Oat
Hsd17b11
Phactr1
Ndufb7
Cyp2r1
Cryl1
Ddc
MAM domain containing 2
UDP-N-acetyl-alpha-D-galactosamine:polypeptide Nacetylgalactosaminyltransferase 13
solute carrier family 43; member 1
RIKEN cDNA 0610007P08 gene
propionyl-Coenzyme A carboxylase; alpha polypeptide
sarcosine dehydrogenase
ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
UDP glucuronosyltransferase 2 family; polypeptide A3
melan-A
alcohol dehydrogenase 1 (class I)
protein-O-mannosyltransferase 2
malate dehydrogenase 1B; NAD (soluble)
like-glycosyltransferase
dihydrolipoamide S-acetyltransferase (E2 component of
pyruvate dehydrogenase complex)
doublecortin-like kinase 3
chloride channel calcium activated 3
STEAP family member 4
sorting nexin 7
palmitoyl-protein thioesterase 1
solute carrier family 12; member 6
hemopoietic cell kinase
neuraminidase 2
fumarate hydratase 1
aldehyde dehydrogenase family 6; subfamily A1
ornithine aminotransferase
hydroxysteroid (17-beta) dehydrogenase 11
phosphatase and actin regulator 1
NADH dehydrogenase (ubiquinone) 1 beta subcomplex;
7
cytochrome P450; family 2; subfamily r; polypeptide 1
crystallin; lambda 1
dopa decarboxylase
NM_174857
3.57
1013
NM_173030
NM_001081349
NM_001013608
NM_144844
NM_138665
NM_024184
NM_028094
CF723683
NM_007409
NM_153415
NM_029696
NM_010687
3.55
3.47
3.4
3.16
3.14
3
2.98
2.83
2.74
2.7
2.61
2.6
-1791
-3460
-4619
-117
-3906
2861
-2593
-31957
-4883
-117
-2979
-492
NM_145614
NM_172928
NM_017474
NM_054098
NM_029655
NM_008917
NM_133649
NM_010407
NM_015750
NM_010209
NM_134042
NM_016978
NM_053262
NM_001005748
2.59
2.53
2.52
2.45
2.42
2.41
2.36
2.35
2.34
2.33
2.32
2.3
2.3
2.27
-117
-2640
3968
597
-7968
2431
-1603
-1240
25441
3587
-117
-3471
4811
-362
NM_025843
NM_177382
NM_030004
NM_016672
2.15
2.11
2.09
2.04
-5752
320
-4204
130233
10
St8sia4
Enox1
Mtmr7
Itih5
Enpp2
Dgkk
Pdia5
Loxl3
Hsd17b4
Retnlg
Gnb3
Slc16a12
ST8 alpha-N-acetyl-neuraminide alpha-2;8sialyltransferase 4
ecto-NOX disulfide-thiol exchanger 1
myotubularin related protein 7
inter-alpha (globulin) inhibitor H5
ectonucleotide pyrophosphatase/phosphodiesterase 2
diacylglycerol kinase kappa
protein disulfide isomerase associated 5
lysyl oxidase-like 3
hydroxysteroid (17-beta) dehydrogenase 4
resistin like gamma
guanine nucleotide binding protein (G protein); beta 3
solute carrier family 16 (monocarboxylic acid
transporters); member 12
NM_009183
NM_172813
NM_001040699
NM_172471
NM_015744
AK081332
NM_028295
NM_013586
NM_008292
NM_181596
NM_013530
2.02
2.01
1.98
1.94
1.94
1.94
1.82
1.82
1.76
1.75
1.73
-3676
-117
-3341
-5114
-117
1336
-7910
-127
-7019
1424
-1904
NM_172838
1.7
-117
Proteolysis
Gene symbol
Gene full name
Accession Number
Fold change
ChIP on chip:
distance to TSS
(nearest peak) (bp)
membrane metallo endopeptidase
serine (or cysteine) peptidase inhibitor; clade B;
member 6c
serine (or cysteine) peptidase inhibitor; clade B
(ovalbumin); member 11
carboxypeptidase A6
RIKEN cDNA 4930486L24 gene
serine (or cysteine) peptidase inhibitor; clade B;
member 9
C-type lectin domain family 4; member d
a disintegrin and metallopeptidase domain 29
RAB5A; member RAS oncogene family
a disintegrin and metallopeptidase domain 32
v-abl Abelson murine leukemia viral oncogene
homolog 2 (arg; Abelson-related gene)
serine (or cysteine) peptidase inhibitor; clade B
(ovalbumin); member 13
NM_008604
-18.44
-15628
AF425084
-10.52
-3258
NM_025867
NM_177834
NM_178098
-5.25
-3.85
-3.83
1058
-7196
1837
NM_009256
NM_010819
NM_175939
NM_025887
NM_153397
-3.48
-3.41
-2.8
-2.73
-2.51
3224
-1683
-1798
-4645
-2776
U40827
NM_172852
-2.17
-1.93
-1774
31587
Downregulated
Mme
Serpinb6c
Serpinb11
Cpa6
4930486L24Rik
Serpinb9
Clec4d
Adam29
Rab5a
Adam32
Abl2
Serpinb13
11
(ovalbumin); member 13
Upregulated
Serpina3k
Proz
Ms4a3
Ms4a6b
Klkb1
Spink3
Fpr2
Ccl12
Angptl3
Arhgap20
Serpini2
Odz3
Ctsg
Htra3
Serpina10
Agtr1a
Agtr2
Lpar4
Iigp1
Ppbp
Ceacam1
Lonrf2
Dpp6
Tfpi2
Tspan12
Plcl2
serine (or cysteine) peptidase inhibitor; clade A;
member 3K
protein Z; vitamin K-dependent plasma glycoprotein
membrane-spanning 4-domains; subfamily A; member
3
membrane-spanning 4-domains; subfamily A; member
6B
kallikrein B; plasma 1
serine peptidase inhibitor; Kazal type 3
formyl peptide receptor 2
chemokine (C-C motif) ligand 12
angiopoietin-like 3
Rho GTPase activating protein 20
serine (or cysteine) peptidase inhibitor; clade I;
member 2
odd Oz/ten-m homolog 3 (Drosophila)
cathepsin G
HtrA serine peptidase 3
serine (or cysteine) peptidase inhibitor; clade A
(alpha-1 antiproteinase; antitrypsin); member 10
angiotensin II receptor; type 1a
angiotensin II receptor; type 2
lysophosphatidic acid receptor 4
interferon inducible GTPase 1
pro-platelet basic protein
carcinoembryonic antigen-related cell adhesion
molecule 1
LON peptidase N-terminal domain and ring finger 2
dipeptidylpeptidase 6
tissue factor pathway inhibitor 2
tetraspanin 12
phospholipase C-like 2
ENSMUST00000043058
AK005011
355.37
233.94
-5407
-3965
NM_133246
33.25
-117
NM_027209
NM_008455
NM_009258
NM_008039
NM_011331
NM_013913
NM_175535
32.11
30.33
27.94
23.71
22.05
16.91
14.24
-7265
-6906
-3939
-3002
-585
-1995
-24498
NM_026460
NM_011857
NM_007800
NM_030127
13.73
13.4
12.96
12.19
45020
-5364
-6902
-117
AK050552
NM_177322
NM_007429
NM_175271
NM_021792
NM_023785
10.86
8.16
7.61
6.77
6.54
6.3
5648
2852
-1158
-3488
-3132
-6427
NM_001039186
AK013739
NM_010075
NM_009364
NM_173007
NM_013880
6.24
5.91
5.68
5.52
5.2
4.32
-4739
-1805
-7106
-1241
-1527
-117
12
Fabp4
Uchl1
Adamts12
Farp2
Adamts5
Tmeff2
Tiam2
Fbxw8
Serpinf1
Capn6
Klk1b11
fatty acid binding protein 4; adipocyte
ubiquitin carboxy-terminal hydrolase L1
a disintegrin-like and metallopeptidase (reprolysin
type) with thrombospondin type 1 motif; 12
FERM; RhoGEF and pleckstrin domain protein 2
a disintegrin-like and metallopeptidase (reprolysin
type) with thrombospondin type 1 motif; 5
(aggrecanase-2)
transmembrane protein with EGF-like/follistatin-like
domains 2
T-cell lymphoma invasion and metastasis 2
F-box and WD-40 domain protein 8
serine (or cysteine) peptidase inhibitor; clade F;
member 1
calpain 6
kallikrein 1-related peptidase b11
NM_024406
NM_011670
4.18
3.96
-5690
28853
NM_175501
NM_145519
3.84
3.19
-189
-2355
NM_011782
3.18
-117
NM_019790
NM_011878
NM_172721
2.98
2.83
2.62
-3773
-282
1874
NM_011340
AK048028
NM_010640
2.48
1.97
1.83
3575
-4212
385
Signalling
Gene symbol
Gene full name
Accession Number
Fold change
ChIP on chip:
distance to TSS
(nearest peak) (bp)
chemokine (C-C motif) ligand 2
relaxin 1
solute carrier family 6 (neurotransmitter transporter);
member 17
thymoma viral proto-oncogene 3
chloride intracellular channel 5
interleukin 22 receptor; alpha 2
interleukin 1 family; member 5 (delta)
olfactory receptor 1226
urotensin 2 receptor
olfactory receptor 691
interferon alpha B
olfactory receptor 1155
NM_011333
NM_011272
-34.39
-10.12
-585
-117
NM_172271
NM_011785
NM_172621
NM_178258
NM_019451
NM_146967
NM_145440
NM_147061
BC116864
NM_146643
-9.85
-8.87
-7.67
-7.66
-7.59
-6.44
-4.96
-4.59
-4.24
-4.2
-6150
-117
-7756
-1645
-28
-2178
-3992
2568
-117
-3545
Downregulated
Ccl2
Rln1
Slc6a17
Akt3
Clic5
Il22ra2
Il1f5
Olfr1226
Uts2r
Olfr691
Ifnab
Olfr1155
13
Olfr1231
Il17re
Nebl
Olfr898
Olfr1351
Olfr380
Olfr291
Olfr1056
Tmc1
Klri2
Olfr183
Tmem35
Olfr905
Igf2bp2
Vamp1
Olfr23
Olfr1209
Olfr1294
Olfr1467
Glra2
Slc26a3
Olfr160
Olfr821
Iqcb1
Klrk1
Nts
Olfr665
Olfr996
Rxfp2
Olfr1133
Olfr554
Olfr348
Olfr689
olfactory receptor 1231
interleukin 17 receptor E
Nebulette
olfactory receptor 898
olfactory receptor 1351
olfactory receptor 380
olfactory receptor 291
olfactory receptor 1056
transmembrane channel-like gene family 1
killer cell lectin-like receptor family I member 2
olfactory receptor 183
transmembrane protein 35
olfactory receptor 905
insulin-like growth factor 2 mRNA binding protein 2
vesicle-associated membrane protein 1
olfactory receptor 23
olfactory receptor 1209
olfactory receptor 1294
olfactory receptor 1467
glycine receptor; alpha 2 subunit
solute carrier family 26; member 3
olfactory receptor 160
olfactory receptor 821
IQ calmodulin-binding motif containing 1
killer cell lectin-like receptor subfamily K; member 1
Neurotensin
olfactory receptor 665
olfactory receptor 996
relaxin/insulin-like family peptide receptor 2
olfactory receptor 1133
olfactory receptor 554
olfactory receptor 348
olfactory receptor 689
NM_146454
NM_145826
AK036214
NM_146871
NM_147040
NM_147025
NM_146415
NM_147018
AF417579
NM_177155
NM_146485
NM_026239
NM_146804
NM_183029
NM_009496
NM_010970
NM_146461
NM_146885
NM_146691
NM_183427
AK035716
NM_030553
NM_146776
NM_177128
AF054819
NM_024435
NM_146814
NM_146437
NM_080468
NM_146351
NM_146325
NM_146944
NM_146750
-3.98
-3.89
-3.86
-3.66
-3.59
-3.55
-3.47
-3.41
-3.34
-3.3
-3.29
-3.24
-3.15
-3.04
-3.02
-2.98
-2.92
-2.9
-2.89
-2.85
-2.82
-2.78
-2.72
-2.67
-2.64
-2.62
-2.55
-2.41
-2.4
-2.28
-2.27
-2.25
-2.25
-5932
346
-6453
-858
-117
-3449
652
-3210
-5474
-2244
-5002
-5664
-7848
114903
-1683
-1367
-3444
-117
-442
-174
-20826
-117
-1656
-117
-6772
1305
513
-117
-4523
255
1380
707
2415
14
Teddm1
Ifna12
Olfr466
Cpne8
Olfr980
Rxfp3
Grem2
Bdnf
Olfr985
Olfr1278
Olfr678
Gpr156
Gngt1
Olfr1388
Olfr488
Olfr99
Pde7a
Olfr552
Slc6a11
Tacr3
Il31
Htr4
Nrg3
Procr
Ptger4
Olfr782
Olfr1234
Olfr1250
Olfr165
Olfr1019
Wnt6
transmembrane epididymal protein 1
interferon alpha 12
olfactory receptor 466
copine VIII
olfactory receptor 980
relaxin family peptide receptor 3
gremlin 2 homolog; cysteine knot superfamily
(Xenopus laevis)
brain derived neurotrophic factor
olfactory receptor 985
olfactory receptor 1278
olfactory receptor 678
G protein-coupled receptor 156
guanine nucleotide binding protein (G protein);
gamma transducing activity polypeptide 1
olfactory receptor 1388
olfactory receptor 488
olfactory receptor 99
phosphodiesterase 7A
olfactory receptor 552
solute carrier family 6 (neurotransmitter transporter;
GABA); member 11
tachykinin receptor 3
interleukin 31
5 hydroxytryptamine (serotonin) receptor 4
neuregulin 3
protein C receptor; endothelial
prostaglandin E receptor 4 (subtype EP4)
olfactory receptor 782
olfactory receptor 1234
olfactory receptor 1250
olfactory receptor 165
olfactory receptor 1019
wingless-related MMTV integration site 6
NM_178244
NM_177361
NM_146819
NM_025815
NM_147106
NM_178717
-2.25
-2.24
-2.23
-2.21
-2.21
-2.2
9185
-117
-1158
-7622
-6840
-1225
NM_011825
NM_007540
NM_146855
NM_146394
NM_146758
NM_153394
-2.19
-2.15
-2.15
-2.14
-2.11
-2.1
-117
-2462
-117
-933
-752
-1353
NM_010314
NM_146467
NM_146732
NM_146515
NM_008802
NM_147102
-2.09
-2.07
-2.07
-2.05
-2.04
-2.03
1642
-2925
-1044
-2698
-547
1380
NM_172890
NM_021382
AK005939
NM_008313
NM_008734
NM_011171
NM_008965
NM_001011797
NM_146973
NM_146965
NM_146466
NM_147015
M89800
-2.02
-1.97
-1.97
-1.96
-1.96
-1.95
-1.94
-1.9
-1.9
-1.87
-1.83
-1.83
-1.78
345
-6389
-117
-2528
-117
-654
-1002
-5514
-1535
-3163
-5065
-3135
-7973
15
Ralgds
Olfr1290
Olfr124
Olfr45
ral guanine nucleotide dissociation stimulator
olfactory receptor 1290
olfactory receptor 124
olfactory receptor 45
NM_009058
NM_146262
NM_147062
NM_146963
-1.78
-1.75
-1.75
-1.74
-117
-117
150531
-1784
secretogranin III
leukocyte cell-derived chemotaxin 2
calbindin 1
klotho beta
synaptotagmin I
chloride channel calcium activated 6
Myostatin
chromogranin B
annexin A10
cyclic AMP-regulated phosphoprotein; 21
follistatin-like 5
platelet-derived growth factor; D polypeptide
G-protein coupled receptor 65
protein tyrosine phosphatase; receptor type; R
synaptosomal-associated protein 25
potassium intermediate/small conductance calciumactivated channel; subfamily N; member 2
solute carrier family 5 (sodium/glucose cotransporter);
member 11
tetratricopeptide repeat domain 30A1
potassium inwardly-rectifying channel; subfamily J;
member 10
discs; large homolog 2 (Drosophila)
solute carrier family 12; member 1
ELKS/RAB6-interacting/CAST family member 2
RAB9B; member RAS oncogene family
Eph receptor A3
secretogranin II
NM_009130
NM_010702
NM_009788
NM_031180
NM_009306
NM_207208
NM_010834
NM_007694
NM_011922
AK041940
NM_178673
NM_027924
NM_008152
NM_011217
M22012
64.14
52.07
49.71
47.62
46.55
42.65
33.29
28.32
26.24
24.72
24.36
22.42
21.07
21.01
19.9
-117
-2845
-2534
352
2130
69627
2524
986
2131
-7854
-1426
1582
-117
-3750
849
NM_080465
17.85
-3491
NM_146198
NM_030188
17.62
15.94
-3280
-7468
NM_001039484
NM_011807
U61381
NM_177814
NM_176971
NM_010140
NM_009129
15.63
15.53
15.43
15.3
13.86
10.77
10.52
-4625
-117
-2139
-821
-2431
-3123
23937
Upregulated
Scg3
Lect2
Calb1
Klb
Syt1
Clca6
Mstn
Chgb
Anxa10
Arpp21
Fstl5
Pdgfd
Gpr65
Ptprr
Snap25
Kcnn2
Slc5a11
Ttc30a1
Kcnj10
Dlg2
Slc12a1
Erc2
Rab9b
Epha3
Scg2
16
Rgs8
Pclo
Gabrb1
Acvr1c
Treml4
Gpr85
Gbp6
Ppp1r1c
P2ry13
Ghrl
Gpr88
Csmd3
Calcr
Elmo1
Rassf6
Rttn
Sema3d
C1qtnf9
Olfr744
Ins2
Csf3r
Camk2b
Opn5
Avpr1a
Khdrbs2
Epha5
Scn3b
Ihh
Npsr1
regulator of G-protein signalling 8
piccolo (presynaptic cytomatrix protein)
gamma-aminobutyric acid (GABA) A receptor; subunit
beta 1
activin A receptor; type IC
triggering receptor expressed on myeloid cells-like 4
G protein-coupled receptor 85
guanylate binding protein 6
protein phosphatase 1; regulatory (inhibitor) subunit
1C
purinergic receptor P2Y; G-protein coupled 13
Ghrelin
G-protein coupled receptor 88
CUB and Sushi multiple domains 3
calcitonin receptor
engulfment and cell motility 1; ced-12 homolog (C.
elegans)
Ras association (RalGDS/AF-6) domain family member 6
Rotatin
sema domain; immunoglobulin domain (Ig); short basic
domain; secreted; (semaphorin) 3D
C1q and tumor necrosis factor related protein 9
olfactory receptor 744
insulin II
colony stimulating factor 3 receptor (granulocyte)
calcium/calmodulin-dependent protein kinase II; beta
opsin 5
arginine vasopressin receptor 1A
KH domain containing; RNA binding; signal
transduction associated 2
Eph receptor A5
sodium channel; voltage-gated; type III; beta
Indian hedgehog
neuropeptide S receptor 1
NM_026380
NM_001110796
10.29
10.04
-1700
-4260
NM_008069
NM_001033369
NM_172623
NM_145066
NM_145545
10.03
9.7
9.41
9.11
9.04
2971
-2341
2551
-1904
-4883
AK051449
NM_028808
NM_021488
NM_022427
NM_001081391
NM_007588
8.82
8.19
7.99
6.75
6.71
6.61
-3460
-1371
-1904
-2466
-117
-7077
NM_080288
NM_028478
NM_175542
6.34
6.26
5.61
-5298
-2461
-3014
NM_028882
NM_183175
NM_001011738
NM_008387
NM_007782
NM_007595
NM_181753
NM_016847
5.49
5.47
5.37
5.31
5.12
5.03
4.97
4.92
96378
-117
-4251
3053
1031
-6752
3937
-1129
NM_133235
NM_007937
NM_153522
NM_010544
NM_175678
4.81
4.78
4.74
4.53
4.34
-743
-3281
71212
-2379
-4153
17
Rgs7bp
Gabrg2
4632428N05Rik
Adora3
Gpr37
Gabra2
Mrgprb2
Prkg1
Gabrg1
Slc6a20a
Il1f6
Ifi47
Prkcq
Olfr128
Hhip
Arhgap24
Sh2d1b1
Grm3
Syp
Adcy2
Syt4
Synpr
Gpr135
Ms4a6c
Dact1
Slitrk1
Olfr1134
Ifi205
Taar9
regulator of G-protein signalling 7 binding protein
gamma-aminobutyric acid (GABA) A receptor; subunit
gamma 2
RIKEN cDNA 4632428N05 gene
adenosine A3 receptor
G protein-coupled receptor 37
gamma-aminobutyric acid (GABA) A receptor; subunit
alpha 2
MAS-related GPR; member B2
protein kinase; cGMP-dependent; type I
gamma-aminobutyric acid (GABA) A receptor; subunit
gamma 1
solute carrier family 6 (neurotransmitter transporter);
member 20A
interleukin 1 family; member 6
interferon gamma inducible protein 47
protein kinase C; theta
olfactory receptor 128
Hedgehog-interacting protein
Rho GTPase activating protein 24
SH2 domain protein 1B1
glutamate receptor; metabotropic 3
Synaptophysin
adenylate cyclase 2
synaptotagmin IV
Synaptoporin
G protein-coupled receptor 135
membrane-spanning 4-domains; subfamily A; member
6C
dapper homolog 1; antagonist of beta-catenin
(xenopus)
SLIT and NTRK-like family; member 1
olfactory receptor 1134
interferon activated gene 205
trace amine-associated receptor 9
NM_029879
4.25
1093
NM_008073
NM_028732
AK013534
ENSMUST00000054867
4.21
3.95
3.9
3.87
-7904
-4008
-117
-8171
NM_008066
NM_175531
NM_011160
3.84
3.78
3.63
-117
-21570
-117
NM_010252
3.58
-117
AK080979
NM_019450
NM_008330
NM_008859
NM_206816
NM_020259
NM_146161
NM_012009
NM_181850
NM_009305
NM_153534
NM_009308
NM_028052
NM_181752
3.57
3.54
3.52
3.51
3.4
3.28
3.27
3.08
3.05
3.01
2.96
2.82
2.81
2.8
-117
-1604
-690
-7749
-4320
-492
4505
-1687
-4427
4323
-117
-117
2200
-6001
NM_028595
2.8
-38
AK077691
NM_199065
NM_147030
AK036386
NM_001010831
2.79
2.77
2.75
2.7
2.65
-1923
-4597
255
-117
-7491
18
Tmem100
Rgs17
A630033H20Rik
Gbp2
Olfr1352
Chrd
Cabp2
Olfr1123
Rims1
Olfr1245
Olfr508
Umodl1
Olfr390
Sln
Slco1a6
Ranbp17
Olfr609
Plscr1
Olfr1255
Bpil3
Cd209e
Tmtc4
Olfr541
Gpr34
Ccl11
Olfr642
Olfr895
Sytl4
Olfr295
transmembrane protein 100
regulator of G-protein signalling 17
RIKEN cDNA A630033H20 gene
guanylate binding protein 2
olfactory receptor 1352
Chordin
calcium binding protein 2
olfactory receptor 1123
regulating synaptic membrane exocytosis 1
olfactory receptor 1245
olfactory receptor 508
uromodulin-like 1
olfactory receptor 390
Sarcolipin
solute carrier organic anion transporter family;
member 1a6
RAN binding protein 17
olfactory receptor 609
phospholipid scramblase 1
olfactory receptor 1255
bactericidal/permeability-increasing protein-like 3
CD209e antigen
transmembrane and tetratricopeptide repeat
containing 4
olfactory receptor 541
G protein-coupled receptor 34
chemokine (C-C motif) ligand 11
olfactory receptor 642
olfactory receptor 895
synaptotagmin-like 4
olfactory receptor 295
NM_026433
NM_019958
NM_175442
NM_010260
NM_147071
NM_009893
NM_013878
NM_146350
NM_001012625
NM_146788
NM_146773
NM_177465
NM_146347
AK009809
2.65
2.58
2.56
2.51
2.45
2.4
2.38
2.38
2.32
2.3
2.27
2.22
2.21
2.13
-1153
-117
1730
-117
-2732
-117
-6860
-3405
-1594
-670
770
-3890
10333
2626
NM_023718
NM_023146
NM_147082
NM_011636
NM_146977
NM_199303
NM_130905
2.12
2.11
2.1
2.07
2.05
2.04
1.87
1613
-2599
-4400
-3767
-2462
-654
6578
NM_028651
NM_146962
NM_011823
NM_011330
NM_146329
NM_146875
NM_013757
NM_146851
1.86
1.82
1.81
1.8
1.78
1.77
1.76
1.7
637
-6312
-3833
-585
-475
-117
-775
-4470
Transcription
Gene symbol
Gene full name
Accession Number
Fold change
ChIP on chip: distance to
TSS (nearest peak) (bp)
19
TSS (nearest peak) (bp)
Downregulated
Fos
Egr2
Rfx3
Fgf1
Zfp330
Neurod4
Erf
Zfp677
Prdm5
FBJ osteosarcoma oncogene
early growth response 2
regulatory factor X; 3 (influences HLA class II expression)
fibroblast growth factor 1
zinc finger protein 330
neurogenic differentiation 4
Ets2 repressor factor
zinc finger protein 677
PR domain containing 5
NM_010234
NM_010118
NM_011265
NM_010197
NM_145600
NM_007501
NM_010155
NM_172486
NM_027547
-12.63
-6.09
-5.03
-4.01
-2.44
-2.07
-2
-1.99
-1.77
195
-117
-3978
-117
-734
-798
-4499
-3158
-4447
doublesex and mab-3 related transcription factor 2
LIM homeobox protein 8
transcription factor EC
leucine zipper protein 2
neurogenic differentiation 6
LIM homeobox protein 6
SRY-box containing gene 13
mastermind like 2 (Drosophila)
growth factor independent 1B
lin-28 homolog B (C. elegans)
limb expression 1 homolog (chicken)
F-box protein 40
LIM and calponin homology domains 1
myogenic factor 6
peroxisome proliferator activated receptor gamma
runt-related transcription factor 1; translocated to; 1
(cyclin D-related)
zinc finger protein 161
myocyte enhancer factor 2C
zinc finger protein 58
NM_145831
NM_010713
NM_031198
NM_178705
NM_009717
AJ000337
NM_011439
XM_001481278
NM_008114
AK044904
NM_025681
AK036684
NM_001001980
NM_008657
NM_011146
36
15.57
14.78
14.72
13.25
9.04
8.52
8.06
7.6
7.14
7.01
4.52
4.09
3.96
3.9
-117
-2399
-3855
-7916
-117
-4545
-6538
-742
-7306
-117
-117
-353
-2494
-12192
-117
NM_009822
NM_009547
NM_025282
M28513
3.53
3.51
3.1
3.09
4639
-8565
-80
-6801
Upregulated
Dmrt2
Lhx8
Tcfec
Luzp2
Neurod6
Lhx6
Sox13
Maml2
Gfi1b
Lin28b
Lix1
Fbxo40
Limch1
Myf6
Pparg
Runx1t1
Zfp161
Mef2c
Zfp58
20
Zfp595
Meox2
Mkx
Tox
Robo1
Zfp275
Ctbp1
Msc
Bsx
zinc finger protein 595
mesenchyme homeobox 2
mohawk homeobox
thymocyte selection-associated high mobility group box
roundabout homolog 1 (Drosophila)
zinc finger protein 275
C-terminal binding protein 1
Musculin
brain specific homeobox
NM_177622
NM_008584
NM_177595
NM_145711
NM_019413
NM_031494
NM_013502
NM_010827
NM_178245
2.94
2.82
2.72
2.55
2.33
2.18
1.93
1.84
1.84
2843
-1279
-3826
194
-5178
-4218
-117
-7889
71212
Unannotated
Gene symbol
Gene full name
Accession Number
Fold change
ChIP on chip: distance
to TSS (nearest peak)
(bp)
RIKEN cDNA 4930555F03 gene
coiled-coil domain containing 14
RIKEN cDNA 1700049L16 gene
ribosomal protein S23
GRAM domain containing 3
RIKEN cDNA E030010A14 gene
tetratricopeptide repeat domain 14
cDNA sequence BC030307
M-phase phosphoprotein 10 (U3 small nucleolar
ribonucleoprotein)
RIKEN cDNA 2310008H04 gene
RIKEN cDNA 2810403A07 gene
Hspb associated protein 1
headcase homolog (Drosophila)
RIKEN cDNA 4930578N16 gene
predicted gene 94
RIKEN cDNA 1700023F06 gene
RIKEN cDNA D630037F22 gene
coiled-coil domain containing 52
AK042788
AK090294
AV045951
NM_024175
NM_026240
NM_183160
NM_025978
NM_001003939
-25.56
-8.55
-5.64
-4.29
-4.24
-4.02
-3.08
-2.96
-6871
-379
3703
-499
992
-15773
-6263
-906
NM_026483
NM_146068
NM_028814
NM_175111
BC094026
NM_001077684
NM_001033280
BC100507
NM_001033385
NM_144550
-2.92
-2.54
-2.36
-2.21
-2.1
-2.09
-2.01
-1.93
-1.91
-1.83
-4227
-6490
1188
-1516
-1900
-1201
20759
-5045
1857
1333
Downregulated
4930555F03Rik
Ccdc14
1700049L16Rik
Rps23
Gramd3
E030010A14Rik
Ttc14
BC030307
Mphosph10
2310008H04Rik
2810403A07Rik
Hspbap1
Heca
4930578N16Rik
Gm94
1700023F06Rik
D630037F22Rik
Ccdc52
21
Ldoc1
4921530L21Rik
2810007J24Rik
leucine zipper; down-regulated in cancer 1
RIKEN cDNA 4921530L21 gene
RIKEN cDNA 2810007J24 gene
NM_001018087
NM_025733
NM_175250
-1.78
-1.78
-1.7
-3120
-117
-4822
ribonuclease; RNase A family; 1 (pancreatic)
RUN and FYVE domain containing 3
submandibular gland protein C
RIKEN cDNA 1700019D03 gene
discs; large (Drosophila) homolog-associated protein 3
RIKEN cDNA E030002O03 gene
recombination activating gene 1
expressed sequence AW551984
seminal vesicle antigen-like 1
expressed sequence AI747448
sex comb on midleg-like 2 (Drosophila)
RIKEN cDNA D930028M14 gene
RIKEN cDNA 4933403F05 gene
membrane-spanning 4-domains; subfamily A; member 7
RIKEN cDNA 6720456H20 gene
paternally expressed 12
RIKEN cDNA 1600014C10 gene
RIKEN cDNA A730017C20 gene
tetratricopeptide repeat domain 30B
copine IV
RIKEN cDNA 1700012B09 gene
testis specific gene A14
sterile alpha motif domain containing 9-like
sine oculis-binding protein homolog (Drosophila)
nucleoporin 205
RIKEN cDNA 5830405N20 gene
nei like 3 (E. coli)
tetratricopeptide repeat domain 29
NM_011271
NM_027530
NM_198927
NM_144953
NM_198618
NM_172905
NM_009019
NM_178737
NM_027832
NM_001033199
NM_133194
AK142847
NM_153794
NM_001025610
NM_172600
NM_013788
NM_028166
NM_173759
NM_028235
NM_028719
NM_029306
NM_031998
XM_620286
NM_175407
AK014419
NM_183264
AK031027
NM_183096
65.26
38.13
34.96
34.11
33.21
20.07
19.16
13.01
13
12.19
10.86
10.18
10.07
9.29
8.49
8.33
8.29
7.98
7.4
6.91
6.73
6.61
5.87
5.48
5.15
5.15
4.89
4.65
-3253
-4057
-189
-1279
-3964
-4547
511
-5923
-2934
50495
-900
-3773
-1696
-117
-5982
5635
822
1704
-1201
-4353
-5715
-4625
3658
-117
-7802
-1656
-1863
-7818
Upregulated
Rnase1
Rufy3
Smgc
1700019D03Rik
Dlgap3
E030002O03Rik
Rag1
AW551984
Sval1
AI747448
Scml2
D930028M14Rik
4933403F05Rik
Ms4a7
6720456H20Rik
Peg12
1600014C10Rik
A730017C20Rik
Ttc30b
Cpne4
1700012B09Rik
Tsga14
Samd9l
Sobp
Nup205
5830405N20Rik
Neil3
Ttc29
22
2410066E13Rik
1810009J06Rik
1110006G14Rik
C530028O21Rik
6330403K07Rik
3110047P20Rik
Ttc12
Nap1l5
2810032G03Rik
Iqsec3
1700086L19Rik
Popdc3
1700012B07Rik
1700054O13Rik
Mrps11
0610040J01Rik
Casd1
4933428M09Rik
Nap1l3
3110070M22Rik
Tsen2
Tdrd7
RIKEN cDNA 2410066E13 gene
RIKEN cDNA 1810009J06 gene
RIKEN cDNA 1110006G14 gene
RIKEN cDNA C530028O21 gene
RIKEN cDNA 6330403K07 gene
RIKEN cDNA 3110047P20 gene
tetratricopeptide repeat domain 12
nucleosome assembly protein 1-like 5
RIKEN cDNA 2810032G03 gene
IQ motif and Sec7 domain 3
RIKEN cDNA 1700086L19 gene
popeye domain containing 3
RIKEN cDNA 1700012B07 gene
RIKEN cDNA 1700054O13 gene
mitochondrial ribosomal protein S11
RIKEN cDNA 0610040J01 gene
CAS1 domain containing 1
RIKEN cDNA 4933428M09 gene
nucleosome assembly protein 1-like 3
RIKEN cDNA 3110070M22 gene
tRNA splicing endonuclease 2 homolog (S. cerevisiae)
tudor domain containing 7
BC042507
NM_023707
XM_001478810
NM_175696
NM_134022
XM_132047
NM_172770
NM_021432
AK029678
NM_001033354
XM_358420
NM_024286
AK132924
NM_026096
NM_026498
NM_029554
NM_145398
AK016974
NM_138742
AK014250
AK044190
NM_146142
4.23
4.02
3.82
3.78
3.54
3.5
3.5
3.34
3.03
2.94
2.92
2.76
2.72
2.67
2.35
2.28
2.24
2.01
1.87
1.85
1.73
1.72
126
-117
-1303
-1683
-1532
-3271
-117
-6271
-5282
-3577
-779
-4314
2957
-117
-6292
-3271
-3371
-1782
1636
3039
443
-117
Hair follicle stem cells-associated genes
Gene symbol
Gene full name
Accession Number
Fold change
ChIP on chip: distance to
TSS (nearest peak) (bp)
CD34 antigen
Transcription factor 7-like 2
SRY-box containing gene 9
NM_133654
NM_009333
NM_011448
-9.94
-5.16
-4.44
-117
-3370
-1927
leucine rich repeat containing G protein coupled receptor
5
S100 calcium binding protein A9 (calgranulin B)
NM_010195
NM_009114
9.62
3.25
-2123
-5897
Downregulated
Cd34
Tcf7l2 (Tcf4)
Sox9
Upregulated
Lgr5
S100a9