Research and Development Triennial Report 2009-12 Cover Image. (Left) An immature reticulocyte, caught in the act of enucleation. The cell was cultured, ex vivo, from adult peripheral blood CD34+ progenitor cells. Copyright statement. This research was originally published in Blood. Griffiths RE, Kupzig S, Cogan N, Mankelow TJ, Betin VM, Trakarnsanga K, Massey EJ, Lane JD, Parsons SF, Anstee DJ. Maturing reticulocytes internalize plasma membrane in glycophorin A – containing vesicles that fuse with autophagosomes before exocytosis. Blood. 2012; 119:6296-306. © the American Society of Hematology. Pseudocolored scanning electron micrograph courtesy of Sabine Kupzig. See the article by David Anstee on page 31. (Right) Megakaryocytes grown in vitro from induced pluripotent stem cells. See the article by Dr Cedric Ghevaert on page 42. Research and Development Triennial Report 2009-12 Contents Foreword...............................................................................................................................5 Introduction..........................................................................................................................6 Theme 1 – Donor health and behaviour INTERVAL study, Professor John Danesh and Professor David Roberts ................................................. 10 Cambridge BioResource and National Institute for Health Research (NIHR) BioResource for Rare Diseases, Dr Nicola Foad, Dr Sarah Morley, Dr Jennifer Sambrook....................... 11 Theme 2 – Transfusion/transplantation virology and microbiology Transfusion microbiology with respect to the microbiological safety of blood, tissues and organs, Professor Richard Tedder.................................................................................................................... 12 Virological blood safety, Professor Jean-Pierre Allain........................................................................... 13 Reactivation of common viruses in patients receiving chemotherapy or immunosuppressive drugs, Dr Daniel Candotti............................................................................................................................. 14 Blood donors, viral infections and malaria in Ghana, Professor Jean-Pierre Allain................................. 15 A screening test for anti-malarial antibodies, Professor David Roberts.................................................. 16 Non-coding RNAs in cytomegalovirus infection, Dr Lars Dölken ......................................................... 17 Transfusion medicine epidemiology review: TMER, Dr Patricia Hewitt.................................................. 19 Screening assays for Prion disease, Professor David Anstee ................................................................. 20 Theme 3 – Appropriate and safe use of blood components Transfusion alternatives before surgery in Sickle Cell Disease (TAPS), Dr Lorna Williamson.................... 21 Studies into the clinical effectiveness of platelet transfusions and the optimal product, Dr Simon J Stanworth........................................................................................................................22 Use of information technology to deliver safer and more effective transfusion practice, Professor Mike Murphy......................................................................................................................23 Systematic Review Initiative (SRI), Professor Mike Murphy................................................................... 24 NHSBT/Medical Research Council – Clinical Studies Unit, Dr Charlotte Llewelyn................................... 25 Components Development Laboratory, Dr Rebecca Cardigan.............................................................. 27 Theme 4 – Erythrocyte biology and immunology Making and manipulating red blood cells in health and disease, Dr Ashley Toye.................................. 29 Structure and function of red blood cells, Professor David Anstee....................................................... 31 Erythropoiesis in health and disease, Professor David Roberts.............................................................. 32 Red cell diagnostics, Professor Marion Scott.......................................................................................34 Research and Development Triennial Report 2009-12 3 Contents Theme 5 – Platelet biology and genomics Placing signposts in the genome for the formation and function of platelets, Professor Willem Ouwehand..............................................................................................................36 Functional genomics interpretation of the genetic determinants of haematological parameters, Dr Augusto Rendon........................................................................................................................... 37 A blueprint of haematopoietic epigenomes, Professor Willem Ouwehand...........................................39 Elucidating the function of novel genes in haematopoiesis in zebrafish, Dr Ana Cvejic.........................40 Platelet biology and quantitative trait loci, Stephen Garner and Dr Peter Smethurst............................. 41 In Vitro production of platelets for transfusion, Dr Cedric Ghevaert..................................................... 42 A study of the HPA-1a Antibody Response in Neonatal Alloimmune Thrombocytopenia (NAIT), Professor David Roberts...................................................................................................................... 43 Recombinant antibody for treatment of fetomaternal alloimmune thrombocytopenia, Dr Cedric Ghevaert............................................................................................................................44 Theme 6 – Organ donation and transplantation Quality in Organ Donation (QUOD), Professor Rutger J Ploeg.............................................................. 45 Impact of donor factors on transplant outcome, Professor Dave Collett...............................................46 Allocation of organs for transplantation, Rachel Johnson.................................................................... 47 Cancer in transplant recipients, Professor James Neuberger.................................................................48 Theme 7 – Stem cells and immunotherapies Immunogenetic markers in transfusion and transplantation, Dr Cristina Navarrete and Dr John Girdlestone....................................................................................49 Immunoregulatory properties of cells derived from umbilical cord and cord blood, Dr Cristina Navarrete and Dr John Girdlestone....................................................................................50 Improving cord blood transplant outcomes by understanding the bone marrow niche, Professor Suzanne Watt..................................................................................................................... 52 Stem cell therapies for heart disease, Dr Enca Martin-Rendon and Professor Suzanne M Watt.............54 Regulatory T-cell therapy for graft verse host disease following human stem cell transplantation, Dr Wei Zhang, Professor Suzanne Watt and Professor David Roberts................................................... 55 Developing antigen-specific adoptive cellular immunotherapy for CMV and EBV, Dr Frederick Chen....56 Stem cells in leukaemia, Dr Allison Blair.............................................................................................. 57 Theme 8 – Molecular and tissue engineering Development of 2nd and 3rd generation tissue grafts, Professor John Kearney....................................58 Tissue Development Laboratory – from research to service, Dr Paul Rooney......................................... 59 Creating new blood vessels for tissue repair, Professor Suzanne Watt..................................................60 The work of the Clinical Biotechnology Centre in supporting molecular therapy trials, Dr Paul Lloyd-Evans............................................................................................................................ 61 Awards and honours 2009-11............................................................................................62 Publications 2009-11...........................................................................................................63 Patents 2009-12..................................................................................................................73 4 Research and Development Triennial Report 2009-12 Foreword I have been delighted to chair NHSBT’s Research and Development (R&D) Committee for the past three years. There is no doubt that both research and development are fundamental to NHSBT’s overall status as a forward-looking, flexible organisation. An active R&D programme maintains credibility with customers, contributes significantly to our highly rated international reputation for scientific excellence and enables us to attract medical and scientific talent. All of which benefits both teaching and service provision. The last three years saw further evolution of NHSBT’s research programme, to ensure across-the-board underpinning of the organisation’s objectives in organs, blood, stem cells and tissues, while maintaining high scientific quality. In 2010, international experts undertook the quinquennial scientific peer review of our research programmes. I am delighted to report that this concluded that the research programmes led by our PIs are world class in the areas of erythrocyte biology, virology, cellular engineering, clinical studies and platelet genomics. In addition, translational research was considered strong in the areas of tissues and red cell diagnostics. As always, the challenge is to ensure that research and routine services are appropriately connected with each other. In order to achieve this, we have established eight strategy groups which link research, development and operations. Their influence in shaping our research programme will undoubtedly grow in the coming years. I am very pleased that we have launched two new coordinated research programmes. The first is in the area of donor health and behaviour and the second is in organ donation and transplantation. With a predicted increase in demand for blood over the next decade, it is critical that we avoid detriment to donors’ health and wellbeing, while maximising donation opportunities. The new programme in donor health and behaviour aims to achieve both these goals. Our donors have also contributed to NHS biobanking activities, thus extending their gift to research into common diseases such as diabetes and coronary artery occlusion. In organ donation and transplantation, we will create a UK-wide organ biobank to underpin vital studies to improve the number and quality of organs for donation. Remembering that three patients die each day in the UK from lack of an organ, research to predict which organs can be used is essential, along with strategies to maintain their viability between retrieval and transplantation. It is, of course, critical to ensure that our research strength continues into the future. The recruitment of five new Principal Investigators and a strong programme for trainees and clinical fellows has injected new vigour into the team. Despite financial pressures, our researchers have continued to attract an excellent level of external funding, and their efforts maintain NHSBT as a leading scientific blood and transplant organisation. From molecular diagnostics to manufacture of blood cells from stem cells, our research programme continues to provide translation of science into new products and services. Finally, I would very much like to thank the external international experts on our R&D committee, Professors Harvey Klein, Lucio Luzzatto and Rutger Ploeg, who give up so much time in diligent preparation and whose advice is invaluable in our strategic decision making. This Triennial Report demonstrates the range and depth of NHSBT’s research programme, which bodes well for the organisation’s future. Bill Fullagar Chair, NHSBT Chair of R&D Committee. Research and Development Triennial Report 2009-12 5 Introduction The last three years has been an exciting time for Research and Development (R&D), with renewal of funding from the National Institute of Health Research (NIHR), scientific and structural reviews leading to Board approval of a reshaped four-year research strategy and recruitment of a new cadre of Principal Investigators (PIs). Advances in molecular diagnostics and generation of blood cells from stem cells have moved apace, and we have also launched new strategic initiatives in donor population health (INTERVAL trial) and organ transplant biobanking to support research aimed at improving organ numbers and quality (QUOD programme). Research across NHSBT now involves 17 PIs, close to 200 staff and a total budget of – £16M/yr. The main research sites, in collaboration with University partners, are Cambridge, Oxford, London and Bristol, with specialist activity in Birmingham and Liverpool. Our supporting infrastructure consists of the Clinical Biotechnology Centre (Bristol), which manufactures GMP-grade biologicals for Phase 1 clinical trials, the NHSBT/MRC Clinical Studies Unit (Oxford/Cambridge/London), which supports clinical studies and trials, the Systematic Reviews Initiative (Oxford) and the Statistics and Clinical Audit team (Bristol). NIHR programmes In late 2009, NIHR invited us to rebid for a new five-year cycle of funding, superseding the funding we already received. In a very short space of time, four high quality programmes were submitted to a total value of £14M over five years, and funding was approved in full for Programmes B-D. Since Programme A was new and innovative, NIHR asked for an 18 month checkpoint report. Just before this Triennial Report went to press, we heard the excellent news that funding has now been approved in full for the remainder of this programme. The individual programmes are: • Programme A: Molecular and Tissue Engineering. Co-ordinator Professor Amit Nathwani • Programme B: Megakaryocyte and Platelet Biology and Genomics. Co-ordinator Professor Willem Ouwehand • Programme C: Stem Cell and Immunotherapies: Improving Bone Marrow Transplant Outcomes. Co-ordinator Professor Suzanne Watt, and, • Programme D: Erythropoiesis in Health and Disease. Co-ordinator: Dr David Roberts. These programmes form a major proportion of NHSBT’s laboratory research. Scientific and structural reviews In late 2010, our entire R&D programme underwent its scientific quinquennial review. Each major site was visited by a team of international reviewers who met with PIs, scientists and PhD students, the latter to discuss training. I am very grateful to the reviewers who gave up so much time to help us with these reviews, especially as two of them were then stuck in the UK for days afterwards by snow at Heathrow! 6 Research and Development Triennial Report 2009-12 The review teams were: • Cambridge: Professor Harvey Klein, Professor Kenneth Clemetson • Filton: Professor Lucio Luzzatto, Professor Martin Olsson • Oxford: Professor Mo Blajchman, Professor Jeff McCullough, and • ODT: Professor Rutger Ploeg, Professor Anthony Hollander. The main conclusions were that the research programmes were world class in the areas of erythrocyte biology, virology, cellular engineering, clinical studies and platelet genomics, and that translational research is strong in the areas of tissues and red cell diagnostics. Research in organ transplantation was strong, but was considered to require greater resources and better co-ordination in order to achieve a quantum leap in output and translation. This and other very helpful recommendations have been crucial in reshaping the R&D programme. A parallel review of the organisation of research and its links with the rest of NHSBT’s activities concluded that connections between research, development and operational business were variable, and could be strengthened in all areas. In addition, it was considered that accountability for progress on research projects could be more streamlined, and that the infrastructure to support R&D needed to be strengthened to support the expansion in activity and complexity of regulation. New research strategy Taking the recommendations from the reviews into account, in early 2011, NHSBT’s Board approved a new four-year research strategy, which organised research into eight themes linked to areas of business. The intention is that the programme will be increasingly developed by a strategy group for each theme, comprising research, development and operational staff. The research themes approved in the 2011 strategy are: 1. Donor health and behaviour 2. Transfusion and transplantation virology and microbiology 3. Appropriate and safe use of blood components 4. Erythrocyte (red cell) biology and immunology 5. Platelet biology and genomics 6. Organ donation and transplantation 7. Stem cells and immunotherapies, and 8. Molecular and tissue engineering. Most of these covered work already in place, but two new themes were added: Theme 1: (Donor health and behaviour) In collaboration with the University of Cambridge Department of Public Health and Primary care (Professor John Danesh), we have commenced a large strategic study (INTERVAL), which aims to provide evidence to determine policy on the optimal interval between blood donations. This study seeks to minimise the risk of iron deficiency/anaemia in donors while maximising the use of a diminishing donor pool. This ambitious study also has the potential to personalise the donor call up, by using genetic and other factors to predict tolerance to donation. Introduction R&D Income 2012-13 A new PI, Dr Emanuele di Angelantonio, has just been appointed to lead future development of this theme. Figure 1. R&D Income 2012-13 Theme 6: (Organ donation and transplantation) Although NHSBT has funded transplant projects since its inception in 2005, these were usually single centre, and focussed on management of the patient after transplantation. We have now reoriented this theme to reflect NHSBT’s responsibility for provision of high quality organs to the NHS. We have appointed a PI, Professor Rutger Ploeg, previously an international member of our R&D Committee, and now based in Oxford to lead this endeavour. In late 2011, funding was approved to establish an organ biobank to facilitate studies to improve organ quality. Blood Price Levy 11% Department of Health 3% External Income from research Grant in Aid Department of Health Blood Price Levy External 51% Grant in Aid 25% Income from research 10% A future aim is to explore partnerships to develop behavioural studies to promote increased blood and organ donation. Congratulations to Professor Willem Ouwehand who received a well-deserved Personal Chair at the University of Cambridge. Staff organisation and development We also said goodbye to two PIs who have retired: Professor Jean-Pierre Allain from Cambridge, and Dr Derwood Pamphilon from Bristol, both of whom contributed hugely over many years, and who will be much missed. Jean-Pierre Allain is an international leader in the field of transfusion virology, and his strong links with Ghana and other groups world-wide have provided new insights into the behaviour and spread of blood-borne viruses. His ‘retirement’ is likely to be as busy and productive as ever! NHSBT’s PIs are either clinicians (11) or scientists (6), and all hold either substantive or honorary University appointments. Medically qualified PIs are Honorary Consultants within NHSBT, and three scientist PIs also have high-level service responsibilities. We have strengthened the programme in the last three years with the appointment of five new NHSBT’s PIs in the areas of blood donor population health (Emanuele di Angelantonio), appropriate blood use (Simon Stanworth), virology (Lars Dölken), erythrocyte biology (Ashley Toye), and organ donation and transplantation (Rutger Ploeg). The PIs, the themes in which they work and their locations are shown in Table 1. Derwood Pamphilon’s work encompassed many facets. He was co-leader of the Cellular Therapies team in the international Biomedical Excellence for Safer Transfusion Table 1 – The Pls, the themes in which they work and their locations Theme Oxford Cambridge 1. Donor health and behaviour Dr Emanuele di Angelantonio (new 2012) 2. Transfusion and transplantation virology and microbiology Dr Lars Dölken (new 2011) 3. Appropriate and safe use of blood components Prof Mike Murphy Dr Simon Stanworth (new 2010) 4. Erythrocyte biology and immunology Prof David Roberts 5. Platelet biology and genomics Other Prof Richard Tedder (Colindale/UCL) Prof David Anstee Prof Marion Scott Dr Ashley Toye (new 2010) Prof Willem Ouwehand Dr Cedric Ghevaert (new 2010) 6. Organ donation and transplantation Prof Rutger Ploeg (new 2011) 7. Stem cells and immunotherapies Prof Suzanne Watt 8. Molecular and tissue engineering Bristol Chair of transfusion medicine (vacant) Dr Allison Blair* Dr Cristina Navarrete (Colindale/UCL) Prof Amit Nathwani (UCL) Prof John Kearney (Liverpool) Research and Development Triennial Report 2009-12 7 Introduction (BEST) collaborative, the Joint Accreditation Committee of the International Society for Cellular Therapy and European Group for Blood and Marrow Transplantation (JACIE). He leaves a wonderful legacy of his career as co-author of the awardwinning textbook ‘Practical Transfusion Medicine’, the fourth edition of which is in preparation. Budget from within NHSBT consists of £1.6M from blood price, which is used to fund initiatives in i) Donor health and behaviour, ii) Transfusion and transplantation virology and microbiology and, iii) Appropriate and safe use of blood components. There is also an ODT contribution of 100k (Theme 6). See Figure 1. To develop the next generation of talented researchers, funding has been ear-marked for eight clinical fellow posts to undertake two or three years full-time research. In addition, we receive funding from NIHR for post-graduate medical trainees who wish to follow an academic career. This allows them time for exposure to research in parallel with their clinical training, and the opportunity to undertake a fulltime PhD. We currently have five such trainees in Oxford and Cambridge, four of them are in haematology and one on an emergency medicine/anaesthetics care programme. Others are planned in virology and public health. PIs and senior scientists are also expected to raise funds from competitive external sources (industry, research councils, EU, NIHR competitive funding, charities). Although amounts available from external funders have reduced, the current figure is about £6M/yr. Most of this is run through partner universities, and can be used for more ‘blue sky’ research in support of the overall strategy. We have recently initiated a series of development days for PIs and their team-leaders. As well as sessions on Intellectual Property and research governance, team exercises aim to develop management skills to complement scientific expertise. Funding Research funding for this period was approximately £16M per year, comprising: Funding from the NHS of about £10.2M, derived as follows: • National Institute for Health Research: Four Programme Grants for five years (2010-15), totalling £2.8M/year • National Institute for Health Research: funding for salaries of NHS staff supporting research: £900k/year • National Institute for Health Research: (Flexibility and Sustainability Funding). Variable amounts are awarded annually in April using a formula, which takes into account external funding. Over the last three years, amounts have varied between £1.8M and £1.32M • Grant-in-Aid to Bristol’s International Blood Group Reference Laboratory/Bristol Institute of Transfusion Science £2.5M, and, • Income from research products, cell lines and licences £1M. R&D Expenditure Allocation by Theme 2012-13 Figure 2. R&D Expenditure allocation by theme 2012-13 Theme 8 18% Theme 1 7% Theme 2 10% Theme 3 4% Theme 7 13% Theme 6 5% Theme 5 9% 8 Theme Theme Theme Theme Theme Theme Theme Theme 1 2 3 4 5 6 7 8 Theme 4 34% Research and Development Triennial Report 2009-12 Allocation of funding to the eight research themes is shown in Figure 2. Governance Prior to the approval of the R&D Strategy in 2011, funding was divided between ‘core’ funding and project grants. Core funding was awarded to PIs on a five year basis, subject to satisfactory external review. Project grants of £250-500k over 3-5 years were open to any employee. In 2011, there were more than 25 individual project grants running, and since most applicants were from within PI groups, the strategy recommended that a greater proportion of funding be allocated to PIs against strategic ‘work packages’. This approach will produce a more focussed programme and reduce the administrative complexity. NHSBT will continue to have open calls for projects relating to organ procurement and clinical studies to which non-NHSBT staff can apply. The allocation of funding is undertaken by the R&D Committee of the Board, which meets twice each year and which includes operational Directors and International experts who provide an external view. I am very grateful to Harvey Klein (Professor of Transfusion Medicine, National Institute of Health, Bethesda, USA), Lucio Luzzatto (Professor of Haematology, University of Firenze, Florence, Italy) and Rutger Ploeg (Professor of Transplant Surgery, University Medical Centre, Groningen, Netherlands), who have acted as our external experts over the past three years and who give up a good deal of time to prepare for and attend meetings. Their input is invaluable. Research is conducted within the DH Research Governance Framework for Health and Social Care. NHSBT has an external contract for Intellectual Property support, which enables Freedom to Operate searches to be conducted as well as patenting and exploitation of new IP. Management of the programme has been strengthened by creation of an Assistant Director, Research and Development post (Dr Nick Watkins) and an enlarged R&D Senior Management Team chaired by myself. The R&D office team provide support and guidance to PIs. Contracts and IP have been overseen by Professor Marion Scott in her part-time role as R&D Manager. She will be relinquishing this role in Autumn 2012 to focus on research, and I am grateful to her and the rest of the team for all their support during this period of change. Introduction The Components Development Laboratory at Brentwood (Head: Dr Rebecca Cardigan) and the Tissue Development team at Liverpool (Head: Dr Paul Rooney) undertake programmes of work on product quality and safety in close collaboration with operational colleagues and customers. Outputs and benchmarking Research success in academia is conventionally measured by external grants awarded, and the publication of high impact papers. The embedding of PIs in Academic Institutions means that their outputs are assessed through the National Research Assessment Exercise. For a Blood Service, impacts on service activities and clinical practice are also key measures, although the translation of research findings into routine practice can take up to a decade eg cord stem cell banking. A new R&D group formed by the Alliance of Blood Operators will provide an opportunity to benchmark our activity against other blood services. Figure 3 shows annual peer-reviewed publications for the period 2009-11 . Publications by Calendar Figure 3.Peer-Reviewed P eer-Reviewed publications byYear calendar year 180 160 140 Number of publications Development 120 100 80 60 40 20 0 2009 2010 2011 Year Future plans The next three-year cycle will mainly be one of consolidation and delivery of the strategic programmes described above. This period will also include a consultation exercise from which the next cycle of programmes will be developed for the NIHR funding renewal date of 2015. The work presented in these pages confirms NHSBT’s position at the forefront of research and development in its field. Dr Lorna Williamson Medical and Research Director Research and Development Triennial Report 2009-12 9 Theme 1 Donor health and behaviour INTERVAL study Professor John Danesh and Professor David Roberts CONTRIBUTING TEAM MEMBERS: INTERVAL Study Group Professor John Danesh Professor David Roberts http://www.intervalstudy.org.uk/about-the-study/whos-involved The INTERVAL study is a randomised controlled trial (RCT) in up to 50,000 whole-blood donors recruited at the 25 donation centres across England. Over a period of two years, participants will be randomised to give blood either at their usual donation intervals or more frequently. Current practice is to invite men and women to give whole blood every 12 and 16 weeks, respectively. During INTERVAL men will be randomised to donate every 12, 10 or 8 weeks and women every 16, 14 or 12 weeks. At the end of the study, we will compare the amount of blood donated and assessments of well-being between the different study groups. INTERVAL is important because although demand for blood transfusions is increasing in England due to the needs of an ageing population, blood supply is critically limited by difficulties in attracting and retaining donors. Blood donation services in different countries have developed varying customs. England has a relatively long interval compared to other European countries where the frequency is as low as every eight weeks for men and ten weeks for women. The study’s main objectives are to embed a RCT within the existing framework of NHSBT that will help to shape national donation policy by determining: 1. the optimum interval between donations, for men and women, that maximizes blood supply without unacceptably increasing iron deficiency/anaemia and its potential complications 2. whether blood donation intervals can be tailored to donors on the basis of demographic, haematological, genetic and lifestyle factors. During the course of the study, additional blood samples will be taken for a full blood count and storage of plasma, serum and DNA. These will be used to measure biomarkers as well as genetic factors. Online questionnaires regarding health, lifestyle and cognitive function will also be collected. A subset of participants will take part in a study of the impact of donation interval on physical activity levels. 10 Research and Development Triennial Report 2009-12 The Universities of Cambridge and Oxford in collaboration with NHSBT have set up INTERVAL. The study has ethical approval from the Cambridge (East) Research Ethics Committee. Recruitment commenced on 11 June 2012 and has involved the staggered roll out of donation centres at a rate of one per week. Recruitment is scheduled to run until March 2013 with completion of the study by April 2015. The trial will not only provide evidence for optimum donation intervals but will also be the foundation for a future programme of research in blood donation. Contribution to patient and donor care or service development The INTERVAL study is aligned with the NHSBT’s long-term aims to: 1. ensure the supply of blood by allowing a direct assessment of the effect of incremental increases in donation frequency on blood collection yields 2. improve the health and well-being of donors. Data from this study will inform tailoring of donation intervals to reduce deferral rates and retain donors 3. provide a more personalised approach to donation and reduce deferral rates due to iron deficiency and anaemia, and 4. evolve into a leading evidence-based health organisation. Group webpage http://www.intervalstudy.org.uk Theme Donor health and behaviour 1 Cambridge BioResource and National Institute for Health Research (NIHR) BioResource for Rare Diseases Dr Nicola Froad Dr Sarah Morley Dr Jennifer Sambrook Dr Nicola Foad, Dr Sarah Morley and Dr Jennifer Sambrook [email protected], [email protected] and [email protected] CONTRIBUTING TEAM MEMBERS: Dalila Belkhiri, Sophia Coe, Abigail Crisp-Hihn, Jennifer Jolley, Heather Lloyd-Jones, Carmel Moore, Marie Mulligan and Jonathan Stephens Cambridge University Scientists in NHSBT have collaborated with Prof John Todd (Fellow of the Royal Society) and Dr John Bradley of the Cambridge BioResource and with Prof John Danesh to create the Cambridge Biomedical Research Centre (BRC) to establish the Cambridge BioResource and Cambridge CardioResource. About 12,000 volunteers, the majority being blood donors, have donated DNA, plasma and serum and completed a lifestyle and health questionnaire during Stage 1 enrolment in the Cambridge BioResource. This allows the selection and recruitment of volunteers with a particular genotype/phenotype to Stage 2 research studies. Researchers of the BRC and NHSBT have recalled thousands of volunteers for Stage 2 studies resulting in 21 original publications about the association between genes and diseases. This success has prompted the formation of the NIHR BioResource across the BRCs of London, Oxford and Cambridge and the Leicester Cardiovascular Biomedical Research Unit (BRU). In addition to healthy volunteers, patients with common and rare diseases are being enrolled in the NIHR BioResource. There are about 7,000 inherited rare diseases, which combined affect 7% of the UK population and the causative genes of about half have been identified. Exome sequencing and other genomics technologies are used to identify the genes underlying the remaining diseases. Prof Ouwehand’s group leads two studies on rare diseases, one on the formation of alloantibodies against Rh groups during pregnancy and another on patients with unexplained bleeding and platelet disorders. The purpose of the first study, which is supervised by Dr Sarah Morley, is to identify common sequence variants conferring risk of Rh alloimmunisation by a Genome-Wide Association Scan (GWAS). This is a joint effort with Prof Ellen van der Schoot of the Sanquin Research laboratories in Amsterdam, the Netherlands. Enrolment of the first 2,000 Rh immunised cases will be completed by the end of 2012 and the GWAS will be performed in 2013. RECENT PUBLICATIONS Dendrou CA, Plagnol V, Fung E, et al. (2009). Cell-specific protein phenotypes for the autoimmune locus IL2RA using a genotypeselectable human bioresource. Nat Genet, 41, 1011-1015 Heinig M, Petretto E, Wallace C, et al. (2010). A trans-acting locus regulates an anti-viral expression network and type 1 diabetes risk. Nature, 467, 460-464 Schimpl M, Moore C, Lederer C, et al. (2011). Association between walking speed and age in healthy, free-living individuals using mobile accelerometry – a cross sectional study. Plos One, 6(8), e23299e23299 BioResource webpages www.cambridgebioresource.org.uk www.bridgestudy.org.uk www.thrombogenomics.org.uk The second study is based on collaborations with comprehensive care centres for patients with inherited bleeding and platelet disorders at the Cambridge and London BRCs (Dr Keith Gomez, Royal Free Hospital, Prof Laffan/Dr Millar, Hammersmith Hospital, Prof John Pasi, Barts Health NHS Hospital) and Dr Andrew Mumford from the Bristol BRU for Cardiovascular Diseases. Overseas centres in Belgium, France, Germany, the Netherlands and the USA have joined the BRIDGE (Biomedical Research centre/ unit Inherited Diseases Genetic Evaluation Study). The coding fraction or exome of 1,000 patients will be collected and the coding fraction or exome will be sequenced to identify the rare variants causative of the patients’ unexplained bleeding and/or platelet disorders. Contribution to patient and donor care or service development The identification of genes controlling the formation of Rh alloantibodies would be a first breakthrough step in understanding why a relatively small number of women form Rh antibodies. The BRIDGE gene discovery project is linked with the ThromboGenomics (www.thrombogenomics.org.uk) initiative which has as its immediate aim to develop an affordable next generation based test for the diagnosis of rare inherited bleeding and platelet disorders other than Haemophilia and von Willebrand Factor Disease. Research and Development Triennial Report 2009-12 11 Theme 1 2 Transfusion/transplantation virology and microbiology Transfusion microbiology with respect to the microbiological safety of blood, tissues and organs Professor Richard Tedder [email protected] CONTRIBUTING TEAM MEMBERS: Kate Tettmar, Samreen Ijaz, Philip Tuke, Poorvi Patel, Gillian Rosenberg, Steve Dicks, Jeremy Garson, Ruth Parry, John Poh and Renata Szypulska The projects undertaken by Professor Tedder’s group encompass elements of work associated with the response to current and emerging microbiological threats to the safety of blood, tissues and organs. This work is therefore responsive and always evolving. Professor Tedder’s group sits within the joint NHS Blood and Transplant (NHSBT) and Health Protection Agency (HPA) Blood Borne Virus Unit based at Microbiology Services Colindale at the HPA. This joint unit provides a unique opportunity for the sharing of expertise, data and cross training of staff. The unit works closely with experts in both organisations who feed in to on-going projects and collaborations. The work undertaken by the group falls principally but not exclusively within blood borne infections and can be divided into surveillance studies, development and research. Current joint NHSBT/HPA and NHSBT projects include: 1. establishing the phylogeny and molecular characterisation of hepatitis viruses in acute and chronically infected donors (B, C and E) 2. seroprevalence and molecular based studies undertaken in blood donor samples and plasma minipools to assess the risk of acute indigenous hepatitis E infections in donors to blood safety 3. development of ex vivo and in vitro methods for determining the biological function of normal and mutated hepatitis B surface antigen (HBsAg) 4. a study of inducible murine retroviruses, and 5. development of an extraction method and real-time TaqMan polymerase chain reaction assay for the detection of bacterial contamination in platelets. An essential arm of this programme of work is the development and implementation of methods for the detection of antibody and nucleic acid linked to current and emerging pathogens which may impact on blood safety. A large focus currently is the investigation of risk and outcome of transmission of hepatitis E virus (HEV) from infected donors. This focus will examine the extent of HEV related post-transfusion hepatitis. The outcome of receiving HEV containing components will be investigated by following up the recipients. This study will generate data from which a risk assessment and interventions can be implemented to limit HEV related disease by blood transfusion. RECENT PUBLICATIONS Ijaz S, Szypulska R, Tettmar KI, Kitchen A, Tedder RS, (2012). ‘Detection of hepatitis E virus RNA in plasma mini-pools from blood donors in England.’ Vox Sanguinis, 102:3, 272 Patel P, Garson JA, Tettmar KI, Ancliff S, McDonald C, Pitt T, Coelho J, Tedder RS, (2011). ‘Development of an ethidium monoazide-enhanced internally controlled universal 16S rDNA real-time polymerase chain reaction assay for detection of bacterial contamination in platelet concentrates.’ Transfusion, (Epub) ahead of print Robinson MJ, Tuke PW, Erlwein O, Tettmar KI, Kaye S, Naresh KN, Patel A, Walker MM, Kimura T, Gopalakrishnan G, Tedder RS, McClure MO, (2011). No Evidence of XMRV or MuLV Sequences in Prostate Cancer, Diffuse Large B-Cell Beale MA, Tettmar K, Szypulska R, Tedder RS, Ijaz S, (2011). ‘Is there evidence of recent hepatitis E virus infection in English and North Welsh blood donors?’ Vox Sanguinis, 100:3, 340-2 Large B-Cell Lymphoma, or the UK Blood Donor Population. Adv. Virol.2011;782353 Contribution to patient and donor care or service development The development of a rapid and highly sensitive molecular assay to detect bacterial contamination in platelet concentrates. Methods have been developed to study the genetic variation in the hepatitis B surface antigen, which can be used to examine the clinical and functional impact of these variations including the impact on the accuracy of donor screening assays. A better understanding has been gained of infected blood donors through the molecular characterisation of viruses circulating in the donor population. The data from this work informs on viral diversity as well as examining the strength of the Donor Health Check (DHC). Measuring the incidence of hepatitis E in blood donors and the extent of HEV related post-transfusion hepatitis in recipients. Data from this study will contribute to appropriate risk assessments and interventions that can be implemented to limit HEV related disease in the UK. 12 Research and Development Triennial Report 2009-12 Transfusion/transplantation virology and microbiology Theme 1 2 Virological blood safety Professor Jean-Pierre Allain [email protected] CONTRIBUTING TEAM MEMBERS: Daniel Candotti, Birgit Meldal, Penelope Garmiri, Laura Cox, Graham Freimanis, Subhajit Biswas, Dalila Belkhiri, Mira El Chaar, Francesca Gobbini, Florence Enjalbert and Rowena Ching Transmission of viral infections by transfusion has been at the forefront for 25 years following the HIV-AIDS crisis. As a result, improved assays and genomic detection has been implemented to cover HIV and hepatitis C virus infections. Hepatitis B infection has been relatively neglected until a form of HBV infection missed by standard serological methods and detected only by genomic, extremely sensitive methods was identified (occult HBV infection or OBI). This laboratory has become a world leader in this challenging viral threat. We have collected OBI samples from all areas of the world through a large network of blood centres. Specific methods have been developed to characterise OBIs despite very low levels in donor circulation. These methods were applied to over 200 OBI cases as confirmation and material for basic research. Results provided a frequency of the condition ranging between 1:500 and 1:400,000 blood donations depending on areas of the world. It also demonstrated a 28% rate of infectivity in blood recipients justifying efforts to continue and expand genomic testing. The mechanisms leading to OBI were also examined and turned out to be many and quite diverse such as a relative inefficiency of the immune system to control the infection, the selection of mutations escaping detection by current serological tests, abnormal biology of the virus main protein which is either not produced or not excreted by the liver cells constituting the target of the virus, or mutations impairing the machinery of the virus replication. At the same time, we also studied the classical form of hepatitis B virus for comparison to OBI in terms of both classification into genotypes and frequency of mutations that were considerably less than in OBIs. Such studies were conducted in Ireland, Switzerland, Poland, Italy, Spain, Iran, Turkey, Malaysia, Thailand, Ghana, Guinea, Tunisia and South Africa. These studies significantly contributed to demonstrate the residual threat of hepatitis B virus to blood safety, to devise the methods to identify OBIs and to justify the implementation of HBV genomic screening in the UK. Contribution to patient or donor care or service development The first objective was to provide epidemiological evidence that nucleic acid testing for HBV was justified. RECENT PUBLICATIONS Allain JP, Belkhiri D, Vermeulen M, Crookes R, Cable R, Amiri A, Reddy R, Bird A, Candotti D. Characterization of occult Hepatitis B virus strains in South African blood donors. Hepatology 2009; 90: 1868-76 El Chaar M, Candotti D, Crowthers RA, Allain JP. Impact of Hepatitis B virus surface protein mutations on the diagnosis of occult Hepatitis B virus infection. Hepatology 2010; 52:1600-10 Stramer S, Wend U, Candotti D, Forster G, Hollinger B, Dodd R, Allain JP, Gerlich W. Occurrence and characterization of naturally acquired hepatitis B infection among vaccinated blood donors. N Engl J Med 2011: 364:236-47 Candotti D, Lin CK, Belkhiri D, Sakuldamrongpanich T, Biswas S, Lin S, Teo D, Ayob Y, Allain JP. Occult hepatitis B infection in blood donors from South East Asia: molecular characterisation and potential mechanisms of occurrence. Gut. 2012 Jan 20 Group webpage http://www.haem.cam.ac.uk/ transmed Our second objective was to provide the means to confirm the results of blood screening and determine the criteria to classify the type of HBV infection so that appropriate donor information can be given. Thirdly, discoveries made at the basic science level while characterising OBIs further advanced knowledge of HBV and impacted basic clinical issues such as quantification of HBV viral load in patients and qualification of the international standards. Main pathways of HBV replication and particle formation in hepatocytes. cccDNA serves as template for transcription of both pgRNA and SmRNA. Defects in transcription, reverse transcription, translation or export of HBV genome or proteins can result in reduced genome or structural proteins and be the cause of OBI. Splicing mechanisms lead to the translation of recombinant or neo‑protein susceptible to interfere with any of these mechanisms. Research and Development Triennial Report 2009-12 13 Theme 1 2 Transfusion/transplantation virology and microbiology Reactivation of common viruses in patients receiving chemotherapy or immunosuppressive drugs Dr Daniel Candotti [email protected] CONTRIBUTING TEAM MEMBERS: Jean-Pierre Allain, Penelope Garmiri, Birgit Meldal, Francesca Gobbini and Rowena Ching In England, approximately 50% of blood components are transfused to patients receiving chemotherapy for cancer or immunosuppressive drugs for bone marrow or organ transplantation. When such patients develop a viral infection, transfusion tends to be blamed although reactivation of a patient’s previous infections is common and both potential origins need to be distinguished. This project intended to determine the frequency of patient reactivation of eight common viruses (Parvovirus B 19, Cytomegalovirus, Epstein-Barr virus, Herpesvirus-8, varicella-zoster virus, Hepatitis B virus, Hepatitis E virus and Hepatitis A virus) when receiving drugs such as corticosteroids, methotrexate, fludarabine, ciclosporin, rituximab, tacrolimus or sirolimus. The collaborative study included patients from Cambridge Dept of Haematology and Medicine, Warsaw Institute of Haematology and Transfusion Medicine (Poland) and the Dept. of Haematology and Transfusion in Lecco, Italy. Prior recovered infections were identified by the presence of virus-specific antibodies and reactivation was defined as the confirmed presence of viral genome in initially negative patients. Most patients received preventive anti-viral treatment such as gancyclovir for herpesviruses and lamivudine for HBV. A total of 157 patients were studied (29 BMT, 65 liver transplantation and 63 cancer). 75-90% of patients had been exposed to four viruses (CMV, EBV, B19V, VZV), 20-40% for HAV and HEV and less than 5% for HHV-8 and HBV. Despite anti-viral prophylaxis, 15.3% and 7.6% of exposed patients were found DNA positive for EBV and CMV, respectively after receiving immunosuppressive drugs for variable periods of time. None of the other viruses showed clear evidence of reactivation. Evidence of nosocomial or community infections was found as well as effect of IV IgG received by liver transplant patients. Except for EBV, reactivation is relatively rare in patients receiving cancer chemotherapy or immunosuppressive drugs. Collecting a pre-transfusion sample in these patients would be critical to distinguish transfusion-related transmission from reactivation. This can only be done with certainty by obtaining identical informative sequences between blood donor and patient post-transfusion. Contribution to patient and donor care or service development Transfusion-transmission of viruses is a source of legal proceedings for NHSBT. This project led to the development of qualitative and quantitative genomic assays for eight viruses susceptible to both reactivation and transfusion-transmission. These methods can be applied to organ, bone marrow or cord blood screening and to the investigation of alleged transfusion-transmission of viruses in patients receiving immunosuppressive drugs. 14 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Compston LI, Li C, Sarkodie F, Owusu-Ofori S, Opare-Sem O, Allain JP. Prevalence of persistent and latent viruses in untreated patients infected with HIV-1 from Ghana, West Africa. J Med Virol 2009; 81: 1860-8 Power JP, El Chaar M, Temple J, Thomas M, Spillane D, Candotti D, Allain JP. HBV reactivation after fludarabine chemotherapy identified on investigation of suspected transfusion-transmitted Hepatitis B virus. J Hepatol 2010; 53: 780-7 Gobbini F, Owusu-Ofori S, Marcelin AG, Candotti D, Allain JP. Human herpesvirus 8 transfusion transmission in Ghana, an endemic region of West Africa. Transfusion 2012 Mar 15 Meldal BMH, Sarkodie F, OwusuOfori S, Allain JP. Hepatitis E virus infection in Ghanaian blood donors – the importance of immunoassay selection and confirmation. Vox Sanguinis 2012, in press Group webpage http://www.haem.cam.ac.uk/ transmed Transfusion/transplantation virology and microbiology Theme 1 2 Blood donors, viral infections and malaria in Ghana Professor Jean-Pierre Allain [email protected] CONTRIBUTING TEAM MEMBERS: Lara Compston, Mira ElChaar, Graham Freimanis and Francesca Gobbini The Cambridge group has conducted extensive collaboration with the Transfusion Medicine Unit (TMU) of a major teaching hospital in Kumasi, Ghana for the past 12 years. Blood donor recruitment and blood safety were the main themes of research. Viral safety and, in the past two years transfusion malaria, were addressed by identifying the threats and developing strategies to reduce such threats at an affordable cost. Following the implementation of pre-donation serological screening for HIV, HCV and HBV, nucleic acid testing in pools of ten donor plasma samples at an extra cost of $4/unit was implemented. A comparison of viral infections in first-time volunteer non-remunerated and family donors concluded the absence of difference between the two types of donors, justifying the use of both to meet the blood demand. Partnership between TMU and local radio stations provided 25% of the blood supply and 65% repeat donors compared to 20% in secondary schools. Transfusion-transmitted malaria is a neglected topic although assumed to be frequent and clinically serious in young children and pregnant women. No screening is in place in most of Sub-Saharan Africa. A preliminary study was conducted to determine the frequency of antibodies to plasmodium and of parasitaemia in donor blood and recipients as well as assessing the threat of transfusion-transmission with molecular methods. 100% of adult donors and patients carried antibodies to plasmodium. 55% of both donors and recipients were parasitaemic when tested with a sensitive PCR and all four main plasmodium species were circulating although plasmodium falciparum (Pf) was present in 90% of infections and multispecies infections were more than 10% of total. 18-25% of non-parasitaemic recipients of parasitaemic blood were infected by transfusion. The failure of blood screening due to insufficient sensitivity of inexpensive tests and the increased apparent prevalence when PCR-based tests are used impacted severely on the blood supply. This initiated us to examine pathogen inactivation as a suitable strategy to address transfusion malaria. The Mirasol technology applied to whole blood units spiked with Pf monitored with a novel amplification inhibition assay and blood culture was found efficacious with both approaches. It represents a promising alternative to malaria testing, blood filtration, further viral and bacterial testing. RECENT PUBLICATIONS Owusu-Ofori S, Asenso-Mensah K, Boateng P, Sarkodie F, Allain JP. Fostering repeat donations in Ghana. Biologicals 2010; 38: 47-52 Allain JP. Moving on from voluntary non-remunerated donors: who is the best donor? Brit J Haematol 2011; 154, 667–785 Freimanis G, Sedegah M, Owusu-Ofori S, Kumar S, Allain JP. Investigating the Prevalence of Transfusion-transmission of Plasmodium within a hyperendemic blood donation system. Transfusion accepted for publication Ala F, Allain JP, Bates I, Boukef K, Boulton F, Brandful J, Dax EM, ElEkiaby M, Farrugia A, Gorlin J, Hassall O, Lee HH, Loua A, Maitland K, Mbanya D, Mukhtar Z, Murphy W, Opare-Sem O, Owusu-Ofori S, Reesink H, Roberts D, Torres O, Totoe G, Ullum H, Wendel S. External financial aid to blood transfusion services in sub-Saharan Africa – A need for reflection. PLOs Medicine, in press Group webpage http://www.haem.cam.ac.uk/ transmed Contribution to patient and donor care or service development This project does not bring direct contribution to NHSBT although through the Blood and Organ Transmissible Infectious Agents (BOTIA) donor-recipient repository a critical tool to study emerging infections possibly extending to the UK is of major interest to the blood service. The amplification inhibition assay developed for Pf can be applied to any other pathogen targeted by a pathogen inactivation technique. Log inhibition of P falciparum genome amplification following treatment with the Mirasol system. A. Impact of Riboflavin and UV treatment on plasmodium genomic amplification inhibition at two different exposure levels: 80 and 160J/ml RBC. B. Impact of UV exposure on plasmodium genomic DNA at increasing level of UV exposure: 40, 80, 120 and 160J/ml RBC. Research and Development Triennial Report 2009-12 15 Theme 1 2 Transfusion/transplantation virology and microbiology A screening test for anti-malarial antibodies Professor David Roberts [email protected] CONTRIBUTING TEAM MEMBERS: David J Smith, Rozieyati Mohammed-Saleh, Adam Richie and John Burthem (Univ Manchester) Although rare, transfusion-transmitted malaria is frequently lethal if not treated immediately. Almost all such cases of malaria originate from malaria-infected donors returning from malaria-endemic regions. There is a clear need for NHSBT and other blood services to identify and exclude asymptomatic malaria infected donors while minimising the exclusion of uninfected donors. We are aiming to develop a test that reliably detects infection with all four species of human malaria. All donors travelling to tropical areas where malaria is present cannot donate immediately on their return but can restart giving blood after a six-month deferral period and after a negative specific malaria antibody test. At present, several different malaria antibody diagnostic tests are commercially available but they all have their limitations. Many of these tests detect malarial antibodies against plasmodial proteins that are potential malaria vaccine candidates and others have inadequate sensitivity to detect infection with other human species of malaria, such as P. ovale and P. malariae. As such there is scope to develop an alternative test to replace the current tests should they become obsolete if the vaccine candidates become widely used, to improve the sensitivity and specificity of testing and for confirmation of positive results. At the moment the United States Food and Drug Administration (FDA) has not approved current tests for clinical use but has repeatedly said that only tests with antigens from all four major species of human malaria would be acceptable for FDA approval. We have used an unbiased screening proteomic approach to identify target P. falciparum proteins that are recognised by cohorts of malaria immune sera but that do not react with non-immune sera. The identified blood stage target antigens have been cloned and expressed as recombinant proteins in a suitable bacterial system. To date, 15 target proteins have been expressed with 14 of them successfully purified. An ELISA test using the proteins to capture and detect specific malarial antibodies from human serum has been developed and used to assess the ability of the purified proteins to distinguish non-infected and malaria infected serum samples. Proteins have been tested singly or in combination to determine those with the most effective diagnostic value. The best three antigens give similar if not better results to those in commercial tests and this strategy can now be used to pick out similar antigens from other malaria species that can be incorporated into a test to detect blood donors carrying malaria. Figure 1. Target antigens for a malaria test can be identified by immune-precipitation and isolation of individual proteins on a 2-D gel. Individual proteins are digested with trypsin and identified after mass-spectrometry by a database search for the charge/mass ratio (using MALDI/TOF) and sequencing of individual fragments (using tandem MS). Contribution to patient and donor care or service development Screening for active malaria infections in donors who have returned from malaria-endemic countries is vital for maintaining the donor pool and eliminating the risk of transfusion-transmitted malaria infections in blood recipients. The current testing strategy is an effective means of ensuring the safety of the blood supply, however, it does have some limitations. We have a new strategy to define malarial antigens from different malaria parasites for a test that will reliably detect infection with all four species of human malaria for use worldwide. Group webpage http://www.ndcls.ox.ac.uk/ResGroups.php?GID=3 16 Research and Development Triennial Report 2009-12 Transfusion/transplantation virology and microbiology Theme 1 2 Non-coding RNAs in cytomegalovirus infection Dr Lars Dölken [email protected] CONTRIBUTING TEAM MEMBERS: Anne L’Hernault, Andrzej Rutkowski and Miranda de Graaf Humans are infected with eight different herpesviruses responsible for a broad range of disease ranging from the common cold sore to cancer. All of us are infected with at least three of these viruses. Upon primary infection, they all establish a life-long, latent infection posing the constant risk of reactivation and disease. Herpesviruses inflict a substantial burden of disease and economic costs in transplantation and transfusion medicine, in immunocompromised patients as well as in pregnancy. Recently, herpesviruses were found to express small non-protein-coding RNA molecules termed microRNAs. Our work aims at characterising the function and suitability of these molecules for targeting by urgently needed novel antiviral agents. MicroRNAs (miRNAs) are small RNA molecules, which regulate protein expression by sequence-specific binding to target RNA molecules. To date, more than 1,000 miRNAs have been identified in humans. Recent pharmacological developments now allow them to be readily targeted using anti-sense molecules, so called ‘AntagomiRs‘. As such, an AntagomiR against cellular miR-122, a cellular miRNA of crucial importance for hepatitis C virus (HCV) replication, has successfully entered clinical trials for HCV treatment. Herpesvirus encoded miRNAs (See Table 1) thus represent interesting candidates for novel antiviral agents. Atlas of viral miRNA targets Our research is focussed on providing a comprehensive understanding of their complex functions. Recently, we published the first atlas of viral miRNA targets for two of the eight human herpesviruses, namely Kaposi’s sarcoma-associated herpesvirus and Epstein-Barr-Virus, the causative agent of glandular fever. On the one hand, these miRNAs aid the evasion of our immune system, promote the development of tumours and prevent cell death. On the other hand, they enhance the ability of these viruses to establish a persistent infection, remain quiescent for years and prevent uncontrolled virus reactivations (see Figure 1). As many viral miRNA targets are involved in innate and adaptive immunity, animal models are required to study their function. Therefore, we established the murine cytomegalovirus (mCMV) miRNA model. We identified two mCMV miRNAs to be important for long-term persistent infection and host-to-host spread – the first phenotype of a viral miRNA knock-out virus in vivo. In addition, we found efficient mCMV replication to be dependent on the elimination of two cellular miRNAs by a novel viral large non-coding RNA. The underlying molecular mechanism remains to be elucidated. In summary, by combining systems biology technologies with animal models this work aids to provide the knowledge required to design novel antiviral strategies to prevent herpesvirus reactivation or target the latent virus reservoir. Contribution to patient and donor care or service development RECENT PUBLICATIONS Degradation of cellular mir-27 by a novel, highly abundant viral transcript is important for efficient virus replication in vivo. Marcinowski L, Tanguy M, Krmpotic A, Rädle B, Lisnić VJ, Tuddenham L, Chane-Woon-Ming B, Ruzsics I, Erhard F, Benkartek C, Babic M, Zimmer R, Trgovcich J, Koszinowski UH, Jonjic S, Pfeffer S, Dölken L. PLoS Pathogens 2012 Feb;8(2):e1002510 Small RNA deep sequencing identifies microRNAs and other small noncoding RNAs from human herpesvirus 6B. Tuddenham L, Jung JS, Chane-Woon-Ming B, Dölken L, Pfeffer S. Journal of Virology 2012 Feb;86(3):1638-49 Cytomegalovirus microRNAs facilitate persistent virus infection in salivary glands. Dölken L, Krmpotic A, Kothe S, Tuddenham L, Tanguy M, Marcinowski L, Ruzsics Z, Elefant N, Altuvia Y, Margalit H, Koszinowski UH, Jonjic S, Pfeffer S. PLoS Pathogens 2010 Oct 14;6(10):e1001150 Dölken L, Malterer G, Erhard F, Kothe S, Friedel CC, Suffert G, Marcinowski L, Motsch N, Barth S, Beitzinger M, Lieber D, Bailer SM, Hoffmann R, Ruzsics Z, Kremmer E, Pfeffer S, Zimmer R, Koszinowski UH, Grässer F, Meister G, Haas J. Systematic analysis of viral and cellular microRNA targets in cells latently infected with human gamma-herpesviruses by RISC immunoprecipitation assay. Cell Host Microbe. 2010 Apr 22;7(4):324-34 Group webpage http://www.med.cam.ac.uk/dolken This work comprises basic research on the functional role of herpesvirus non-coding RNA and their role in virus persistence and reactivation. A better understanding of the molecular mechanisms involved in these fundamental processes pathognomic for all members of the herpesvirus family may enable us to develop novel therapies to reduce the viral load in transplant patients prior to reactivation or prevent the occurrence thereof. This would substantially reduce herpesvirus-related morbidity and graft-failure in transplant patients as well as the related costs for pre-emptive monitoring and treatment. Triennial Research and Development Report 2009-12 17 Theme 1 2 Transfusion/transplantation virology and microbiology Figure 1. Table 1 18 Virus Number of miRNAs Herpes simplexvirus 1 16 Herpes simplexvirus 2 17 Varizellazoster virus 0 Epstein-Barr-Virus 25 Human cytomagalovirus 12 Human herpesvirus 6 3 Human herpesvirus 7 not studied Kapasi’s sarcoma hepesvirus 12 Research and Development Triennial Report 2009-12 Transfusion/transplantation virology and microbiology Theme 1 2 Transfusion medicine epidemiology review: TMER Dr Patricia Hewitt [email protected] CONTRIBUTING TEAM MEMBERS: Charlotte Llewelyn, Jan Mackenzie (NCJDSRU) and Robert Will (NCJDSRU) The Transfusion Medicine Epidemiology Review (TMER) uses the National CJD Surveillance (NCJDSU) Register and UK Blood Service records to see whether: a) patients with Creutzfeldt-Jakob Disease (CJD) may have given blood donations and, if so, whether any patient receiving that blood is also known to have CJD, and b) whether any patient with CJD has ever received a blood transfusion and, if so, whether any of the donors are known to have CJD. As of 31 March 2012, 18/176 variant CJD cases gave blood donations from which blood components were issued to hospitals. Of 67 recipients identified, 18 are currently alive and 49 dead, including four cases of probable transfusion-transmitted infection (three clinical cases and one pre- or sub clinical case) associated with transfusion of non-leucodepleted red cells (1996-1999) originating from three different donors. All live recipients have been informed of their exposure and asked to take precautions to prevent passing on vCJD to other people eg not donate blood, tissues or organs. A retrospective case-note review of deceased recipients of vCJD implicated components found no evidence that any individuals (other than the three clinical vCJD cases) had expressed clinical signs or symptoms suggestive of vCJD during life, but only four recipients had survived more than five years post transfusion. 10/176 vCJD cases had transfusion records, including the three known cases. One was transfused at the onset of symptoms. None of the 112 donors traced who had given blood to the remaining six cases have developed vCJD. A report detailing a possible link to a common donor between one case transfused at birth and another vCJD case was published, but this was probably due to chance. RECENT PUBLICATIONS Gilles M, Chohan G, Llewelyn AC, Mackenzie J, Ward HJT, Hewitt PE, Will RG. A Case-note review of deceased recipients of vCJD implicated blood. Vox Sanguinis 2009; 97:211-218 Ward HJT, Mackenzie JM, Llewelyn CA, Knight RSG, Hewitt PE, Connor N, Molesworth A, Will RG, Variant Creutzfeld-Jakob disease and exposure to fractionated products. Vox Sanguinis 2009; 97:207-210 Chohan G, Llewelyn C, Mackenzie J, Cousens S, Kennedy A, Will W, Hewitt P. Variant Creutzfeld-Jakob disease in a transfusion recipient: coincidence or cause? Transfusion 2010; 50:1003-1006 Group webpage http://www.cjd.ed.ac.uk/TMER/ TMER.htm Twenty-five units of plasma donated before 1998 by donors who later developed vCJD were sent for UK fractionation into 191 plasma product batches and a separate exercise by the Health Protection Agency was undertaken to trace recipients. To date, none have developed vCJD. However, abnormal prion protein was detected at post-mortem in the spleen of one haemophilia patient given Factor VIII, but who died of causes unrelated to vCJD. A case-note review in 2009 showed that 9/168 vCJD cases on the CJD Surveillance Unit (SU) Register had received low risk fractionated plasma products on a total of 12 occasions. It was unlikely that any of these cases were infected through this route, but the possibility that such transmission could occur in future cannot be ruled out. No links have emerged so far to suggest any evidence of sporadic CJD or familial CJD transmission by blood transfusion, but this important work is on-going. Contribution to patient and donor care or service development Although the vCJD epidemic has peaked, evidence suggests there is a population of asymptomatic ‘carriers’ of vCJD who may or may not develop symptoms. In the absence of a validated screening test to identify infectivity in blood, this sub-clinical population poses a major public health concern. The TMER has fed into a series of UK measures to minimise the risk of vCJD transmission by blood transfusion; the latest being a recommendation in 2009 by the Advisory Committee on the Safety of Blood Tissues and Organs (SaBTO) on the introduction of prion-filtered blood cells for some or all groups of patients. A final decision from the Department of Health is awaited. Research and Development Triennial Report 2009-12 19 Theme 1 2 Transfusion/transplantation virology and microbiology Screening assays for Prion disease Professor David Anstee [email protected] CONTRIBUTING TEAM MEMBERS: Gary Mallinson, Nigel Appleford and Maria Kaisar The human prion disease variant Creutzfeldt-Jakob disease (vCJD) is an incurable, fatal disease of the brain. It can be transmitted to blood, organ and tissue recipients from donors who show no signs or symptoms of the disease and, because the incubation period for vCJD is very long, donors may not do so for many months or years. One donor could potentially spread the disease to many individuals and pose a risk to public health and the public trust in blood and organ donation. The development of blood screening tests would be an important step in protecting recipients of blood, blood products, organs and tissues from vCJD. A number of good, reliable tests have been developed to detect the agent thought to cause the disease (known as a prion). We have developed a test to screen NHSBT and Scottish National Blood Transfusion Service (SNBTS) tissue donors for vCJD and are currently conducting a two year study evaluation trial. We have recently extended the testing to screen for CJD in cornea donors. For these tests we are using tissue samples where vCJD prion is likely to be present at a relatively high level before the disease symptoms occur. In the blood of persons who are incubating vCJD and even in persons with clinical vCJD, prions are present at very low levels and well below the limits of detection of conventional assays. Recently, it has been possible to detect prions in the blood of experimentally prion innoculated animals by a technique that amplifies the prion in blood. The technique, known as Quaking-Induced Conversion of prion (QuIC) can detect prion from vCJD brain samples at 1014 dilution in blood. We are developing QuIC to a form suitable for use as a blood screening test and to facilitate this we are collaborating with the Roslin Institute, University of Edinburgh to use a sheep model as close as possible to vCJD in humans. Using this model we can determine how early in the incubation period we can detect prions in blood and help assess the effectiveness of prion reduction measures such as leucodepletion and prion filtration of blood. Contribution to patient and donor care or service development The CJD screening assay for NHSBT & SNBTS tissue donors and cornea donors has reduced the risk of transmission of CJD to transplant recipients of tissues such as skin, bone, heart valves and cornea. The development of the QuIC assay will help the UK blood services assess the risk of vCJD transmission in humans through blood transfusion and other organ and tissue donations. RECENT PUBLICATIONS McGuire LI, Peden AH, Orrú CD, Wilham JM, Appleford NE, Mallinson G, Andrews M, Head MW, Caughey B, Will RG, Knight RS, Green AJ. RT‑QuIC analysis of cerebrospinal fluid in sporadic Creutzfeldt‑Jakob disease Annal Neurol. 2012. doi:10.1002/ana.23589 Peden AH, McGuire LI, Appleford NE, Mallinson G, Wilham JM, Orrú CD, Caughey B, Ironside JW, Knight RS, Will RG, Green AJ, Head MW. Sensitive and specific detection of sporadic Creutzfeldt-Jakob disease brain prion protein using real-time quaking-induced conversion. J Gen Virol. 2012 Feb;93(2):438-49. Epub 2011 Oct 26 Warwick RM, Armitage WJ, Chandrasekar A, Mallinson G, Poniatowski S, Clarkson A. A pilot to examine the logistical and feasibility issues in testing deceased tissue donors for vCJD using tonsil as the analyte. Cell Tissue Bank. 2012 Mar;13(1):53-61. Epub 2010 Nov 3 Clewley JP, Kelly CM, Andrews N, Vogliqi K, Mallinson G, Kaisar M, Hilton DA, Ironside JW, Edwards P, McCardle LM, Ritchie DL, Dabaghian R, Ambrose HE, Gill ON. Prevalence of disease related prion protein in anonymous tonsil specimens in Britain: cross sectional opportunistic survey. BMJ. 2009 May 21;338:b1442. doi: 10.1136/ bmj.b1442 Group webpage http://ibgrl.blood.co.uk Quaking-Induced Conversion (QuIC) analysis of vCJD brain and spleen homogenates diluted into human plasma. 20 Research and Development Triennial Report 2009-12 Theme Appropriate and safe use of blood components 1 3 Transfusion alternatives before surgery in Sickle Cell Disease (TAPS) Dr Lorna Williamson [email protected] CONTRIBUTING TEAM MEMBERS: Jo Howard, Tony Johnson (Medical Research Council), Charlotte Llewelyn, Moira Malfroy, Louise Choo (CSU team) and Sally Davies Patients with sickle cell disease (SCD) can develop complications such as acute painful crisis or acute chest syndrome (ACS) after planned surgery. A UK survey we carried out in 2005 showed that there was no consensus as to whether SCD patients should be transfused before undergoing low or medium risk surgery. Between 2007-11, we carried out a multi-centre randomised controlled trial (TAPS) in UK, Canada and the Netherlands, which recruited adults and children aged over one year scheduled to have low or medium risk surgery. They were randomised to receive no pre-operative transfusion (Arm A) or to receive either a top-up or exchange transfusion, depending on the haemoglobin level (Arm B). We compared the proportion of patients who in each arm who developed clinically significant postoperative complications, and an independent safety committee monitored serious adverse events (SAEs). RECENT PUBLICATIONS Howard J, Malfroy M, Llewelyn C, Choo L, Rees D, Walker I, Tilyer L, Fijnvandraat, K, Kirby-Allen M, Hodge R, Purohit S, Davies SC, Williamson LM. Pre-Operative Transfusion Reduces Serious Adverse Events in Patients with Sickle Cell Disease (SCD): Results from the Transfusion Alternatives Pre-operatively in Sickle Cell Disease (TAPS) Randomised Multi-Centre Clinical Trial. Blood (2011), Vol 118; Issue 21, Abstract 9 In March 2011 the Trial Steering Committee took the decision to close the trial early after an excess of patients experiencing SAEs was reported in Arm A (n=10) compared to Arm B (n=1). All but one of these 11 patients had ACS, and, although all patients recovered, the risks of this serious complication were considered unacceptable. Results were then analysed from 67/70 patients recruited. Thirteen of 33 of patients (39%) in Arm A developed post-operative complications compared to only 15% (5/34) of patients in Arm B, which was significantly different (P=0.023). Twelve of the patients who were not transfused pre-op subsequently needed to have a transfusion during or after surgery, as a result of a complication (mostly ACS), compared to only three patients in Arm B. Only one patient (in Arm B) had developed a new alloantibody (Anti-S) following transfusion. No differences in length of hospital stay or re-admission rates were seen between the two groups. It was concluded that pre-operative transfusions should be offered to sickle cell patients (Hb SS) before low or medium risk surgery. The results were presented at the American Society for Haematology in December 2011, when it was selected for both the press briefing and ‘ASH on tour’, a post-conference video presentation. A manuscript has been submitted for publication, and a health economic analysis will follow. Contribution to patient and donor care or service development The trial is being taken into account in the formulation of the new British Committee for Standards in Haematology guidelines for transfusion in haemoglobinopathy patients. Research and Development Triennial Report 2009-12 21 Theme 1 3 Appropriate and safe use of blood components Studies into the clinical effectiveness of platelet transfusions and the optimal product Dr Simon J Stanworth [email protected] CONTRIBUTING TEAM MEMBERS: Clinical Studies Unit team. Systematic Reviews Initiative team RESEARCHERS: Lise Estcourt, Anne Kelly, Rebecca Cardigan, Sheila MacLennan, Cristina Navarrete, Judith Marsh, Ana Curley and Mike Murphy One of NHSBT’s clinical research programmes focuses on the use of platelet transfusions. This was given high priority by NHSBT’s appropriate and safe use of blood strategy group because of the rapid increase in hospital platelet usage and the high level of inappropriate use identified in our recent national audit. We have updated the Cochrane systematic review of platelet usage, to incorporate new data from platelet dose studies. The Clinical Studies Unit (CSU) has supported a large randomised controlled trial (TOPPS) in adult patients with blood cancers to compare prophylactic platelet transfusion using a platelet threshold of 10x109/L with a ‘no-prophylaxis’ arm, in which patients receive platelets only if bleeding or for clinical reasons. The primary outcome measure is the proportion of patients having a significant clinical bleed up to 30 days from randomisation. Analysis has started and results will be presented at international meetings over the coming year. The value of prophylactic platelets is equally uncertain in neonates, who are another intensively transfused group of patients. We have started a randomised clinical trial (PLANET-2) comparing two different platelet counts as triggers for platelet transfusion. The primary outcome is a composite of mortality and major bleeding at 28 days after randomisation. Importantly, we have shown that consenting and randomising babies to trials of blood transfusion is feasible. Best products for transfusion The CSU is also undertaking studies to address the best product for transfusion. A trial of extended shelf-life platelets (PPIP) has been completed in 2012 and will provide data to compare increases in platelet count in patients who have received either 2-5 or 6-7 day old platelets. The PROMPT study examines whether the characteristics of apheresis platelets affect outcomes in 100 patients with blood cancers. It is looking at whether platelets that are characterised as being of ‘high’ reactivity are different to platelets characterised as being of ‘low’ reactivity in their effect on platelet count increment. This trial is open to recruitment. Finally, The HLA epitope study is designed to compare the effect of HLA epitopematched (HEM) with standard HLA-matched (HSM) platelet transfusions in raising the platelet count (CI) in patients with types of blood cancers. It will tell us about different ways of providing platelets for patients who unfortunately have antibodies to proteins on platelets, which makes transfusion more difficult. This study is due to commence in September 2012. RECENT PUBLICATIONS Estcourt L, Stanworth S, Doree C, Hopewell S, Murphy MF, Tinmouth A, Heddle N. Prophylactic platelet transfusion for prevention of bleeding in patients with haematological disorders after chemotherapy and stem cell transplantation. Cochrane Database Syst Rev. 2012 May 16;5:CD004269 Estcourt LJ, Stanworth SJ, Murphy MF. Platelet transfusions for patients with haematological malignancies: who needs them? Br J Haematol 2011 Aug;154 (4): 425-40 Stanworth SJ, Dyer C, Choo L, Bakrania L, Copplestone A, Llewelyn C, Norfolk D, Powter G, Littlewood T, Wood EM, Murphy MF; TOPPS Study Group. Do all patients with hematologic malignancies and severe thrombocytopenia need prophylactic platelet transfusions? Background, rationale, and design of a clinical trial (trial of platelet prophylaxis) to assess the effectiveness of prophylactic platelet transfusions. Transfus Med Rev. 2010 Jul;24(3): 163-71 Stanworth SJ, Clarke P, Watts T, Ballard S, Choo L, Morris T, Murphy MF, Roberts I; for the Platelets and Neonatal Transfusion Study Group. Prospective, Observational Study of Outcomes in Neonates With Severe Thrombocytopenia. Pediatrics 2009 124(5);e826-e834 Contribution to patient and donor care or service development Clinical studies of the use of prophylactic platelet transfusions by comparison to no transfusions will provide fundamental insight into the overall value of platelet transfusions to prevent bleeding in patients with types of blood cancer. The results may help tell us which patients do not need to receive platelet transfusions when they are showing no signs of bleeding. There are very few platelet transfusion studies in infants, and the study of platelet transfusions in neonates will provide evidence for safe practice in a very vulnerable group of patients. We need to know whether platelets stored for a longer period of time are safe for patients, as this is important for managing our stocks of platelets for hospitals. 22 Research and Development Triennial Report 2009-12 Theme Appropriate and safe use of blood components 1 3 Use of information technology to deliver safer and more effective transfusion practice Professor Mike Murphy [email protected] CONTRIBUTING TEAM MEMBERS: Julie Staves, Edward Fraser, Simon Noel, Barbara Cripps, Jonathan Kay and Paul Altmann There remains considerable potential to further improve hospital transfusion practice so there are fewer ‘wrong blood’ errors, less inappropriate use of blood and improved efficiency of the hospital transfusion process including rapid provision of blood for patients that need it urgently, reduced staff time, less blood wastage and simpler compliance with national regulations for clinical and laboratory transfusion practice. Research and development activities An electronic blood transfusion management system was developed in 2001 at the Oxford University Hospitals (OUH) supported by NHSBT and fully implemented throughout the OUH in 2006. It facilitates safer practice, saves time and reduces costs. It was one of the first six recommended interventions for NHS Trusts as part of the NHS Quality, Innovation Productivity and Prevention (QIPP) programme, and has won many national awards, including the Health Service Journal Award for Improving Care with Technology and UK IT Industry Awards for Public Sector Project of the Year in 2009. We have recently demonstrated the benefit of the system for active monitoring of transfusion practice and driving better practice. There is considerable potential for other centres to take advantage of the technology we have developed for transfusion and the process for ‘electronically controlled remote blood issue’, which enables us to provide a ‘centralised transfusion service’ (CTS) for Oxfordshire. The Oxford CTS provides a model for CTS elsewhere in the UK, and indeed worldwide. Further developments being explored include: 1. a ‘decision support’ module to provide guidance to clinicians ordering blood to promote adherence to guidelines for the appropriate use of blood and further reduce costs 2. a ‘data mining’ tool to provide clinical teams with regular comparative data on their blood usage 3. the inclusion of information of intra-operative cell salvage and near-patient haemostasis testing to increase the effectiveness of blood conservation activities, and RECENT PUBLICATIONS Murphy MF, Fraser E, Miles D, Noel S, Staves J, Cripps B, Kay J, (2012). How do we monitor hospital transfusion practice using an end-to-end electronic transfusion management system? Transfusion Jan 9. doi: 10.1111/j.1537-2995.2011.03509.x. (Epub ahead of print) Murphy MF, Staves J, Davies A, Fraser E, Parker R, Cripps B, Kay J & Vincent C, (2009). How do we approach a major change program using the example of the development, evaluation, and implementation of an electronic transfusion management system. Transfusion. 49, p829-837 Staves J, Davies A, Kay J, Pearson, O, Johnson T & Murphy MF, (2008). Electronic remote blood issue: a combination of remote blood issue with a system for end-to-end electronic control of transfusion to provide a “total solution” for a safe and timely hospital blood transfusion service. Transfusion. 48, p415-424 Murphy MF, Stanworth SJ, & Yazer M, (2011). Transfusion practice and safety: current status and possibilities for improvement. Vox Sang. 100, p46-59 4. linkage with other clinical IT developments in Oxford such as active patient monitoring and medicines management. Contribution to patient and donor care or service development • national and international exemplar of the use of technology to improve clinical care (highlighted by update of our work in the NHS QIPP programme www.evidence.nhs.uk/qipp) • national and international model for modernisation of transfusion services, and • contribution to NHSBT’s Integrated Transfusion Services programme. A selection of the awards won by Professor Murphy and his team (see page 62). Research and Development Triennial Report 2009-12 23 Theme 1 3 Appropriate and safe use of blood components Systematic Review Initiative (SRI) Professor Mike Murphy [email protected] CONTRIBUTING TEAM MEMBERS: Simon Stanworth, Susan Brunskill, Dr Carolyn Dorée, Sheila Fisher, Dave Roberts, Nikki Curry, Lise Estcourt, Vipul Jairath, Chris Hyde , Sally Hopewell and Marialena Trivella The strategic aim of the SRI is to strengthen the evidence base of transfusion medicine by initiating, supporting and disseminating systematic reviews of both the randomised and non-randomised controlled trial literature. The work is linked to the development of new clinical trials and underpinning and/or challenging recommendations for practice. Publication of systematic reviews In the last three years we have published 16 systematic reviews, including systematic reviews of granulocytes for preventing infection, donation by stem cell or bone marrow: the donor experience, the role of the patient in blood transfusion safety, an overview of the randomised controlled trials evidence base for red blood cell transfusion and two reviews exploring the evidence for the bedside practice of transfusion medicine. Seven of our systematic reviews have been in collaboration with The Cochrane Collaboration and five have been significant updates of previously published systematic reviews (recombinant factor VIIa, antenatal interventions for fetomaternal alloimmune thrombocytopenia, platelet transfusions for patients with haematological malignancy, stem cell treatment for acute myocardial infarction and the use of fresh frozen plasma). Impact of our systematic reviews Of our reviews, eight have contributed to the development of at least one UK or international guideline for example our reviews of the acute management of trauma hemorrhage, trauma induced coagulopathy and recombinant factor VIIa were all included in the Canadian National Advisory Committee on Blood and Blood Products Massive Transfusion Consensus Conference and report of the panel 2011 and a number of others have formed the foundation for significant laboratory and clinical studies. Transfusion Evidence Library Another crucial area of our work is to identify and disseminate all published randomised controlled trials and systematic reviews in transfusion medicine. We launched our Transfusion Evidence Library (www.transfusionevidencelibrary.com) in September 2009. This is a fully searchable online database containing references to 780 high quality transfusion medicine systematic reviews, plus 1,520 fully indexed, randomised controlled trials obtained through hand searching conference proceedings from 1980 onwards. The library is updated monthly and over the coming months will contain references to relevant randomised controlled trials identified from comprehensive searches of Medline. In 2011 a logo was developed for the library and since then the library has permanent online links from four medical societies and one journal website. We are seeking to increase the dissemination of the library through 2012. Contribution to patient and donor care or service development • eight of our systematic reviews have been used to develop and guide practice in at least one UK or international guideline, and • our review of the safety of blood donation from individuals with treated hypertension or non-insulin dependent type 2 diabetes (2010) led to a change in practice in NHSBT and inclusion of these patients as blood donors. A number of our reviews, for example, trauma induced coagulopathy, fresh frozen plasma and prophylactic platelets in haematological malignancy have formed the foundation for significant ongoing laboratory, audits and clinical studies 24 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Simpson E, Lin Y, Stanworth S, Birchall J, Doree C, Hyde C. Recombinant factor VIIa for the prevention and treatment of bleeding in patients without haemophilia. Cochrane Database of Systematic Reviews 2012, Issue 4: CD005011 Brunskill S, Thomas S, Whitmore E, McDonald CP, Doree C, Hopewell S, Staves J, Cardigan R, Murphy MF. What is the maximum time that a unit of red blood cells can be safely left out of controlled temperature storage? Transfusion Medicine Reviews Epub 2011: Nov 25 Wilkinson KL, Brunskill SJ, Doree C, Hopewell S, Stanworth S, Murphy MF, Hyde C. The clinical effects of red blood cell transfusions: an overview of the randomised controlled trials evidence base. Transfusion Medicine Reviews 2011; 25 (2): 145-155, e2 Curry N, Hopewell S, Doree C, Hyde C, Brohi K, Stanworth S. The acute management of trauma haemorrhage: A systematic review of randomised controlled trials. Critical Care 2011; 15(2) R92 Transfusion Evidence Library can be accessed: http://www. transfusionevidencelibrary.com Group webpage: http://www.ndcls.ox.ac.uk/ ResGroups.php?GID=11 Theme Appropriate and safe use of blood components 1 3 NHSBT/Medical Research Council – Clinical Studies Unit Dr Charlotte Llewelyn [email protected] CONTRIBUTING TEAM MEMBERS: CSU Team: Alison Deary, Claire Dyer, Lise Estcourt, Fiona Goddard, Lekha Bakrania, Renate Hodge, Gillian Powter, Moira Malfroy, Kay Harding, Ana Mora, Tania Reed, Rupa Sharma, Jayne Gipp, Sue Barton, Louise Choo (MRC), Brennan Kahan (MRC), Anne Kelly, Catherine O’Donovan, Lynn Fraser, Diane Forrest, Beverley Jones, Heather Smethurst, Karen Willoughby, Sobiya Nadaraja (Kings), Simon Stanworth, Mike Murphy and Lorna Williamson RESEARCHERS: Nikki Curry, Vipul Jairath and Gemma Simons Between 2009-12 the Clinical Studies Unit (CSU) has worked on 26 trials. Eight trials are currently open to patient recruitment, five more are due to start in mid 2012, and 13 have been completed and are at varying stages of analysis and write up. Seventeen papers have been published relating to these and earlier CSU studies. A major focus has been the completion of two multi-centre international randomised controlled trials: Transfusion Alternatives in Preoperative sickle cell patients (TAPS) and a study of prophylactic platelet transfusion in patients with blood cancers (TOPPS), (see Williamson, page 21 and Stanworth, page 22). The CSU has also supported several studies to assess new blood components: 1. the Platelet Process Improvement Project (PPIP) randomised controlled trial to assess bleeding scores and increments comparing 2-5 day-old and bacterially screened 6-7 day old platelets 2. a cohort safety study (PRISM-A) demonstrated that transfusion of prion-filtered red cells to surgical patients did not increase the rate of alloimmunisation or transfusion reactions, and 3. the granulocytes in neutropenia (GIN-1) observational study showed that pooled, whole blood-derived granulocytes in additive solution and plasma had a similar safety profile to existing sources of granulocytes in neutropenic patients. New trials and a pilot study The Appropriate Use of Blood Strategy Group has agreed that new trials should fall mainly into two main themes: trials on clinical effectiveness of platelets (see Simon Stanworth, page 22), and trials in bleeding patients. The latter includes a feasibility study to investigate effects of early administration of cryoprecipitate to patients with major traumatic haemorrhage (CRYOSTAT), a pilot study to examine the usefulness of haemostatic ‘point of care’ tests in critical care patients with coagulopathy (ISOC-2), and a cluster randomised trial (TRIGGER) which will compare two haemoglobin thresholds for transfusing red cells to patients with gastro-intestinal bleeding. The CSU will continue to contribute to international efforts led by others, including a randomised controlled age of blood trial (ABLE) and NEPTUNIS, a survey of outcomes of neutropenic sepsis. During 2012-13, there will be a planned merger between the CSU and NHSBT’s Statistics and Clinical Audit team. This will facilitate broadening of CSU’s scope to support trials in other areas of NHSBT’s portfolio if required. RECENT PUBLICATIONS Massey E, Harding K, Kahan BC, Llewelyn C, Wynn R, Moppett J, Robinson SP, Green A, Lucas G, Sadani D, Liakopolou E, BoltonMaggs P, Marks DI & Stanworth S. The granulocytes in neutropenia 1 (GIN-1) study: a safety study of granulocytes collected from whole blood and stored in additive solution and plasma. Transfusion Medicine 2012; [Epub ahead of print 16 May 2012 doi:10.111/ j.1365‑3148.2012.01152x ] Muthukumar P, Venkatesh V, Curley A, Kahan BC, Choo L, Ballard S, Clarke P, Watts T, Roberts I, Stanworth S, for the Platelets Neonatal Transfusion Study Group. Severe thrombocytopenia and patterns of bleeding in neonates: results from a prospective observational study and implications for use of platelet transfusions. Transfusion Medicine 2012; [Epub ahead of print 27 Jun 2012 DOI:10.1111/ j.1365‑3148.2012.01171.x] Walsh TS, Stanworth SJ, Prescott RJ, Lee RJ, Watson DM, Wyncoll D; Writing Committee of the Intensive Care Study of Coagulopathy (ISOC) Investigators. Prevalence, management, and outcomes of critically ill patients with prothrombin time prolongation in United Kingdom intensive care units. Crit Care Med. 2010 Oct;38 (10):1939-46 Research and Development Triennial Report 2009-12 25 Theme 1 3 Appropriate and safe use of blood components Contribution to patient and donor care or service development The granulocyte component assessed in the GIN-1 trial is now offered as a routine NHSBT component. The PRISM-A report was accepted by the Department of Health’s safety committee (SaBTO) as part of the information needed to reach a final recommendation on implementation of the P-Capt prion filter. Theraflex (Jun 2010) Evaluation of platelet function in 12 platelet donors following pathogen inactivation with u/v C GIN (Nov 2010) Safety of pooled blood derived granulocytes in additive solution and plasma in 30 patients with neutropenic sepsis PPIP (Apr 2012) Comparing in-vivo efficacy of 2-5 day vs. 6-7 day platelets in 355 haemato-oncology patients HPA1a (Jan 2012) Evaluation of modified HPA1a antibody in 19 platelet donors Key Platelet trials Red cell trials CSU Completed Trials 2009 to 2012 TOPPS (Sep 2011) Comparing policy of prophylactic vs. non prophylactic platelet transfusions in 600 haemato-oncology patients Granulocyte trials CSU Completed Trials 2009-12 26 Research and Development Triennial Report 2009-12 TAPS (Mar 2011) Comparing policy of preoperative transfusion vs. no transfusion in 70 sickle cell patients PRISM-A (Apr 2011) Safety study of prion filtered red cells vs. standard red cells in 590 transfused surgical patients Donor Palmwarming (Jul 2011) Evaluating venepuncture related problems in 55 platelet-pheresis donors given heated vs. unheated palmwarmers Theme Appropriate and safe use of blood components 1 3 Components Development Laboratory Dr Rebecca Cardigan [email protected] CONTRIBUTING TEAM MEMBERS: Stephen Thomas, Philip Cookson, Saber Bashir, Mike Wiltshire, Martin Beard, Vicky Hancock, Sue Proffitt, Khairya Ishag, Lucy Backholer and Vijay Kaur The Components Development Laboratory has three key roles: 1. to develop novel methods for producing blood components of improved quality for transfusion 2. to evaluate commercial products designed to improve blood safety, to ensure that product quality is not adversely affected, and 3. to advise operational departments on methods for quality monitoring. Over the past three years the laboratory has focused on three areas: 1. filters to remove infectious prions (that transmit variant Creutzfeldt-Jakob Disease vCJD) from red cells 2. systems to kill viruses and bacteria in platelets, plasma or red cells, and 3. the effect of short-term deviations from recommended storage temperature of blood for transfusion. We have undertaken two laboratory studies on systems to inactivate pathogens in platelets and red cells. In collaboration with a commercial sponsor, we have assessed an alternative system designed to inactivate pathogens in platelets by exposing them to UVC light. We performed a clinical study in healthy volunteers to investigate whether treating platelets in this way affects their ability to circulate once they have been transfused. The sponsor is now proceeding to further clinical studies in patients. NHSBT is frequently asked for advice on the likely impact of storing red cells or plasma outside of their recommended storage temperature for short periods of time such as may occur when equipment in blood centres or hospitals breaks down. There is a lack of evidence on which to make informed decisions regarding whether affected components are safe to transfuse, which led us to undertake a series of studies to address this. RECENT PUBLICATIONS Thomas S, Hancock V, Cardigan R. The 30-minute rule for red blood cell concentrates – in vitro quality assessment of red cells repeatedly exposed to 30ºC. Transfusion 2012. In press Cookson P, Thomas S, Marschner S, Goodrich R, Cardigan R. In vitro quality of single-donor platelets treated with riboflavin and ultraviolet light and stored in platelet storage medium for up to eight days. Transfusion 2012; 52:983-94 Cardigan R, Themessl A, Garwood M. Short-term Deviations in Temperature During Storage of Plasma at -40ºC Do Not Affect Its Quality. Transfusion; 51:1541-1545 Cardigan R, Van der Meer PF, Pergande C, Cookson P, BaumannBaretti B, Cancelas JA, Devine D, Gulliksson H, Vassallo R, de WildtEggen J. Coagulation factor content of plasma produced from whole blood stored for 24 hours at ambient temperature: results from an international multicenter BEST Collaborative study. Transfusion 2011; 51 Suppl 1:50S-57S We contributed to a systematic review of the literature to determine the maximal time that a unit of red blood cells can be safely left out of controlled temperature storage, as may occur when hospitals test it for compatibility with the patients blood, or to transport them. Currently, units out of controlled temperature for 30 minutes are discarded, on the basis of little evidence. This led to us to perform several studies to assess the effect of storing red cells at room temperature on repeated occasions. In conjunction with Professor Ouwehand’s group (NHSBT, University of Cambridge) and the Clinical Studies Unit, we have recently started a clinical study to investigate whether variation in the function of platelets in the blood donor population affects their efficacy following transfusion. The study aim is to establish whether platelets from some donors may be more beneficial for certain groups of patients. Research and Development Triennial Report 2009-12 27 Theme 1 3 Appropriate and safe use of blood components Components Development Laboratory Contribution to patient and donor care or service development Our work on prion reduction has led to new specifications being approved for these components in the UK, in readiness to introduce this technology should it be recommended to do so. Our study on deviations in the normal storage temperature of plasma has been used to develop guidance that can be used by hospitals/blood centres as part of their risk assessment of whether affected units of plasma can be transfused. We also have undertaken a review of the storage/thawing temperature for plasma components. This resulted in a change in UK guidance to blood centres and hospitals to allow greater flexibility. 28 Research and Development Triennial Report 2009-12 Theme Erythrocyte biology and immunology 1 4 Making and manipulating red blood cells in health and disease Dr Ashley Toye [email protected] CONTRIBUTING TEAM MEMBERS: Mandy Bell, Alex Gampel, Bethan Hawley, Kathryn Mordue, Steph Pellegrin, Timothy Satchwell and Charlotte Severn It is particularly challenging for NHSBT to provide blood products to patients who possess rare blood group types or for patients with multiple alloantibodies due to frequent transfusions (eg patients with Sickle Cell or beta thalassemia). One exciting solution is to culture red cells required for transfusion from haematopoietic stem cells harvested from waste donor blood but further optimisation is needed to generate the amounts of cells required for transfusion. Importantly, whilst we further optimise the culture process we can use these culture systems to study red cell development in health and disease. To study the process of erythropoiesis, our group has established a 2D in vitro erythroid culture system. We use CD34+ population or take all the stem cells present in the peripheral blood mononuclear cell (PBMC) population to reproduce the different stages of erythropoiesis from the proerythroblast to reticulocytes (van den Akker et al, 2010). Enucleating erythroblast stained with RhAG monoclonal antibody LA18.18 and the DNA stain DAPI. Image provided by Mandy Bell, University of Bristol. We also use dexamethasone to delay terminal differentiation and then remove it to allow erythroblasts to synchronously differentiate. We have used this culture system alongside proteomics to monitor alterations in protein abundance (eg after EPO withdrawal [Pellegrin et al, 2012]) and to investigate the processes behind the assembly of the specialised red blood cell membrane in health and disease. For example, we have compared the erythroid protein expression of erythroblasts generated from a Hereditary Spherocytosis patient with that of a normal donor, throughout terminal differentiation to the reticulocyte stage (van den Akker et al, 2010) identifying when characteristic alterations arise. We also demonstrated that in normal donor erythroblasts the assembly of blood group protein membrane complexes containing band 3 or Rhesus proteins begin during the early (basophilic stage) of erythropoiesis (Satchwell et al, 2011) and these key membrane proteins are delivered to the plasma membrane within 72 hours. This expression profile means that designer blood cells are feasible and our laboratory is now in the process of manipulating erythroid membrane protein expression. In collaboration with researchers in Imperial College (Dr Anthanasios Mantalaris and Dr Nicki Panoskaltsis), we are also exploring the use of bioengineered scaffolds to mimic how the human body manufactures blood in the bone marrow. Recapitulating the in vivo environment of the bone marrow niche should significantly reduce the cost of red blood cell manufacture in the future, due to increased erythrocyte production per stem cell input, and a reduction of both media volumes and dependence on expensive cytokines. Research and Development Triennial Report 2009-12 29 Theme 1 4 Erythrocyte biology and immunology Contribution to patient and donor care or service development A significant proportion of transfusion recipients have acute or chronic abnormalities of erythropoiesis. Furthermore, for some patients with rare blood group types or for patients with the presence of multiple alloantibodies due to frequent transfusions (eg Sickle Cell or Beta Thalassemia) it is difficult to source appropriately matched blood. To help address these issues, we are culturing haematopoietic stem cells from donors, natural blood group variants and also from patients with a variety of red cell diseases. This work will provide a better understanding of how red blood cells are made, will also help us maximise red blood cell manufacture for bespoke erythrocytes for transfusion and to improve our understanding about how this vital process can go wrong in different human red blood cell diseases. RECENT PUBLICATIONS Pellegrin S, Heesom KJ, Satchwell TJ, Hawley BR, Daniels G, et al, (2012) Differential Proteomic Analysis of Human Erythroblasts Undergoing Apoptosis Induced by EpoWithdrawal. PLoS ONE 7(6): e38356. Anstee DJ, Gampel A and Toye AM (2012). Ex vivo generation of human red cells for transfusion. Curr Opin Hematol 19, 163-9 Satchwell TJ, Bell AJ, Pellegrin S, Kupzig S, Ridgwell K, Daniels G, Anstee DJ, van den Akker E and Toye AM (2011) Critical band 3 multiprotein complex interactions establish early during human erythropoiesis. Blood 118, 182-91 van den Akker E, Satchwell TJ, Pellegrin S, Flatt JF, Maigre M, Daniels G, Delaunay J, Bruce LJ and Toye AM (2010b) Investigating the key membrane protein changes during in vitro erythropoiesis of protein 4.2 (-) cells (mutations Chartres 1 and 2). Haematologica 95, 1278-86 Group webpage http://www.bristol.ac.uk/ biochemistry/research/at.html Scanning electron microscope image of a polyurethane scaffold containing peripheral blood haematopoietic stem cells. Image provided by Dr Alex Gampel, University of Bristol. 30 Research and Development Triennial Report 2009-12 Theme Erythrocyte biology and immunology 1 4 Structure and function of red blood cells Professor David Anstee [email protected] CONTRIBUTING TEAM MEMBERS: SF Parsons, LJ Bruce, BK Singleton, TJ Mankelow, RE Griffiths, NM Burton, S Taylor (Kupzig), N Cogan, FA Spring and JF Flatt Red blood cells are essential for life because they are the body’s vehicle for transporting oxygen from the lungs to the tissues and carbon dioxide from the tissues to the lungs. Consequently, providing anaemic patients with red blood concentrates prepared from blood donations is a major function of NHSBT. Our work aims to further understanding of how red cells are made and how they function in order to develop new and improved red cell products for patients and to elucidate the underlying causes of disease in patients with red cell disorders. In the past three years we have developed a method for generating red cells in the laboratory from stem cells, found in the waste products of normal blood donations, and shown that these very young red cells have normal function. These results mean that red cells grown in culture could be used for patient treatment in the future if we can expand the numbers of red cells we grow. To do this we need to understand more about the proteins involved in regulation of red cell production. Rare form of anaemia We were the first to identify genetic mutations in the human gene (EKLF/KLF1) encoding a protein essential for the regulation of red cell production. We showed that most mutations are benign but are associated with slightly raised levels of the fetal type of haemoglobin. However, one particular mutation causes a rare form of anaemia and very high levels of fetal haemoglobin. Mutations in EKLF have since been reported in a subset of patients with unexplained haemoglobin disorders. Red cell disorders In certain diseases (eg hereditary stomatocytosis), red cells are unusually permeable to potassium and we have been investigating the reasons for this. We have found a number of mutations in multi-spanning membrane proteins (SLC4A1, RHAG, SLC2A1). These mutant proteins are expressed in the red cell membrane and increase permeability by forming cation channels or by disrupting the integrity of the membrane. Contribution to patient and donor care or service development Our work contributes to patient care through the development of cultured red cells for use as a new therapeutic red cell product and by identifying the causative mutations in rare red cell diseases we provide a reliable and precise method of diagnosis for these patients. Figure 1. Showing mature red blood cells from peripheral blood. sdCHC is one of the hereditary stomatocytosis group of cation permeable diseases and is caused by a Gly286 to Asp286 mutation in the glucose transporter (SLC2A1). The mutation causes the loss of stomatin (a protein involved in vesicle formation) during reticulocyte maturation. Figure 2. Enucleating early red blood cell (reticulocyte). Green: Cell surface marker glycophorin A; Blue: Nucleus RECENT PUBLICATIONS Griffiths RE, Kupzig S, Cogan N, Mankelow TJ, Betin VM, Trakarnsanga K, Massey EJ, Lane JD, Parsons SF, Anstee DJ. Maturing reticulocytes internalise plasma membrane in glycophorin A – containing vesicles, which fuse with autophagosomes prior to exocytosis. Blood 2012 Jun 28; 119(26): 6296-306. Epub 2012 Apr 6 Singleton BK, Lau W, Fairweather VS, Burton NM, Wilson MC, Parsons SF, Richardson BM, Trakarnsanga K, Brady RL, Anstee DJ, Frayne J. Mutations in the second zinc finger of human EKLF reduce promoter affinity but give rise to benign and disease phenotypes. Blood 2011 Sep 15;118(11):3137-45. Epub 2011 Jul 21 Flatt JF, Guizouarn H, Burton NM, Borgese F, Tomlinson RJ, Forsyth RJ, Baldwin SA, Levinson BE, Quittet P, Aguilar-Martinez P, Delaunay J, Stewart GW, Bruce LJ. Stomatindeficient cryohydrocytosis results from mutations in SLC2A1: a novel form of GLUT 1 deficiency syndrome. Blood 2011 Nov 10;118(19):5267-77. Epub 2011 Jul 26 Giardine B, Borg J, Higgs DR, Peterson KR, Philipsen S, Maglott D, Singleton BK, Anstee DJ, Basak AN, Clark B, Costa FC, Faustino P, Fedosyuk H, Felice AE, Francina A, Galanello R, Gallivan MV, Georgitsi M, Gibbons RJ, Giordano PC, Harteveld CL, Hoyer JD, Jarvis M, Joly P, Kanavakis E, Kollia P, Menzel S, Miller W, Moradkhani K, Old J, Papachatzopoulou A, Papadakis MN, Papadopoulos P, Pavlovic S, Perseu L, Radmilovic M, Riemer C, Satta S, Schrijver I, Stojiljkovic M, Thein SL, Traeger-Synodinos J, Tully R, Wada T, Waye JS, Wiemann C, Zukic B, Chui DH, Wajcman H, Hardison RC, Patrinos GP. Systematic documentation and analysis of human genetic variation in hemoglobinopathies using the microattribution approach. Nat Genet. 2011 Mar 20;43(4):295-301 Group webpage http://ibgrl.blood.co.uk Research and Development Triennial Report 2009-12 31 Theme 1 4 Erythrocyte biology and immunology Erythropoiesis in health and disease Professor David Roberts [email protected] CONTRIBUTING TEAM MEMBERS: Abigail Lamikanra, Alison Merryweather-Clarke, Hoi Pat Tsang, Asoke Nandi, Suzanne Watt, Lee Carpenter, Yang-Cheng Tao, Jackie Boultwood, Andrea Pellagati and Oscar Bon Yip There is a need for alternative novel sources of red blood cells both for therapy and for diagnostic use, where cells from individuals with uncommon combinations of red cell antigens can be used in panels of cells with rare blood groups for antibody testing. The expansion of red blood cells in the laboratory can help to address these needs. Improving the expansion and differentiation of red cells in the laboratory and in patients who have bone marrow disorders needs a detailed understanding of cellular biology and gene expression during red cell development (erythropoiesis) in healthy individuals and during disease. We have previously identified many novel patterns of gene expression during erythropoiesis in culture. Discrete populations of red cell precursors were isolated based on identification of cellular markers. Each population represented one of four different stages of erythropoiesis. This allowed precise identification of genes expressed at each stage of erythropoiesis and identification of more genes whose expression changed during development of red cells than previously observed in less well defined mixed populations of precursors1 (Figure 1). Alongside this work, new computational tools have been developed to validate gene expression data2. These tools are now being applied to studying gene expression in red cell precursors derived from cord blood, peripheral blood and human induced pluripotent stem cells (iPS). Human iPS can be derived from the fibroblasts or blood of donors with rare blood antigens to provide reagents for screening panels used in diagnostic laboratories. We have optimised production of haematopoietic progenitors from human iPS cells from fibroblasts3. The haematopoietic progenitors derived from these have been used to generate red cell precursors that express a range of red cell antigens that indicate their potential for use in diagnostic laboratories (Figure 2). We are also studying defective erythropoiesis in red cells grown from the bone marrow cells of patients with 5q- myelodysplastic syndrome (MDS). We have identified a defect in the cellular machinery that produces functional proteins from messenger RNA. The addition of L-leucine to these red cells grown in culture reduced the characteristics associated with MDS highlighting its potential for use in approaches to specifically treat 5q- MDS4. Taken together this work, funded by a National Institute for Health Research (NIHR) programme grant, will help to define and improve red cell development in the laboratory and we hope improve treatment for patients with red cells disorders. Contribution to patient and donor care or service development The clinical need for alternative novel sources of red blood cells is considerable, not only for patients who are difficult to cross match and require repeated transfusion but also where rare groups are required for specific diagnostic applications. Improvement of current methods used to produce red cells in the laboratory will be aided by a detailed understanding of gene expression changes during erythropoiesis. This knowledge may also lead us to novel treatments for people suffering from anaemia due to abnormal development of red blood cells in the bone marrow. 32 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Merryweather-Clarke AT, Atzberger A, Soneji S, Gray N, Clark K, Waugh C, McGowan SJ, Taylor S, Nandi AK, Wood WG, Roberts DJ, Higgs DR, Buckle VJ, Robson KJ. Global gene expression analysis of human erythroid progenitors. Blood. 117:e96-108 (2011) 1 Fa R and Nandi AK. Parametric validity index of clustering for microarray gene expression data, in IEEE Int. Workshop Machine Learning for Sig. Process 2011 (MLSP 2011), 2011 2 Carpenter L, Malladi R, Yang CT, French A, Pilkington KJ, Forsey RW, Sloane-Stanley J, Silk KM, Davies TJ, Fairchild PJ, Enver T, Watt SM. Human induced pluripotent stem cells are capable of B-cell lymphopoiesis. Blood 2011 Apr 14;117(15):4008-11 3 Yip BH, Pellagatti A, Vuppusetty C, Giagounidis A, Germing U, Lamikanra AA, Roberts DJ, Fernandez-Mercado M, McDonald EJ, Killick S, Wainscoat JS, Boultwood J. Effects of L-leucine in RPS14-deficient erythroid cells. Leukaemia 2012 Mar 20: 1-4 4 Figure 1 Theme Erythrocyte biology and immunology A. 1 4 B. Figure 1. Expression dynamics of the most significantly regulated transcripts during erythropoiesis. A FIve-way Venn diagram of the 327 most significantly differentially expressed genes showing the overlap of fold change combinations between stages of erythropoiesis: Late-E (L) and one of CFU-E (C, green), Pro-E (P, blue), or Int-E (I, red). The wide magenta arc represents genes differentially regulated between Pro-Es and Int-Es. The narrower yellow arc represents genes differentially regulated between CFU-E and Int-E. The colours merge where the shapes intersect each other. B Five-way Venn diagram of the 327 most significantly differentially expressed transcripts showing the overlap of fold combinations (see panel A). The white numbers represent the number of up-regulated genes whilst the black numbers represent the number of genes that are down regulated. Figure 2. Expression of Red Cell Antigens on Erythroid Cells Derived from iPS. The expression of antigens in red cell precursors derived from human iPSC (iPSC) or from human adult stem cells (CD34) was compared with expression of the respective antigens seen in mature red cells (RBC). Research and Development Triennial Report 2009-12 33 Theme 1 4 Erythrocyte biology and immunology Red cell diagnostics Professor Marion Scott [email protected] CONTRIBUTING TEAM MEMBERS: Geoff Daniels, Jacky Gilmour, Kay Ridgwell, Rosey Mushens, Matt Burden, Vanya Crew, Jonathan Dixey, Niamh Durcan, Kirstin Finning, Carole Green, Frances Green, Alan Guest, John Hosken, Matt Hazell, Becky Lewis, Louise Tilley, Sue Tovey, Piers Walser, Marcin Wozniak and Laura Barry Blood group phenotyping and pre-tranfusion cross-matching has for over a century relied almost entirely on serological methodology. Now the determination of the molecular basis of the major clinically significant blood groups has paved the way for the introduction of novel techniques for pretransfusion compatibility testing. We have carried out a large scale trial of commercially available genotyping systems, and are carrying out research into new sequence based methods for typing. Molecular biology technology has also permitted the production of novel recombinant blood group antigens and antibodies to improve the detection of blood group antibodies and antigens. We have also been working on the growth of red cells from their precursors in the lab, to produce ‘designer’ reagent red cells for the detection and identification of antibodies. We have evaluated three commercially available blood group genotyping platforms using a panel of over 1,000 DNA samples from NHSBT blood donors of known extended phenotype. In all cases, the serologically determined phenotype concurred with the phenotype predicted by the commercial genotyping platforms. Further developments in technology These low to medium throughput systems are thus currently suitable for extended minor blood group genotyping of selected groups of donors and patients, and are in process of being implemented in NHSBT. Routine high throughput blood group typing of large numbers or all donors and patients would allow the safe allocation of blood without further compatibility testing, by full electronic cross-matching. We are currently exploring further developments in technology, such as next generation pooled sequencing, to see if we can achieve this goal. We are working with a commercial diagnostics supplier to develop recombinant red cell antigens and antibodies for use in novel technology systems for the detection and quantitation of antibodies and antigens. This partnership approach has led to the accelerated development of these molecules, and the demonstration that they can provide reliable sensitive systems for clinical use. We have shown that we can grow red cells from precursor cells in the laboratory for use as specialist ‘designer’ reagent red cells. We have shown that we can scale-up production of these cells for diagnostic use, and that they perform well in a range of serological techniques. We have also been working on improvements to existing red cell diagnostics, and have developed a technique for the accurate quantitation of antibodies during pregnancy, using flow cytometry. 34 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Wozniak MJ, Bowring C, Lucas G, Ridgwell K. Detection of HNA-3a and 3b antibodies using transfected cell lines and recombinant proteins. Transfusion 2012 Jul;52: 1458-1467 Volume 52, Issue 7, July 2012, Pages: 1458–1467 Tilley L, Green C, Poole J, Gaskell A, Ridgwell K, Burton NM, Uchikawa M, Tsuneyama H, Ogasawara K, Akkøk CA, Daniels G. A new blood group system, RHAG: three antigens resulting from amino acid substitutions in the Rh-associated glycoprotein. Vox Sang 2010 Feb;98(2):151-9 Daniels G, Finning K, Martin P, Massey E. Non-invasive prenatal diagnosis of fetal blood group phenotypes: current practice and future prospects. Prenat Diagn. 2009; 29(2):101-7 Group webpage http://IBGRL.blood.co.uk/ research/Prog3/Prog3-frames.htm Theme Erythrocyte biology and immunology 1 4 Contribution to patient and donor care or service development All RhD-negative pregnant women are currently offered treatment with anti-RhD immunoglobulin during pregnancy to prevent antenatal RhD immunisation and subsequent potential haemolytic disease of the foetus and new-born. However, about 40% of these women are carrying a RhD-negative fetus, and so receive the treatment unnecessarily. We have developed a high throughput automated method of determining fetal RhD type from maternal plasma. This has the potential to reduce the wastage and cost of anti-RhD immunoglobulin and also save 40,000 pregnant women per year from unnecessary treatment with a pooled blood product. A regional pilot trial is currently underway. Research and Development Triennial Report 2009-12 35 Theme 1 5 Platelet biology and genomics Placing signposts in the genome for the formation and function of platelets Professor Willem Ouwehand [email protected] CONTRIBUTING TEAM MEMBERS: Cornelis Albers, Ana Cvejic, Nicola Foad, Stephen Garner, Augusto Rendon, Jennifer Sambrook and Peter Smethurst The focus of the genomics programme is on one type of blood cell, named the platelet. Since their discovery in 1841 as the “Minute Spherules about 1/10,000 of an Inch”, scientists have largely remained incognisant of the genes that regulate their formation. An understanding of the molecular mechanisms that control the mass of platelets and their pro-thrombotic function is relevant for diseases like heart attacks and stroke, the number one killer. Additionally it will aid studies to generate platelets from pluripotent stem cells either to replace classic donor-derived platelet concentrates or to generate platelets with specific functional features, ie for vessel wall repair from gene-engineered stem cells (see Ghevaert, page 42). In the 2009 Report we described the use of a Genome Wide Association Scan (GWAS) to identify the first four genes that regulate the count and volume of platelets. A global collaboration by the HaemGen consortium (co-leads Dr Christian Gieger, Prof Willem H Ouwehand and Dr Nicole Soranzo) expanded the GWAS to nearly 67,000 healthy individuals and identified another 64 independent association signals1. Nearly all sentinel SNPs (the ones with lowest P-value of association) were localised within 10kb of a gene allowing inference of gene candidacy. The functional roles in megakaryopoiesis and platelet formation of the vast majority of these genes are unknown. To close this knowledge gap we silenced genes in zebrafish and profound effects on the formation of thrombocytes were observed for 23 of the 27 genes investigated so far (see Cvejic, page 40). With the GWAS era coming to an end, studies have re-focussed on the discovery of genes that underlie rare platelet bleeding disorders. Next generation sequencing made it feasible to survey the ~64Mb coding fraction of the genome or so called exome. The exome sequencing of four Grey Platelet Syndrome cases and six with Thrombocytopenia and Absent Radii (TAR) identified NBEAL22 and RBM8A3 as causative genes, respectively. The former was a classic example of autosomal recessive coding mutations, but the genetic architecture of TAR is more complex. A deletion on 1q21.1 on one haplotype is typically accompanied by a 5’ UTR SNP in the RBM8A gene. RECENT PUBLICATIONS 1 Gieger C*, Radhakrishnan A*, Cvejic A*, et al, (2011). New gene functions in megakaryopoiesis and platelet formation. Nature, 480, 201–208 2 Albers CA*, Cvejic A*, Favier R, et al, (2011). Exome sequencing identifies NBEAL2 as the causative gene for Gray Platelet Syndrome. Nat Genet, 43, 735–737 Albers CA*, Paul DS*, Schulze H*, et al, (2012). Inheritance of lowfrequency regulatory SNPs and a rare null mutation in exon-junction complex subunit RBM8A causes TAR. Nat Gen, 44, 435–439 3 4 Tijssen MR*, Cvejic A*, Joshi A, et al, (2011). Genome-wide analysis of simultaneous GATA1/2, RUNX1, FLI1, and SCL binding in megakaryocytes identifies hematopoietic regulators. Developmental Cell, 20, 597-609 *authors contributed equally Group webpage http://www.haem.cam.ac.uk The functional importance of this SNP was inferred from the annotation of the genomes in megakaryocytes4 and erythroblasts (see Rendon, page 37). Genotyping in the Cambridge BioResource of 12,000 individuals (see Foad, page 11) showed a one in 30 frequency for the UTR-SNP with no apparent effect on platelet count in individuals homozygous for the minor allele. Patients with a heart attack or after angioplasty receive two platelet-inhibiting drugs, sometimes even three, to reduce the chance of recurrence of thrombus formation. Bleeding occurs as a side effect in ~1.5% of patients, often requiring transfusion of blood and platelets. The use of anti-platelet drugs will be one of the first areas in which precision medicine will be pioneered and implemented. To deliver this innovation we need to fully appreciate how the interaction between our genes and environment shapes the mass of platelets and their function. For this translation to succeed a partnership between academia, health care providers, pharmaceutical and biotechnology companies and regulators is required. (A) Protein-protein interaction (PPI) network of platelet GWAS loci. 44 of the 67 core genes connected through first-order interactions in a network containing 785 nodes and 1,085 edges. For the nodes genes are represented by round symbols, where node colour reflects gene transcript levels in megakaryocytes on a continuous scale from low (dark green) to high (white). Greycoloured round symbols identify first-order interactors identified in Reactome and IntAct. Core genes not connected to the main network are omitted. The 34 core genes are identified by a blue perimeter. Yellow perimeters identify five additional genes (VWF, PTPN11, PIK3CG, NFE2 and MYB) with known role in haemostasis and megakaryopoiesis and mapping to within the association signals at distances greater than 10kb from the sentinel SNPs. Network edges obtained from the Reactome (blue) and IntAct-like (red) databases and through manual literature curation (black). The full network, containing gene expression levels and other annotation features, is available in Cytoscape format for download (see recent publications1). 36 Research and Development Triennial Report 2009-12 Platelet biology and genomics Theme 1 5 Functional genomics interpretation of the genetic determinants of haematological parameters Dr Augusto Rendon [email protected] CONTRIBUTING TEAM MEMBERS: Anthony Attwood, Stuart Meacham, John Ord, Aparna Radhakrishnan and Yagnesh Umrania The application of statistical genomics and computational biology has become essential in blood cell biology research. Genome wide association scans (GWAS) carried out by our collaborators and ourselves have led to the identification of nearly 150 regions of the genome, many of which were previously unknown, where common differences in the DNA sequence result in changes in the way red cells and platelets are produced. GWAS has achieved great success at identifying areas of the genome associated with the size and number of these cells; however, because of the correlation between DNA variants – linkage disequilibrium – the actual genes and genetic mechanisms responsible for the association cannot be readily inferred. To overcome this limitation, we have functionally annotated the genomes of the progenitor cells of the red cells and platelets (erythroblasts and megakaryocytes, respectively). In particular, we have traced the expression of all genes by whole genome expression arrays as these two cells differentiate from their haematopoietic progenitors. For end-stage differentiated erythroblasts and megakaryocytes, we have also mapped genome-wide regions of open chromatin, various other epigenetic marks and transcription factor binding sites, as well as sequenced their RNA. This functional annotation has allowed us to identify putative causative genes, two thirds of which are novel regulators of erythropoiesis and megakaryopoiesis and for which we have provided experimental validation in model organisms (see Cvejic, page 40). By analysing the expression patterns of these genes we have also concluded that common sequence variation affect genes active during the late stages of differentiation in a lineage-specific manner rather than at the megakaryocyte-erythroblast progenitor cell level. For two genomic regions at 1q24.3 (DNM3) and 7q22.3 (PIK3CG), we have also defined the genetic mechanisms underlying the observed association between common sequence variants at these loci and the volume of platelets. GWAS have the unparalleled advantage of providing a broad and unbiased catalogue of genes implicated in controlling the mass of red cells and platelets, but this catalogue is incomplete. To increase our understanding of the molecular processes controlling the formation of platelets from megakaryocytes, we have also developed a high quality protein-protein interaction network of 785 nodes (proteins) and 1,085 edges (pathway reactions) by conservatively expanding our list of known regulators with first order interacting proteins. This has provided an unprecedented picture of the molecular architecture of the formation of this blood cell type. Contribution to patient and donor care or service development The functional annotation of the genome of erythroblasts and megakaryocytes ultimately will provide a greater insight in the regulation of gene transcription, which drives the fating events at branch points during differentiation of the haematopoietic stem cell. The integration of this information by means of computational biology and statistical genomics is essential in defining the molecular mechanisms by which GWAS-identified genes control the formation of red cells and platelets. The knowledge about these molecular mechanisms is critical for the development of methods to generate both blood cell types from pluripotent stem cells in the laboratory. Research and Development Triennial Report 2009-12 37 Theme 1 5 Platelet biology and genomics RECENT PUBLICATIONS Soranzo N, et al. A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium. Nat Genet 41, 1182–1190 (2009) Paul DS, et al. Maps of Open Chromatin Guide the Functional Follow-Up of Genome-Wide Association Signals: Application to Hematological Traits. PLoS Genet 7, e1002139 (2011) Gieger C, et al. New gene functions in megakaryopoiesis and platelet formation. Nature 480, 201–208 (2011) Wang D, Rendon A, Ouwehand W and Wernisch L. Transcription factor co-localization patterns affect human cell type-specific gene expression. BMC Genomics 13, 263 (2012) The functional annotation of the DNM3 locus shown across three panels: A The DNM3 locus at 1q24.3 spans about 500kb and the sentinel SNP associated with platelet volume at a P-value of 1.11 x 10 -24 as identified by GWAS is rs109141441. B Formaldehyde-Assisted Isolation of Regulatory Elements (FAIRE) shows regions of open chromatin, with one at variant rs2038479, which is high Linkage Disequilibrium with the sentinel SNP. Chromatin immunoprecipitation combined with massive parallel sequencing. (ChIP-seq) showed that the latter SNP marks a binding site for the transcription factor MEIS1 and the same 'intronic' element is transcribed in megakaryocytes as shown by RNA-seq. C Variant rs2038479 marks an alternative DNM3 promoter encoding for a DNM3 molecule which lacks its GTPase domain. This alternative transcript is only present in megakaryocytes and not in other tissues in which the DNM3 gene is transcribed. 38 Research and Development Triennial Report 2009-12 Theme Platelet biology and genomics 1 5 A blueprint of haematopoietic epigenomes Professor Willem Ouwehand [email protected] CONTRIBUTING TEAM MEMBERS: Mattia Frontini, Kate Downes, Daniel Hampshire, Frances Burden and Samantha Farrow The BLUEPRINT consortium has been formed with the aim to further the understanding of how genes are activated or repressed in both healthy and diseased human cells with particular focus on distinct types of haematopoietic cells from healthy individuals and on their malignant leukemic counterparts. It aims to generate at least 100 reference epigenomes and study them to advance and exploit knowledge of the underlying biological processes and mechanisms in health and disease. Reference epigenomes will be generated by state-of-the-art technologies from highly purified cells for a comprehensive set of epigenetic marks in accordance with quality standards set by IHEC. This resource-generating activity will be complemented by hypothesis-driven research into blood-based diseases, including common leukaemia and autoimmune disease (Type 1 Diabetes), by discovery and validation of epigenetic markers for diagnostic use and by epigenetic target identification. Since epigenetic changes are reversible, they can be targets for the development of novel and more individualised medical treatments. The Cambridge team has the task of purifying healthy cell types from NHSBT donors. Contribution to patient and donor care or service development Blueprint will generate a reference resource that will allow medical professionals worldwide to compare data generated from patients with healthy individuals. Moreover defects in epigenetic regulation are emerging as one of the leading causes of many diseases. Identification of key epigenetic factors and compounds able to inhibit or enhance their function are at the forefront of personalised medicine. Group webpage http://www.blueprint-epigenome.eu Research and Development Triennial Report 2009-12 39 Theme 1 5 Platelet biology and genomics Elucidating the function of novel genes in haematopoiesis in zebrafish Dr Ana Cvejic PhD [email protected] CONTRIBUTING TEAM MEMBERS: Dana C Bellissimo, Ewa Bielczyk, Nicolas Brieu* and Jovana Serbanovic-Canic *Computer Aided Medical Procedures, Technische University of Munich, Munich, Germany Zebrafish as a model organism combines the advantages of both invertebrate and vertebrate model systems. The genes orchestrating both haematopoiesis and haemostasis are highly conserved providing a highly suitable model system to rapidly investigate the function of novel genes. Genomics studies (see Ouwehand, page 36) have identified a plethora of novel genes, which are assumed to play critical, and pathway restricted roles in megakaryopoiesis and the formation and function of platelets. The accurate placement of the proteins encoded by these novel genes in the protein-protein interaction network, which regulates these processes, requires experimental studies in model organisms, like zebrafish. These studies benefit from mathematical algorithms for the automated interpretation of phenotype. To achieve this we collaborated with Prof Nassir Navab’s team at the Technical University of Munich and developed a method to automatically interpret thrombus formation after laser-induced vessel wall damage in a sensitive and specific manner1. In parallel, quantitative methods were validated to enumerate the number of different blood cell elements, including haematopoietic stem cells and thrombocytes. First, these methods were used to determine the role of meis1, during zebrafish primitive and definitive haematopoiesis. Analysis of our compendium of transcripts in mature human blood cell elements showed that the MEIS1 transcript was the only transcription factor-encoding transcript abundantly present in megakaryocytes but absent from others. Meis1 silencing by morpholino injection ablates erythroid and thrombocyte formation2. In addition, it leads to dramatic single arteriovenous tube formation. Nuclear entry of meis1 depends on its interaction with pbx1 and as expected knockdown of pbx1 results in a strikingly similar phenotype to that of meis1 knockdown. GWAS and ChIP-seq3 identified 68 and 151 genes, which putatively encode important regulators of megakaryopoiesis and platelet formation. Two thirds of these encode proteins of unknown function. To gain insight in their role, 17 were selected for silencing in zebrafish and for all but three profound effects on both thrombopoiesis and interestingly also on erythropoiesis were observed. Further studies on the guanine nucleotide exchange factor arhgef3 showed its role in erythropoiesis through activation of rhoa. Lentiviral mediated silencing in human K562 cells identified ARHGEF3 as a new regulator of iron homeostasis. Finally, exome sequencing revealed NBEAL2 as the causative gene of Grey Platelet Syndrome and silencing of its homologue showed severe spontaneous bleeding in about 20% of the zebrafish. Contribution to patient and donor care or service development The studies in zebrafish in Dr Derek Stemple’s laboratory at the Wellcome Trust Sanger Institute are essential in elucidating the function of novel genes. The juxtaposition of these studies between the genomics efforts (Ouwehand, page 36) and the programme on human pluripotent stem cells (Ghevaert, page 42) has created a unique opportunity to transform our understanding of the intricacies of the molecular regulation of platelet formation and function. This will eventually have its bearing on the care of patients with heart attacks or stroke and the provision of platelet concentrates by NHSBT for patient care. 40 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Brieu N, Navab N, SerbanovicCanic J, Ouwehand WH, Stemple DL, Cvejic A*, Groher M*, (2012). Imagebased Characterization of Thrombus Formation in Time-lapse DIC Microscopy. Medical Image Analysis, 16(4):915-31. (*joint last authors) 1 Cvejic A, Serbanovic-Canic J, Stemple DL, Ouwehand WH, (2011). The role of meis1 in primitive and definitive haematopoiesis during zebrafish development. Haematologica, 96(2): 190-198 2 Tijssen MR*, Cvejic A*, Hannah RL, Ferreira R, Forrai A, Bellissimo DC, Joshi A, Wilson NK, Wang X, Ottersbach K, Stemple DL, Green AR, Ouwehand WH, Göttgens B, (2011). Genome-wide analysis of GATA1, GATA2, RUNX1, FLI1 and SCL binding in megakaryocytes identifies 8 new hematopoietic regulators. Developmental Cell, 20(5):597-609. (*joint first authors) 3 Serbanovic-Canic J*, Cvejic A*, Soranzo N, Stemple DL, Ouwehand WH, Freson K, (2011). Silencing of RhoA nucleotide exchange factor, ARHGEF3 reveals its unexpected role in iron uptake. Blood, 118(18):4967-76. (*joint first authors) Group webpage http://www.haem.cam.ac.uk Theme Platelet biology and genomics 1 5 Platelet biology and quantitative trait loci Stephen Garner and Dr Peter Smethurst [email protected] and [email protected] Stephen Garner Dr Peter Smethurst CONTRIBUTING TEAM MEMBERS: Abeer Al-Subaie, Abigail Crisp-Hihn, Sjoert Jansen, Dr Anne Kelly*, Dr Sylvia Nürnberg and Dr Rafik Rizkallah (*Clinical Fellow supervised by Dr Rebecca Cardigan) Platelets are the second most abundant cell in blood and are important in surveying the arterial vessel wall for damage and to initiate repair. A very low number, or poorly functioning platelets may lead to bleeding (see Rebecca Cardigan page 27 and Simon Stanworth page 22). It is therefore attractive to postulate that having a high platelet mass (count x volume) and functionally active platelets has been evolutionarily advantageous. With today’s sedentary lifestyle having these two characteristics may be less beneficial because both are independent risk factors for stroke and heart attacks. The pro-thrombotic function of platelets varies widely in the healthy population and is strongly heritable, as are platelet count and volume. The principal purpose of our research is to identify sequence variants that regulate the platelet functional response to activation. To support this endeavour and to provide well-characterised donors for the Platelet Responsiveness and Outcome from Platelet Transfusion (PROMPT) study (see Simon Stanworth, page 22) the Cambridge Platelet Function Cohort was expanded from 500 to 1,000 donors. The functional response of their platelets upon activation with adenosine 5’-diphosphate or both the collagen mimetic CRP-XL and the membrane expression levels of both collagen receptors (glycoprotein VI and α2 β1 integrin) and the fibrinogen receptor (α1b β3 integrin) were measured by flow cytometry. Platelet RNA samples from donors representing the full range of functional responses were applied to whole-genome expression arrays, and analysis of this microarray data identified 63 transcript levels that correlated with variation in platelet functional response. We wished to determine whether the corresponding genes were important regulators of thrombus formation. COMMD7 and LRRFIP1 were selected for further study based on the observation that common sequence variants in both loci seemed to be associated with the risk of heart attacks in 4,235 cases of premature myocardial infarction compared with 6,379 controls. A zebrafish model of arterial thrombus formation was developed and silencing of both commd7 and lrrfip1 genes showed reduced thrombus size upon laser-wounding of the vessel wall identifying both proteins as novel positive regulators of thrombus formation. RECENT PUBLICATIONS Goodall AH, Burns, P Salles I, et al, (2010). Transcription profiling in human platelets reveals LRRFIP1 as a novel protein regulating platelet function. Blood. 116:4646-56 Soranzo N, Rendon A, Gieger C, et al, (2009). A novel variant on chromosome 7q22.3 associated with mean platelet volume, counts, and function. Blood. 113:3831-7 Jones CI, Garner SF, Moraes LA, et al, (2009). PECAM-1 expression and activity negatively regulate multiple platelet signalling pathways. FEBS Lett, 583, 3618-3624 Peter L, Brieu N, Jansen S, et al, (2012). Automatic segmentation and tracking of thrombus formation within in vitro microscopic video sequences. Proceedings of the International Symposium on Biomedical Imaging (in press) Group webpage http://www.haem.cam.ac.uk In order to study how dynamic thrombus formation differs in human blood samples we have subsequently established a novel microscope based image processing method. The Platelet Function Cohort has also been used for in silico association studies for other genes identified by the Genome Wide Association Scan (GWAS) for platelet count and volume. This revealed that common sequence variation at Chromosome 7q22.3 exerts not only an effect on the volume of platelets but also on their function. Contribution to patient and donor care or service development The Cambridge Platelet Function Cohort is an international reference for platelet function variation. This will become important for care of patients after a heart attack or an angioplasty. These patients receive two or three platelet inhibitors to prevent thrombus formation, but this is associated with a risk of severe bleeding. It is hoped future treatment with anti-platelet drugs will be more precise and be informed by knowledge of the patient’s platelet function status. Whether platelet concentrates prepared from donors with highly active platelets are clinically less effective is being addressed in the PROMPT study (see page 22). Small and large thrombi may be visualized by microscopy. Video analysis enables the start and growth of individual thrombi to be measured over time, as shown by the different coloured lines in the graph. Research and Development Triennial Report 2009-12 41 Theme 1 5 Platelet biology and genomics In Vitro production of platelets for transfusion Dr Cedric Ghevaert [email protected] CONTRIBUTING TEAM MEMBERS: Dr Thomas Moreau and Dr Meera Arumugam Each year the NHSBT produces a quarter of a million of platelet concentrates for transfusion to patients who would otherwise develop severe bleeding without blood product support as a consequence of cancer therapy, trauma or surgery. Fifteen thousand of these units have to be sourced from specially matched donors for patients who are refractory to the standard platelet concentrates. This represents a significant logistical and financial burden for the NHSBT and the NHS as a whole. My group is concentrating its effort on producing platelets and megakaryocytes (the cell in the bone marrow from which platelets are made) from stem cells. Our goal in the long term is to establish banks of stem cells and a production method for platelets, which would cover over 80% of the matched platelet demand in the UK. Over the last two years we have worked on an efficient and novel way to promote megakaryocyte growth from stem cells and have now reached a point where we obtain reliably large numbers of megakaryocytes for validation and pre-clinical testing in conditions that are compatible with the necessary standards for human therapeutic products. Figure 1. Megakaryocytes grown in vitro from induced pluripotent stem cells. The morphology of the cells with large amount of cytoplasm and, in some cases, multiple nuclei in one cell is entirely consistent with the megakaryocytes found in the bone marrow. Our approach is based on the forward programming of the stem cells towards megakaryocytes by the exogenous expression of proteins that are key regulators of megakaryocyte growth called ‘transcription factors’. Transcription factors are numerous and form networks of association that control whether a gene is ‘on’ or ‘off’. Through genetic studies, basic research of transcription factors binding to genes in megakaryocytes and comparison of transcription factors at play in stem cells and megakaryocytes we identified key proteins that are able to make the switch from stem cells to megakaryocytes. This discovery has now been patented (GB1210857.7). Alongside this work, we have developed three-dimensional scaffolds in collaboration with engineers from the University of Cambridge onto which we will seed the stem cells in a bid to scale-up production in bioreactors and provide sufficient numbers of cells for clinical applications. One crucial aspect of the scaffold is that it can be modified so as to give a signal for the megakaryocytes to produce platelets efficiently that can be harvested for transfusion into patients. Both lines of research are groundbreaking and integral to our goal to develop an alternative way to generate platelets that are safe, efficient and matched to patients which will translate in adequate prevention of bleeding, reduced hospital stay and gain in quality of life. Contribution to patient and donor care or service development The provision of platelets, especially HLA-matched platelets for patient refractory to standard platelet pools is a huge logistical and financial burden to the NHS. We are seeking an alternative way to provide platelets for transfusion by producing them in vitro using a source of stem cells that have unlimited maintenance and expansion potential called human pluripotent stem cells. Although still in the early phase, our research shows that this approach has the potential in the future to provide a blood product that is safe, efficient and addresses some of the immunological issues around platelet transfusion by providing matched products for patients who are refractory to the standard donor-derived platelets. 42 Research and Development Triennial Report 2009-12 Figure 2. Scanning electron microscopy image of a 3D collagen scaffold showing the porous structure and niche into which the megakaryocyte can grow whilst allowing circulation of nutrient and the collection of platelets shed by the mature megakaryocytes. Theme Platelet biology and genomics 1 5 A study of the HPA-1a Antibody Response in Neonatal Alloimmune Thrombocytopenia (NAIT) Professor David Roberts [email protected] CONTRIBUTING TEAM MEMBER: David Allen Neonatal alloimmune thrombocytopenia (NAIT) occurs as a result of maternal antibodies against proteins present on fetal platelets. These antibodies can result in the destruction of the fetal or neonatal platelets and bleeding which may include brain or intracranial haemorrhage so leading to disability or death. Current tests for these antibodies do not reliably predict the severity of disease making screening and treatment of affected women and children difficult. We have studied the nature and characteristics of antibodies in this condition and aim to devise better tests to prevent and manage this condition. The most frequently encountered antibody is known as HPA-1a and it recognises a particular form of a protein known as β3. This protein is found on platelets as part of a larger protein complex (αIIbβ3) and tests to detect HPA 1a antibody use this protein as a target antigen. We have investigated whether assays used in the laboratory to detect HPA–1a antibodies actually cause changes to the conformation of the protein and prevent their detection. We have also studied the use of these different forms αIIbβ3 can improve the sensitivity and predictive ability of the test. We have shown that changes on the αIIbβ3 protein may be brought about by the type of anticoagulant used for collection of maternal blood and also by reagents used in diagnostic assays. We have also shown potential structural differences of this integrin under different assays conditions. All of these findings can affect how well the maternal antibodies are detected and also how much maternal antibody appears to be present. RECENT PUBLICATIONS Allen DL, Abrahamsson S, Murphy MF and Roberts DJ, (2012). Human platelet antigen 1a epitopes are dependent on the cation-regulated conformation of integrin alpha(IIb) beta(3) (GPIIb/IIIa). J. Immunol Methods, 375, 166-175 Knight M, Pierce M, Allen D, Kurinczuk JJ, Spark P, Roberts DJ and Murphy MF, (2011). The incidence and outcomes of fetomaternal alloimmune thrombocytopenia: a UK national study using three data sources. Br J Haematol, 152, 460-468 Metcalfe P, Allen D, Kekomaki R, Kaplan C, De HM and Ouwehand WH, (2009). An International Reference Reagent (minimum sensitivity) for the detection of anti-human platelet antigen 1a. Vox Sang, 96, 146-152 We now need to evaluate whether new assays, developed as a result of these findings, are better able to detect and measure maternal antibodies and are therefore better able to predict NAIT. Ideally this should be done in a large prospective study where sequential samples have been taken from a large cohort of HPA-1b1b women during their pregnancy and where there is data on the clinical outcome and platelet count in neonates. We would now like to test our modified assay in parallel with existing and other novel techniques, including the recombinant β3 proteins to determine the relative sensitivity and specificity of these assays. We could then take the most suitable assay forward into a large scale trial of screening for HPA-1a antibodies. We would hope such a trial would define the value of antenatal screening to predict which children might be affected and provide treatment before they become severely affected. Contribution to patient and donor care Our findings provide possible explanations for the reported insensitivity of current tests for platelet antibodies and why it has not been possible to predict with certainty which children will be affected by NAIT. We have shown that key reagents used in diagnostic tests have an impact on antibody detection and some of these techniques have been adopted by laboratories around the world that provide these diagnostic services. Future work will define how a new test for HPA-1a antibodies can improve the prediction of severe disease. (A) Molecular models of αIIbβ3 protein. The HPA-1a epitope lies within the circled area and is shaded black. The lower figure is a magnified view of the circled area. Research and Development Triennial Report 2009-12 43 Theme 1 5 Platelet biology and genomics Recombinant antibody for treatment of fetomaternal alloimmune thrombocytopenia Dr Cedric Ghevaert [email protected] CONTRIBUTING TEAM MEMBERS: Louise Hawkins, Nina Herbert, Paul Lloyd-Evans, Phil Cookson and Dr Lorna Williamson In the UK, one in 350 pregnant women will develop antibodies against their baby’s platelets. One in three babies will see their platelet count drop significantly as a result of these maternal antibodies crossing the placenta into the baby’s circulation and binding to the baby’s platelets. As a consequence of this drop in platelet count the babies can develop severe bleeding, including in the brain, which can lead to life-long disability or even death in the womb. Antenatal therapy is usually with a combination of immunosupressors and intravenous immunoglobulins taken by the pregnant mother. Treatment at the time of birth is with transfusion of platelets that do not carry the antigen to which the maternal antibodies bind. Despite therapy some intracranial bleeds still happen and side effects of the treatment itself for the pregnant mother should also be considered. We have taken the approach of developing an antibody that is similar to the mother’s and therefore can compete with maternal antibodies for binding to the baby’s platelets. However we have modified our therapeutic antibody so that it does not activate the destruction of the platelets it is bound to. In essence our new compound would prevent platelet destruction in the baby by the maternal antibodies with the added benefit of being generated in the laboratory and therefore a much better side-effect profile than current treatments. ‘First-in-man’ study Previous work in the laboratory confirmed the validity of our approach. We have now carried out a ‘first-in-man’ study in healthy volunteers. These volunteers were recruited from an NHSBT donor panels known to match the babies’ blood group. A blood sample taken from the volunteer allowed us to generate platelets that were coated with either a destructive antibody (similar to the maternal antibody) or with our new compound. These platelets were re-injected into our volunteers and their lifespan in the circulation was assessed by means of a radioactive label attached to the platelets. We found that survival of platelets coated with the therapeutic antibody was far superior to the survival of platelets coated with the destructive one and was in fact as good as platelets not coated with any antibody at all. We are now therefore looking at the possibility of taking this potential treatment into clinical trials in collaboration with other researchers across Europe and partners in the pharmaceutical industry. Contribution to patient and donor care or service development RECENT PUBLICATIONS Ghevaert C, Wilcox DA, Fang J, Armour KL, Clark MR, Ouwehand WH, et al. Developing recombinant HPA-1a-specific antibodies with abrogated Fcgamma receptor binding for the treatment of fetomaternal alloimmune thrombocytopenia. The Journal of clinical investigation. 2008 Aug;118(8):2929-38 Ghevaert C, Campbell K, Walton J, Smith GA, Allen D, Williamson LM, et al. Management and outcome of 200 cases of fetomaternal alloimmune thrombocytopenia. Transfusion. 2007 May;47(5):901-10 Ghevaert C, Rankin A, Huiskes E, Porcelijn L, Javela K, Kekomaki R, et al. Alloantibodies against low-frequency human platelet antigens do not account for a significant proportion of cases of fetomaternal alloimmune thrombocytopenia: evidence from 1,054 cases. Transfusion. 2009 Jun 4. 2009 49;2084-9 Ghevaert C, Campbell K, Stafford P, Metcalfe P, Casbard A, Smith GA, et al. HPA-1a antibody potency and bioactivity do not predict severity of fetomaternal alloimmune thrombocytopenia. Transfusion. 2007 Jul;47(7):1296-305 Group webpage http://www.haem.cam.ac.uk/staff/ senior-staff/cedric-ghevaert Fetomaternal alloimmune thrombocytopenia (FMAIT) can be a devastating disease leading to either death of fetuses in the womb or to bleeding in the baby’s brain and long-term disability. The NHSBT provides support for hospitals dealing with cases with FMAIT in two ways: 1. Investigating for the presence of antibodies in the maternal blood responsible for FMAIT and 2. Providing antigen-negative platelet support for transfusion to the affected fetuses and neonates. The development and ‘first-in-man’ trial of a new therapeutic compound to prevent destruction of the platelets will potentially change completely our treatment approach for this disease and the logistics of providing matched platelets for treatment of affected babies. Figure 1. We have produced a therapeutic antibody (in green) that can be administered to a pregnant mother who has herself formed antibodies against her unborn baby’s platelets (in red). The therapeutic antibody can be given by injection to the mum, crosses the placenta and outcompetes the maternal antibodies for binding to the baby’s platelets. Once bound to the platelets, the therapeutic antibody blocks platelet destruction by the effector cells, thereby reducing the risk of bleeding in the baby. 44 Research and Development Triennial Report 2009-12 Theme Organ donation and transplantation 1 6 Quality in organ donation (QUOD) Professor Rutger J Ploeg Principal Investigators: John Dark, Peter Friend, Anthony Gordon, Gerlinde Mandersloot, Wayel Jassem, Lorna Marson and Christopher Watson Expert Advisors: Christian Brailsford, David Collett and Sue Fuggle Research Students: Zeeshan Akhtar, Maria Kaisar and Rachel Thomas One of the biggest challenges facing the transplant community today is the lack of good quality organs. Facing the prospect of a widening deficit between organ supply and demand in the next ten years, there becomes an urgent need to develop novel strategies to protect, resuscitate and repair donor organs. And thus improve organ quality and the outcomes for transplant recipients. Addressing this quality deficit is particularly important for organs obtained from extended criteria donors (older brain dead donors with additional co-morbidities) and donors after circulatory arrest. The QUOD is a national NHSBT funded programme led by Professor Rutger J Ploeg, Professor of Transplant Biology at the University of Oxford and Consultant Surgeon at the Oxford University Hospital OUH NHS Trust. The key aims of this initiative are: • to increase the number and quality of organs procured from brain dead donors and donors after cardiac death, by optimising donor management, resuscitating and preserving high-risk donor organs • to make previously unusable organs transplantable and increase the ‘donor pool’ • to identify pathways of injury and apply targeted interventions to repair donor organ injury • to translate validated experimental methods and technologies into clinical use and best practice protocols, and • to identify biomarkers and functional parameters that predict outcome following transplantation. RECENT PUBLICATIONS Moers C, Pirenne J, Paul A, Ploeg RJ. Machine perfusion or cold storage in deceased-donor kidney transplantation. N Engl J Med. 2012, 366(8):770-1 Damman J, Seelen MA, Moers C, et al. Systemic Complement Activation in Deceased Donors Is Associated With Acute Rejection After Renal Transplantation in the Recipient. Transplantation, 2011, 92 (2): 163-169 Jochmans I, Moers C, Smits JM, et al. The prognostic value of renal resistance during hypothermic machine perfusion of deceased donor kidneys. Am J Transplant. 2011, 11(10), 2214-20 Nijboer WN, Schuurs TA, Damman J, et al. Kidney injury molecule-1 is an early noninvasive indicator for donor brain death-induced injury prior to kidney transplantation. Am J Transplant. 2009, 9 (8):1752-9 We aim to achieve these key goals by forming a national Consortium consisting of experts from the intensive care and transplant units from across the United Kingdom in conjunction with NHSBT. We will collect information from appropriately consented donors, including biological specimens, analyse samples and correlate this to outcomes following transplantation. By doing this we will identify novel markers that can be used to predict the function and outcomes of transplantation, but also improve our understanding of the underlying pathways of donor organ injury. The Consortium will create a platform for trialling new therapeutic strategies aimed at resuscitating and repairing damaged donor organs to improve immediate function and increase long-term survival. Contribution to patient and donor care or service development By targeting organ injury and improving organ quality we will increase the absolute number of life saving organs available for transplantation. In addition, better short and long-term outcomes after transplantation will improve organ and patient survival, reduce postoperative complications and the need for re-transplantation. Research and Development Triennial Report 2009-12 45 Theme 1 6 Organ donation and transplantation Impact of donor factors on transplant outcome Professor Dave Collett [email protected] CONTRIBUTING TEAM MEMBERS: Rachel Johnson, James Neuberger, Dominic Summers, Rhiannon Taylor and Helen Thomas The shortage of donor organs for transplantation means that surgeons need to consider using organs that are higher risk or sub optimal. Recent work in this area has looked at using kidneys from ‘donation after circulatory-death’ (DCD) donors, and lungs from donors with a positive smoking history. RECENT PUBLICATIONS Ausania F, White SA, Pocock P, Manas DM. Kidney Damage During Organ Recovery in Donation After Circulatory Death Donors: Data From UK National Transplant Database. American Journal of Transplantation 2012; 12: 932-936 Kidneys from DCD donors Until the last ten years, the vast majority of kidneys for transplantation in the UK came from heart-beating, brain-dead, donors. However, brain-death is quite a rare event in the UK (1,176 cases in 2011), and so even if all these donors were fit enough to donate and all their families consented to donation, there would still be too few organs available for the 7,000 patients waiting. One solution to this shortage has been the use of DCD donors, in which death of the donor is declared after cardio-respiratory arrest, following the controlled withdrawal of treatment in patients who have suffered catastrophic injuries. Bonser RS, Taylor R, Collett D, Thomas HL, Dark JH and Neuberger J. The smoking donor – benefit or hazard to the potential lung recipient? Lancet 2012; Early Online Publication, 29 May 2012 There have been concerns about using organs from this source, as the organs will undergo a prolonged period with an inadequate blood supply, potentially causing them permanent damage. We have been able to show, for the first time, that kidneys from DCD donors work as well as kidneys from brain-dead donors in the longer term and that kidneys from older DCD donors are no worse than kidneys from older brain-dead donors. In addition, we have found that DCD donor kidneys are more susceptible to the damage incurred during cold storage of the organ prior to transplantation. This has implications for the allocation of such kidneys, in that long ischemic times associated with transporting the organ from the retrieval to implantation centre must be avoided. Summers DM, Johnson RJ, Allen J, Fuggle SV, Collett D, Watson CJ, Bradley JA. Analysis of factors that determine outcome following transplantation with kidneys donated after cardiac death in the UK. Lancet 2010; 376: 13031311 Summers DM, Counter C, Johnson RJ, Murphy PG, Neuberger JM, Bradley JA. Is the Increase in DCD Organ Donors in the United Kingdom Contributing to a Decline in DBD Donors? Transplantation 2010; 90:1506-1510 Lungs from smoking donors The shortage of lungs for transplantation means that around 40% of lungs come from donors with positive smoking history (PSH). However, recipients of such lungs have a significantly worse survival after transplantation (see chart). In view of this, an important question facing the patient is whether to accept an offer of lungs from a PSH donor or wait for lungs from a non-smoker. Using a novel statistical analysis, we showed that patients Articles receiving lungs from donors with positive smoking histories had a longer survival time following registration than did those who remained on the waiting list. The continued use of PSH donor lungs is therefore warranted. Contribution to patient and donor care or service development 46 had slightly higher body-mass indices than those who received lungs from donors with negative smoking histories; other characteristics were similar between groups (table 2). Use rates of lungs from donors with positive smoking histories did not differ significantly between transplantation centres (table 2). Unadjusted Kaplan-Meier estimates of post-transplantation survival showed inferior survival by donor history of smoking (figure 2A); median post-transplantation survival time was 4·9 years (95% CI 4·4–5·5) for transplants from donors with positive smoking histories Research Development Triennial Reportfrom 2009-12 and and 6·5 years (5·9–7·2) for transplants donors with negative smoking histories. Survival was already inferior 30 and 90 days after transplantation (table 2). The Survival (%) Our findings have reassured transplant clinicians and recipients that organs from DCD donors can safely be used, increasing the number of kidneys available for patients on the waiting list. We have also been able to tailor the national kidney allocation policy so that thepositive storagesmoking time forhistories these kidneys is minimised with had similar clinical and A donor–recipient matching characteristics donors with to optimise transplant outcome. In regard toto lung 100 NSH donor negative smoking histories, exception small transplantation, although lungswith fromthe PSH donorsofare PSH donor but significant differences in cytomegalovirus matching associated with a poorer outcome, an organ selection 80 and cause death such (tabledonors 1). We noted no significant policystatus that uses lungsoffrom improves overall differences in donor’s age, oxygenation, size matching, survival of patients registered for lung transplantation, and 60 and ischaemic time (table 1). Recipients of lungs from shoulddonors be continued. with positive smoking histories were older and 40 1 year NSH donor 81·3 (78·1–84·1) PSH donor 74·6 (70·4–78·3) Log-rank p value 0·006 20 0 Number at risk NSH donor PSH donor 3 years 67·2 (63·2–70·8) 55·7 (50·7–60·4) 0·0002 5 years 57·4 (53·0–61·6) 49·2 (43·9–54·3) 0·002 0 1 2 3 4 5 6 709 502 470 301 370 216 294 169 239 144 189 108 137 88 B 100 80 Theme Organ donation and transplantation 1 6 Allocation of organs for transplantation Rachel Johnson [email protected] CONTRIBUTING TEAM MEMBERS: Joanne Allen, Kerri Barber, Dave Collett, Alex Hudson, David Manlove, Gregg O’Malley and John O’Neil Living donor kidney transplantation for incompatible donor-recipient pairs RECENT PUBLICATIONS The shortage of organs for transplantation means that organ allocation schemes are needed to ensure that UK patients have equity of access to organs from deceased donors and that opportunities for exchanging living donor kidneys are maximised. Recent work has focused on novel arrangements for allocating kidneys, the allocation of pancreases and islets, and approaches to the allocation of livers. Johnson RJ, Allen JE, Fuggle SV, Bradley JA, Rudge CJ. Early Experience of Paired Living Kidney Donation in the United Kingdom. Transplantation 2008; 86:1672-1677 Preparing a DCD donor kidney for transplantation A potential living kidney donor and his/her intended recipient are biologically incompatible in about one-third of potential donorrecipient pairs. In this situation, a number of transplant options may be possible, including kidneypaired exchange (KPE), whereby incompatible pairs exchange donor kidneys to circumvent incompatibility, waiting for a deceased donor transplant, or proceeding with an incompatible transplant with appropriate treatment. A study with the University of Glasgow examines possibilities for extending living donor kidney transplantation through KPE, and to identify optimal strategies for transplantation for immunologically incompatible donor-recipient pairs, based on the nature of the incompatibility between donor and recipient. This enables a more effective and informed pathway to transplantation in terms of waiting time, transplant outcome and cost. Johnson RJ, Fuggle SV, Mumford L, Bradley JA, Forsythe JLR, Rudge CJ. A new UK 2006 national kidney allocation scheme for deceased heart beating donor kidneys. Transplantation 2010; 89: 387-394 Watson CJE, Johnson RJ, Birch R, Collett D, Bradley JA. A simplified donor risk index for predicting outcome after deceased donor kidney transplantation. Transplantation 2012; 93: 314-318 Barber K, Pioli S, Blackwell J, Collett D, Neuberger J, Gimson A. Elective liver transplant list mortality: development of a United Kingdom end-stage liver disease score. Transplantation 2011; 92(4):469-76 Allocation of pancreas and islets A new National Pancreas Allocation Scheme was introduced on 1 December 2010. Patients are prioritised according to a points system based on a range of clinical factors. A computer program calculates a score for every potentially suitable patient on the national active transplant list and the pancreas is allocated preferentially to the patient with the most points. Pancreases from donors after brain death and donors after circulatory death are allocated through this scheme. Patients listed for a vascularised pancreas or islet transplant are prioritised through one combined national transplant list. The new scheme aims to reduce the incidence of long waiting patients and to improve equity in access to transplant irrespective of where in the UK each patient resides, without adversely affecting graft survival. Allocation of livers At present, livers for elective transplantation are allocated to transplant centres, which then decide which patient receives the organ. A number of alternative schemes have been developed that prioritise patients according to need (liver offered to sickest patient), utility (liver offered to maximise life years of graft) and benefit (liver offered to patient predicted to gain most life years following transplant). Although there are limitations in the data available, our results suggest that an allocation system based on need or benefit is comparable to the current scheme. Contribution to patient and donor care or service development Up to the end of March 2012, about 150 patients had been transplanted through the kidney paired exchange programme. The introduction of a national pancreas allocation scheme has allowed more patients to benefit from islet transplantation without having an adverse effect on the pancreas transplant programme. Research and Development Triennial Report 2009-12 47 Theme 1 6 Organ donation and transplantation MALIGNANCY FOLLOWING TRANSPLANTATION Cancer in transplant recipients types, so that for example, the SIRs tend to be Figure 3: Examples of malignancies in transplant recipients. higher for lung transplant recipients. The incidence of some cancers, and particularly NMSC, Professor James Neuberger may be underestimated because of incomplete [email protected] reporting to the cancer registries. These results suggest that there is a case for regularly screening for NMSC, lip and anal cancer, but no need for additional surveillance of breast or cervical CONTRIBUTING TEAM MEMBERS: Joanne Allen, Kerri Barber, Dave Collett, Alex Hudson, David Manlove, cancer1. Gregg O’Malley and John O’Neil Different cancers exhibit different SIRs over time1. To illustrate this, Figures 1 and 2 show Thepatterns occurrence a recognised adverse event following organ the in of themalignancy SIRs overistime following transplantation.for OurNMSC first national studyrespectof malignancy linked data from British transplantation and PTLD, transplant recipients to information on cancer ively. The SIR for NMSC increases steadily overregistrations obtained from the regional cancer registries in England and the national registries of Scotland time in recipients of a kidney or cardiothoracic organ, but for recipients, the SIR has and Wales. Theliver linkage allowed calculation of athe time to first registration of a much lower following value andsolid reaches maximum malignancy organ its transplantation. within two years. In contrast, the SIR for PTLD non-melanoma skin cancer inOverall, kidney,incidence liver andoflung recipients peaks at one(NMSC) was found to be 14 times that of the general population, while thetwo overall incidence rate for all other cancers is just year after transplantation and at years for heart transplant recipients. Inpopulation. terms of absolute over twice that of the general Many forms of cancer have a much higher risk, malignancy incidence in kidney recipients incidence in transplant recipients than the general population, especially cancer of the islip, low in younger lymphoproliferative recipient age groups, and post-transplant disease, cancer of the oral cavity and anal cancer. increases age; it is also males There arewith also differences in thegreater patternfor of incidence between the different transplant than Examples of incidence post-transplant types,females. so that, for example, the of NMSC is lower for liver transplant recipients malignancies are shown in Figure 3. (see chart below). Standardised incidence ratio 25 Kidney Liver Heart Lung 20 15 10 5 0 0 3 6 9 Years since transplantation 12 15 Figure 1: Changes in the SIR over time since transplantation for NMSC in recipients of different organs. The increased risk of development of(1)a An malignancy inshowing a transplanted MR of the brain a glioblastoma. patient is mainly due to the use of immunosuppression, but there is also the possibility of transmission of a cancer from a donor. Outcome for the recipient is poor when such transmission occurs, with a high chance of graft loss and death. Because of this, donors with a known history of malignancy are not generally considered for transplantation. RECENT PUBLICATIONS Collett D, Mumford L, Banner NR, Neuberger J, Watson CJE. Comparison of the incidence of malignancy in recipients of different types of organ: a UK registry audit. American Journal of Transplantation 2010;10: 1889–1896 Watson CJE, Roberts R, Wright KA, Greenberg DA, Rous BA, Brown CH, Counter C, Collett D, Bradley JA. How safe is it to transplant organs from deceased donors with primary intracranial malignancy? An analysis of UK registry data. American Journal of Transplantation 2010; 10: 1437–44 Warrens AN, Birch R, Collett D, Daraktchiev M, Dark JH, Galea G, Gronow K, Neuberger J, Hilton D, Whittle IR, Watson CJE. Advising potential recipients on the use of organs from donors with primary central nervous system tumours. Transplantation 2012; 93(4): 348-353 Estimating risk of transmission 60 Kidney Standardised incidence ratio While national and international guidelines Liver have been developed, these usually have a very weak evidence base and our 50 data suggest that, for brain cancers own at least, exclusion of some donors will actually increase patient mortality because Heart Lung of the high risk of death awaiting a transplant. To estimate the risk of transmission, recipients with donor-transmitted cancer 40 were identified from the UK Transplant Registry and a database search at transplant centres. 30 (3) A with colon with multiple ulcerated areaswith of PTLD in a patient 8 years after aoccurred kidney transplant. We found 15 out of 30,765 transplant recipients (0.05%) transmitted cancer transmission having from 13 20 out of 14,986 donors (0.09%). Donors aged 45 years or more were nine times more likely to result in cancer transmission theproportion type of immunosuppression, but this than donors aged less than 45 years. This is importantand as the of older donors is increasing in the UK, and now 10 be the subject of in further work. more than half of all organ donors are aged 50 years will or more. Furthermore, none of these cases was the presence of 0 tumour known before transplantation. 0 3 6 9 12 15 Years since transplantation TRANSMISSION Contribution to patient and donor care or service developmentOF MALIGNANCY Figure 2: Changes in the SIR over time since transplantation PTLD in recipientshelps of different organs. patient The development a malignancy a transOur study onfor cancer incidence to identify groups and cancer of types which shouldinform part of a cancer planted patient ispatients mainlyondue use of surveillance programme, and provide data for counselling pre-transplant the to riskthe of malignancy. The precise risk immunosuppression, butdata there is also theis a rare event. Based on limited there no to evidence of transmission of adata, cancer fromwas donor recipient is unknown, but the available suggest that this of an association between cancer incidence possibility of transmission of a cancer from a This small risk of tumour transmission needs to be balanced against the likely mortality for potential recipients who remain on the transplant list. Patients can now be counselled more accurately on the benefits as well as the risks of transplantation. 4 48 Research and Development Triennial Report 2009-12 British Journal of Transplantation Theme Stem cells and immunotherapies 1 7 Immunogenetic markers in transfusion and transplantation Dr Cristina Navarrete and Dr John Girdlestone [email protected], [email protected], [email protected], [email protected] Dr Chistina Navarrete Dr John Girdlestone CONTRIBUTING TEAM MEMBERS: Sandra Cardoso, Winnie Chong, Lisa Creary, Delordson Kallon and Alina Lemnrau Appropriate matching between donor and recipient is critical for the safe and effective transfusion of blood, and for the transplantation of organs or haematopoietic stem cells. We are dedicated to developing new and more efficient strategies and techniques for analysing the genetic markers that contribute to optimal matching and successful patient clinical outcomes including alleles of the HLA, HPA and HNA antigenic systems. In addition, we are also investigating the role of HLA ligand/Killer Immunoglobulin Receptor (KIR) pairing in the outcome of UCB stem cell transplants. The NHS Cord Blood Bank has now issued nearly 400 units for transplantation worldwide. We are performing a retrospective analysis of donor and recipient HLA alleles to determine if clinical outcomes are improved by high resolution (HR) matching for class I (HLA-A, -B, -C) and class II (HLA-DRB1, -DQB1) loci compared to the current method of matching at low/mid resolution at class I loci and HR at -DRB1. HLA ligand and KIR combinations in these transplants are also being determined to see if mis-matching conveys a benefit in cord blood transplants for leukaemia patients and to develop methods for more efficient, cost-effective typing of HLA, HPA and HNA alleles. While matching of individual HLA alleles is known to be important for clinical transplantation outcomes, there is increasing evidence that genes linked on the same chromosomal region (a haplotype) can also have an effect. To capture this information, we have developed a method using HLA TagSNPs to identify the three most common Caucasoid haplotypes. RECENT PUBLICATIONS Brown CJ, Navarrete CV. The clinical relevance of the HLA system in blood transfusion. Vox Sang 2011; 101: 93-105 Hollenbach JA, et al. Worldwide variation in the KIR loci and further evidence for the co-evolution of KIR and HLA. Tissue Antigens. 2010; 76:9-17 Chong W, et al. Detection of human platelet antigen-1a alloantibodies in cases of fetomaternal alloimmune thrombocytopenia using recombinant β3 integrin fragments coupled to fluorescently labelled beads. Transfusion. 2011;51:1261-70 Alina Alina Lemnrau Identification of Human Leukocyt Antigens (HLA) haplotypes using tagSNPS. PhD Thesis, UCL. 2012 Patients requiring repeated transfusion of platelets for clotting disorders can develop antibodies against foreign HLA as well as HPA alleles, making it difficult to find a compatible products when needed. We are also developing new approaches using molecular and bioinformatic tools to define HLA epitopes (Eplets) for the provision of compatible products for these patients. Antibodies to HPA can cause serious complications during pregnancy in addition to poor responses in patients requiring platelet transfusions, and in collaboration with other NHSBT R&D laboratories we have developed a multiplexed method employing recombinant proteins for the screening of common HPA antibodies. Contribution to patient and donor care or service development To identify the most appropriate level of matching for selecting donors that can provide the best clinical outcome of transplantation and transfusion, and to develop methods for more efficient, cost-effective typing of HLA, HPA and HNA alleles. The identification of more cost effective and clinically relevant diagnostic tests for HLA and other genetic markers such as SNPs are being investigated for their roles in transplantation and transfusion. The identification of HLA tagSNPs that identify common HLA haplotypes led to the development of a multiplex assay using a platform that is in standard use in the Histocompatibility and Immunogenetics (H&I). This approach has now been transferred to the Colindale-based H&I Service Development group for translation to the NHSBT H&I Service. Prediction of permissible HLA mismatches. Prediction of permissible HLA mis-matches. The original MatchMaker program of Duqesnoy used contiguous triplets of amino acids to compare HLA alleles, but the newest version looks at spatially adjacent residues that more closely represent antibody-binding sites. Adapted from: Kostyu et al. Human Immunology 57, 1-18, 1997 The original MatchMaker program of Duqesnoy used contiguous triplets of amino acids to compare HLA alleles, but the newest version looks at spatially adjacent residues that more closely represent antibody-binding sites. Adapted from: Kostyu et al. Human Immunology 57, 1-18, 1997 In order to provide the best possible matching between donors and patients, we develop DNA and protein assays for mult-allelic genetic systems. In order to provide the best possible matching between donors and patients, we develop DNA and protein assays for multi-allelic genetic systems. Research and Development Triennial Report 2009-12 49 Theme 1 7 Stem cells and immunotherapies Immunoregulatory properties of cells derived from umbilical cord and cord blood Dr Cristina Navarrete and Dr John Girdlestone [email protected], [email protected], [email protected], [email protected] Dr Chistina Navarrete Dr John Girdlestone CONTRIBUTING TEAM MEMBERS: Antony Cutler, Sima Hirani and Meera Raymond Umbilical cord blood (UCB) is increasingly being used as an alternative to bone marrow or mobilised peripheral blood as a source of stem cells for reconstitution of the haematopoietic and immune systems of patients receiving treatment for leukaemias or non-malignant diseases. The use of UCB is associated with lower rates of a life-threatening complication, acute Graft versus Host Disease (aGvHD), compared to that seen when stem cells from adult donors are used. The main aims of our group are to understand the unique characteristics of immune cells in UCB that could influence this outcome, and also to determine how the immunosuppressive properties of Mesenchymal Stromal Cells (MSC) derived from the umbilical cord (UC) itself may be exploited to treat aGvHD. It has been shown that although the proportion of regulatory T-cells (T-regs) are similar in adult and cord blood CD4 compartments, there is a very low level of activated, CD25+ T-effector cells in UCB, such that the ratio of T-regs to T-effector is much higher in UCB. The relative numbers and/or activity of T regulatory cells (T-reg) may also contribute to the reduced GVHD seen following UCB transplantation. On the other hand MSC have been used as feeder layers for the expansion of CB haematopoietic stem cells, and we and other groups have shown that co-culture of CD4+ lymphocytes with MSC can not only maintain but also induce, T-reg numbers during lymphocyte expansion. If patients suffering from aGvHD fail to respond to steroids then their treatment options are limited. A number of groups have reported favourable responses upon treatment with MSC, and clinical trials are now underway around the world to determine their efficacy. The majority of these trials are testing MSC derived from bone marrow, but we and other researchers have shown that the UC can serve as a less invasive, more convenient source of MSC. We have shown that the UC-derived MSC are capable of inhibiting immune reactions, and demonstrated that monocytes play a crucial role in mediating their suppression of T-cell proliferation. The naive state of immune cells in UCB is thought to contribute to their reduced tendency to cause GvHD. However, immune regeneration is reported to be slower with UCB, which leaves patients at greater risk of life-threatening infections. Clinical trials on the use of UCB are now underway in the UK and we are collaborating with transplant centres to study the immune reconstitution of their recipients in order to understand how best to monitor and understand this process. Haematopoietic stem cell transplantation can be a life-saving treatment, but transplant-related mortality remains a serious problem. Through increased understanding of the parameters that influence the development of aGVHD, stem cell engraftment and immune reconstitution, we have the potential to identify the most appropriate stem cell grafts for achieving successful transplants with minimal side effects. Advances in this area will increase patient survival and quality of life, and reduce demands on healthcare resources. 50 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Girdlestone J, et al. Efficient expansion of mesenchymal stromal cells from umbilical cord under low serum conditions. Cytotherapy 2009;11:738-48 Cutler AJ, et al. Umbilical cord derived mesenchymal stromal cells modulate monocyte function to suppress T-cell proliferation. J Immunol 2010; 185: 6617-6623 Gluckman E, et al. Family-directed umbilical cord blood banking. Haematologica. 2011; 96:1700-1707 Hirani S. The characterisation of human umbilical cord blood regulatory T-cell subsets. PhD Thesis, UCL Feb 2012 Theme Stem cells and immunotherapies 1 7 Immune reconstitution in recipients of UCB is monitored using flow cytometry. Immune reconstitution in recipients of UCB usingNK flow A patient sample (left) contains monocytes (red),isTmonitored (d. blue) and (I. blue) cells, cytometry. A patient sample (left) contains but very few B Cells (green) compared to UCBmonocytes (right). (red), T (d. blue) and NK (l. blue) cells, but very few B Cells (green) compared to UCB (right). Monocytes are required for inhibition of T-Cell proliferation by MSC. Proliferation of T-cells in response to anti-CD3/CD28 (black) is inhibited by MSC (red), but this suppression is blocked upon the of monocytes Monocytes are required forremoval inhibition of T Cell (yellow) but not B cells (blue). proliferation by MSC. Proliferation of T cells in response to anti-CD3/CD28 (black) is inhibited by MSC (red), but this suppression is blocked upon the removal of monocytes (yellow) but not B cells (blue). Expanded CB T-reg are immunosuppressive. Freshly isolated (day 1) CB T-reg (CD25+) are weakly suppressive compared to those fromExpanded adults (AB),CB butTreg become equally potent upon expansion vitro. (day1) are immunosuppressive. Freshlyinisolated CB Treg (CD25+) are weakly suppressive compared to those from adults (AB), but become equally potent upon expansion in vitro. Research and Development Triennial Report 2009-12 51 Theme 1 7 Stem cells and immunotherapies Improving cord blood transplant outcomes by understanding the bone marrow niche Professor Suzanne Watt [email protected] CONTRIBUTING TEAM MEMBERS: B Zhou, Y Zhang, CT Yang, G Tsaknakis, K Pilkington, E Pepperell, E Martin-Rendon, S Lee, C Khoo, S Hale, A French, R Forsey, K Coldwell, C-H Chang, L Carpenter and S Buglass Umbilical cord blood is an important source of blood stem cells for regenerating a normal blood supply following transplantation for diseases such as acute leukaemias. Key challenges include limited stem cell numbers, repair of the damaged bone marrow niche following chemotherapy/radiotherapy and delayed blood cell regeneration within the bone marrow niche when compared to other sources of blood stem cells. This can lead to graft failure and/or to increased susceptibility to bleeding or infections post transplant and hence resultant morbidity and mortality. Enhancing cord blood stem/progenitor cell efficacy before grafting can prevent engraftment delays and improve transplant outcomes, but strategies used can be prohibitively expensive to health providers or may still be in development, and therefore may not be adopted immediately by transplanters. Our particular objectives are to improve the therapeutic use of cord blood stem/ progenitor cells by first understanding how their homing to bone marrow and their self-renewal and development into blood cells are regulated by the bone marrow microenvironmental niche, and then by developing cheaper and affordable methods for the enrichment and expansion of cord blood stem cells which will efficiently ‘take’ after transplantation. In achieving these goals, one of our key successes has been to develop a novel in vitro time-lapse method for assessing trafficking of individual human cord blood stem/progenitor cells towards the key bone marrow attractant, CXCL12. This assay distinguishes between directed homing (chemotaxis) and random movement (chemokinesis) of cord blood stem/progenitor cells, thereby allowing refinement of conditions for pre-transplant manipulation of these stem/progenitor cells so that their homing abilities can be assessed and optimised prior to transplant. This assay represents an important advance when analysing rare stem/progenitor cell populations from or for use in patients. We are also using different technologies, including cell reprogramming, scaffolds and bioreactors combined with novel factors and niche elements, and non coding RNAs or small molecules, to expand cord blood stem/progenitor cell numbers, to repair the damaged niche or to modulate interactions of cells within the niche. Interestingly, we have identified candidate co-receptors for the CXCL12 receptor, CXCR4, which may influence stem cell homing, reprogrammed CD34+ cord blood and other cells which can generate haemopoietic and vascular lineages, and we were the first to demonstrate that a clonal bone marrow MSC line could promote both haemopoiesis and vasculogenesis. Such MSC subsets may thus have a dual regulatory role in promoting haematological recovery in the transplant setting. These developments will contribute substantially to achieving the desired outcomes. 52 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Zhou B*, Tsaknakis G*, Coldwell KE, Khoo CP, Roubelakis MG, Chang CH, Pepperell E, Watt SM. A novel function for the haemopoietic supportive murine bone marrow MS-5 mesenchymal stromal cell line in promoting human vasculogenesis and angiogenesis. Brit J Haematol. 2012; 157(3): 299-311 (*joint 1st authors) Pepperell EE, Watt SM. CXCL12induced trafficking of individual hematopoietic CD133+ stem/ progenitor cells in vitro. 2012 Coldwell KE, Lee SJ, Kean J, Khoo CP, Tsaknakis G, Smythe J, Watt SM. Effects of obstetric factors and storage temperatures on the yield of endothelial colony forming cells from umbilical cord blood. Angiogenesis. 2011;14(3):381-392 Carpenter L, Malladi R, Yang CT, French A, Pilkington KJ, Forsey RW, Sloane-Stanley J, Silk KM, Davies TJ, Fairchild PJ, Enver T, Watt SM. Human induced pluripotent stem cells are capable of B-cell lymphopoiesis. Blood. 2011;117(15): 4008-4011 Stem cells and immunotherapies Theme 1 7 Contribution to patient and donor care or service development NHSBT has taken a leading role in cord blood stem cell provision by establishing the first public NHS Cord Blood Bank in the UK for clinical transplantation. Our research contributes to patient care and service development through improvements in cord blood stem cell treatments, allowing these to be made more widely available to patients in the NHS and worldwide and complementing the NHSBT strategy for cord blood. The clonal mesenchymal stem/stromal cell line, MS-5, produces specific angiocrine factors (middle array), which support blood vessel formation (top image) and mediate human blood stem cell homing to the bone marrow niche. Research and Development Triennial Report 2009-12 53 Theme 1 7 Stem cells and immunotherapies Stem cell therapies for heart disease Dr Enca Martin-Rendon and Professor Suzanne M Watt [email protected] [email protected] CONTRIBUTING TEAM MEMBERS: David M Clifford, Dominic Sweeney, George N Thomas, Dr Enca Martin-Rendon Professor Suzanne M Watt Huajun Zhang Heart disease is the major cause of death in the world and the number of patients suffering from heart failure, following a heart attack, is steadily increasing. Stem cell therapies are a promising novel treatment that may reduce the number of patients who later die or suffer from heart failure. However, we still do not understand fully how stem cells work and how the disease affects them. Ischaemic heart disease is characterised by the poor supply of blood from the coronary arteries to the myocardium, with the consequence of damaging the heart and causing heart failure in the long-term. There is an unmet clinical need to find alternative therapies as the number of patients requiring heart transplants increases. In collaboration with the Systematic Review Group at NHSBT Oxford, we have evaluated clinical evidence from randomised trials where bone marrow stem cells are administered to patients following a heart attack. We have demonstrated that stem cell treatment significantly improves contractility and heart function and significantly reduces the size of the infarct long-term. Factors such as stem cell dose, route of delivery and heart function at baseline could influence the outcome of the therapy. In addition, our research aims to improve the formation of blood vessels in the damaged heart following a heart attack. Our clinical collaborators are Professors David P. Taggart (John Radcliffe Hospital, Oxford) and Anthony Mathur (The London Chest Hospital). We are investigating how stem cells from tissues like the bone marrow can help support the formation of new blood vessels in the damaged heart. We are particularly interested in a population of mesenchymal stem cells that can be identified by the cell surface markers CD90 and CD105. We have also established a protocol by which we can readily expand these cells from the patients’ own heart tissue. The number and function of the stem cells derived from the heart can be affected by cardiovascular risk factors, such as diabetes and hypertension, and by advanced state of disease. This work will improve our understanding of the underlying mechanisms that regulate stem cell function. Contribution to patient and donor care or service development Stem cell therapy for cardiac repair is not a product that NHSBT currently offers to patients. Although the Stem Cell and Immunotherapies (SCI) service laboratory in Bristol has contributed to clinical grade CD133+ cell selection for collaborative clinical trials (TRANSACT I and II) with the Bristol Heart Institute. Stem cells will hopefully provide personalised treatments and biologics for diseases other than haematological disorders. Our aim is to make stem cell-related therapies a product or service that NHSBT could be offering to patients suffering from cardiovascular diseases in the future. Stem cell therapy for ischaemic heart disease. Bone marrow: (1) and heart-derived (2) stem cells are being investigated as treatment for patients suffering from ischaemic heart disease. Autologous stem cell transplantation may have the potential to reduce the number of patients who die or develop heart failure following a heart attack. 54 Research and Development Triennial Report 2009-12 RECENT PUBLICATIONS Chan HL, Meher Homji Z, Gomes RSM, Sweeney D, Thomas GN, Tan JJ, Zhang H, Perbellini F, Stuckey DJ, Watt SM, Taggart DP, Clarke K, Martin-Rendon E and Carr CA. Human cardiosphere-derived cells from patients with chronic ischaemic heart disease can be routinely expanded from atrial but not epicardial ventricular biopsies. Journal of Cardiovascular Translational Medicine 2012 July3. Clifford DM, Fisher SA, Brunskill SJ, Doree C, Mathur A, Clarke M, Watt SM, Martin-Rendon E. ‘Long-term effect of autologous bone marrow stem cell treatment in acute myocardial infarction: Factors that may influence outcome’ 2012a. PLoS ONE; 7(5):e37373. Clifford D, Brunskill SJ, Fisher S, Doree C, Mathur A, Watt SM, Martin-Rendon E. (2012b) Stem Cell Treatment for Acute myocardial Infarction. Cochrane Database Syst. Rev, Feb 15, 2012; 2:CD006536. 4. Brunskill SJ, Hyde CJ, Doree CJ, Watt SM and Martin-Rendon E (2009) Route of delivery and baseline left ventricular ejection fraction, key factors of bone marrow-derived cell therapy for ischaemic heart disease. Eur. J. Heart Fail. Sep; 11(9):887-96. Theme Stem cells and immunotherapies 1 7 Regulatory T-cell therapy for graft verse host disease following human stem cell transplantation Dr Wei Zhang, Professor Suzanne Watt and Professor David Roberts Dr Wei Zhang Professor Suzanne M Watt Professor David Roberts [email protected], [email protected] and [email protected] CONTRIBUTING TEAM MEMBERS: Robert Danby, Andy Peniket, Emma Frith, Sindu Nair, Jon Smythe, Sophie Clark and Sylvia Benjamin Graft versus Host Disease (GvHD) remains a major complication following human stem cell transplantation (HSCT). Regulatory T-cells (T-regs) are a naturally-occurring subpopulation of T-cells that have been shown to selectively reduce GvHD and while allowing a Graft versus Leukaemia effect (GvL) in both mouse SCT models and in limited phase I clinical HSCT trials. However, the precise mechanisms of T-reg action remain elusive. We are developing the application of T-regs as a cellular therapy in different HSCT settings to reduce GvHD and also exploring the mechanism of action of T-regs in GvHD. RECENT PUBLICATIONS Rayment R, Kooij TW, Zhang W, Siebold C, Murphy MF, Allen D, Willcox N, Roberts DJ. Evidence for the specificity for platelet HPA-1a alloepitope and the presenting HLA-DR52a of diverse antigen-specific helper T-cell clones from alloimmunised mothers. J Immunol. 2009 Jul 1;183(1):677-86 With Robert Danby and Andy Peniket (Department of Haematology, John Radcliffe Hospital, Oxford) we have measured T-regs in both the graft and in the peripheral blood of 110 patients treated at Oxford Cancer Centre over the last three years. We found a high number of T-regs in the graft correlated with improved engraftment and improved overall survival. Our data therefore support T-regs as a therapeutic intervention to improve the outcome in Haematopoietic Stem Cell Transplantation (HSCT). Nadig SN, Wieckiewicz J, Wu DC, Warnecke G, Zhang W, Luo S, Schiopu A, Taggart DP, Wood KJ. In vivo prevention of transplant arteriosclerosis by ex vivo-expanded human regulatory T-cells. Nat Med. 2010 Jul;16(7):809-13 We have validated the standard operating procedure for the Good Manufacturing Practice (GMP) isolation of T-regs in close collaboration with Stem Cell Service and Specialist Therapeutic Services in Oxford. We are proposing a phase I/II clinical study with Prof Vanderson Rocha and Andy Peniket (Department of Haematology, John Radcliffe Hospital, Oxford) in patients with reduced conditioning for HSCT. Group webpage and websites http://www.ndcls.ox.ac.uk/ ResGroups.php?GID=3 We have tested conditions for expansion of T-regs in an attempt to increase their number and function. We found a subset of mature T-regs expressing the highest levels of FoxP3 are highly sensitive to Fas-FasL induced cell death. The cell populations after expansion are therefore depleted of functional T-regs but enriched for cytokine producing conventional T-cells. In vitro expanded T-regs have also been found to be short lived after transfusion into patients. Our data therefore caution the use of T-regs expanded in the laboratory. % cells CD25+FOXP3+ % cells CD25+FOXP3+ % cells CD25+FOXP3+ Various cell surface molecules and soluble factors have been implicated in the function of T-regs. In response to TCR stimulation, FoxP3 – a crucial transcription factor for T-regs – was up-regulated and modulated expression of target genes. We have identified a window period when TCR A 75 A 75 stimulation induced FoxP3 expression in the bona fide T-regs. We have sorted CD4+ A5075 T‑cells in the PBMCs into CD25highFoxP3-, FoxP3highCD25high, CD25-FoxP3dim and CD2550 FoxP3- populations by flow cytometry. Genomic and proteomic study of T-regs and control 2550 populations of T-cells will enable the identification of the molecular processes that control 25 0 T-regs function and development. CD25+ CD25-‐ 25 B Contribution to patient and donor care or service development Allogeneic HSCT is a curative treatment for a range of haematological neoplasms. About 50% of patients receive HSCT develop Graft versus Host Disease (GvHD) following HSCT, despite GvHD prophylaxis treatment which has other complications including infections, delayed stem cell reconstitution and compromised Graft versus Leukaemia effect (GvL). T-regs bring the promise of the differential effects on the prevention of GvHD while permitting GvL. Our work on identification, isolation, expansion and mechanistic study of T-regs will facilitate the translation of this exciting advance in immunology to a novel clinical intervention. isola@on; (B) & (C CD25+ and CD25-‐ fra staining of CD25+ isola@on; (B) & (C) A staining of CD25+ an C 0 0 B B (A) Frequency of (A) Frequency of CD3+CD4+CD25+FoxP3+ cells in the CD3+CD4+CD25+ (A) Frequency of CD25+ and CD25-‐ frac@ons aAer GMP isola@on; (B) & (C) A representa@ve CD25+ and CD25 CD3+CD4+CD25+Fox staining of CD25+ and CD25-‐ frac@ons CD25+ CD25+ CD25-‐ CD25-‐ C C Tregs for GvHD, Wei Zhang Tregs f Tregs for G T-regs for GvHD, Wei Zhang Research and Development Triennial Report 2009-12 55 Theme 1 7 Stem cells and immunotherapies Developing antigen-specific adoptive cellular immunotherapy for CMV and EBV Dr Frederick Chen [email protected] CONTRIBUTING TEAM MEMBERS: Heather Beard, Guido Frumento and Mohammad Raeiszadeh NHSBT-Stem Cell Immunotherapy is the largest provider of stem cell processing in the UK. The Birmingham facility processes 200 allografts/year. Haematopoietic Stem Cell Transplantation (HSCT) can cure many patients with haematological malignancies but carries considerable risk of mortality from disease relapse, infections and graft-versus-host disease. As these complications are characterised by T-cell deficiencies, adoptive T-cell therapy (ACT) offers potential solutions. In Birmingham we are developing ACT for viral infections such as cytomegalovirus (CMV) and Epstein-Barr virus (EBV). A phase I clinical trial in adoptive transfer of HLA-tetramer-selected donor CMVspecific T-cells to HSCT recipients achieved resolution of refractory CMV infection in 89% of patients, and demonstrated the efficacy of directly transferred fresh unmanipulated donor CMV-specific T-cells. Building on this ’first-in-man’ trial in collaboration with Prof Paul Moss, University of Birmingham, a phase II randomised controlled trial, ACE~ASPECT was launched in 2010. This multi-centre trial recruits unrelated transplant patients at high risk of CMV reactivation. To minimise donor risk and enable rapid access, CMV-specific T-cells are selected from donor stem cell harvests and cryopreserved for later off-the-shelf use. CMV-specific T-cells are selected with commercial HLA-multimers (Streptamers®, STAGE-GmbH, Germany). ACE~ASPECT is funded by Leukaemia Lymphoma Research and Cell Medica™, the trial sponsor. NHSBT Birmingham manufactures the therapeutic cells locally for Birmingham and Cell Medica nationally as Cytovir CMV™. The Birmingham centre provides centralised immune monitoring for trial patients. EBV is associated with several malignancies including Hodgkin’s disease, nasopharyngeal carcinoma, and post-transplant lymphoproliferative disease (PTLD) after HSCT and solid organ transplantation. As PTLD expresses EBV-derived antigens, we plan to target these with EBV-specific T-cells isolated from EBV-positive blood donors who will be recruited to a panel of pre-tested lymphocyte donors. RECENT PUBLICATIONS The prevention and treatment of cytomegalovirus infection in haematopoietic stem cell transplantation. Tuthill M, Chen FE, Paston S, et al. Cancer Immunol Immunother, 2009 The kinetics of CMV specific CD4 and CD8 T-cell reconstitution post stem cell transplantation, Raeiszadeh M, Beard H, Frumento G, et al. Abstr. NHSBT R&D Conference 2011 Evaluating novel EBV epitopes for stimulating and selecting EBV-specific T-cells for adoptive immunotherapy, Frumento G1,2, Long H2, Briggs D1 et al. Abstr. NHSBT R&D Conference 2011 Cord Blood T-cells retain early differentiation phenotype suitable for immunotherapy after TCR gene transfer to confer EBV-specificity, Frumento G, Zheng Y, Aubert G, et al., in press American Journal of Transplantation 2012 Modification of T-cells with T-cell receptors (TCR) or chimeric antigen receptors (CAR) directed against given antigens increases their potency as demonstrated by the impressive activity against chronic lymphocytic leukaemia and melanoma. However, evidence suggests in vivo efficacy depends on the persistence and replicative capacity of T-cells that decreases with age, rendering T-cells from older patients less potent. We therefore explored the utility of cord blood (CB) T-cells for ACT. EBV-specific TCR were transduced into CB T-cells and their properties studied. In comparison to adult T-cells, CB T-cells proliferate better and have longer telomeres and telomerase activity indicating greater replicative capacity and suitability for immunotherapy. The NHSBTCB Bank has over 17,000 CB units which could be utilised for T-cell immunotherapy. Contribution to patient and donor care or service development Virus-specific T-cells targeting CMV and EBV are new cell therapies for treating patients with CMV reactivation and PTLD. There is the possibility of extending ACT to treat different EBV-associated malignancies and life-threatening EBV infections in rare immunodeficiency syndromes. Clinical-diagnostic assays developed for the trial can form the basis of new immuno-diagnostic flow cytometry service to monitor anti-viral therapy. A panel of white cell donors will be established to provide cells for virusspecific ACT. 56 Research and Development Triennial Report 2009-12 Adoptive cellular therapy: A transplant patient receiving T-cells. Inset: a syringe containing a suspension of T-lymphocytes. Theme Stem cells and immunotherapies 1 7 Stem cells in leukaemia Dr Allison Blair [email protected] CONTRIBUTING TEAM MEMBERS: Charlotte Cox and Paraskevi Diamanti The prospects for patients with leukaemia have improved significantly and many people can now be cured with intensive therapy, including stem cell transplantation. However, relapse rates remain high for patients who have disease that is resistant to treatment and in patients where the transplants are ineffective, often due to insufficient numbers of stem cells in the transplanted material. We are studying the characteristics of leukaemia cells to understand the differences between stem cells that can initiate leukaemia and haemopoietic stem cells that produce normal blood cells. We have studied samples from children with leukaemia to determine which leukaemia cells may be responsible for causing relapse and to develop methods of targeting these resistant cells. We demonstrated that some leukaemia cells, known as leukaemia stem cells, can initiate and maintain the disease. Leukaemia stem cells may be responsible for causing relapse, so it will be important to develop therapies that can eliminate these cells to prevent further disease progression. We are using in vitro and in vivo model systems of leukaemia to test the effects of current and novel therapeutic agents and to develop therapies that can target these leukaemia stem cells. The response of leukaemia patients to the first few weeks of therapy is a good indicator of whether their treatment needs to be intensified or can be reduced. This is known as minimal residual disease (MRD) monitoring. We are investigating leukaemia stem cells in an attempt to identify markers on these cells that can be used in MRD tracking techniques. In this way it may be possible to improve disease monitoring and detect relapse at an early stage. RECENT PUBLICATIONS Cox CV, Diamanti P, Evely RS, Kearns PR, Blair A. Expression of CD133 on leukemia initiating cells in childhood ALL. Blood 2009; 113(14): 3287-3296 Diamanti P. and Blair A. Stem cells in childhood acute lymphoblastic leukemia: identifying the most relevant targets for therapy. Blood 2009; 113(18): 4477-4478 Diamanti P, Cox CV, Blair A. Comparison of childhood leukemia initiating cell populations in NOD/ SCID and NSG mice. Leukemia 2012;26(2):376-380 Group webpage http://www.bristol.ac.uk/ cellmolmed/stem-cells/ haemopoietic In order to provide improved therapeutic products for these patients we are attempting to expand the number of haemopoietic stem cells that are present in donated cord blood. Cord blood is a readily available source of cells for transplantation but the number of stem cells is low and this has restricted its use to mainly paediatric patients. Increasing the number of stem cells transplanted should result in replacement of the diseased leukaemia cells with normal blood cells and improve survival and quality of life for patients. These approaches should improve current monitoring and treatment options for patients. Contribution to patient and donor care or service development The in vitro culture system we developed to support proliferation of acute lymphoblastic leukaemia cells in vitro has been implemented by the Regional Genetics Laboratory in the South West to improve the quality and quantity of cytogenetic analyses of ALL cells for routine diagnostic screening. The system we developed enables faster, more efficient cytogenetic analysis, which is more likely to result in an accurate karyotype. Testing effects of drugs on leukaemia cells Left panels: confocal images of leukaemia cells five hours following drug treatment, showing reduced green fluorescence in the treated sample. Right panels: two months after treatment, leukaemia cells cannot be detected in treated samples. Research and Development Triennial Report 2009-12 57 Theme 1 8 Molecular and tissue engineering Development of 2nd and 3rd generation tissue grafts Professor John Kearney [email protected] CONTRIBUTING TEAM MEMBERS: Paul Rooney, Akila Chandrasekar and Richard Lomas Tissue Services has continued to develop second generation, decellularised tissue grafts owing to their reduced immunogenicity and their potential for recolonisation by recipient cells. For the most promising tissues, the basic research has been followed by a programme of translational research. Decellularised human dermis has been clinically evaluated as a treatment for chronic non-healing leg ulcers. This treatment has been shown to improve the ulcers and in many cases lead to complete healing. Further studies will evaluate the clinical performance of the dermis in other indications including severe burns and rotator cuff injury. Clinical trials of decellularised cardiovascular tissues are currently being planned. Although decellularised tissue allows recolonisation of the tissue matrix by the recipient’s cells, there are clinical situations where progenitor or stem cells are very few in number, which would lead to significant delays in recolonisation. We have therefore begun to develop third generation grafts where the recipient cells are encouraged to recolonise and differentiate in vitro prior to implantation. We have shown that decellularised dermis can be repopulated with recipient fibroblasts and keratinocytes to produce an autologous-like skin graft with a well formed epidermis and stratum corneum (see Figure 1). For this study we used progenitor cells however stem cells have been evaluated for other tissue matrices. Studies with human mesenchymal stem cells have demonstrated that cyclic compressive strain alone induces differentiation into osteogenic or chondrogenic lineages depending on the applied strain. RECENT PUBLICATIONS Shortt A et al. The effect of amniotic membrane preparation method on its ability to serve as a substrate for the ex-vivo expansion of limbal epithelial cells. Biomaterials 2009; 30(6):105665. Michalopoulos E et al. Development of methods for studying the differentiation of human mesenchymal stem cells under cyclic compressive strain. Tissue Eng. Part C, 2012; 18(4):252-62. Wilshaw SP et al. Development and characterisation of acellular allogeneic arterial matrices. Tissue Eng. Part A, 2012;18(5-6):471-83. Kearney J N et al. Engineering of human tissue grafts. In Tissue and Cell Processing an Essential Guide, Wiley-Blackwell, 2012; 310-326. Further studies have evaluated whether limbal stem cells can be combined with decellularised matrices to provide a mechanism to replace missing cornea and hence restore sight. Contribution to patient and donor care or service development Decellularised dermis does not elicit an immune response and is capable of becoming repopulated with recipient cells. During the clinical evaluation, the dermis was repopulated with recipient fibroblastic cells and blood vessels and a new epidermis formed over the tissue, leading to complete healing of the wound. This successful safety/efficacy evaluation now allows us to launch decellularised dermis as a new Tissue Services product in 2012 in accordance NHSBT Strategic Plan for targeted new product development and issue within Tissue Services. Figure 1. Re-population of decellularised dermis with dermal fibroblasts and keratinocytes. 58 Research and Development Triennial Report 2009-12 Figure 2. Appearance of cultured neoskin. Theme Molecular and tissue engineering 1 8 Tissue Development Laboratory – from research to service Dr Paul Rooney [email protected] CONTRIBUTING TEAM MEMBERS: Mark Eagle, Penny Hogg, Alasdair Kay and John Kearney Over the past three years, the Tissue Development Laboratory (TDL) has concentrated on developing new tissue allograft products and on improving existing allografts based on in-house work and data coming through from our research collaborators. The TDL has been instrumental in adding two new allograft products into the range of grafts available to surgeons in the UK; we have achieved one patent and have improved protocols for skin and bone processing. In addition, members of the lab have successfully brought in income for NHSBT by performing contract manufacturing work for two biotechnology companies. RECENT PUBLICATIONS Wilshaw SP, Rooney P, Berry H et al. Development and characterisation of acellular allogeneic arterial matrices. Tissue Engineering 2012; 18:471-483 Rooney P and Kearney J. New developments in Regenerative Medicine, Blood and Transplant Matters, 2011; 33: 22-23 We have successfully developed a sterilised, de-cellularised dermis, which shows up to 98% removal of donor DNA without affecting any of the biological, biomechanical or biochemical properties of the tissue (Figure 1). This process has been translated into GMP tissue processing and is currently being assessed in a clinical setting. Hogg P, Rooney P and Kearney J. Development of a decellularised dermis. Cell and Tissue Banking 2012, E-pub ahead of print Similarly, we have developed a method of producing demineralised bone matrix (DBM) from the shafts of long bones and again this has been translated into GMP processing. The DBM has been made into pastes and putties and is capable of inducing new bone formation in an animal model (Figure 2); a clinical assessment is planned to begin mid-2012. Baylis O, Rooney P, Figueiredo F et al. Epithelial outgrowth from human cadaveric limbal explants on human amniotic membrane is delayed by the duration of corneal organ culture. J. Cellular Physiology, 2012 e-pub ahead of print We have patented a method of washing and sterilising intact femoral head bone and part of the process has been incorporated into an improved method of washing deceased donor bone, which is now supplied to surgeons. In addition, we have developed methodology for cooling whole femoral condyles from knee joints to -50oC without freezing or damaging the cells and we are continuing to develop a method of storing these living, articular cartilage allografts long-term for issuing to surgeons ‘off the shelf’ for transplant procedures as required. More rapid bone repair We have expanded our collaborations to include Queen’s University of Belfast and Cambridge University and are currently working on making bioactive bone cement, which incorporates DBM and/or human collagen, and which does not generate heat as it cures. This cement may stimulate enhanced and more rapid bone repair when used in orthopaedic procedures. The TDL has also worked very closely with the new Medicines and Health Products Regulatory Authority (MHRA) licensed Liverpool Advanced Therapy Unit to provide expertise and facilities for the validation and translational work required to bring cellular therapy products to clinical trials. Two new tissue allografts have been introduced into the repertoire of grafts available to surgeons. De-cellularised dermis can be used to treat burns, non-healing ulcers, rotator cuff injuries and in breast reconstruction. The de-cellularised matrix can be repopulated with recipient cells and become incorporated into the recipient with the potential to grow and repair as part of the recipient. Demineralised bone matrix will be used to enhance repair and new bone formation, as it is made into a paste and putty, it can be moulded and pressed into the size and shape of a defect. Figure 2. A and B, DBM paste inside of and being extruded from a syringe; C, new bone formation induced when DBM is implanted into a muscle. BM = bone marrow; DBM = remnants of implanted DBM; Ob = newly differentiated osteoblasts forming new bone. Figure 1. Appearance of cells and nuclei in cellular skin and cellular dermis and absence of nuclei in decellularised dermis (DCD). H&E and DAPI stains. A B C Research and Development Triennial Report 2009-12 59 Theme 1 8 Molecular and tissue engineering Creating new blood vessels for tissue repair Professor Suzanne Watt [email protected] CONTRIBUTING TEAM MEMBERS: Anita Mistry, Grigorios Tsaknakis, Cheen Khoo, Jen Kean, Dan Markeson, Enca Martin-Rendon and Laura Newton Cardiovascular diseases and delayed wound healing are enormous burdens to both patients and healthcare systems, with expenditure exceeding £16 billion in the UK alone. Such diseases and injuries may benefit from regenerative medicine approaches. The human skin (dermis) presents an ideal model for tissue repair, because it is thin, contains a microcirculation rather than a macrocirculation, and there are FDA approved dermal substitutes in clinical use. One focus of our laboratory is therefore on skin repair following burn injuries, in resistant non-healing chronic wounds or in inherited/congenital skin conditions. Although allografts or autografts and biologics have been used, autologous full thickness skin grafts are currently the best means of resurfacing wounds, but, where these are unavailable, artificial bio-engineered skin substitutes should prove equally effective. A range of bioengineered skin constructs exists, yet there remains no ideal composite skin substitute for permanent wound closure. However, tissue engineered grafts often fail in the clinic because they do not develop a sufficiently rapid blood supply. Key challenges include achieving early revascularisation of the graft, identifying the best cells and/or biologics for optimal re-vascularisation and determining their potency in different individuals, enhancing vascular cell numbers and efficacy in revascularisation for enhanced skin repair, while limiting wound contracture and scarring, and selection of optimal skin construct. In addressing these challenges, we have assessed the ability of vascular stem/progenitor cells (endothelial and mesenchymal) from different pre- and post-natal sources to form blood vessels both in vitro and in vivo and have identified molecules contributing to improved vessel formation in 2D and 3D cultures using functional readouts (collaboration with Dr Maria Roubelakis, Academy of Sciences in Athens). We have also developed a biobank of vascular cells with colleagues in the University of Oxford (Professors Keith Channon and Hugh Watkins, and Dr Paul Leeson) for molecular and genetic studies from individual matched donor umbilical cords. A key success has been the development in collaboration with Professor Sheila MacNeil’s group (University of Sheffield) of a clinical grade carrier for efficient transfer of mesenchymal stem cells, which support blood vessel formation to decellularised human dermis in vitro. RECENT PUBLICATIONS Walker NG, Mistry A, Smith LE, Eves PC, Foster S, Tsaknakis G, Watt SM, MacNeil S. A chemically defined carrier for the delivery of human mesenchymal stem/stromal cells to skin wounds. Tissue Eng. 2012;18:143-155 Athanassopoulos A, Tsaknakis G, Newey SE, Harris AL, Kean J, Tyler MP, Watt SM. Microvessel networks in pre-formed in artificial clinical grade dermal substitutes in vitro using cells from haematopoietic tissues. Burns 2012;38:691-701 Watt SM, Athanassopoulos A, Harris AL, Tsaknakis G. Human endothelial stem/progenitor cells, angiogenic factors and vascular repair. J.R.Soc.Interface 2010;7 Suppl 6:S731-S751 Zhang Y, Fisher N, Newey SE, Smythe J, Tatton L, Tsaknakis G, Forde SP, Carpenter L, Athanassopoulos T, Hale SJ, Ferguson DJ, Tyler MP, Watt SM. The impact of proliferative potential of umbilical cord-derived endothelial progenitor cells and hypoxia on vascular tubule formation in vitro*. Stem Cells Dev. 2009; 18(2): 359-375 Contribution to patient and donor care or service development Stem Cells and Immunotherapies (SCI) has established Human Tissue Authority (HTA) Medicines and Healthcare Products Regulatory Authority (MHRA) imp licensed laboratories, a requirement for manufacturing advanced Improving Cord Blood Transplant Outcomes by therapeutic medicinal products (ATMPs) for human application. Understanding the Bone Marrow Niche Additionally, as part of an EU Cascade consortium, standardised European Good Manufacturing Production (GMP) protocols have already been developed for defining manufacturing and release criteria for human Mesencymal Stem/Stoma Cells and for taking these cells to clinic. These developments together with our research on wound healing will provide the necessary infrastructure to take these approaches into clinical practice for the benefit of NHS patients. Mesenchymal stem/stromal cells (MSCs) grow on an acrylic acid coated carrier and can be transferred to human decellularised dermis as a prelude to treating chronic non healing wounds (carried out in collaboration with Prof. Sheila MacNeill) 60 Research and Development Triennial Report 2009-12 Theme Molecular and tissue engineering 1 8 The work of the Clinical Biotechnology Centre in supporting molecular therapy trials Dr Paul Lloyd-Evans [email protected] CONTRIBUTING TEAM MEMBERS: Joan McColl, Denise Phillips, Antony Wright, Amanda Keyes, Jillian Harris, Tracy Hutcherson, Helena Pastor, Karen Burks & Keith Smith (QA) and Simon Ellinson (Business Development Unit) The Clinical Biotechnology Centre (CBC) located at the University of Bristol, Langford is an integral part of the NHSBT research strategy for service and product development. Its dedicated facility is well equipped and designed, and combines the expertise of both NHSBT quality management and Good Manufacturing Practice (GMP) trained scientific staff to operate in a highly regulated environment. Our MHRA license has enabled us to specialise in the small scale manufacture and importation of novel gene therapy and recombinant protein investigational medicinal products for clinical trials in the EU. To date it has manufactured over 40 gene therapy products and five novel proteins for trials and is identified as an invaluable national resource whose work is of clear relevance to NHSBT business. It remains an integral part of the recently National Institute for Health Research (NIHR) funded NHSBT Molecular and Tissue Engineering programme led by Professor Amit Nathwani (University College London (UCL) and NHSBT) and are collaborators on a £1.2 million NIHR Efficacy and Mechanisms Evaluation grant with Professor Christian Ottensmeier (Cancer Sciences, Faculty of Medicine, Southampton) for a clinical trial into haematological malignancy. Over the past three years the CBC has diversified its services and products by developing new manufacturing processes, offering external Quality Control (QC) testing services and by varying its Medicines and Health products Regulatory Authority (MHRA) license to realise other business opportunities. A GMP process for conjugating monoclonal antibodies for radio-immunotherapy in the treatment of leukaemia was introduced as well as a platform process for the production of recombinant proteins from bacteria. A significant strategic partnership with the world renowned University College London Gene Therapy Consortium was established in 2011 when UCL’s new GMP facility was adopted onto NHSBT’s MHRA license. In addition the CBC is providing ongoing quality management support and process development expertise, along with the provision of a pipeline of DNA vectors in support of its viral vector gene therapy programme. The CBC is playing its part in the ongoing Absorbance gene therapy trials for the treatment of Cystic Fibrosis with the Units UK Cystic Fibrosis Gene Therapy Consortium and for Professor Amit Nathwani’s highly acclaimed viral vector trial for the treatment of Factor IX haemophilia. The CBC is providing regulatory support for the importation of clinical trial materials from the USA for delivery to the clinical trial centres involved. RECENT PUBLICATIONS Amit C. Nathwani, et al. AdenovirusAssociated Virus Vector – Mediated Gene Transfer in Hemophilia N Engl J Med 2011; 365:2357-2365 Figure 1. Purification of a plasmid DNA vaccine by liquid chromatography in the clean room. Plasmid DNA Gel Analysis Purified pDNA OC SC 1500 bp Throughout 2011-12 the CBC has been working closely with Professor David Anstee’s Group in growing artificial red cells in a GMP bioreactor as part of initial scale-up and feasibility studies for potential clinical studies in due course. Contribution to patient and donor care or service development The CBC is part of an important network of close to patient GMP facilities within the organisation and an ideal setting for the development of new biological medicinal products, specifically focused at introducing life changing therapies for patients in the major NHS priority areas. Manufactured products are currently in clinical trials for the treatment of a broad range of diseases including haematological malignancies, prostate cancer, Cystic Fibrosis and HIV with up and coming trials for graft versus host disease and rheumatoid arthritis opening soon. Figure 2. Chromatogram of purified plasmid DNA (pDNA) vaccine from a bacterial lysate. Research and Development Triennial Report 2009-12 61 Awards Theme 1and honours 2009-11 Professor David Anstee Editorial Board of Blood Dr Lesley Bruce British Blood Transfusion Society Kenneth Goldsmith (2010) Dr Nick Burton British Blood Transfusion Society Race and Sanger Award (2010) Professor Dave Collett Member of Editorial Board of Statistical Methods in Medical Research Dr Geoff Daniels Secretary General of the International Society for Blood Transfusion June 2010 – present Sub-Editor of Vox Sanguinis Editorial board of Transfusion Editorial board of Blood Reviews Chair of the ISBT Working Party on Red Cell Immunogenetics and Blood Group Terminology until June 2010 President of British Blood Transfusion Society until September 2009 Dr Lars Dölken Robert Koch Post-Doctoral Prize (2011) Rachel Johnson British Transplantation Society Council member Member of Editorial Board of Transplantation Dr Enca Martin-Rendon Editor of the Cochrane Heart Group, 2012 Professor Mike Murphy Associate Editor, Transfusion Medicine Reviews. 2012 Elected Board Member, American Association of Blood Banks 2010-12 Claes Högman Lecturer of Transfusion Medicine. Swedish Society of Transfusion Medicine. 2009 British Computer Society and Computing UK IT Awards. Winner, Public Sector Project of the Year. ‘BloodTrack’. 2009 Health Service Journal Awards. Winner, Improving Care with Technology category. ‘Transformational improvement in bedside clinical practice using wireless enabled bedside technology’. Shortlisted for Secretary of State’s Award for Excellence in Healthcare Management. 2009 Patient Safety Awards. Shortlisted for Technology and IT to Improve Patient Safety category. Electronic Blood Transfusion System. 2009 Healthcare Quality Improvement Partnership (HQIP) Clinical Audit Awards. Shortlisted for Patient Safety Award. National Comparative Audit of Blood Transfusion. 2010 Editorial Board Membership: Transfusion Transfusion Medicine Expert Reviews in Hematology 62 Research and Development Triennial Report 2009-12 Dr Cristina Navarrete Elected Councillor of the International Histocompatibility Workshop Dr Paul Rooney Member of the Editorial Board of Cryobiology Member of the Editorial Board of Cell and Tissue Banking Professor Marion Scott Chair of the Federation for Healthcare Science from January 2008 to March 2010 Board Member of Medical Education England from February 2009 to March 2010 Board Member of the Association of Clinical Scientists from April 2009 to present Dr Ashley Toye Member of the Steering Committee for the European Red Cell Society Dr Dominic Summers British Transplantation Society Roy Calne Award (2011) Dr Stephen Thomas British Blood Transfusion Society Race and Sanger Award (2011) Professor Suzanne Watt Editorial Board of Current Tissue Engineering, 2012 Editorial Board of Niche, 2012 Editorial Board of Stem Cells and Development, 2009 1 PublicationsTheme 2009-11 Publications 2009 ACRE trial Collaborators. Effect of “collaborative requesting” on consent rate for organ donation: randomised controlled trial (ACRE trial). BMJ 2009 Oct 8;339:b3911. doi: 10.1136/bmj.b3911.:b3911. Alabraba E, Nightingale P, Gunson B, Hubscher S, Olliff S, Mirza D, et al. A re‑evaluation of the risk factors for the recurrence of primary sclerosing cholangitis in liver allografts. Liver Transpl 2009 Mar;15(3):330‑40. Brunskill SJ, Hyde CJ, Stanworth SJ, Doree CJ, Roberts DJ, Murphy MF. Improving the evidence base for transfusion medicine: the work of the UK systematic review initiative. Transfus Med 2009 Apr;19(2):59‑65. Brunskill SJ, Hyde CJ, Doree CJ, Watt SM, Martin‑Rendon E. Route of delivery and baseline left ventricular ejection fraction, key factors of bone‑marrow‑derived cell therapy for ischaemic heart disease. Eur J Heart Fail 2009 Sep;11(9):887‑96. Albanyan AM, Murphy MF, Harrison P. Evaluation of the Impact‑R for monitoring the platelet storage lesion. Platelets 2009 Feb;20(1):1‑6. Cardigan R, Philpot K, Cookson P, Luddington R. Thrombin generation and clot formation in methylene blue‑treated plasma and cryoprecipitate. Transfusion 2009 Apr;49(4):696‑703. Albanyan AM, Harrison P, Murphy MF. Markers of platelet activation and apoptosis during storage ‑ and buffy coat‑derived platelet concentrates for 7 days. Transfusion 2009 Jan;49(1):108‑17. Cardigan R, Williamson LM. Production and storage of blood components. In: Practical Transfusion Medicine, editors Murphy M & Pamphilon D, 3rd Edition (2009), Blackwells, London. Albanyan AM, Murphy MF, Rasmussen JT, Heegaard CW, Harrison P. Measurement of phosphatidylserine exposure during storage of platelet concentrates using the novel probe lactadherin: a comparison study with annexin V. Transfusion 2009 Jan;49(1):99‑107. Casals‑Pascual C, Idro R, Picot S, Roberts DJ, Newton CR. Can erythropoietin be used to prevent brain damage in cerebral malaria? Trends Parasitol 2009 Jan;25(1):30‑6. Allain JP, Belkhiri D, Vermeulen M, et al. Characterization of occult Hepatitis B virus strains in South African blood donors. Hepatology 2009; 90:1868-1876 Anderson CA, Massey DC, Barrett JC, Prescott NJ, Tremelling M, Fisher SA, et al. Investigation of Crohn’s disease risk loci in ulcerative colitis further defines their molecular relationship. Gastroenterology 2009 Feb;136(2):523‑9. Anstee DJ. Red cell genotyping and the future of pretransfusion testing. Blood 2009 Jul 9;114(2):248‑56. Avent ND, Martinez A, Flegel WA, Olsson ML, Scott ML, Nogues N, et al. The Bloodgen Project of the European Union, 2003‑2009. Transfus Med Hemother 2009;36(3):162‑7. Barrett JC, Lee JC, Lees CW, Prescott NJ, Anderson CA, Phillips A, et al. Genome‑wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region. Nat Genet 2009 Dec;41(12):1330‑4. Beckman N, Nightingale MJ, Pamphilon D. Practical guidelines for applying statistical process control to blood component production. Transfus Med 2009 Dec;19(6):329‑39. Boralessa H, Goldhill DR, Tucker K, Mortimer AJ, Grant‑Casey J. National comparative audit of blood use in elective primary unilateral total hip replacement surgery in the UK. Ann R Coll Surg Engl 2009 Oct;91(7):599‑605. Brown AC, Hallouane D, Mawby WJ, Karet FE, Saleem MA, Howie AJ, et al. RhCG is the major putative ammonia transporter expressed in the human kidney, and RhBG is not expressed at detectable levels. Am J Physiol Renal Physiol 2009 Jun;296(6):F1279‑F1290. Bruce LJ. Hereditary stomatocytosis and cation‑leaky red cells‑recent developments. Blood Cells Mol Dis 2009 May;42(3):216‑22. Bruce LJ, Guizouarn H, Burton NM, Gabillat N, Poole J, Flatt JF, et al. The monovalent cation leak in overhydrated stomatocytic red blood cells results from amino acid substitutions in the Rh‑associated glycoprotein. Blood 2009 Feb 5;113(6):1350‑7. Creary LE, Girdlestone J, Zamora J, Brown J, Navarrete CV. Molecular typing of HLA genes using whole genome amplified DNA. Transfusion 2009 Jan;49(1):57‑63. Dalton HR, Bendall RP, Keane FE, Tedder RS, Ijaz S. Persistent carriage of hepatitis E virus in patients with HIV infection. N Engl J Med 2009 Sep 3;361(10):1025‑7. Daniels G, Castilho L, Flegel WA, Fletcher A, Garratty G, Levene C, et al. International Society of Blood Transfusion Committee on terminology for red blood cell surface antigens: Macao report. Vox Sang 2009 Feb;96(2):153‑6. Daniels G. Lutheran. Immunohematology 2009;25(4):152‑9. Daniels G, Finning K, Martin P, Massey E. Noninvasive prenatal diagnosis of fetal blood group phenotypes: current practice and future prospects. Prenat Diagn 2009 Feb;29(2):101‑7. Daniels G, van der Schoot CE, Gassner C, Olsson ML. Report of the third international workshop on molecular blood group genotyping. Vox Sang 2009 May;96(4):337‑43. Caskey FJ, Johnson RJ, Fuggle SV, Start S, Pugh D, Dudley CR. Renal after cardiothoracic transplant: the effect of repeat mismatches on outcome. Transplantation 2009 Jun 15;87(11):1727‑32. Daniels G. The molecular genetics of blood group polymorphism. Hum Genet 2009 Dec;126(6):729‑42. Chapman CE, Stainsby D, Jones H, Love E, Massey E, Win N, et al. Ten years of hemovigilance reports of transfusion‑related acute lung injury in the United Kingdom and the impact of preferential use of male donor plasma. Transfusion 2009 Mar;49(3):440‑52. Davison KL, Dow B, Barbara JA, Hewitt PE, Eglin R. The introduction of anti‑HTLV testing of blood donations and the risk of transfusion‑transmitted HTLV, UK: 2002‑2006. Transfus Med 2009 Feb;19(1):24‑34. Chaffe, B, Jones J, Milkins C, et al. UK Transfusion Laboratory Collaborative: Recommended minimum standards for hospital transfusion laboratories. Transfus Med. 2009; 19; 156-158 Day E, Best D, Sweeting R, Russell R, Webb K, Georgiou G, et al. Predictors of psychological morbidity in liver transplant assessment candidates: is alcohol abuse or dependence a factor? Transpl Int 2009 Jun;22(6):606‑14. Charlton MR, Wall WJ, Ojo AO, Gines P, Textor S, Shihab FS, et al. Report of the first international liver transplantation society expert panel consensus conference on renal insufficiency in liver transplantation. Liver Transpl 2009 Nov;15(11):S1‑34. Chimma P, Roussilhon C, Sratongno P, Ruangveerayuth R, Pattanapanyasat K, Perignon JL, et al. A distinct peripheral blood monocyte phenotype is associated with parasite inhibitory activity in acute uncomplicated Plasmodium falciparum malaria. PLoS Pathog 2009 Oct;5(10):e1000631. Clewley JP, Kelly CM, Andrews N, Vogliqi K, Mallinson G, Kaisar M, et al. Prevalence of disease related prion protein in anonymous tonsil specimens in Britain: cross sectional opportunistic survey. BMJ 2009 May 21;338:b1442. doi: 10.1136/bmj. b1442.:b1442. Collett D, Sibanda N, Pioli S, Bradley JA, Rudge C. The UK scheme for mandatory continuous monitoring of early transplant outcome in all kidney transplant centers. Transplantation 2009 Oct 27;88(8):970‑5. Compston LI, Li C, Sarkodie F, Owusu-Ofori S, et al. Prevalence of persistent and latent viruses in untreated patients infected with HIV-1 from Ghana, West Africa. J Med Virol 2009; 81: 1860-1868. Cooper SC, Aldridge RC, Shah T, Webb K, Nightingale P, Paris S, et al. Outcomes of liver transplantation for paracetamol (acetaminophen)‑induced hepatic failure. Liver Transpl 2009 Oct;15(10):1351‑7. Coste J, Prowse C, Eglin R, Fang C. A report on transmissible spongiform encephalopathies and transfusion safety. Vox Sang 2009 May;96(4):284‑91. Cox CV, Diamanti P, Evely RS, et al. Expression of CD133 on leukemia initiating cells in childhood ALL. Blood 2009; 113(14): 3287-3296. Dendrou CA, Plagnol V, Fung E, Yang JH, Downes K, Cooper JD, et al. Cell‑specific protein phenotypes for the autoimmune locus IL2RA using a genotype‑selectable human bioresource. Nat Genet 2009 Sep;41(9):1011‑5. Desai M, Neuberger J. Chronic liver allograft dysfunction. Transplant Proc 2009 Mar;41(2):773‑6. Diamanti P. and Blair A. Stem cells in childhood acute lymphoblastic leukemia: identifying the most relevant targets for therapy. Blood 2009; 113(18): 4477-4478. Dudley CR, Johnson RJ, Thomas HL, Ravanan R, Ansell D. Factors that influence access to the national renal transplant waiting list. Transplantation 2009 Jul 15;88(1):96‑102. Dunn C, Peppa D, Khanna P, Nebbia G, Jones M, Brendish N, et al. Temporal analysis of early immune responses in patients with acute hepatitis B virus infection. Gastroenterology 2009 Oct;137(4):1289‑300. Ellory JC, Guizouarn H, Borgese F, Bruce LJ, Wilkins RJ, Stewart GW. Review. Leaky Cl‑HCO3‑ exchangers: cation fluxes via modified AE1. Philos Trans R Soc Lond B Biol Sci 2009 Jan 27;364(1514):189‑94. Erdmann J, Grosshennig A, Braund PS, Konig IR, Hengstenberg C, Hall AS, et al. New susceptibility locus for coronary artery disease on chromosome 3q22.3. Nat Genet 2009 Mar;41(3):280‑2. Finning K, Martin P, Daniels G. The use of maternal plasma for prenatal RhD blood group genotyping. Methods Mol Biol 2009;496:143‑57. Flatt JF, Bruce LJ. The hereditary stomatocytoses. Haematologica 2009 Aug;94(8):1039‑41. Research and Development Triennial Report 2009-12 63 Publications 2009-11 Flegel WA, von Z, I, Doescher A, Wagner FF, Strathmann KP, Geisen C, et al. D variants at the RhD vestibule in the weak D type 4 and Eurasian D clusters. Transfusion 2009 Jun;49(6):1059‑69. Forsythe J, Cardigan R. Advisory committee on the safety of blood, tissues and organs. Transfus Med 2009 Apr;19(2):57‑8. Francis JJ, Stockton C, Eccles MP, Johnston M, Cuthbertson BH, Grimshaw JM, et al. Evidence‑based selection of theories for designing behaviour change interventions: using methods based on theoretical construct domains to understand clinicians’ blood transfusion behaviour. Br J Health Psychol 2009 Nov;14(Pt 4):625‑46. Francis JJ, Tinmouth A, Stanworth SJ, Grimshaw JM, Johnston M, Hyde C, et al. Using theories of behaviour to understand transfusion prescribing in three clinical contexts in two countries: development work for an implementation trial. Implement Sci 2009 Oct 24;24(4):70. Ganesh SK, Zakai NA, van Rooij FJ, Soranzo N, Smith AV, Nalls MA, et al. Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium. Nat Genet 2009 Nov;41(11):1191‑8. Ghevaert C, Rankin A, Huiskes E, Porcelijn L, Javela K, Kekomaki R, et al. Alloantibodies against low‑frequency human platelet antigens do not account for a significant proportion of cases of fetomaternal alloimmune thrombocytopenia: evidence from 1,054 cases. Transfusion 2009 Oct; 49(10):2084‑9. Gillies M, Chohan G, Llewelyn CA, Mackenzie J, Ward HJ, Hewitt PE, et al. A retrospective case note review of deceased recipients of vCJD‑implicated blood transfusions. Vox Sang 2009 Oct;97(3):211‑8. Girdlestone J, Limbani VA, Cutler AJ, Navarrete CV. Efficient expansion of mesenchymal stromal cells from umbilical cord under low serum conditions. Cytotherapy 2009;11(6):738‑48. Hearnshaw S, Brunskill S, Doree C, Hyde C, Travis S, Murphy MF. Red cell transfusion for the management of upper gastrointestinal haemorrhage. Cochrane Database Syst Rev 2009 Apr 15;(2):CD006613. Hermans C, Wittevrongel C, Thys C, Smethurst PA, van GC, Freson K. A compound heterozygous mutation in glycoprotein VI in a patient with a bleeding disorder. J Thromb Haemost 2009 Aug;7(8):1356‑63. Hess JR, Sparrow RL, van der Meer PF, Acker JP, Cardigan RA, Devine DV. Red blood cell hemolysis during blood bank storage: using national quality management data to answer basic scientific questions. Transfusion 2009 Dec;49(12):2599‑603. Hill AJ, Zwart I, Tam HH, Chan J, Navarrete C, Jen LS, et al. Human umbilical cord blood‑derived mesenchymal stem cells do not differentiate into neural cell types or integrate into the retina after intravitreal grafting in neonatal rats. Stem Cells Dev 2009 Apr;18(3):399‑409. Hill AJ, Zwart I, Samaranayake AN, Al‑Allaf F, Girdlestone J, Mehmet H, et al. Rat neurosphere cells protect axotomized rat retinal ganglion cells and facilitate their regeneration. J Neurotrauma 2009 Jul;26(7):1147‑56. Hill QA, Hill A, Allard S, Murphy MF. Towards better blood transfusion‑recruitment and training. Transfus Med 2009 Feb;19(1):2‑5. 64 Hollyman D, Stefanski J, Przybylowski M, Bartido S, Borquez‑Ojeda O, Taylor C, et al. Manufacturing validation of biologically functional T‑cells targeted to CD19 antigen for autologous adoptive cell therapy. J Immunother 2009 Feb;32(2):169‑80. Hustinx H, Poole J, Bugert P, Gowland P, Still F, Fontana S, et al. Molecular basis of the Rh antigen RH48 (JAL). Vox Sang 2009 Apr;96(3):234‑9. Ijaz S, Vyse AJ, Morgan D, Pebody RG, Tedder RS, Brown D. Indigenous hepatitis E virus infection in England: more common than it seems. J Clin Virol 2009 Apr;44(4):272‑6. Johnson RJ, Clatworthy MR, Birch R, Hammad A, Bradley JA. CMV mismatch does not affect patient and graft survival in UK renal transplant recipients. Transplantation 2009 Jul 15;88(1):77‑82. Jones CI, Bray S, Garner SF, Stephens J, de BB, Angenent WG, et al. A functional genomics approach reveals novel quantitative trait loci associated with platelet signalling pathways. Blood 2009 Aug 13;114(7):1405‑16. Jones CI, Garner SF, Moraes LA, Kaiser WJ, Rankin A, Ouwehand WH, et al. PECAM‑1 expression and activity negatively regulate multiple platelet signalling pathways. FEBS Lett 2009 Nov 19;583(22):3618‑24. Jones MN, Armitage WJ, Ayliffe W, Larkin DF, Kaye SB. Penetrating and deep anterior lamellar keratoplasty for keratoconus: a comparison of graft outcomes in the United Kingdom. Invest Ophthalmol Vis Sci 2009 Dec;50(12):5625‑9. Kathiresan S, Voight BF, Purcell S, Musunuru K, Ardissino D, Mannucci PM, et al. Genome‑wide association of early‑onset myocardial infarction with single nucleotide polymorphisms and copy number variants. Nat Genet 2009 Mar;41(3):334‑41. Khoo CP, Valorani MG, Brittan M, Alison MR, Warnes G, Johansson U, et al. Characterization of endothelial progenitor cells in the NOD mouse as a source for cell therapies. Diabetes Metab Res Rev 2009 Jan;25(1):89‑93. King MJ, Bruce L, Whiteway A. The mutant erythrocyte band 3 protein in Southeast Asian ovalocytosis does not bind eosin‑5‑maleimide. Int J Lab Hematol 2009 Feb;31(1):116‑7. Kirwan M, Beswick R, Vulliamy T, Nathwani AC, Walne AJ, Casimir C, et al. Exogenous TERC alone can enhance proliferative potential, telomerase activity and telomere length in lymphocytes from dyskeratosis congenita patients. Br J Haematol 2009 Mar;144(5):771‑81. Kitchen AD, Hewitt PE. HIV screening reactivity due to donor participation in HIV vaccine trials. Vox Sang 2009 Aug;97(2):169‑71. Lamikanra AA, Theron M, Kooij TW, Roberts DJ. Hemozoin (malarial pigment) directly promotes apoptosis of erythroid precursors. PLoS One 2009 Dec 24;4(12):e8446. Lawrie AS, Albanyan A, Cardigan RA, Mackie IJ, Harrison P. Microparticle sizing by dynamic light scattering in fresh‑frozen plasma. Vox Sang 2009 Apr;96(3):206‑12. Lee E, Redman M, Owen I. Blocking of fetal K antigens on cord red blood cells by maternal anti‑K. Transfus Med 2009 Jun;19(3):139‑40. Lefrere JJ, Hewitt P. From mad cows to sensible blood transfusion: the risk of prion transmission by labile blood components in the United Kingdom and in France. Transfusion 2009 Apr;49(4):797‑812. Research and Development Triennial Report 2009-12 Lemnrau AG, Cardoso S, Creary LE, Brown C, Miretti M, Girdlestone J, et al. Human platelet antigen typing of neonatal alloimmune thrombocytopenia patients using whole genome amplified DNA and a 5’‑nuclease assay. Transfusion 2009 May;49(5):953‑8. Lenci I, Alvior A, Manzia TM, Toti L, Neuberger J, Steeds R. Saline contrast echocardiography in patients with hepatopulmonary syndrome awaiting liver transplantation. J Am Soc Echocardiogr 2009 Jan;22(1):89‑94. Li KK, Neuberger J. Recurrent nonviral liver disease following liver transplantation. Expert Rev Gastroenterol Hepatol 2009 Jun;3(3):257‑68. Li KK, Neuberger J. The management of patients awaiting liver transplantation. Nat Rev Gastroenterol Hepatol 2009 Nov;6(11):648‑59. Llewelyn CA, Wells AW, Amin M, Casbard A, Johnson AJ, Ballard S, et al. The EASTR study: a new approach to determine the reasons for transfusion in epidemiological studies. Transfus Med 2009 Apr;19(2):89‑98. Lok CY, Merryweather‑Clarke AT, Viprakasit V, Chinthammitr Y, Srichairatanakool S, Limwongse C, et al. Iron overload in the Asian community. Blood 2009 Jul 2;114(1):20‑5. Lowe DP, Cook MA, Bowman SJ, Briggs DC. Association of killer cell immunoglobulin‑like receptors with primary Sjogren’s syndrome. Rheumatology (Oxford) 2009 Apr;48(4):359‑62. Martin‑Rendon E, Snowden JA, Watt SM. Stem cell‑related therapies for vascular diseases. Transfus Med 2009 Aug;19(4):159‑71. Massey E, Paulus U, Doree C, Stanworth S. Granulocyte transfusions for preventing infections in patients with neutropenia or neutrophil dysfunction. Cochrane Database Syst Rev 2009 Jan 21;(1):CD005341. Meisinger C, Prokisch H, Gieger C, Soranzo N, Mehta D, Rosskopf D, et al. A genome‑wide association study identifies three loci associated with mean platelet volume. Am J Hum Genet 2009 Jan;84(1):66‑71. Mells G, Mann C, Hubscher S, Neuberger J. Late protocol liver biopsies in the liver allograft: a neglected investigation? 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Patents 2009-12 Inventors Enca Martin-Rendon and Professor Suzanne Watt Subject Method for evaluating angiogenic potential Reference GB1007159-5 Filing Date 29/04/2010 Inventors Lee Carpenter and Professor Suzanne Watt Subject Cardiovascular cells Reference GB1121101-8 Filing Date 08/12/2011 Inventors Professor John Kearney, Paul Rooney, George Galea, Tom McQuillan Subject Bone washing process Reference GB2469205A Filing Date 06/10/2010 Inventors Professor David Anstee and Jan Frayne Subject Conversion of fetal hemoglobin Reference GB1200458-6 Filing Date 11/01/2012 Inventors Enca Martin-Rendon and Professor Suzanne Watt Subject Angiogenic factors Reference GB1118024-7 Filing Date 19/10/2011 Research and Development Triennial Report 2009-12 73 74 Research and Development Triennial Report 2009-12 Research and Development Triennial Report 2009-12 75
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