Articles in PresS. Am J Physiol Lung Cell Mol Physiol (December 18, 2015). doi:10.1152/ajplung.00398.2015 1 Re-submitted to the AJP Lung call for papers on ‘sex differences in the respiratory system’ 2 on: 11 December 2015 (MS#: L-00398-2015) 3 4 5 6 Estrogenic compounds reduce influenza A virus replication in primary human nasal 7 epithelial cells derived from female, but not male, donors 8 Jackye Peretz1, Andrew Pekosz1, 2, Andrew P. Lane4, and Sabra L. Klein1, 3 9 10 11 12 13 14 15 16 1 W. Harry Feinstone Department of Molecular Microbiology and Immunology, 2Department of Environmental Health Sciences, and 3Department of Biochemistry and Molecular Biology, The Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland 21205, 4 Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287 17 18 Running Head: estrogenic signaling and influenza 19 20 Keywords: antiviral defenses, estradiol, respiratory disease, SERMs, zinc finger proteins 21 22 Corresponding author: 23 Sabra L. Klein 24 25 26 Email: [email protected] Phone: (410) 955-8898 Fax: (410) 955-0105 Copyright © 2015 by the American Physiological Society. Peretz et al. 2 27 Abstract 28 Influenza causes an acute infection characterized by virus replication in respiratory epithelial 29 cells. The severity of influenza and other respiratory diseases changes over the life course and 30 during pregnancy in women, suggesting that sex steroid hormones, such as estrogens, may be 31 involved. Using primary, differentiated human nasal epithelial cell (hNEC) cultures from adult 32 male and female donors, we exposed cultures to the endogenous 17β-estradiol (E2) or select 33 estrogen receptor modulators (SERMs), then infected cultures with a seasonal influenza A virus 34 (IAV) to determine whether estrogenic signaling could affect the outcome of IAV infection and 35 whether these effects where sex-dependent. Estradiol, raloxifene, and bisphenol A decreased 36 IAV titers in hNECs from female, but not male, donors. The estrogenic decrease in viral titer was 37 dependent on the genomic estrogen receptor- 2 (ESR2) as neither genomic ESR1 nor non- 38 genomic GPR30 were expressed in hNEC cultures and addition of the genomic ER antagonist 39 ICI 182,780 reversed the antiviral effects of E2. Treatment of hNECs with E2 had no effect on 40 interferon or chemokine secretion, but significantly downregulated cell metabolic processes, 41 including genes that encode for zinc finger proteins, many of which contain estrogen response 42 elements in their promoters. These data provide novel insights into the cellular and molecular 43 mechanisms of how natural and synthetic estrogens impact IAV infection in respiratory epithelial 44 cells derived from humans. Peretz et al. 45 3 Introduction 46 Biological differences exist between males and females, yet these differences are 47 often overlooked in experimental studies in immunology and infectious diseases (2). The 48 recent policy announcement by the National Institutes of Health (NIH) that applicants 49 consider balancing the sexes in preclinical, cell culture and animal studies speaks to the 50 importance of sex as a biological variable that can help predict the outcome of diseases (4, 51 19). Clinical observations reveal that respiratory diseases, such as asthma, chronic 52 obstructive pulmonary disorder, and influenza are often more severe in women than men, 53 being highly dependent on both age and hormonal status (3, 18). Influenza, in particular, is a 54 major recurring cause of morbidity and mortality worldwide, affecting 10% of the population 55 annually through epidemics, pandemics, and seasonal outbreaks. When age and sex are 56 included in analyses of influenza pathogenesis, young adult women experience more severe 57 outcomes compared to age-matched men (42). Young adult women were reportedly 2-6 58 times more likely to die from H5N1 or H7N9 avian influenza infection and during the initial 59 wave of the 2009 H1N1 influenza pandemic (14, 51, 64). Influenza is considered an immune- 60 mediated disease, in which the disease severity is largely determined by the strength of the 61 host inflammatory response to infection (56). Murine models have been instrumental in 62 characterizing sex differences in the outcome of influenza A virus (IAV) infection (26, 46, 47). 63 These studies collectively illustrate that young adult female mice suffer a worse outcome 64 from infection with IAV than their male counterparts. Sex differences in the outcome of IAV in 65 mice are not caused by differences in virus replication in the lower respiratory tract (i.e., 66 lungs), but rather are associated with an exacerbated proinflammatory cytokine and 67 chemokine response in the lungs (26, 47). Regulating the balance between immune 68 responses causing protection or pathology is integral for repair of pulmonary tissue and 69 recovery from infection. Peretz et al. 4 70 Murine models further reveal that sex differences in the outcome of respiratory 71 diseases, including IAV, are mitigated in the absence of sex steroid hormones (46, 47), 72 suggesting that the hormonal milieu plays a fundamental role in determining sex-specific 73 differences in the outcome of infection. Endogenous sex steroid hormones, such as 17β- 74 estradiol (E2), are immunomodulatory and regulate cellular immune responses to infection 75 (54, 63). In mouse models of asthma, allergy, and IAV, females suffer a worse outcome from 76 pulmonary diseases compared to males (30, 47). Among female rodents, endogenous 77 changes in circulating E2 concentrations alter lung function and exogenous E2 treatment 78 reduces pulmonary inflammation and disease symptoms (22, 30, 45, 65). Continuous E2 79 exposure, but not cyclical or ablated E2, in adult female mice prolongs survival following IAV 80 infection (47). In women, sustained concentrations of E2 are associated with improved 81 outcome of respiratory diseases, such as asthma. For example, administration of oral 82 contraceptives containing E2 reduces allergic inflammation in the respiratory tract and 83 asthma exacerbations associated with premenstrual asthma (22, 59). 84 Estrogens, primarily E2, regulate cellular function in diverse cell types, via binding to 85 intracellular, genomic estrogen receptors (ERs), such ERα (ESR1) and ERβ (ESR2), or to 86 membrane-associated, non-genomic ERs, such as the G protein-coupled estrogen receptor 87 (GPER). These receptors are cell type-specific and can activate gene expression directly by 88 serving as ligand-dependent transcriptional factors (ESR1 and ESR2) or indirectly by altering 89 signaling pathways, including ERK/MAPK, NF-κB, and STAT activity (10, 54). Both immune 90 cells and non-immune cells (e.g., respiratory epithelial cells), have intracellular ERs that 91 regulate cellular functions, including inflammatory responses (10). Targeting ER activity might 92 be therapeutic for diseases that are caused by excessive inflammation and that 93 disproportionately affect females. Selective estrogen receptor modulators (SERMs) bind to ERs 94 to cause conformational changes that alter engagement with coactivator and corepressor Peretz et al. 5 95 proteins to initiate either induction or suppression of target gene transcription (21, 38). A recent 96 screen revealed antiviral properties of two SERMs against Ebola virus infection: clomiphene, 97 which is used to treat infertility, and raloxifene, approved for treatment of osteoporosis and to 98 decrease the risk of breast cancer in postmenopausal women (17). Environmental estrogens, 99 including xenoestrogens, such as bisphenol A (BPA), also can interact with ERs to alter 100 transcriptional activity (57), but the effects on cellular responses to viruses have not been 101 evaluated. In this study, we used primary differentiated human nasal epithelial cell (hNEC) 102 cultures isolated from healthy tissue of male and female donors (8, 20, 44) to study the 103 effects of estrogenic compounds on the human cellular response to IAV infection. Nasal 104 epithelial cells are the primary cell type infected with IAV and these cultures allowed us to 105 investigate IAV infection and pathogenesis based on the sex and hormonal milieu of the donor 106 cultures. 107 108 Materials and Methods 109 MDCK cells 110 Madin-Darby canine kidney (MDCK) cells were propagated in Dulbecco's modified Eagle's low- 111 phenol, high glucose medium (DMEM; Invitrogen) containing 10% fetal bovine serum (FBS; Life 112 Technologies), 100 U/ml penicillin (Life Technologies), 100 μg/ml streptomycin (Life 113 Technologies), and 2mM L-Glutamine (Life Technologies). The cells were maintained at 37oC in 114 a humidified environment with 5% CO2. 115 116 Virus 117 The recombinant influenza A/Udorn/307/72 H3N2 virus (IAV) used in this study was described 118 previously (41). The hemagglutinin (HA) protein contains amino acid changes (L226Q/S228G in 119 the H3 numbering system) that allows for preferential binding to α2,3-linked sialic acid. Viral 120 working stocks of were generated by infecting MDCK cells at a multiplicity of infection (MOI) of Peretz et al. 6 121 approximately 0.01 infectious units per cell in low-phenol, high glucose DMEM containing 0.25% 122 bovine serum albumin (BSA; Life Technologies), acetylated trypsin from bovine pancreas 123 (5μg/mL; N-acetyl trypsin; Sigma), 100 U/ml penicillin, 100 μg/ml streptomycin, 6mM L- 124 Glutamine, and 1mM Sodium Pyruvate (Life Technologies), which we refer to as infection 125 media. The infected cells were incubated at 37°C for 72 hours, infected cell supernatant was 126 harvested, clarified by centrifugation, aliquoted, and stored at -80oC. Infectious virus titers were 127 determined by 50% tissue culture infectious dose (TCID50) as described previously (33). 128 129 Chemicals 130 Stock solutions of 17β-estradiol (E2; 1mM; Sigma) were made in ethanol, while raloxifene 131 (100mM; Sigma), ospemifene (100mM; Sigma), clomiphene citrate (100mM; Sigma), ICI 132 182,780 (ICI; 2mM; Tocris-Cookson), and bisphenol A (BPA; 44mM; Sigma; provided by Dr. 133 Jodi A. Flaws, University of Illinois at Urbana-Champaign) were made in dimethyl sulfoxide 134 (DMSO; Sigma). All stock solutions were stored at -20oC. 135 136 Human nasal epithelial cell (hNEC) cultures 137 Primary human nasal epithelial cells were collected from non-diseased nasal mucosa of patients 138 undergoing 139 dacryocystorhinostomy, approach to anterior skull base pathology, or removal of benign nasal 140 masses. The cells were collected from male (n = 10) and female (n = 42) donors (age range 18- 141 45). The research protocol was approved through the Johns Hopkins Institutional Review Board, 142 and all subjects gave signed informed consent. The cells were differentiated at an air-liquid 143 interface (ALI) in 24-well Falcon filter inserts (0.4-μM pore; 0.33cm2; Becton Dickinson) coated 144 with human type IV placental collagen (Sigma-Aldrich) as described previously (8, 20, 44). endoscopic sinonasal 145 146 Infection and treatment of hNEC cultures surgery for non-sinusitis indications, including Peretz et al. 7 147 Prior to infection, the apical surface of hNEC cultures was washed with Dulbecco's PBS with 148 calcium and magnesium (DPBS; Life Technologies). The cultures were infected via the apical 149 chamber with a MOI of 0.1 TCID50/cell or mock infected at 32°C in 200 μl of infection media. 150 After 2 hours, the inoculums were aspirated, the apical surfaces washed twice with DPBS, and 151 cells were incubated at 32°C. At the indicated hours post infection (hpi), 200 μl of infection 152 media was added to the apical surface, incubated at 32°C for five minutes, and then collected. 153 All samples were stored at -80°C. At the indicated times pre- or post-infection, the basolateral 154 media was replaced by media containing doses of vehicle control (EtOH or DMSO as 155 appropriate), E2 (0.1, 1.0, or 10nM), BPA (44 μM), raloxifene (50 μM), ospemifene (50 μM), 156 clomiphene citrate (50 μM), or ICI (100nM). Basolateral media was collected and replaced with 157 media containing fresh vehicle or compound at 48 and 96 hpi. 158 159 Tissue Culture Infectious Dose (TCID50) assay 160 MDCK cells were plated in a 96-well plate and cultured for 72 hours in growth DMEM until 90- 161 100% confluent. The cells were washed twice with DPBS, then covered with 180μl of infection 162 media. Serial dilutions (10-1 to 10-8) of hNEC apical samples at each time-point were made in 163 separate, 96-well plates by adding 20μl of each apical sample to 180μl of infection DMEM, then 164 serially diluted 10 fold. Twenty microliters of each dilution were then added to the MDCK plates 165 in replicates of six, resulting in final dilutions of each sample ranging from 10-2 to 10-9. The 166 infection proceeded for 7 days at 32°C, and then the cells were fixed with 4% formaldehyde and 167 stained with napthol blue-black solution. The cytopathic effect was scored visually and the Reed 168 and Muench calculation was used to determine the titer of infectious virus at each time-point. 169 170 Multiplex Chemokine Assay Analysis Peretz et al. 8 171 The Meso Scale Discovery (MSD) multiplex assay system was used to measure chemokines 172 collected from apical samples of hNECs after infection. In each well, the Chemokine Panel 1 kit 173 quantitatively determined the concentration of eight C-C ligand motif (CCL2, CCL3, CCL4, 174 CCL11, CCL13, CCL17, CCL22, CCL26) and two C-X-C ligand motif (CXCL8, CXCL10) 175 chemokines, according to the manufacturer’s protocol. All samples were run in duplicate. MSD 176 plates were read on the MSD SECTOR Imager 2400 at the Becton Dickinson Core Facility at 177 the Johns Hopkins Bloomberg School of Public Health and analyzed on the accompanying 178 software (MSD Discovery Workbench version 4). 179 180 Enzyme-linked Immunosorbent Assay (ELISA) 181 The PBL Assay Science DIY Human IFN Lambda 1/2/3 (IL-29/28A/28B) ELISA was used to 182 measure levels of interferon lambda (IFNλ) collected from apical samples of hNECs after 183 infection. All samples were run in duplicate and read on the FilterMax F3 Multi-Mode Microplate 184 Reader (Molecular Devices). The data were analyzed with the accompanying software (SoftMax 185 Pro Data Acquisition and Analysis Software). 186 187 Real-time RT-PCR 188 At the indicated times post infection, hNEC cultures were treated with TRIzol Reagent (Life 189 Technologies) and total RNA was extracted using the PureLink™ RNA Mini Kit (Ambion by Life 190 Technologies) according to the manufacturer’s protocol. Reverse transcriptase generation of 191 complementary DNA (cDNA) was performed with 0.5μg of total RNA, primed with a blend of 192 random hexamer and oligo (dT)s against the RNA library, using an iScript RT Kit (Bio-Rad 193 Laboratories, Inc.). Real-time PCR (qPCR) using Ssofast qPCR Supermix™ with EvaGreen 194 (Bio-Rad) was conducted using the StepOnePlus™ Real-Time PCR System (Life Technologies) 195 and accompanying software (StepOne™ Software) according to the manufacturer’s instructions. 196 A dilution curve was generated from a compilation of the samples and qPCR analysis was Peretz et al. 9 197 performed using forward and reverse primers for estrogen receptor alpha (ESR1), estrogen 198 receptor beta (ESR2), G-protein-coupled estrogen receptor 1 (GPER), and the zinc finger 199 protein genes ZNF91, ZMYM6, and ZFAND4. 200 followed by 94oC for 10s, annealing at 60oC for 10s, and extension at 72oC for 10s, for 40 201 cycles, followed by a final extension at 72oC for 10min. A melting curve was generated at 55- 202 90oC to monitor the generation of a single product. 18s RNA (RNA18S) was used as a 203 reference gene for each sample. Final values of relative gene expression were calculated and 204 expressed as the ratio normalized to RNA18S. All analyses were performed in duplicate or 205 triplicate. An initial incubation of 95oC for 10min was 206 207 Western Blot Analysis 208 At the indicated times post infection, cells were lysed with 1% sodium dodecyl sulfate (SDS; 209 Fisher Scientific) in PBS and total protein was measured using the Pierce™ BCA Protein Assay 210 Kit (Life Technologies) according to the manufacturer’s instructions. BSA dilutions (Pierce™ 211 BCA Protein Assay Kit) were used as the standards. For western blot analysis, 7-30μg of total 212 protein from each sample was separated on 4-15% Mini-PROTEAN® TGX™ Precast Gels (Bio- 213 Rad) and transferred to a polyvinylidene fluoride Immunobilon-FL membrane (PVDF; Millipore). 214 The membranes were blocked with PBS containing 5% dry milk powder and 0.05% Tween-20 215 (Sigma). Wash buffer contained PBS with 0.05% Tween-20. Membranes were blocked for 30 216 minutes at room temperature (RT), incubated for 1.5 hours at RT with primary antibody, washed 217 three times each for 5 minutes, incubated for 1 hour at RT with secondary antibody, and then 218 washed three times each for 5 minutes. Primary and secondary antibodies were diluted in 219 blocking buffer. The primary antibodies used were mouse anti-βactin (AC-15 MAb; 1:5000 220 dilution; Abcam-ab6276), rabbit anti-ESR2 (PAb; 1:100 dilution; Thermo- PA1-310B), and rabbit 221 anti-ESR1 (1:500 dilution; Genetex-GTX62423). The Alexa Fluor 647-conjugated secondary 222 antibodies used were a goat anti-mouse immunoglobulin G (IgG) and a donkey anti-rabbit IgG Peretz et al. 10 223 (both at a 1:1000 dilution; Invitrogen). For visualization, membranes were imaged using a 224 FluorChemQ phosphorimager (ProteinSimple) and signal intensities quantified by Image J 225 analyses (NIH). 226 227 Identification of Putative Estrogen Response Elements (EREs) 228 The Dragon ERE Finder version 3.0 (http:// http://datam.i2r.a-star.edu.sg/ereV3/) was used to 229 identify putative EREs in the promoters of select innate immune factor genes (1). The NCBI 230 BLAST program was used search for the annotated start sites of genes of interest against 231 ~11,000 human promoters. These sequences were then used to pinpoint the location of the 232 putative ERE pattern by expanding them to cover an extended region of [-5000, +3000] relative 233 to genes of interest start site. We used the recommended search sensitivity of 83%. 234 235 Microarray Analysis 236 Trizol reagent and the PureLink RNA Mini kit (Ambion/Life Technologies) were used for 237 extraction and purification of RNA. Cells were processed according to the manufacturer’s 238 protocol. Following elution of purified RNA from the PureLink columns with Nuclease-free water, 239 quantitation was performed using a NanoDrop spectrophotometer and quality assessment 240 determined by RNA Nano LabChip analysis on an Agilent BioAnalyzer 2100 or RNA Screen 241 Tape on an Agilent TapeStation 2200. One hundred ng of total RNA was processed for 242 hybridization to Affymetrix Human Gene ST 2.0 microarrays using the Affymetrix GeneChip WT 243 PLUS Reagent Kit according to the manufacturer’s recommended protocol. The signal 244 amplification protocol for washing and staining of eukaryotic targets was performed in an 245 automated fluidics station (Affymetrix FS450) using Affymetrix protocol FS450_0002. 246 arrays were scanned in the GCS3000 laser scanner with autoloader and 3G upgrade 247 (Affymetrix). Quality assessment of hybridizations and scans was performed with Expression 248 Console software (Affymetrix). The Peretz et al. 11 249 250 Statistical Analyses: 251 For analysis of virus titers, cytokine/chemokine levels, and real-time PCR data, comparisons 252 among treatment groups were performed using multivariate analysis of variance (MANOVA) (for 253 repeat measures) followed by planned comparisons or one-way analysis of variance (ANOVA) 254 with appropriate post hoc tests using SigmaPlot 12 (Systat Software). For microarray analyses, 255 Partek Genomics Suite version 6.6 was used, with the RMA (Robust Multi-chip Average) 256 Algorithm used for background correction, normalization, and summarization of probes. 257 ANOVAs with linear contrasts were performed to generate relative fold change, p-values, and 258 gene lists. Statistical significance was assigned at p≤ 0.05. 259 260 Results 261 Pre-treatment with E2 reduces viral titers in hNECs from female, but not male, donors 262 To test the hypothesis that E2 has antiviral effects on IAV infection, hNEC cultures from 263 female and male donors were pre-treated in the basolateral media with E2 (0.1, 1, or 10nM) or 264 vehicle for 24h prior to infection with IAV. During peak virus replication (i.e., 72-96hpi), E2 pre- 265 treatment of hNEC cultures from female (Fig 1A) but not male (Fig 1B) donors significantly 266 reduced virus titers as compared with vehicle treated hNEC cultures (p<0.05). We interpret 267 these data to suggest that E2 has a sex-specific antiviral activity in hNEC cultures. 268 To determine whether the duration of E2 exposure could shift the timing of the antiviral 269 effects of E2, hNEC cultures from female donors were exposed to E2 72 hours before or 24 270 hours after infection with IAV. Pre-treatment of hNEC cultures with E2 for 72 hours resulted in a 271 significant reduction in virus titers 48 and 72 hpi as compared with vehicle treated cultures 272 (p<0.05; Fig 2A), while treatment of hNEC cultures 24hpi significantly reduced virus titers at 273 72hpi (p<0.05; Fig 2B). Taken together, these data suggest that the antiviral activity of E2 in 274 hNEC cultures from female donors can be induced with treatments over an extended timeframe. Peretz et al. 12 275 276 E2 does not affect production of cytokines in response to IAV infection in female donors 277 Respiratory epithelial cells are significant producers of cytokines, chemokines, and type 278 III interferons in response to IAV infection (36, 49). To test the hypothesis that E2 reduces IAV 279 titers by altering host immune responses to infection, hNEC cultures from female donors were 280 pre-treated with E2 (0.1, 1, and 10nM) or vehicle for 24h prior to infection, and the apical 281 supernatants were analyzed at 72hpi (i.e., during peak virus replication) for production of a 282 panel of chemokines and type III interferons. Concentrations of IFNλ and all chemokines 283 measured, with the exception of CCL13 and CCL26, were significantly increased in IAV-infected 284 hNEC cultures as compared with mock infected cultures derived from females (p<0.05 in each 285 case; Table 1). In contrast to the immunomodulatory effects of E2 reported in reproductive 286 epithelial cells (11, 50, 52), E2 did not significantly alter secretion of any chemokine or IFNλ in 287 either the mock- or IAV-infected hNECs compared to the vehicle-treated hNECs. Therefore, the 288 antiviral effects of E2 on IAV infection do not involve altered apical production of IFNλ or 289 chemokines. 290 291 The antiviral effects of E2 require intracellular ESR2 signaling in hNECs from female 292 donors 293 The ER family is comprised of many ER and ER-like proteins, including the intracellular 294 genomic E2 receptors, ESR1 and ESR2, and the nongenomic G-protein coupled receptors 295 (e.g., GPER). To test the hypothesis that the antiviral effects of E2 were mediated by signaling 296 through genomic rather than nongenomic receptors, we pre-treated hNEC cultures from females 297 with E2 (10nM), the genomic ER blocker ICI 182, 780 (100nM), E2+ICI, or vehicle for 24h prior 298 to inoculation with IAV. Pretreatment of hNEC cultures with E2 significantly reduced virus titers 299 at 72 and 96 hpi as compared with vehicle-treated cells (p < 0.05; Fig 3), but the addition of ICI 300 with E2 reversed the antiviral effects of E2 resulting in virus titers that were indistinguishable Peretz et al. 13 301 from vehicle-treated cells (Fig 3). These data suggest that the antiviral effects of E2 are 302 mediated by genomic signaling through intracellular ERs. 303 To determine whether hNEC cultures expressed genomic and nongenomic ERs, we 304 measured transcripts of ESR1, ESR2, and GPER in hNECs derived from male or female donors 305 treated with either vehicle or E2 prior to mock- or IAV infection. At 24hpi, transcripts of GPER 306 were not detected in hNEC cultures from male or female donors (data not shown). Although 307 ESR1 was expressed in hNECs derived from both male and female donors, the expression level 308 was low and was not altered in the presence of E2 (Fig 4A). In contrast, ESR2 was expressed 309 to higher levels in hNECs derived from female than male donors following exposure to E2 (p< 310 0.05; Fig 4B). To evaluate the kinetics of genomic ER expression, transcripts of ESR1 and 311 ESR2 were measured 24 and 48hpi in hNEC cultures from female donors. Detection of ESR1 312 mRNA remained low at both 24 and 48hpi and was not altered by treatment with E2 (Fig 4C). In 313 contrast, treatment of hNECs from females with E2 significantly increased the expression of 314 ESR2 at 24hpi, but not 48hpi (p<0.05; Fig 4D). 315 To confirm that hNEC cultures derived from female donors expressed genomic ER 316 proteins, cell lysates at 24hpi were subjected to Western Blot analysis. At 24hpi, ESR2, but not 317 ESR1, was detected in hNECs derived from females (Fig 5A and B). Both proteins were 318 detected in MCF-7 cells, indicating the lack of ESR1 expression in hNEC cultures was not due 319 to an inability of the antibodies to detect the protein. Taken together, these data suggest that the 320 activation of ESR2 by E2 in female, but not male, hNECs mediate the sex-specific antiviral 321 effects of E2. . 322 323 E2 reduces metabolic processes in hNEC cultures from females following IAV infection 324 To uncover potential pathways affected by E2-ESR2 signaling in hNEC cultures derived 325 from females, we conducted microarray analyses on RNA isolated at 24 and 48hpi. To 326 determine the selective effects of E2 on gene expression during IAV infection, samples from Peretz et al. 14 327 IAV-infected cultures were normalized to mock-infected cultures from the same hormone 328 treatment condition. Overall, significantly more genes were altered by E2-treatment at 24 329 compared with 48hpi. Using a fold change of 1.3 and p<0.05, we determined that 666 330 transcripts were differentially expressed in hNECs treated with E2 as compared with vehicle at 331 24hpi and only 234 transcripts were differentially expressed at 48hpi (Fig 6A). There were only 7 332 overlapping genes that were differentially expressed in hNECs treated with E2 as compared 333 with vehicle at both 24 and 48hpi (Fig 6A). Gene Ontology Enrichment revealed that the 334 biological functions with the greatest number of differentially expressed genes in hNECs treated 335 with E2 as compared with vehicle at 24hpi included organelle organization and cellular 336 metabolic processes, both of which received significant enrichment scores (i.e., > a score of 3; 337 Fig 6B). Further analyses revealed that a family of zinc finger protein (ZFP) genes was the 338 largest cluster of genes differentially expressed at 24hpi in response to E2 treatment of hNEC 339 cultures (Fig 6C). 340 To determine whether E2 could transcriptionally regulate the activity of these zinc finger 341 genes, we used Dragon ERE Finder version 3.0 (http:// http://datam.i2r.a-star.edu.sg/ereV3/) to 342 identify putative EREs in the promoter regions of ZFP genes. Of the 38 ZFP genes that were 343 downregulated during IAV infection by E2, 21 had at least one putative or known estrogen 344 response elements (EREs) present in their promoters (Fig 7A). Of the 21 ZFP genes that had 345 putative EREs in their promoters, 20 of these genes had two or more putative EREs, 11 of 346 which have been experimentally confirmed to bind to ERs (1). Zinc finger proteins play diverse 347 roles in regulating cellular function and responses to damage; their role in IAV infection, 348 however, is largely unknown. Of the 38 ZFP genes that were downregulated in the presence of 349 E2 during IAV infection, ZNF91, ZMYM6, and ZFAND4 were of particular interest because of 350 the large number of EREs present in their promoters (i.e., ZNF91 and ZMYM6) or because it 351 belongs to a family of ZFPs that can have antiviral activity (i.e., ZFAND4) (28). The effects of E2 352 on the expression of ZNF91, ZMYM6, and ZFAND4 transcripts were validated using real time Peretz et al. 15 353 RT-PCR, which confirmed that E2 significantly downregulated ZNF91 and ZMYM6 at 24hpi but 354 not 48hpi (p<0.05; Fig 7B). While ZFAND4 expression was reduced at 24hpi, this did not 355 achieve statistical significance (p=0.057; Fig 7B). Taken together, these data suggest that E2 356 has the potential to directly regulate transcription of ZFP genes, which may provide a novel 357 mechanism for reducing late stage virus replication. 358 359 Estrogenic chemicals that selectively bind to ESR2 reduce IAV titers in hNECs from 360 females 361 Selective estrogen receptor modulators are a class of FDA-approved therapeutic 362 estrogenic chemicals, while BPA is a xenoestrogen forming the backbone of various plastic and 363 consumer products. These estrogenic chemicals have differential affinity for ERs in a variety of 364 tissues (21). To determine if compounds that bind genomic ERs could decrease IAV titers, 365 similar to E2, hNEC cultures from females were pre-treated with raloxifene, clomiphene citrate, 366 ospemifene, BPA, or vehicle 24h prior to infection with IAV. Raloxifene, but not clomiphene 367 citrate or ospemifene, significantly reduced viral titers at 72 and 96hpi as compared with vehicle- 368 treated cultures (p< 0.05; Fig 8A). Treatment of hNECs with BPA also significantly reduced viral 369 titer at 48 and 72hpi compared to vehicle-treated hNECs (p<0.05; Fig 8B). Both raloxifene and 370 BPA have stronger binding affinities for ESR2 than ESR1 (24), suggesting that chemicals that 371 selectively bind ESR2 have antiviral activity against IAV infection of respiratory epithelial cells 372 from females. 373 374 Discussion 375 In this study, E2 and select estrogenic chemicals had antiviral effects against IAV 376 infection. These estrogenic compounds reduced peak viral titer, which did not involve changes 377 in the secretion of chemokines or IFNλ, but rather was associated with reduced metabolic 378 processes. The effects of estrogens were specific for hNEC cultures from female but not male Peretz et al. 16 379 donors. The antiviral effects were most likely mediated by signaling through ESR2 as ESR2, but 380 not ESR1 or GPER, was expressed in hNEC cultures and the protective effects of E2 were 381 eliminated in the presence of the genomic ER antagonist, ICI 182,780. 382 Antiviral effects of E2 and estrogenic chemicals have been reported previously against 383 viruses including HIV, Hepatitis C virus (HCV), Ebola virus, and human cytomegalovirus 384 (HCMV). Estradiol can prevent HIV transcription by blocking HIV promoter activity in peripheral 385 blood mononuclear cells (PBMCs) and preventing HIV entry in CD4+ T cell and macrophages 386 (48, 55). Estradiol also prevents the production of infectious HCV particles (12). Certain FDA- 387 approved SERMs inhibit Ebola and other Marburg viruses in vivo and in vitro (17). Further, 388 SERMs, including clomiphene and raloxifene, inhibit HCV infection at multiple stages of the 389 virus life cycle and, raloxifene, in particular, acts as an adjuvant to improve antiviral HCV 390 therapies in postmenopausal women (9, 37). While E2 has antiviral activities against a wide 391 range of viruses, it is still not clear whether the molecular mechanisms involved are conserved 392 across virus families or result from changes in different cellular pathways resulting from the 393 broad effects of E2 on cellular gene expression. Implications of these findings are far reaching 394 as a significantly greater proportion of the world population is exposed to IAV and suffer from 395 influenza annually than Ebola, HCV, HCMV, or HIV (61). 396 The inhibition of IAV infectious virus production in E2 or SERMs treated hNECs from 397 female donors only occurred at late times post-low MOI infection, with the magnitude of the 398 antiviral effects being greater when cells were treated prior to rather than after the initiation of 399 infection. Because the inhibition of virus titer occurs at a time when the infection in the hNECs is 400 no longer synchronized among the cells in the cultures, the E2-induced reduction in titer could 401 be resulting from E2 effects at multiple stages of the virus life cycle (i.e., entry, replication, re- 402 infection). Therefore, we hypothesized that there may be some combination of host response 403 and virus infection occurring synergistically to impair virus replication at later time-points of 404 infection. Peretz et al. 17 405 Our microarray data indicate that E2 significantly alters the expression of genes involved 406 in metabolic processes. Within the differentially regulated genes comprising metabolic 407 processes, the largest family of E2-downregulated genes in IAV-infected hNECs from females 408 was those that encode for ZFPs. Very little is known about the function of many of these ZFPs, 409 let alone their potential roles in the IAV life cycle. In general, ZFPs are transcriptional regulators 410 that can induce or repress host gene transcription (25). Because these ZFPs are all similarly 411 downregulated in response to E2 treatment and IAV infection and expressed EREs in their 412 promoters, this may point to a common transcription factor or activation pathway responsible for 413 the antiviral effects of E2. There is a growing appreciation of the importance of various 414 metabolic, cell cycle, and lipid metabolism pathways for productive IAV infection (60) and 415 downregulation of these ZFPs may be exerting an antiviral activity by altering those pathways. 416 Both ESR1 and ESR2 are present in the upper and lower respiratory tract and are 417 required for the development and function of the lung, but exhibit distinct cell-type specific 418 expression patterns (5, 15, 29). ESR2 has been found in bronchial epithelial cells and alveoli, 419 whereas ESR1 is mostly limited to alveolar macrophages and endothelial blood vessel cells, 420 with modest expression in bronchial epithelial cells (15, 29, 40, 58). In primary human bronchial 421 epithelial cells (HBECs) and HBEC cell lines from males and females, the amount of ESR2 is 422 almost doubled compared to ESR1 (15). In the nasal mucosa, ESR2 is also the dominant ER 423 present and, in some studies, the only ER detectable (34, 43, 53), which is consistent with our 424 data. Similar to our results, in lung adenocarcinoma cells, only the ERs in cells from females 425 respond to E2 and other ER ligands (7). Although no studies have investigated the ESR1:ESR2 426 relationship in the respiratory tract, in mammary, uterine, and prostate tissue, where both 427 subtypes of ER are expressed, ESR2 is antagonistic to ESR1, inhibiting ESR1-mediated gene 428 expression (13, 31). The expression of ESR2 has also been shown to alter the recruitment of 429 ESR1 transcriptional co-factors and increase the degradation of ESR1, suggesting that ESR2 Peretz et al. 18 430 can mediate or dominate ESR1 signaling in the same cell (31, 32), which may explain why low 431 levels of ESR1 mRNA, but not ESR1 protein, is detectable in hNECs. 432 ESR1 and ESR2 have similar DNA binding homology but only share 57% homology in 433 their ligand binding domains, contributing to differences in transcriptional activities and tissue- 434 specific cellular responses triggered through ligand-dependent ER activation (27). For example, 435 E2, through ESR1, the dominant receptor in the female reproductive tract, decreases the 436 production of human beta-defensin 2 (HBD2) and elafin in the vaginal epithelium, but increases 437 HBD2 and elafin in the uterine epithelium (62). ESR2 is required for overall lung function, 438 whereas ESR1 is required to control inflammation in the lung (35, 58). In mice, signaling through 439 ESR1, but not ESR2, reduces pulmonary concentrations of proinflammatory cytokines and 440 chemokines in the lungs and improves the outcome of influenza in female mice (47). In addition 441 to the tissue type, the biological effects of E2 are contingent on the concentration of E2. 442 Physiological levels of E2, signaling through ESR1, promote proinflammatory type 1 IFN 443 production via TLR stimulation and induction type 1 IFN genes (23). Conversely, high E2 levels 444 consistent with those found prior to ovulation and during pregnancy are protective against 445 excessive inflammatory responses (54). In our study, physiologically relevant levels of E2 had 446 no effect on the induction of chemokines or IFNλ in cells from the upper respiratory tract. This 447 may reflect a fundamental difference between signaling through ESR2 in upper respiratory tract 448 epithelial cells and signaling through ESR1 in immune cells in the lower respiratory tract and 449 reproductive tract. Future studies will need to compare ER signaling in mouse and human 450 epithelial and immune cells in the upper and lower respiratory tract to definitively resolve the 451 differences in how E2 protects against IAV in both hNECs and mice. Collectively our data 452 illustrate that cell type-specific differences in ER expression result in differential modes of 453 protection. 454 In the current study, of the SERMs tested, only raloxifene and BPA significantly 455 decreased IAV titer in a manner similar to E2. Raloxifene can bind to both ESR1 and ESR2, but Peretz et al. 19 456 has a higher affinity for ESR2 (16). Further, raloxifene binding to ESR2 results in an increase in 457 ESR2 reporter gene expression, but minimal expression after binding to ESR1 (39). BPA has 458 can have varying affinity for ERs depending on the cell or tissue in which it was measured (24). 459 Ospemifene can bind both ERs with similar affinity, and, while the affinities of clomiphene citrate 460 for ESR1 and ESR2 are unknown, clomiphene citrate is a well-documented ESR2 antagonist, 461 inhibiting ESR2-mediated cellular events. We hypothesize that ospemifene and clomiphene 462 citrate did not inhibit virus replication because they do not signal primarily through ESR2 (21). 463 The data from the present study implicate signaling through ESR2 as being critical for the 464 antiviral effects of E2 in hNEC cultures from female donors. 465 After the Women’s Health Initiative raised concerns about estrogen replacement 466 therapy, use of SERMs as safer alternatives has greatly increased in the United States (21). 467 Repurposing SERMs as anti-virals could be a beneficial and a novel therapeutic for the many 468 women currently prescribed SERMs for other diseases. The expression of ERs in the 469 respiratory tract implies that E2 and SERMs can affect the function of tissues and organs 470 outside of the reproductive tract. Understanding these effects will help shed light on additional 471 novel functions of E2 in pulmonary cellular physiology. 472 473 Acknowledgements 474 We thank the Klein and Pekosz laboratory members for insightful discussions about these data. 475 We thank Anne Jedlicka and Amanda Dziedzic of the JHSPH Genomic Analysis and 476 Sequencing Core for assistance with microarray analyses. 477 Grants 478 This work was funded by grants from the Center for Alternatives to Animal Testing (2013-09; 479 SLK) and NIH (R01AI097417 [AP], HHSN272201400007C [AP], R01AI72502 [APL], and T32 480 AI007417 [JP]). 481 Author contributions Peretz et al. 20 482 SLK, JP, and AP designed the experiments, interpreted results, and wrote the manuscript; JP 483 conducted the experiments and drafted the figures and tables; APL provided cultures, discussed 484 data, and provided critical feedback on the manuscript. 485 Disclosures 486 The authors have no disclosures. 487 488 Peretz et al. 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 21 References 1. 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Relation between phase of menstrual cycle and emergency department visits for acute asthma. Am J Respir Crit Care Med 162: 512-515, 2000. Peretz et al. 25 660 Figure Legends 661 Figure 1. 17β-estradiol (E2) inhibits infectious virus production in hNECs from female, 662 but not male, donors. hNEC cultures from (A) female or (B) male donors were pre-treated with 663 E2 (0.1, 1, and 10nM) or vehicle for 24 hours in the basolateral media, then infected with IAV 664 (MOI = 0.1 TCID50/cell) via the apical membrane. Supernatants were collected every 24 hours 665 post infection (hpi) and virus titers were analyzed by TCID50 assay. The limit of detection is 666 indicated by a dotted line. The data represent means ± SEMs. Asterisks (*) indicate that E2- 667 treated cultures were significantly different from sex-matched vehicle controls based on a 668 MANOVA followed by planned comparisons, with n= 15 hNEC wells per treatment group, 669 p<0.05. 670 671 Figure 2. Extended E2 pre-treatment and E2 treatment post-infection inhibits infectious 672 virus production in hNECs from female donors. hNEC cultures from females were (A) pre- 673 treated with E2 (10nM) for 72 hours prior to IAV infection or (B) treated with E2 (10nM) 24 hours 674 after infection with IAV (MOI = 0.1 TCID50/cell). Supernatants were collected every 24 hours 675 post infection (hpi) and virus titers were analyzed by TCID50 assay. The limit of detection is 676 indicated by a dotted line. The data represent means ± SEMs. Asterisks (*) indicate that E2- 677 treated cultures were significantly different from vehicle controls based on a MANOVA followed 678 by planned comparisons, with n= 12 hNEC wells per treatment group, p<0.05. 679 680 Figure 3. The estrogen receptor antagonist, ICI 182,780, reverses the effects of E2 on 681 virus titers in hNECs from females. hNEC cultures from female donors were pre-treated with 682 E2 (10nM), ICI (100nM), E2+ ICI, or vehicle for 24 hours in the basolateral media, then infected 683 with IAV (MOI = 0.1 TCID50/cell) via the apical membrane. Supernatants were collected every 684 24 hours post infection (hpi) and virus titers were analyzed by TCID50 assay. The limit of 685 detection is indicated by a dotted line. The data represent means ± SEMs. Asterisks (*) indicate Peretz et al. 26 686 that E2-treated cultures were significantly different from vehicle controls based on a MANOVA 687 followed by planned comparisons, with n= 12 hNEC wells per treatment group, p<0.05. 688 689 Figure 4. E2 stimulates the expression of ESR2, but not ESR1, mRNA in hNECs from 690 female donors only. hNEC cultures from female and male donors were pre-treated with E2 691 (10nM) or vehicle for 24 hours in the basolateral media, infected with IAV (MOI = 0.1 692 TCID50/cell) via the apical membrane, and after 24 hours, the cells were collected for analysis of 693 ESR1 (A) and ESR2 (B) expression. In hNECs from females only, the kinetics of mRNA 694 expression of ESR1 (C) and ESR2 (D) was analyzed in cultures collected at 24 and 48 hours 695 post infection (hpi). The fold change of ESR1 and ESR2 mRNA was determined by the ΔΔCt 696 method using 18sRNA as the reference gene. The data represent means ± SEMs with the 697 stippled line indicating the normalized expression level of genes in vehicle-treated, mock- 698 infected cultures. An asterisk (*) indicates a significant difference from the mock vehicle control. 699 One-way ANOVA and Tukey post-hoc tests, n= 3-5 hNEC wells per treatment group per sex, 700 p<0.05. 701 702 Figure 5. hNEC cultures derived from female donors express ESR2, but not ESR1, 703 protein. hNEC cultures from female donors were pre-treated with E2 (10nM) or vehicle for 24 704 hours in the basolateral media, then infected with IAV (MOI = 0.1 TCID50/cell) via the apical 705 membrane. After 24 hours, the cells were lysed and subjected to Western Blot analysis for 706 ESR1, ESR2, and ACTB measurements (A). Protein isolated from MCF-7 cells was used as a 707 positive control for estrogen receptor expression. Quantification of ESR1 and ESR2 relative to 708 ACTB was quantified by ImageJ analyses (B). 709 710 Figure 6. E2 treatment reduces metabolic processes in IAV-infected hNECs from females. 711 hNEC cultures from female donors were pre-treated with E2 (10nM) or vehicle for 24 hours in Peretz et al. 27 712 the basolateral media, then infected with IAV (MOI = 0.1 TCID50/cell) via the apical membrane. 713 At 24 and 48 hours post infection (hpi), cells were harvested, RNA was isolated, and spotted on 714 Affymetrix Human GeneST2.0 arrays. Data from infected hNECs were normalized to uninfected 715 hNECs within the same treatment group and ANOVAs in Partek Genomics Suite version 6.0 716 were used to determine significant differences between E2- and vehicle-treated, IAV-infected 717 hNECs. The Venn diagram (A) illustrates the number of differentially expressed genes at 24 and 718 48hpi. Gene ontology (B) was used to group genes differentially expressed between E2- and 719 vehicle-treated, IAV-infected hNECs at 24hpi into functional hierarchies based on enrichment 720 score, with scores >3 indicating significant differences. (C) A heat map was created using 721 unbiased hierarchical clustering to represent the largest family of differentially expressed genes 722 (i.e., genes that encode zinc finger proteins) between E2- and vehicle-treated, IAV-infected 723 hNEC cultures at 24hpi. 724 725 Figure 7. Identification of putative estrogen response elements in zinc finger protein 726 gene promoters. (A) The Dragon ERE Finder version 3.0 (http:// http://datam.i2r.a- 727 star.edu.sg/ereV3/) was used to identify putative estrogen response elements (EREs) in the 728 promoters of zinc finger protein (ZFP) genes. The WebLogo sequence generator was used to 729 develop a graphical representation of the ERE nucleic acid sequence conservation (GGTCA- 730 nnn-TGACC) among the identified ZFP genes (6). (B) Cells were collected for analysis by real 731 time RT-PCR to validate the ZNF91, ZMYM6, and ZFAND4 mRNA expression levels. Fold 732 change of the target genes was determined by the ΔΔCt method using 18sRNA as the 733 reference gene. The data represent means ± SEMs with an asterisk (*) indicating significant 734 differences compared to vehicle based on student’s t-tests at each time-point, n= 4-5 hNEC 735 wells per treatment group, p<0.05. 736 Peretz et al. 28 737 Figure 8. Select estrogenic compounds with affinity for ESR2 reduce virus titers in 738 hNECs from female donors. hNEC cultures from female donors were pre-treated with vehicle 739 and either (A) selective estrogen receptor modulators, including clomiphene citrate, ospemifene, 740 and raloxifene or (B) bisphenol (BPA) for 24 hours in the basolateral media and infected with 741 IAV (MOI = 0.1 TCID50/cell) via the apical membrane. Supernatants were collected every 24 742 hours post infection (hpi) and virus titers were analyzed by TCID50. The limit of detection is 743 indicated by a dotted line. The data represent means ± SEMs. An asterisk (*) indicates a 744 significant difference between vehicle-treated hNECs and raloxifene-treated (A) or BPA-treated 745 (B) based on 1-way ANOVAs and Tukey post-hoc tests, n= 9 hNEC wells per treatment group, 746 p<0.05. 747 748 Table 1. Effects of E2 on cytokine production in hNECs from female donors. hNEC 749 cultures from female donors were pre-treated with E2 (0.1, 1, and 10nM) or vehicle for 24 hours 750 in the basolateral media, then infected with IAV (MOI = 0.1 TCID50/cell) via the apical 751 membrane. Supernatants collected at 72 hours post infection (hpi) were analyzed by MSD 752 assay for human chemokines or ELISA for IFNλ. Data represent means ± SEMs. N.D. indicates 753 not detectable. E2 had no effect on chemokine or interferon production in hNECs from female 754 donors. An asterisk (*) indicates significant differences between the IAV-infected and mock- 755 infected hNECs within a treatment group, based on a 2-way ANOVA followed by Tukey post- 756 hoc tests, n= 3-9 hNEC wells per treatment group, p<0.05. Table 1. Effects of E2 on chemokine and interferon production in hNECs from females Mock Protein† (pg/mL) CCL11 CCL26 CXCL8 CXCL10 CCL2 CCL13 CCL22 CCL3 CCL4 CCL17 IFNλ IAV E2 (nM) E2 (nM) Vehicle 13.1 ±2.64 5.71 ±0.51 1340 ±302 2.50 ±0.56 0.32 ±0.09 14.7 ±3.38 17.5 ±2.59 21.1 ±3.09 6.73 ±0.70 4.31 ±0.30 0.1 19.7 ±1.83 6.56 ±0.92 715 ±78.0 1.88 ±0.26 0.38 ±0.08 12.4 ±1.89 15.7 ±4.79 28.4 ±2.56 6.07 ±0.81 3.93 ±0.32 1 15.9 ±2.58 6.31 ±0.68 1100 ±326 9.46 ±3.65 0.17 ±0.05 13.3 ±1.39 17.8 ±2.14 27.8 ±2.27 7.04 ±0.78 4.00 ±0.25 10 15.6 ±1.39 5.82 ±0.72 824 ±105 2.50 ±0.42 0.32 ±0.12 11.7 ±2.78 16.9 ±2.76 21.3 ±2.07 5.16 ±0.57 4.36 ±0.25 N.D. N.D. N.D. N.D. Vehicle *103 ±10.5 2.27 ±0.51 *2920 ±386 *14100 ±2600 *4.82 ±0.54 18.5 ±3.42 *115 ±18.2 *76.4 ±6.09 *42.4 ±4.69 *23.1 ±2.41 *20100 ±7540 0.1 *116 ±17.5 1.87 ±0.62 *2940 ±414 *14900 ±3080 *5.16 ±0.63 13.2 ±1.47 *164 ±23.8 *137 ±51.3 *48.2 ±6.36 *32.1 ±5.61 *14200 ±4060 1 *129 ±16.9 3.51 ±0.85 *2840 ±479 *18400 ±3870 *4.22 ±0.53 14.3 ±2.88 *164 ±26.7 *86.4 ±7.66 *44.2 ±5.06 *25.1 ±3.69 *14800 ±4960 † data presented as mean ± SEM * IAV > Mock within treatment group based on 2-way ANOVA;, p ≤ 0.001 10 *102 ±9.10 2.43 ±0.84 *3070 ±466 *15100 ±3010 *5.32 ±0.61 16.0 ±1.82 *110 ±16.5 *83.5 ±6.80 *45.2 ±4.52 *23.1 ±2.10 *16800 ±6850
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