Defense related gene
Ethylene signalling and
biosynthetic pathway
AtEDR1
AtACO2
AtACS1
AtACS2
AtACS4
AtACS5
AtACS6
AtACS7
AtACS8
AtACS9
AtACS10
AtETO1
AtETR1
AtETR2
AtCul3
Gene synonym
mRNA accession (A.
thaliana )
A. thaliana
reference gene
Best Pea
transcript
accession match
(TBLASTX)
Best Expect
<1e-5
(TBLASTX)
2nd best pea
transcript
accession
(TBLASTX)
2nd best
expect
(TBLASTX)
3rd best pea
transcript
accession
(TBLASTX)
3rd best
expect
(TBLASTX)
ENHANCED DISEASE
RESISTANCE 1
ERF/AP2 transcription factor
DDF2
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 1
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 2
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 4
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 5
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 6
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 7
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 8
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 9
1AMINOCYCLOPROPANE1-CARBOXYLATE
SYNTHASE 10
ETHYLENE
OVERPRODUCER 1
ETHYLENE RESPONSE 1
ETHYLENE RESPONSE 2
cullin 3
NM_100745
AT1G08720
2689726
1.40E-120
NM_104981
AT1G63030
2697694
2.00E-36
2683492
8.80E-27
2689849
8.20E-18
NM_116016
AT3G61510
2697062
6.00E-38
NM_100030
AT1G01480
2697062
4.60E-38
NM_127846
AT2G22810
2697062
4.60E-43
NM_125977
AT5G65800
2697062
1.10E-49
NM_117199
AT4G11280
2697062
1.40E-46
NM_118753
AT4G26200
2697062
5.60E-48
NM_119939
AT4G37770
2697062
1.80E-52
NM_114830
AT3G49700
2697062
5.80E-50
NM_104974
AT1G62960
2697062
7.10E-61
NM_115036
AT3G51770
2701973
7.00E-103
2695047
4.60E-46
NM_105305
NM_113216
NM_102447
AT1G66340
AT3G23150
AT1G26830
2683102
2691392
2684463
4.20E-126
0.00E+00
1.00E-148
2691392
2683102
2697572
5.50E-126
0.00E+00
1.40E-108
2677756
1.80E-46
Pea transcript
accession
primers were
designed to
NM_129658
AT2G40940
2687360
1.20E-165
2693879
4.20E-115
AT1G04310
AT3G04580
AT5G03730
2691392
2691392
2689726
5.20E-161
0.00E+00
1.20E-153
2683102
2683102
2701408
1.80E-160
0.00E+00
7.80E-100
2687360
2677756
1.80E-25
3.80E-57
AT5G03280
2683780
7.50E-106
AT3G20770
2698573
1.80E-155
2691151
8.80E-149
2687965
1.60E-88
AT2G27050
2698573
4.00E-113
2691151
7.6-106
2687965
8.00E-58
AT5G21120
2698573
1.10E-83
2691151
3.70E-76
AtEBF1
NM_100312
ETHYLENE INSENSITIVE 4 NM_202489
CONSTITUTIVE TRIPLE
NM_180429
RESPONSE 1
ETHYLENE INSENSITIVE NM_120406
2
ETHYLENE-INSENSITIVE NM_112968
3
ETHYLENE-INSENSITIVE NM_128263
3-like 1
ETHYLENE-INSENSITIVE NM_122120
3-like 2
EIN3-binding F box protein 1 NM_128106
AT2G25490
2683045
0.00E+00
2679015
8.60E-104
AtERF1
NM_113225
AT3G23240
2697017
4.90E-22
NM_124093
AT5G47220
2697017
1.60E-51
2696966
1.20E-24
NM_103946
AT1G50640
2697012
1.10E-28
2683169
4.50E-28
2675776
9.90E-24
NM_112384
AT3G15210
2695449
6.80E-29
NM_127025
AT2G14610
2700651
5.90E-61
2701968
3.30E-50
2700651
2.60E-18
NM_115586
NM_112085
NM_111344
NM_106151
AT3G57260
AT3G12500
AT3G04720
AT1G75040
2692178
2697504
2695654
2683492
1.50E-78
1.10E-148
1.40E-48
9.20E-22
2701626
2697726
2695660
2697080
1.50E-78
3.30E-136
3.20E-46
2.00E-19
NM_105885
AT1G72260
no match
NM_101776
AT1G19180
2694361
NM_129014
AT2G34600
no match
NM_102753
AT1G30135
no match
NM_105738
AT1G70700
2697891
8.80E-21
NM_114212
AT3G43440
2678149
9.20E-14
NM_129552
AT2G39940
2697985
6.60E-98
2694294
2.40E-69
NM_123629
NM_113475
NM_113476
NM_113477
NM_101199
AT5G42650
AT3G25760
AT3G25770
AT3G25780
AT1G13280
2697079
2680490
2680490
2680490
2680490
2.30E-101
5.80E-59
1.60E-64
3.50E-82
9.60E-68
AtERS1
AtERS2
AtEIN4
AtCTR1
AtEIN2
AtEIN3
AtEIL1
AtEIL2
ETHYLENE RESPONSE
SENSOR 1
ethylene response sensor 2
ETHYLENE RESPONSE
FACTOR 1
AtERF2
ETHYLENE RESPONSE
FACTOR 2
AtERF3
ETHYLENE RESPONSE
FACTOR 3
AtERF4
ETHYLENE RESPONSE
FACTOR 4
Pathogenesis-related proteins
AtPR1
PATHOGENESISRELATED PROTEIN 1
AtPR2
3-GLUCANASE
AtPR3
basic chitinase
AtPR4
HEVEIN-LIKE
AtPR5
ethylene-responsive
transcription factor ERF018
AtPR13 (AtTHI2.1)
THIONIN 2.1
Jasmonic acid biosynthesis and signalling
AtJAZ1
jasmonate-zim-domain
protein 1
AtJAZ7
jasmonate-zim-domain
protein 7
AtJAZ8 (TIFY 5A)
jasmonate-zim-domain
protein 8
AtJAZ9 (TIFY7)
jasmonate-zim-domain
protein 9
AtJAZ11 (TIFY 3A)
jasmonate-zim-domain
protein 11
AtCOI1
CORONATINE
INSENSITIVE 1
AtAOS
allene oxide synthase
AtAOC1
allene oxide cyclase 1
AtAOC2
allene oxide cyclase 2
AtAOC3
allene oxide cyclase 3
AtAOC4
allene oxide cyclase 4
2697017
2697017
2693240
2697821
2684794
3.30E-136
7.10E-40
9.20E-18
2692776
2697504
6.50E-19
2697079
12-oxophytodienoate
reductase 3
AtACX1
peroxisomal acyl-coenzyme
A oxidase 1
AtOPCL1
OPC-8:0 CoA ligase1
AtJAR1
jasmonic acid-amido
synthetase JAR1
AtORA59
octadecanoid-responsive
Arabidopsis AP2/ERF 59
AtORA47
ethylene-responsive
transcription factor ERF018
AtMYC2
transcription factor MYC2
AtWRKY70
WRKY transcription factor
70
AtVSP1
acid phosphatase VSP1
mRNA
AtLOX2
LIPOXYGENASE 2
AtPDF2.1
defensin-like protein 4
Salicylic acid biosynthesis and signalling
AtPAD4
PHYTOALEXIN
DEFICIENT 4
AtEDS1
enhanced disease
susceptibility 1
AtSID2 (=EDS16)
Isochorismate synthase 1
AtEDS5
ENHANCED DISEASE
SUSCEPTIBILITY 5
AtNPR1
Regulatory protein NPR1
AtTGA2
transcription factor TGA2
AtTGA5
OCS-element binding factor
5
AtWHY1
single-stranded DNA-binding
protein WHY1
AtCHL1
chlorophyllase 1
AtMES1
methyl esterase 1
AtBSMT1
S-adenosyl-L-methioninedependent methyltransferaselike protein
NM_126619
AT2G06050
2695737
4.60E-126
2677028
8.60E-97
2694863
9.90E-83
NM_117778
AT4G16760
2677540
0.00E+00
2693995
8.20E-180
2685160
2.00E-161
NM_101901
NM_001202828
AT1G20510
AT2G46370
2697742
2683776
1.20E-59
3.10E-118
2701959
3.50E-118
NM_100497
AT1G06160
2697781
1.50E-19
2696966
3.30E-17
NM_106151
AT1G74930
2683492
9.20E-22
2697080
2.00E-19
2684794
9.20E-18
NM_102998
NM_115498
AT1G3264
AT3G56400
no match
2694718
7.70E-25
NM_122387
AT5G24780
2682757
6.20E-19
NM_114383
NM_126272
AT3G45140
AT2G02120
2699231
2691399
0.00E+00
2.90E-12
2701122
2685561
0
2.90E-12
2688985
7.40E-12
NM_115103
AT3G52430
2696470
1.30E-08
NM_114678
AT3G48090
2696470
1.20E-26
NM_106129
NM_120063
AT1G74710
AT4G39030
no match
2699699
5.70E-65
2694520
2.00E-64
2676841
2.10E-39
NM_105102
NM_203015
NM_203016
AT1G75040
AT5G06950
AT5G06960
2683945
2698423
2698423
1.20E-49
6.30E-105
9.30E-100
2683636
1.80E-63
NM_101308
AT1G14410
2678976
2.00E-84
2694791
3.50E-83
2702559
1.20E-70
NM_101823
NM_127926
NM_119810
AT1G19670
AT2G23620
AT4G36470
2701562
2702088
2682405
3.50E-41
2.10E-52
2.80E-122
2693718
2683664
4.30E-36
9.80E-47
AtBSMT1 (JMT)
NM_101820
AT1G19640
2682405
3.50E-67
2676134
8.10E-39
NM_001203732
AT4G02570
2692745
8.60E-130
2701168
2.10E-108
NM_118557
AT4G24240
2678653
6.20E-38
NM_119299
AT4G31500
2695103
1.30E-128
2689454
2.20E-123
NM_128213
NM_100174
AT2G26560
AT1G02930
2700574
2680402
4.00E-69
1.60E-37
2695147
2682531
6.10E-65
1.60E-37
AtOPR3
jasmonic acid carboxyl
methyltransferase
AtCULLIN
cullin 1
A. thaliana systemic acquired resistance transcriptome
AtWRKY7
WRKY transcription factorlike calmodulin binding
protein
AtCYP83B1
CYTOCHROME P450
MONOOXYGENASE 83B1
auxin-responsive protein
AtPLA2A
AtGSTF6
phospholipase A 2A
glutathione S-transferase F6
2677540
2697742
2688985
2693718
2680100
4.20E-108
2695103
2700574
2689611
4.40E-42
1.60E-37
2700574
AtSAG21
AtGST11
AtPDC1
AtT17M13.13
AtERD1 (CLPD)
AtATRR2
AtTAT3
AtCSD1
AtCYP71B19
AtGDH1
AtGATA5
AtGSTF3
AtGSR1
AtCYP71B20
AtCNX1
AtRAB18
Isoflavonoid pathway
AtPAL1
AtPAL2
AtPAL3
At4CL1
AtC4H
AtTT4
AtTT5
WRKY33
AtWRKY33
Pisatin biosynthesis
Isoflavone reductase
senescence-associated protein
SAG21
GLUTATHIONE STRANSFERASE 11
pyruvate decarboxylase 1
RING/FYVE/PHD zinc
finger-containing protein
chaperone protein ClpD
response reactor 2
tyrosine aminotransferase 3
superoxide dismutase [CuZn]
cytochrome P450 71B19
glutamate dehydrogenase 1
GATA transcription factor 5
glutathione S-transferase F3
glutamine synthetase 1
cytochrome P450 71B20
calnexin 1
RAB GTPASE HOMOLOG
B18
NM_116471
AT4G02380
2692602
2.60E-10
NM_100173
AT1G02920
2680402
1.20E-39
NM_119461
NM_201677
AT4G33070
AT2G02960
2689300
2686867
0.00E+00
1.30E-50
2683675
0.00E+00
NM_124486
AK226519
NM_128044
NM_100757
AT5G51070
AT3G48100
AT2G24850
AT1G08830
2697303
2682483
2684841
2689619
0.00E+00
9.40E-34
6.90E-10
2.30E-85
2702251
0.00E+00
2676344
4.20E-85
NM_113524
NM_121822
NM_126030
NM_126346
NM_123119
NM_202635
NM_125573
NM_103516
AT3G26170
AT5G18170
AT5G66320
AT2G02930
AT5G37600
AT3G26180
AT5G61790
AT1G43890
2689454
2687856
4180569
2680402
2675644
2689454
2675550
2683623
3.10E-94
1.50E-163
5.60E-45
6.70E-37
0
1.50E-78
0.00E+00
5.30E-80
2695103
6.90E-78
4180486
2682531
2693453
2695103
2690037
2687404
5.20E-41
6.70E-37
0.00E+00
2.50E-72
0.00E+00
1.30E-78
phenylalanine ammonia-lyase
1
phenylalanine ammonia-lyase
2
phenylalanine ammonia-lyase
3
4-coumarate--CoA ligase 1
trans-cinnamate 4monooxygenase
chalcone synthase
chalcone--flavonone
isomerase 1
NM_129260
AT2G37040
2698451
0.00E+00
2694082
NM_115186
AT3G53260
2694082
0.00E+00
NM_120505
AT5G04230
2694082
NM_104046
NM_128601
AT1G51680
AT2G30490
NM_121396
NM_115370
WRKY DNA-BINDING
PROTEIN 33
NAD(P)H oxidoreductase,
isoflavone reductase
Sophorol reductase
Sophorol reductase
Hydroxymaackiain reductaseHydroxymaackiain reductase
Pterocarpan reductase
Pterocarpan reductase
2692602
2697303
2683190
4.20E-85
2689611
2702789
6.70E-37
0.00E+00
2697006
0.00E+00
0.00E+00
2693218
4.50E-119
2698451
0.00E+00
2693218
2.00E-125
0.00E+00
2698451
0.00E+00
2693218
3.10E-79
2697742
2679571
5.70E-65
0.00E+00
2682423
9.10E-104
2692534
4.30E-91
AT5G13930
AT3G55120
2692189
2676966
0.00E+00
3.40E-80
2698793
2686902
0.00E+00
2.40E-76
2692189
2.30E-123
NM_129404
AT2G38470
2702337
1.30E-29
mRNA accession (species)
AY080705 (A. thaliana )
AT4G39230
2676281
1.90E-146
2697275
9.40E-146
2692769
2701108
2697503
0.00E+00
0.00E+00
4.70E-88
2697469
2700937
2690913
0.00E+00
4.70E-55
1.80E-84
AF107404 (P. sativum )
no match
U69554 (P. sativum )
no match
AB265589 (Lotus japonicus ) no match
2676364
2697181
2702337
2685331
1.40E-56