bs_bs_banner Biological Journal of the Linnean Society, 2013, 109, 434–440. With 2 figures Relationship between canalization and developmental stability of foetal rabbit limbs in two reproductive toxicological experiments MATTEO BRENO*, JESSICA BOTS and STEFAN VAN DONGEN Evolutionary Ecology Group, Department of Biology, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium Received 19 November 2012; revised 10 January 2013; accepted for publication 10 January 2013 The mechanisms of developmental buffering and its relevance to the evolutionary process have recently attracted a lot of attention in both developmental and evolutionary biology. Among other things, whether the two components of developmental buffering [i.e. canalization and developmental stability (DS)] have a common basis has long been the subject of debate. In the present study, we examine the association between fluctuating asymmetry (i.e. the directionally random asymmetry of bilateral structures), a measure of DS, and between-individual variation of long bones in over 1000 rabbit foetuses. The lack of correlations between fluctuating asymmetry and between-individual variation at the individual, litter and treatment level, in combination with the absence of correspondence among covariance matrices, supports distinct developmental mechanisms for DS and canalization. We discuss our results in the context of recent insights into the mechanisms of developmental buffering. © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109, 434–440. ADDITIONAL KEYWORDS: fluctuating asymmetry – limb development. INTRODUCTION Developmental buffering or homeostasis is the ability to maintain a consistent phenotypic expression under perturbations of various origins (Debat & David, 2001). It is an important factor in evolutionary biology because it can restrict the variation upon which natural selection acts (Gibson & Dworkin, 2004; Flatt, 2005) and influences the adaptive accuracy of a trait (Hansen, Carter & Pelabon, 2006). The two main components of developmental buffering [canalization and developmental stability (DS)] are generally described to buffer variation of different origins and are identified by the patterns of variation that they represent (Willmore, Young & Richtsmeier, 2007). Canalization refers to the ability to modulate the amount of phenotypic variation in the presence of environmental or genetic perturbations, typically by reducing between-individual variation. The process of DS buffers against random perturbations arising *Corresponding author. E-mail: [email protected] 434 during development (i.e. developmental noise), hence reducing within-individual variation. Canalization is thus inferred by comparing levels and patterns of between-individual variation and DS by fluctuating asymmetry (FA) (i.e. random deviations from symmetry in symmetrical structures). A central research question is the relationship between canalization and DS (Hallgrimsson, Willmore & Hall, 2002; Willmore, Klingenberg & Hallgrimsson, 2005). Although canalization and DS represent different patterns of phenotypic variation (i.e. between and within individual variation resp.), it is not clear whether they share common developmental mechanisms. The covariation between the two components of developmental buffering has been investigated in many species with different approaches, although it has yielded heterogeneous results (Willmore et al., 2005, 2007; Breno, Leirs & Van Dongen, 2011). Generally, the link between DS and canalization is investigated by comparing amounts and patterns of FA and between-individual variation at various levels. Studies in insects often reveal associations between canalization and DS (Clarke, 1998; © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109, 434–440 CANALIZATION AND DS IN FOETAL LIMB Klingenberg & McIntyre, 1998; Klingenberg et al., 2001; Reale & Roff, 2003; Dworkin, 2005; Santos, Iriarte & Céspedes, 2005; Breuker, Patterson & Klingenberg, 2006; Debat et al., 2006, 2008; Debat, Debelle & Dworkin, 2009; Pélabon et al., 2010), whereas those in mammals are rather mixed (Debat et al., 2000; Hallgrimsson et al., 2002; Klingenberg, Mebus & Auffray, 2003; Willmore et al., 2005; Breno et al., 2011). Recent overviews of this literature are provided by Willmore et al. (2005) and Breno, Leirs & Van Dongen (2011). Because environmental conditions may affect both DS and canalization, their covariation should be assessed across multiple environments that are able to alter both (Hoffman & Woods, 2001). However, this approach is used less often and has also showed mixed results (Hoffman & Woods, 2001; Debat et al., 2006, 2009; Breno et al., 2011; Jojić, Blagojević & Vujošević, 2011). The present study aimed to investigate the relationship between canalization and DS in long bones from a sample of the New Zealand white rabbit (Oryctolagus cuniculus) foetuses bred under different levels of stress. We obtained data from two toxicological experiments aiming to assess the effect of two compounds on foetal toxicity. Because an increase in trait variation is expected in the presence of environmental stress (Willmore et al., 2007), we first investigated the effect of treatment on DS and canalization. In particular, if DS and canalization share a common mechanism, an increase in between-individual variation is expected for those traits that display the sharpest increase in FA. Therefore, we specifically addressed the relationship between FA and between-individual variation by correlating them across individuals and litters, within and across treatments. Thus, we aimed to assess not only the relationship between DS and canalization, but also the effect of environmental stress on such relationship. This last aspect is further investigated by comparing covariance matrices for FA and individual variation for each experiment and treatment. MATERIAL AND METHODS The animals were housed and maintained under Belgian regulations for animal health. The work was approved by the ethical committee for animal experimentation of Janssen Pharmaceutica NV in accordance with Belgian law. We obtained data from two toxicological experiments aimed at assessing the effect of two compounds (of which we cannot disclose the names as a result of company policy) on foetal toxicity. Pregnant females originated from a large outbreed population. 435 Compound A (experiment 1 below) is an antihyperglycaemic agent for the treatment of adults with diabetes type II. Its development has been stopped because of the lack of therapeutic effects in clinical trials and the compound is no longer produced. Compound B (experiment 2 below) is used for the prevention and treatment of coccidiosis in broiler chickens and growing turkeys. This anti-protozoal agent for veterinary use works locally in the gastrointestinal tract and has very limited systemic exposure. Each experiment comprises three treatments (100, 500, and 1500 mg kg-1 for the first experiment and 80, 320, 1280 mg kg-1 for the second one) and one control (0 mg kg-1 for both experiments; vehicle). A complete list of toxicological and teratological records regarding mother and litter status will be provided elsewhere (J. Bots, M. Breno, L. De Schaepdrijver & S. Van Dongen, unpubl. data; M. Breno, J. Bots, L. De Schaepdrijver & S. Van Dongen, unpubl. data). Doses were chosen such that the low dose is not toxic (i.e. in the pharmacological range), whereas, in the mediumand high-dose groups, toxicity is expected. Treatments were administrated daily during the period of organogenesis and limb development from day 6 up to day 18 of pregnancy. The females were killed on day 28 of pregnancy and a necropsy was performed. Foetuses were weighed and examined for external, visceral, and skeletal abnormalities. Compound A resulted in maternal toxicity in the groups receiving 500 and 1500 mg kg-1, as indicated by a decrease in body weight and food consumption (details not shown). Related to the maternal toxicity, lower foetal weights were recorded at term, as well as the incomplete ossification of several axial bones at skeletal examination. No major developmental abnormalities emerged. Compound B directly affected the development of the foetuses, with an increase in number of malformed foetuses in the high-dose group receiving 1280 mg kg-1 (details not shown). The most common developmental abnormalities involved nasal and frontal bones for the skull, reduced ossification of axial elements, the presence of a rudimentary or complete 13th rib, fused or rudimentary sternum, and reduced ossification of the pubis (M. Breno, J. Bots, L. De Schaepdrijver & S. Van Dongen, unpubl. data). None of the compounds directly affected limb development (details not shown), except for a reduced ossification of the tarsal bone in a few cases (approximately 3%). This work had been approved by the ethical committee for animal experimentation of Janssen Pharmaceutica NV. Foetuses were cleared and processed for bone staining with alizarine red. Digital images of limbs were taken in a standardized manner (Nikon D300s camera with a Sigma 105 mm macro lens), placing the bone parallel to the camera lens. Each individual © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109, 434–440 436 M. BRENO ET AL. Figure 1. Image depicting the fore- and hindlimbs of rabbit foetuses (dorsal view). Black bars represent the measured traits. was photographed twice after independent positioning, and each image was measured once or twice using IMAGEJ (Rasband, 1997–2011) (repeated measures of the same picture were taken for approximately 40% of the specimens). Six traits were studied for FA: humerus, ulna, radius, femur, tibia, and fibula linear lengths (diaphysis) (Fig. 1). In total, 1126 foetuses from 133 litters were digitized. Two operators (MB and JB) measured half of each dataset, and a preliminary analysis showed no difference as a result of operator (details not shown). As a result of damaged specimens, the final sample size ranged from 1018 for humerus to 1097 for radius. Unbiased FA estimates and trait size, corrected for measurement error and directional asymmetry, were extracted from a linear mixed regression model (Van Dongen, Molenberghs & Matthysen, 1999). To obtain measures of between-individual variation, trait size was modelled with treatment (four treatment groups: control, low, medium, and high) nested within experiment (two experiments: A and B) as fixed factors and litter as random effect. Absolute values of the residuals from this linear model were used as input for the canalization analysis (i.e. corrected size reflecting between-individual variation). Differences in canalization were tested using Levene’s test by submitting the absolute value of these residuals to a nested analysis of variance (ANOVA) (treatment nested within experiment) with litter as random intercept. The same analysis was performed on the unsigned FA to test for and compare the effect of treatment on FA and canalization. The relationship between canalization and DS was investigated in several ways. First, correlations between unsigned individual FA and absolute residuals were computed for each trait for the whole dataset. Second, correlations at the litter level were computed correcting for experiment and treatment effect. In this analysis, the absolute distance between average litter size and average treatment size was correlated with the average litter FA computed on residuals from a linear model where individual FAs were regressed on experiment and treatment. Finally, correlations between Levene statistics computed for each combination of experiment and treatment and average FA for the same groups were computed. Spearman’s rank correlations were preferred over Pearson’s productmoment coefficients because our analyses deal with absolute values. Next, sixteen variance–covariance matrices were computed for both FA and canalization corresponding to each of the experiment/treatment groups. The method of random skewers (Cheverud & Marroig, 2007) was used to estimate the similarities among the covariance matrices. In this approach, a random selection vector of length one, generated from a uniform distribution, was applied to both matrices. The resulting vectors are then compared by measuring the correlation (cosine) among them. The average correlation in response to 1000 random vectors was used to measure the similarity between two matrices. The significance of these correlations was assessed by the distribution of 10 000 correlations among random vectors of six elements. The idea behind random skewers methods is that, if two matrices are similar, the average response to selection is expected to be very close (i.e. the correlation between the two resulting vectors is one if the two matrices are equal). On the other hand, when two matrices are totally unrelated, the correlation between the resulting vectors is expected to be zero (Cheverud & Marroig, 2007). Finally a principal coordinate analysis, also known as multidimensional scaling, was applied to the pairwise distances among the sixteen matrices of the previous analysis. In this way, we constructed a graphical depiction of the relationships/similarities among these covariance matrices. The distance between two matrices was computed as the square root of the summed squared logarithms of the relative eigenvalues. This metric (Mitteroecker & Bookstein, 2008) represents the shortest path between two matrices in the proper space (Breno et al., 2011; Gonzalez, Hallgrimsson & Oyhenart, 2011). No relationship between trait size and FA was found, whereas analysis with residuals corrected for trait size yielded the same results. For this reason, we reported the results for sizeuncorrected analyses. All analyses were performed in R (R Development Core Team, 2011). RESULTS Table 1 shows the results of nested mixed ANOVA on residuals and FAs. The effect of experiment and treatment on variability was generally weak, with a nonsignificant reduction of phenotypic variation in © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109, 434–440 437 CANALIZATION AND DS IN FOETAL LIMB Table 1. Significance tests for the nested Levene’s test on between-individual variation in trait size and for the analysis of variance on unsigned fluctuating asymmetry for each trait Between-individual variation Within-individual variation (FA) Trait Experiment Treatment Experiment Treatment Humerus Ulna Radius Femur Tibia Fibula F1,124 = 0.003 F1,125 = 0.88 F1,125 = 0.24 F1,125 = 0.04 F1,124 = 0.16 F1,124 = 0.06 F6,124 = 1.5 F6,125 = 1.47 F6,125 = 1.67 F6,125 = 1.14 F6,124 = 0.72 F6,124 = 1.32 F1,124 = 11.25 F1,125 = 21.4 F1,125 = 0.85 F1,125 = 10.46 F1,124 = 0.12 F1,124 = 0.11 F6,124 = 0.94 F6,125 = 0.82 F6,125 = 2 F6,125 = 1.77 F6,124 = 0.36 F6,124 = 2.8 Values shown in bold are significant at P < 0.05. 0.01 0.03 0.05 0.06 -0.02 -0.01 0.02 0.04 -0.17 -0.30 -0.16 -0.07 -0.19 0.12 0.12 0.31 -0.31 0.31 2 Humerus Ulna Radius Femur Tibia Fibula 0 Treatment PCO2 Litter Values shown in bold are significant at P < 0.05. −2 Individual the high treatment of the second experiment (details not shown). The same analysis on within-individual variation (FA scores) revealed trait heterogeneity in response to experiment and treatment (Table 1). This heterogeneity appeared to be mainly a difference in response between hind- and forelimbs, where FA was higher in all treated groups of compound B but only in the hind limbs (details not shown; M. Breno, J. Bots, L. De Schaepdrijver & S. Van Dongen, unpubl. data). Table 2 shows the correlation coefficients at various levels. Correlations between unsigned FA and between-individual variation (i.e. absolute values of residuals of individual trait size corrected for experiment and treatment effects) and between average FA and Levene’s statistics at the litter level were all low and not significant, except for femur. Furthermore, correlations between FA and Levene statistics across treatment were all not significant, yet statistical power was low because correlations were based on eight data points only. Nevertheless, no consistent positive or negative correlation coefficients were found (Table 2). The results of the random skewer analysis are shown in Tables 3 and 4. The distribution of correlations among random vectors showed that coefficients −4 Trait 4 Table 2. Correlation coefficients between fluctuating asymmetry and phenotypic variation for each trait at individual, litter and treatment level control low medium high −4 exp1 exp2 CAN FA −2 0 2 4 PCO1 Figure 2. Principal coordinate analysis (PCO) on distances between covariance matrices of developmental stability (measured by fluctuating asymmetry; FA) and canalization (CAN). Open and filled symbol represent patterns of canalization and FA respectively. Experiments 1 and 2 are distinguished by black and grey symbols, respectively. The four treatments are: circle, control; square, low dose; triangle, medium dose; diamond, high dose. higher than 0.76 and 0.88 were significant at P < 0.05 and P < 0.01, respectively. All the covariance matrices for canalization were highly similar, displaying correlations > 0.9. Covariance matrices for signed FA were similar as well (except for one), although the correlations among them were lower than those for canalization (all but one > 0.80) (Table 3). Finally, none of the comparisons between canalization and FA matrices showed significant similarity (Table 4). The principal coordinate analysis yielded a highly comparable result (Fig. 2). The first axis (95% of © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109, 434–440 438 M. BRENO ET AL. Table 3. Random skewers analysis across covariance matrices associated with phenotypic variation (below the diagonal) and fluctuating asymmetry (above the diagonal) Control 1 Low 1 Medium 1 High 1 Control 2 Low 2 Medium 2 High 2 Control 1 Low 1 Medium 1 High 1 Control 2 Low 2 Medium 2 High 2 – 0.99 0.98 0.98 0.99 0.97 0.99 0.94 0.95 – 0.98 0.99 0.99 0.98 0.99 0.93 0.93 0.96 – 0.97 0.97 0.97 0.98 0.92 0.93 0.94 0.93 – 0.98 0.97 0.99 0.95 0.83 0.89 0.90 0.91 – 0.98 0.99 0.91 0.74 0.80 0.84 0.87 0.94 – 0.98 0.91 0.88 0.93 0.90 0.93 0.88 0.83 – 0.94 0.91 0.94 0.94 0.95 0.92 0.84 0.93 – Values shown in bold are significant at P < 0.05. 1, experiment 1; 2, experiment 2. Table 4. Random skewers analysis between phenotypic variation and fluctuating asymmetry Control 1 Low 1 Medium 1 High 1 Control 2 Low 2 Medium 2 High 2 Control 1 Low 1 Medium 1 High 1 Control 2 Low 2 Medium 2 High 2 0.52 0.54 0.53 0.49 0.54 0.44 0.55 0.53 0.49 0.51 0.52 0.48 0.53 0.45 0.55 0.50 0.49 0.50 0.50 0.45 0.49 0.40 0.53 0.50 0.53 0.55 0.57 0.51 0.54 0.45 0.58 0.54 0.48 0.51 0.50 0.46 0.50 0.42 0.52 0.49 0.48 0.50 0.49 0.43 0.48 0.39 0.50 0.46 0.51 0.55 0.54 0.48 0.53 0.44 0.55 0.52 0.64 0.70 0.72 0.66 0.71 0.62 0.72 0.69 1, experiment 1; 2, experiment 2. variation) showed a clear separation between the covariance matrixes for FA and canalization. Although the covariance matrices for canalization clustered together tightly (with a small exception for high treatment of the second experiment), the FA matrices tended to scatter along the second axis, which, however, contained a small amount of variation only (1%) (Fig. 2). DISCUSSION Investigating the link between developmental stability and canalization of rabbit foetal limbs yielded generally low and insignificant correlations between FA and individual variation at different levels. Not only the magnitude, but also the covariance matrices reflecting either canalization or developmental stability showed no correspondence. Because only two other studies investigated the relationship between DS and canalization in mammalian limbs (Hallgrimsson et al., 2002, 2003), drawing general conclusions is premature, especially considering the different methods used. In general, comparing patterns of variation may help to determine the mechanism involved in developmental buffering, in the sense that congruence between levels/patterns of FA and phenotypic variance leads to the conclusion of a common developmental basis (i.e. the robustness of the developmental system itself; Willmore et al., 2005; Breuker et al., 2006). A lack of such congruence implies distinct mechanisms and suggests, at least theoretically, that FA and phenotypic variance may evolve separately (Pélabon et al., 2004). Studies targeting specific molecular pathways have yielded a mix of results, often showing trait-specific effects. A common approach is to assess different patterns of variation after the alteration of the heat shock protein 90 (Hsp90), which is considered to represent a specific mechanism for canalization (Rutherford & Lindquist, 1998; Rutherford, 2000) An increase in phenotypic variation but not in FA was shown by Milton et al. (2003). Elevated FA and individual variation was observed after introgression of a mutated Hsp83 but not after pharmacological inhibition of hsp90 or two hsp83 mutations (Debat et al., 2006). Takahashi et al. (2010) found that four out of nine genes for Hsp played a role in developmental buffering with no significant correlations between FA and between-individual variation (except for one trait in males). Takahashi et al. (2011a) found that © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109, 434–440 CANALIZATION AND DS IN FOETAL LIMB Hsp70Ba may play a trait-specific role in canalization but not in DS in bristle number and wing size in females. Although mechanisms behind developmental buffering are still poorly understood, recent findings may provide new insights into the genetic control of buffering components. Takahashi et al. (2011b) identified over 90 genomic regions affecting FA in Drosphila melanogaster, suggesting the possibility for existence of trait-specific and trait-aspecific mechanisms. Debat et al. (2011) found that overexpression of the gene Cyclin G (Cyc G) in D. melanogaster led to a 40-fold increase in FA, showing that Cyc G is a good candidate for the genetic control of DS. Although the results from quantitative genetics analyses have reported some genetic control for the environmental components of phenotypic variation (Dworkin, 2005; Hill & Mulder, 2010), heritability estimates for FA are generally low and epistasis is assumed to play a major role in controlling FA (Leamy & Klingenberg, 2005; Pélabon et al., 2010; but see also Carter & Houle, 2011). Thus, in conclusion, in combination with the evidence reviewed above showing that, at least to some extent, DS and canalization have distinct molecular and genetic backgrounds, the lack of congruence between FA and between-individual variation in foetal rabbit limb bones adds to the growing evidence indicating that the two components of developmental homeostasis can be expected to evolve in different directions. ACKNOWLEDGEMENTS This work benefited from a research grant from the University of Antwerp (BOF-KP 4382). MB holds a PhD Fellowship from the Research Foundation – Flanders (FWO). JB is a postdoctoral fellow with the Research Foundation – Flanders (FWO). We thank Steven Gangestad for providing us with theoretical considerations. Luc De Bruyn provided valuable advice on taking photographs of the rabbit foetuses. We are indebted to Peter Delille and Luc De Schaepdrijver for providing us access to their samples, data, and facilities, as well as for technical help. We thank the editor and the reviewers for their comments on an early version of the manuscript. REFERENCES Breno M, Leirs H, Van Dongen S. 2011. No relationship between canalization and developmental stability of the skull in a natural population of Mastomys natalensis (Rodentia: Muridae). Biological Journal of The Linnean Society 104: 207–216. Breuker CJ, Patterson JS, Klingenberg CP. 2006. 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