Louisiana State University LSU Digital Commons LSU Historical Dissertations and Theses Graduate School 1971 Evidence for the Incorporation of Exogenous Dna by the Polytene Chromosomes of Living Drosophila Mojavensis Salivary Gland Cells in Shortterm Organ Culture. John Watkins Williams III Louisiana State University and Agricultural & Mechanical College Follow this and additional works at: http://digitalcommons.lsu.edu/gradschool_disstheses Recommended Citation Williams, John Watkins III, "Evidence for the Incorporation of Exogenous Dna by the Polytene Chromosomes of Living Drosophila Mojavensis Salivary Gland Cells in Shortterm Organ Culture." (1971). LSU Historical Dissertations and Theses. 2099. http://digitalcommons.lsu.edu/gradschool_disstheses/2099 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. 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"photographs" if essential to the understanding o f the Silver prints of "photographs" may be ordered at additional charge by writing the Order Department, giving the catalog number, title, author and specific pages y o u wish reproduced. University Microfilms 300 North Ze eb Road Ann Arbor, M ichigan 48106 A Xerox Education Com pany I I 72-3535 WILLIAMS, III, John Watkins, 1942EVIDENCE FOR THE INCORPORATION OF EXOGENOUS DNA BY THE POLYTENE CHRCMOSCMES OF LIVING DROSOPHILA MOJAVENSIS SALIVARY GLAND CELLS IN SFmTmrrrarajcruRE. The Louisiana State University and Agricultural and Mechanical College, Ph.D., 1971 Zoology University Microfilms, A XEROX Company, Ann Arbor, Michigan EVIDENCE FOR THE INCORPORATION OF EXOGENOUS DNA BY THE POLYTENE CHROMOSOMES OF LIVING DROSOPHILA MOJAVENSIS SALIVARY GLAND CELLS IN SHORT TERM ORGAN CULTURE A Dissertation Submitted to the Graduate Facultj' of the Louisiana State University and Agricultural and Mechanical College in partial fulfillment of the requirements for the degree of Doctor of Philosophy in The Department of Zoology and Physiology by John Watkins Williams, III B.S., University of Southwestern Louisiana, 1965 M.S., Louisiana State University, 1968 August, 1971 PLEASE NOTE: Some Pages have i n d i s t i n c t p rin t. Filmed as re c e iv e d . UNIVERSITY MICROFILMS ACKNOWLEDGEMENTS I wish to extend my appreciation to the graduate committee of the Department of Zoology and Physiology for my nomination for a Dissertation Year Fellowship. I also want to thank the Graduate School for awarding me the Fellowship. My sincerest thanks to Mr. Gary Eberle for his valuable assistance in preparing some of the photo graphs for this manuscript. To my wife, for her considera tion, assistance, and unending patience, I am most grateful. Most of all, I wish to thank my major professor, Dr. VJ. L. French, for his guidance, patience, and moral support during the course of this investigation and the preparation of this report. .ii TABLE 0]? CONTENTS Chapter Page TITLE P A G E ........................................ i A C K N O W L E D G M E N T S .................................. ii TABLE OP C O N T E N T S ............................. ill LIST OP T A B L E S ............. .'.................... LIST OF FIGURES ABSTRACT . . iv ............................. ............................. .. v . I N T R O D U C T I O N ...................................... vi 1 ............................... ............................... 3 17 METHODS AND M A T E R I A L S ............................. 31 In-vitro studies In-vivo studies Animals . .................................... DMA Extraction P r o c e d u r e s ..................... Purification T .................................. 3h -Labelling of D N A ........................... .................................... Chase DNA Culture Techniques ............................. Quantitative Techniques ....................... At-torad 1 ograph 1c T e c h n i q u e s ................... Acridlne Orange Tagged DNA .. . .............. Acrldlne Orange - DNAC u l t u r e s .................. R E S U L T S ............................................ 31 32 33 34 36 36 36 38 40 40 42 Extraction, Purification, ^Ii -Labelling .... 42 Quant 1 tat 1 ve Studies on DNA U p t a k e • 42 Aut or ad i o'graphi c S t u d i e s ......................... - 4 3 Acridine Orange - DNA Complex. Studies ........ 44 D I S C U S S I O N ........................................ 59 S U M M A R Y ............................................ 68 LITERATURE C I T E D .................................... ’ 70 V I T A ............................................... iii 79 LIST OF TABLES Table Page 1. The Treatment M e a n s ............ 54 2. Analysis of variance and orthogonal comparisons of the t r e a t m e n t s ............... 54 iv LIST OF FIGURES Figure 1. 2. 3. 4. 5. 6. 7. 8. 9. Page The U V absorption profile and II -label distribution of D. melanogaster nucleic acid MAK f r a c t i o n s ......................... 46 A comparison of the TCA soluble and insoluble fractions of 3h~DNA in Hank's solution with and without exposure to salivary glands . . . 48 A comparison of the ^H-labelled TCA soluble and insoluble fractions of the gland homogenates and the relationship of their size to the cells' total DNA content . . . . 50 Autoradiograph of chromosomes grown in the presence of 3H~labelled DNA for four hours . 52 Autoradiograph of chromosomes grown in the presence of 311-labelled DNA for four hours . 52 Chromosomes showing fluorescence of the incorporated acridine orange- DNA complex, . . 56 Chromosomes showing fluorescence of the incorporated acridine orange-DNA complex . . 56 Chromosomes showing fluorescence of the incorporated acridine orange-DNA complex . . 58 Acridine orange staining of an injured salivary gland c e l l ......................... v 58 ABSTRACT The existing genetic evidence on the incorporation of exogenous DNA suggests the chromosomal attachment of incorporated DNA. This study was designed to give direct evidence for the chromosomal incorporation of exogenous DNA. Autoradiographic and fluorescent studies show that the exogenous DNA is incorporated into the chromosome. The number of silver grains on the autoradiographs found over the chromosomes was four times above background. This is indicative of the chromosomal incorporation of the DNA. Both the autoradiographic and fluorescent data indi cate a non-localized chromosomal incorporatiop of the exogenous DUA. Quantitative studies shew that the amount of labelled DNA incorporated by the cells was more than twice the amount that could be incorporated by cellular DNA synthesis under the controlled cultural conditions. These results add support to the existing evidence for the genomic incorporation of exogenous DNA. Duplicates of the original manuscript are available from the Library, the Department of Zoology and Physiology, and Dr. W. L. French of the Department of Zoology and Physiology, Louisiana State University, Baton Rouge, Lou isiana. The photographs in these copies are in color. vi INTRODUCTION Griffith's discovery of bacterial transformation in 1928 stands as a landmark in the history of genetics. It not only demonstrated the transference of hereditary mater ials from one bacterium to another, but it laid founda tions for studies which led to the establishment of deoxyribonucleic acid (DNA) as the hereditary material. Subsequent work by Dawson and Sia (1 9 3 1 ) showed that transformation could be effected in a test tube. Alloway (1933) demonstrated that transformation could be accom plished by cell-free extracts. These studies led to an extensive systematic chemical analysis of the transforming substance by Avery, et al. (1 9 4 4 ). Their work demonstrated that the transforming material possessed all the properties of DNA. Enzymatic studies by McCarty and Avery (1946a and b) showed that only deoxyribonuclease (DN'ase) would de stroy the biological activity of the substance. These studies provided irrefutable evidence that the molecules involved in transformation we re DNA. Later experiments 32 showed the irreversible incorporation of J P labelled transforming DNA into a recipient bacterium (Goodal and Herriot, 19 57; Lerman and Tolmach, 1 9 5 7 )* Since the dis coveries by these early workers, bacterial transformation has become a relatively common tool of the bacteriologist. 1 2 DNA-mediated transformations in eukaryotes have been the subject of increasing numbers of investigations over the past fifteen years. Transformation of the eukaryotic cell or intact organism presents a situation considerably different from that encountered in bacteria. In the intact animal transforming molecules may move great distances from the point of entry and must cross several cell mem branes before reaching a desired point of interaction with the existing genome. Once this region is reached* the chromosomes encountered are much more complex than those of bacteria; their condition of strandedness is yet undetermined* and they are closely associated with several types of proteins. In addition to these difficulties* the transforming DNA also faces the possibility of attack by the organism’s defense mechanisms. Despite the apparent difficulties of eukaryotic transformation* evidence for specific genetic transformation of higher organisms is beginning to accumulate. In reviewing existing evidence for uptake and genetic function of exogenous nucleic acids emphasis is placed on »t . studies concerning DNA. The present literature on uptake of macromolecules may be divided into two major categories: those studies carried out on cells in culture and those conducted on intact living animals. Investigations in both of these areas have yielded important information on some basic questions facing geneticists today. Studies in-vitro have been more successful than those in vivo'. 3 This study presents a survey of current literature in both areas as well as original data on the chromosomal incor poration of exogenous DNA. I. In-vitro studies The technique of growing eukaryotic cells in chemi cally defined media provides an opportunity for geneticists to study incorporation of macromolecules by such cells under conditions similar to those existing in bacterial cultures. This approach not only provides a method for studying genetic transformations in the cells of higher organisms, but is also an efficient method of studying the chemical and physical mechanisms involved in uptake and incorpora tion of macromolecules. Such studies have yielded infor mation regarding the transformation of living cells, the rate of uptake, the approximate size of the incorporated DNA, the amount of DNA absorbed, the nature of the process of incorporation, the fate of the incorporated molecules, and the interaction of the DNA with the existing genome (Ledoux, 1965). A number of transformations warrant consideration. Krauss (1961) reported the successful transformation of bone marrow cells from a patient with sickle cell anemia. Individuals with sickle cell anemia produce a unique hemo globin polypeptide,^8 , DNA was extracted from cells ob tained from an individual who was homozygous for the gene coding for the normal/3 ^ polypeptide. Treatment of the /3s bone marrow cells with DNA extract from normal cells re sulted in transformation of the cells into ones capable of synthesis. Other early successful transformation studies also involved biochemical traits. Kantoch and Bang (1962) in duced susceptibility to a virus infection in mouse macro phages. There was some variation in the induced resistance, dependent on the length of the period of exposure and on the amount of DNA to which the cells were exposed. Szybalska and Szybalski (1962), working with IMP-pyrophosphorylase deficient human cells, effected a dosedependent transformation of these cells with DNA extracted from a cell line that was capable of synthesizing this enzyme. Transformation of these cells was inhibited by D N ’ase and by competition with DNA from other mammalian sources. Shepley, et al, (1965) altered the cellular morphology and clonal appearance of hamster cells by treating them with DNA or RNA extracted from hamster and rat kidney, polyoma-virus-transformed cells, stilboestrolinduced-kidney-tumor cells, and Bacillus subtllls. The greatest effects were achieved with nucleic acids from the chemically induced tumor cells. Degradation of nucleic, acids prior to incubation with the cells destroyed their transforming properties. Pope, et al. (1968) transformed normal human fetal leucocytes to ones resembling those from patients with leukemia or infectious mononucleosis by treating them with an extract from another human leucocyte cell line. The QJ.MR-WIL cell line, the source of the fil trate, carries a herpes-type virus in its genome. The physical properties, such as sedimentation values, of the isolated, heat and ether sensitive, transforming factor are compatible with those of the herpes virus carried in the QIMR-WIL line. In addition, Majumdar and Bose (1968) transformed an azathymine sensitive strain of human uvular carcinoma cells. The drug resistance was mediated by phenol extracted DNA from a resistant cell line derived from the same type of carcinoma. The authors theorized that the DNA probably replaces only one of the pair of alleles concerned with drug resistance; this theory is feasible if drug resistance is a dominant character. More sophisticated in-vitro transformation experi ments produced results which indicated new complex, enzyma tic action apparently dependent on the incorporated DNA. GTiclc and Salim (1967a) obtained a transformation of nonpigmented hamster cells. An amelanotic melanoma strain of hamster cells (AM5 ) was exposed to DNA from a melanotic melanoma cell line (MM2 ). Pigment production by the nor*i mally non-pigmented cells was indicative of transformation. The statistically significant level of transformation ob served was ten times as high as that obtained by Szybalska and Szybalski. Ottolenghi-Nightingale (1969) also obtained transformation of non-pigmented cells. The melanin gran ules were proof of the functional state of the incorporated DNA. 6 Brackett, et_ al. (19 71 ) obtained a unique type of transformation through the use of rabbit spermatozoa. The SV-4 0 virus genome was readily absorbed by spermatozoa in vitro. Autoradiographic data showed the incorporated ge nome was located in the postacrosomal area. The intact SV-4 0 virus also attached to the sperm cells but was not located by autoradiography. Enzyme digestion studies gave indications that the intact virus did not penetrate the spermatozoon, but remained attached to the surface. When sperm cells were exposed to either the SV-4 0 genome or the SV-4 0 virus and incubated with CV-1 cells, which are sen sitive to SV-4 0 virus infection, cytopathic effects were observed and the production of the SV-4 0 specific T-antigen was demonstrated. Microscopic observations showed that sperm cells penetrated the CV-1 cells. Sperm cells car rying the intact viruses effected the changes within 72 hr, while those cells carrying the genome alone took 12 days to initiate the phenotypic changes. In addition to these changes, infectious viruses were obtained from invaded cells. DNA-treated sperm cells were injected into the • >, uterine horns of a female rabbit in which ovulation .was induced and fertilization occurred. When these fertilized ova were cocultivated with CV-1 cells, cytopathic effects and the presence of T-antigen, specific to the SV-4 0 virus, were observed. Such results indicated that the viral genome was absorbed into sperm cells and1transferred via fertili zation to an ovum, where it reproduced. Bendich, et_ al. (1969) suggested that cellular trans formation was a possible mechanism for metastatic' spread of cancer. They accomplished the transfer of Ehrlich ascites tumor DNA from cell to cell as well as uptake of extracted Ehrlich ascites tumor cell DNA* moreover, uptake of entire L 1210 chromosomes by cells in-vitro was demon strated. cells. Specific antigens were detected in the transformed Passage of the specific antigen reactions through one hundred generations of cells indicated that the incor porated. DNA was being replicated and was capable of func tioning in protein synthesis. Observation of DNA incorporation indicates that the rate of uptake may vary among different cell lines. Sirotnak and Hutchingson (1959) detected very rapid uptake of DNA in L1210 cells that had been maintained intraperitoneally and exposed to P labelled DNA in vitro. Maxi mum uptake in eight day old cells was achieved in three minutes. Gl'ick (1967a) achieved similar results with this same cell line; the optimal rate of absorption was observed during the first five minutes. Studies with Ehrlich•1 Lettre/ ascites carcinoma cells (Meizel, 1 9 6 5 ; Meizel and Kay, 1965; Kay, 1966) showed that these cells achieve maxi mum absorption during the first 15 min.of incubation with exogenous DNA. Contrasting results were obtained with two other abnormal cell lines. Borenfreund’and Bendich (1961) in studying uptake of exogenous DNA by HeLa cells, observed 8 that the cells did not achieve maximum uptake until 24 hr after initiation of the culture. Hill and Spurna (1968), working with I. cells, obtained nucleolar labelling after 24 hr of incubation. From such reports, it seems that rates of incorporation of exogenous macromolecules may be a function which is dependent on the strain of cells in volved . If cellular transformation is to be accomplished, the incorporated DNA must be of a size that would allow for the coding of at ..least one new specific polypeptide. This requirement means that a fairly large piece of highly polymerized DNA must be absorbed by the cell. Transforma tion experiments indicate that incorporation of such large molecules takes place. Several studies have given more specific indications of the size of DNA molecules taken up by living cells. Gartler (19 59)* using H-labelled homologous DNA, showed that the amount of label incorporated by Henle cells, after 1 hr of culture, was not affected by competition with bases, nucleosides, or nucleotides; only excess cold DNA reduced the amount of incorporated label. He further demonstrated lack of DNA breakdown in the culture medium by alcoholic reprecipitation of the DNA remaining in the medium. In i960 Gartler, using Earle’s L cells tagged the donor DNA with both a radioactive molecule, cule, 5-bromo-deoxyuridine (5DBU); 14 C, and a heavy mole This technique per mitted separation of donor and recipient DNAs by CsCl centrifugation and provided a means of identification and characterization of each type of DNA. Any breakdown and recombination of the molecules would change both the la belling and density characteristics of the respective fractions. Very few changes were detected, indicating that the molecules were being absorbed in their macromolecular form. Yosida, e_t al. (1968) demonstrated that entire, iso lated rat metaphase chromosomes could be incorporated into embryonic mouse cells in vitro. The chromosomes usually showed some degradation but were easily recognizable in the metaphase configurations. While these studies did not indicate actual molecular sizes of the molecules incorporated, they showed that the molecules were large and were not totally destroyed and reutilized by the cells. Halpern, ei; al_. (1968) found that non-viral tumor growth was inhibited by DNA extracted from homologous tissues. Maximal inhibition was achieved with molecules of the sizes found in DEAE-cellulose (Diethylaminoethylcellulose) centrifuge chromotography Frac tions III and VI. The molecular weights of these fractions were 5 X lcA and 5 X 10^ respectively (Ledoux,. 1965)/. They also found that D N ’ase I treatment of Fraction VI enhanced its ability to inhibit tumor growth. Digestion of Fraction VI with D N ’ase I shifted the majority of remaining mole cules to Fraction III. DN'ase I treatment of Fraction III resulted in the loss of its inhibitory effect. The evi dence presented in these studies indicated that DNA 10 absorbed by cells was of a high molecular weight* at least h 5 X 10 * was highly polymerized* and maintained its struc ture during the process of entering the cell. If high molecular weight DNA is absorbed into a liv ing cell and specific phenotypic changes can be observed* then a substantial quantity of DNA must be entering the cell, A number of investigators have made attempts to measure the relative amount of exogenous DNA that can be taken up by a cell in vitro. Indications of the amount of DNA incorporated by a cell varied from a high of 10$ of the cell’s normal DNA compliment (Bendich* 1961 and Borenfreund and Bendich* 1961) in HeLa cells to a low of 2$ in L 1210 cells (Glick* 1967a). These quantities of DNA are large and should be sufficient to induce trans formation* as even 2$ of a mammalian cell’s genome would contain many genes. The exact method by which cells take in large macro molecules has been the subject of much speculation. most logical method would be pinocytosis. The While actual pinocytosis of DNA molecules has not been substantially demonstrated* information concerning the physical and chem ical factors controlling the process has been obtained. Bendich (1961) demonstrated that optimal uptake occurs at 3 7 °C in mammalian cells. Glick (1967a) also found that the process was temperature dependent. The data obtained by Meizel and Kay (1965)* Meizel ('1 9 6 5 )* Glick (1967a)* and Gibb and Kay (1968) indicated that uptake is energy- 11 dependent, optimally occurring at pH 7 « The general energy source for the reaction seemed to be glycolysis. Meizel and Kay (1965) a^d Warden and Thorne (1969) enhanced DNA t uptake by use of polycations, which increase pinocytosis. Ryser (1967)* reporting on uptake of protein by tumor cells, found that only polycations enhance protein incorporation by pinocytosis. Other environmental changes, such as an increase in glucose concentration or a lowering of pH, which stimulates pinocytosis in amoebae, result in cell destruction and a high degree of albumin fixation. These accounts all point to the probability.of pinocytosis as the mechanism of cellular uptake of DNA. reported pinocytosis of DNA in the cell growth. Adams (19 64) and S phases of HeLa While it appears that pinocytosis is the probable method of incorporation, further evidence is needed to validate this theory. Can a high molecular weight DNA fragment maintain molecular integrity in a culture of growing cells? it can, it may be absorbed by the cells. If After a large molecule, such as DNA, is incorporated into a living cell, *\ what happens to it? It seems that the invasion of'the' cell by a macromolecule would trigger the cell’s defense mechanisms against the invader. Possibly, this is what does happen to the DNA incor porated into the cells; at least one group of investigators has apparently found this to be the case. Bensch, et a l . (1966) reacted gelatin coated DNA with colloidal gold. 12 Electron microscope studies were made of L cells exposed to these particles. The DNA-protein particles were quickly phagocytized by the cells and lysosomal reaction with phagocytic vacuoles was demonstrated cytochemically. Dis persion of the bound colloidal gold as well as its clumping in ’’empty" vacuoles was observed. These results were in terpreted as demonstrating hydrolysis of the DNA, which would prevent any transformation reactions of the types previously described. However, many investigators disagree with the results obtained by Bensch. Hill (1962) tested extracellular break down of DNA in culture by growing cells in a culture cham ber divided by a diffusable membrane. One side contained •2 bone marrow cells and "H-labelled DNA from mouse lympho cytes and the other side contained only growing bone marrow cells. Label was found only in cells growing on the DNA containing side. Apparently there was not enough extracellular breakdown to permit degraded DNA to cross the membrane barrier and label the cells growing on the • other side. *i Kay (1961), Meizel and Kay (1965)^ Kay (1966), and Gibb and Kay (1968), utilizing labelled adenine and thy midine in exogenous DNA, compared the specific activities of the A/T ratio before and after cellular incorporation. If the exogenous DNA was being broken down and reutilized, labelled bases should be diluted and specific activity ratios altered. All studies showed that the specific 13 activity ratios remained fairly constant, which indicated the molecular integrity of the incorporated DNA. Gartler (i960) and Ayad (1968) utilized the differ ential CsCl centrifugation properties of labelled DNA containing heavy molecules, 5BDU (5 -bromo-deoxyuridine) and lUdR (5 -iodo-2 -deoxyuridine), to separate incorporated DNA from the endogenous DNA of recipient cells. In both cases they obtained a banding pattern which was indicative of intact incorporation of exogenous DNA. Doerfler (1968) showed that viral DNA was incorporated intact into the cell's genome by locating labelled viral DNA in the DNA fraction of baby hamster kidney cells. Gurdon, et al. (1969) injected various types of vertebrate DNA into the cytoplasm of anucleate eggs of Xenopus laevis. This DNA was allowed to replicate and was extracted and characterized. The newly replicated DNA was double stranded and had the same characteristics as the injected D N A s . The specificity of the replication was demonstrated by injecting ribosomal satelite DNA and then hybridizing the newly replicated DNA to r-KNA. Such *i . data conclusively show that exogenous DNA can be incor porated intact by a cell in culture and can utilize the existing cellular mechanisms for its replication and tran scription . If purified DNA can be incorporated by an intact growing cell, replicate, produce specific polypeptides, and be transmitted from one cell generation to the next, 14 it probably has some interrelationship with the cell’s own genome. There has been a considerable effort to deter mine the nature of this relationship and the action of incorporated DNA on the cell's synthesizing mechanisms. Direct visual evidence for interaction of exogenous DNA with the existing genome was presented by Leuchtenberger, et. al. ('1 9 5 8 )., Frederic., et al. (1962), and LutwakMann, et al. (1969). All observed chromosomal modifications in cells treated with DNA. Generally, these modifications assumed the appearance of chromosome damage resulting from breaks, arm exchanges, additions and deletions. These experiments employed high concentrations of DNA, as high as 0 .1$ in one case. The chromosomal modifications may be the results of non-genetic properties of the DNA solu tion. Gartler (i960) and Ayad and Fox (1968) provided more definitive evidence for interaction of absorbed DNA with the existing cell genome. In both experiments, donor DNAs were tagged with heavy molecules. CsCl centrifugation of the treated cell extract yielded a band of intermediate density. This fraction, after DN'ase treatment or Boni fication, was resolved into two peaks corresponding to the original DNA densities. This type of separation indi cated incorporation of a piece of heavy DNA into the linear configuration of the existing genome. Roth, et al, (1968) demonstrated an intimate relationship between absorbed DNA and the normal cell compliment. By measuring increases 15 in acroflavin-hydrochloride binding to nuclei of cells treated with exogenous DNA, and following the increase through subsequent generations, they determined that there was a statistically valid increase in the cells’ nuclear content. These data do not necessarily imply that exo genous DNA is integrated into the existing genome, but they do demonstrate incorporation into the nucleus, which would place the new DNA in close proximity to the existing genome. Djordjevic, et al. (1962) demonstrated replacement of an ultraviolet damaged genome with exogenous, isologous DNA. Treatment with DNA reduced the cell death rate from 50$ to less than 10$. Since ultraviolet treatment would not have destroyed the entire genome, these results indi cate an interaction between the incorporated DNA and the remaining undamaged genome. Kohan, et al. (1968) found that exogenous nucleic acids inhibited the production of a vaccina virus in in fected chorionic-allantoic membrane cells. Hal p e m , et al. (1966 and 1968) found that autogenous DNA inhibited the transplantibility of non-viral mammalian tumors. The inhibitory effect of the exogenous DNA was species speci fic. Only mouse DNA was effective,* rat and calf thymus DNA did not inhibit transplantibility of the tumor. Such specificity implied an interaction between DNA entering the cell and the endogenous D N A . Glick, at a l . presented information which gives some insight into the possible actions of exogenous DNA within 16 recipient cells. Exogenous DNA has a cytotoxic effect on L 1210 cells in a maintenance medium of phosphate-buffered saline and glucose. However, if cells were preincubated in a growth medium and then exposed to exogenous DNA, there was enhancement of cell viability (Glick, 1967b; Glick, 1970). While degradation of exogenous DNA was non-specific, the Inhibitory or cytotoxic effect was species specific and source specific (must be from normal cells), but not organ specific (Glick, 1967c; Glick and Salim, 1967b; Glick, Salim, and Crystal, 1968). Glick and Goldberg (1965, 1966) found that DNA treatment without preincuba tion reduced the tumor producing ability of L1210 cells injected into mice following DNA treatment. Crystal and Glick (1968), using synchronized cells, found that inhibition was not effective in the S or M phases of the cell cycle. Other studies showed that exo genous DNA is capable of stimulating DNA or RNA synthesis, but it inhibits uptake of nucleic acid precursors (Glick and Sahler, 1967; Mauer, et al., 1968). This indicates ' that incorporated DNA is capable of functioning as a part *t of the cell1s genome. Metabolic inhibition studies (Glick and Sahler, 1967) and temperature studies (Glick, 1967a) indicated that DNA must penetrate the cell in order to effect inhibition. Cell death may result from an KNA produced by the incor porated DNA. Glick (1967b, 1 9 7 0 ) also suggested that en hancement of cell viability under different incubation 17 conditions may result from an interaction between incor porated DNA and a substance secreted by the cells. Prom the evidence presented, it appears that eukary otic cells growing in tissue culture are capable of ab sorbing high molecular weight DNA without excessive degra dation of the molecules. After incorporation, exogenous DNA moves to the nucleus, where it is replicated and tran scribed. While it is evident that there are physiological interactions between incorporated and endogenous DNA, evi dence for linear.integration of exogenous DNA into the existing genome is not conclusive. Evidence for such action can be obtained by recombination and genetic studies of eukaryotic cells. At present, such studies are best achieved in intact animals. II. In-vivo studies The In-vitro studies already discussed provided information concerning uptake of DNA by eukaryotic cells. However, occurrences in tissue culture cannot always be applied to intact organisms. In an animal or plant, macro molecules face a very effective defense system developed over many years of evolution. The methods of introducing exogenous DNA into the intact organism are of great impor tance. In addition, various stages in an organism’s life cycle offer different problems and opportunities for the incorporation of exogenous DNA. 18 The ultimate goal of uptake studies is transforma tion of specific genes along directed lines. Experiments on intact organisms offer information on other aspects of DNA uptake such as its fate, its destination within the cell, and its replicative and synthetic activities. The few successful attempts at in-vivo transformation have permitted genetic investigations which yielded much information on the relationship of the incorporated DNA to the endogenous genome. There are few feasible ways of introducing a macro molecule into a whole organism. One method is to treat an organism when it consists of one, or a fairly small number of cells, such as a germinating plant seed or an early embryo of an animal. Under such conditions, the organism may be exposed to exogenous DNA directly by soak ing; it may be injected; or it may be perfused. If non- embryonic stages of an organism are involved, DNA must either be injected into or fed to the organism. The prob ability of absorption of DNA through the "skin" of an in tact organism seems remote. This is especially true of »», mammals and insects, the two animal groups most commonly used in such experiments. If exogenous DNA is introduced by injection or feeding, it must exist in a hostile environment for a period of time before entering the cell. Both the circulatory and diges tive systems possess enzymes which should actively degrade DNA. This is particularly true of the digestive system; 19 consequentI3' there have been very few attempts at trans formation by feeding of exogenous DNA. Injection is the most popular and perhaps most effective means of intro ducing DNA into an intact organism. There are several methods which are employed in injecting exogenous DNA into animals. In vertebrates the most widely used method is intravenous injection which places exogenous DNA directly into the blood stream. Here it can be quickly distributed to the various organs which can absorb and utilize it. Intraperitoneal injection of mammals has been attempted and is the method of choice with insects because it places the DNA in the haemocoel, where it can be distributed throughout the organism. The third possible method of injection, intramuscular, has not been frequently used. Studies by Ledoux, et a_l. showed that exogenous DNA rapidly disappears from the blood stream of mice. Within 1 hr after injection, the DNA disappeared from the blood stream and was located primarily in organs of the genital' tract, particularly in the ovaries and vaginae. The DNA found in the cells represented 4 - 6°/o of the cellular DNA content (Ledoux, 1 9 6 5 ; Ledoux, at al., 19&7 )* Injection of pregnant mice with E. coll DNA showed incorporation of the DNA in the growing embryos within twenty-four hours. The DNA was not significantly degraded, having survived transit in the blood stream as well as passage through placental membranes (Ledoux and Charles, 1967). 20 Rusinova, et al. (1969) traced the fate of exogenous DNA in rats after both intravenous and intraperitoneal injection. DNA rapidly left the blood stream and was preferentially incorporated by the bone marrow. DNA in jected abdominally was not incorporated effectively. After 24 hi’ some DNA remained in the abdominal cavity and much of it was degraded. Vielkind and Vielkind (1971) observed the fate of bacterial DNA following injection into yolk of fish embryos. It was their opinion that the bacterial DNA was broken down and resynthesized into fish DNA. DNA injected into the yolk of a growing embryo was exposed to digestive enzymes which caused degradation of the in jected DNA. Apparently DNA injected directly into the circulatory system is absorbed into the tissues before circulating DN'ases can act on it. However, abdominally injected DNA encounters difficulty in entering the blood stream and is subjected to degradation. Direct exposure of nucleic acids to digestive processes also result in their degradation. The study of DNA incorporation into intact organisms has been facilitated by using embryonic and larval stages of developing animals and plants. Prom such studies we have learned much concerning the fate of incorporated DNA, its ultimate site of cellular incorporation, and its ability to replicate and direct cellular synthesis. Yamada and Nawa (1967, 3968,' 1969) studied the fate of bacterial ^H-DNA incorporated into Ephestia eggs by 21 soaking the eggs in DNA containing solution. They utilized DEAE-cellulose centrifuge chromotography and CsCl density gradient centrifugation to determine the degree of polymer ization and molecular weight of respective DNA fractions, and to differentiate between bacterial and endogenous DNA. They found that the amount of DNA incorporated was both time and concentration dependent and that after ultracentrifuga tion the incorporated DNA banded in a different position than endogenous DNA. After 6 hr of incubation there was a shift in molecular weight of the incorporated DNA. In samples incubated in the DNA solution for two and four hour periods, the molecular weight of the incorporated DNA was about 1 X 10^ - 5 X 10^. In 6 hr samples the size 4 had decreased to 5 X 10 . There was no label in the low molecular weight fractions. They also found that 15 hr after treatment some bacterial DNA had been denatured. Together, these data implied that the exogenous DNA was rapidly incorporated in a high molecular weight state without depolymerization. Ledoux, et_ al. used similar techniques to elucidate the fate of exogenous DNA in plant tissue (Ledoux and Huart, 1968, 1969; Stroun, et_ 1967). Utilizing simi lar centrifugation techniques, they found that germinating barley roots and tomato shoots incorporated highly polymer ized DNA. In addition they encountered an intermediate band, which, denaturation and soni'cation studies showed, apparently represented linear Incorporation of exogenous 22 DNA into the existing genome. The model proposed closely resembles the incorporation of exogenous DNA into a bac terial genome. Gibson (1968) determined that Paramecium is capable of ingesting pieces of DNA and incorporating them into the macronucleus. Competition studies showed that the DNA was incorporated intact, rather than being broken down and reincorporated. This was further substantiated by centri fugation studies utilizing incorporation of heavy isotopes into donor DNA. However, he was unable to effect any transformation of specific genes. Desai (1970) injected 3H-DNA from E. coli into larvae, of D. melanogaster and Chironomus thummi. five hours, After four to label was found in the nuclei of the salivary gland cells, specifically over the band regions of polytene Op chromosomes. Hill (1961) observed incorporation of P-DNA into nuclei of bone marrow cells of irradiated mice fol lowing injection of homologous lymphocytes containing 32P-DNA. The information presented thus far supports the idea that an intact organism can incorporate large macromole cules, particularly DNA, into its cells. However, no information on the biological activity of these incorpo rated molecules has been presented. Evidence for biological activity of incorporated DNA comes from a few reports of successful, directed, genetic alteration of intact tissues and animals. Lemperle (1968) 23 achieved prolonged survival of skin allografts by incuba tion with recipient DNA or RNA prior to transplantation. He suggested that absorbed recipient nucleic acids were active in protein synthesis in the transplanted tissue and thus made it more antigenically acceptable to the recipient. Graffi, et^ al. (1969) induced lymphoma or leukemia in hamsters of a strain free from skin epitheli omas with DNA extracted from viral induced epitheliomas. These data illustrated biological functions of incorpora ted DNA. Successful transformation of easily visualized phe notypic traits has only recently been accomplished in intact eukaryotic organisms. Earlier reports employed methods of introducing the exogenous DNA into the animal which make the results questionable while other researchers have obtained results indicating that DNA is mutagenic. The original transformation of a higher animal was carried out by Benoit, et al. (1957) • By daily injection of small amounts of DNA from Khaki-Campbell ducks into young Peking ducks, they effected several phenotypic chan•» ges. However, subsequent attempts to duplicate this ex periment failed. Subsequent attempts at ln-vlvo transformation of eukaryotic animals have been generally unsuccessful. In addition, Drosophila experiments have indicated that DNA is mutagenic in vivo. Fahmy and tfahmy (1962) induced "minute" mutations by injection of adult Drosophila males with DNA. They were not able to induce production of recessive lethals by this treatment. In 1965* they repor ted induction of point mutations at the garnet locus by .DNA treatment. These mutations occurred with about the same frequency as those induced by X-irradiation. Small pieces of DNA were most effective and there appeared to be a dose response. Pluorsheim (1962a, 1.962b) observed a cytotoxic effect of DNA on mice injected with homologous cells previously treated with DNA to enhance their histo compatibility . Martinovitch, et_ al. (1962) observed teratological changes in offspring of chickens which, as embryos, had been treated with exogenous DNA. The results of the exper iment are questionable because the carrier solution, Tyrode is capable of inducing this type of effect. There was, however, a dose response to the quantity of DNA in the injections. Mathew (1965) demonstrated induction of recessive lethals by treatment with DNA. However, the procedure con sisted of feeding calf thymus DNA to D. melanogaster larvae This method of introducing exogenous DNA into an intact organism is not the method of choice. Exposure of high molecular weight DNA to the conditions existing in Drosophila culture almost certainly results in degradation of the molecules. Gershenzon (1966) reported on specific DNA directed mutations achieved in' this manner. Because of almost certain degradation of the DNA, both studies are probably reporting the genetic effects of DNA breakdown products: bases* nucleosides* nucleotides* ar.d oligonu cleotides . Nawa reported DNA-mediated transformation of specific phenotypic characteristics in two insects* Epliestia* a moth* and Bombyx* the silk worm. The early works of Nawa and Yamada were carried out on Ephestla* involving treat ment of both eggs and larvae. Nawa (19S 5 ) attempted to transform scale color of the forewing of Ephestia. A mu tant having scales lacking black pigment was used as a recipient. DNA was obtained from both wild type* 2<yfo black scales, and mutant strain* 100fo black scales. Larvae were injected and* following metamorphosis* forewing scales wer*e examined. Very few transformed scales were found. Nawa concluded that transformation was an individual scale effect. In 1966, Nawa and Yamada reported the change of an eye color* mutant in Ephestia. They reported establishment of breeding stocks of transformed animals as well as segre gation of the transformed genes and the biochemical nature •\ of the trait. The following discussion is a summary of those findings (Nawa and Yamada* 1966* 1967» 1968a* and 1968b). Red eye color is based on the lack of the enzyme tryptophan pyrrolase and is a recessive trait. Eggs and larvae from homozygous recessive*'red-eyed* moths were treated with DNA extracted from homozygous dominant* black- 26 eyed moths. One black-eyed individual was obtained from the treated generation. The "non-transformed" individuals were backcrossed to homozygous recessives and gave six black-eyed offspring in the next generation and nine in the subsequent generation. These transformed individuals were again backcrossed to achieve segregation. Segrega tion of the transformed genes gave several abnormal patterns. Some individuals appeared to be .heterozygotes as expected. Others segregated as if they were homozygous for the gene; this is abnormal in such a cross. The mutant female found in the treated generation also gave an odd type of segre gation. These two cases are most easily interpreted on the basis of the incorporated DNA existing as an episome which might be lost in some germ cells. Another individual showed a segregation pattern indicative of mosaicism. In order to determine whether the incorporated DNA was being read or whether a small mutation had occurred which would allow activation of the tryptophan pyrrolase enzyme., Nawa subjected a mixture of wild enzyme and enzyme extracted • from transformed animals to starch gel electrophoresis. »\ Only one band was distinguishable, indicating that the amino acid sequences of the two enzymes were very similar. More recently, Nawa, et_ al. (1969* 1971) effected a DNA mediated transformation in Bombyx. The results obtained were similar to those in Ephestia and illustrated aberrant types of segregation. These data'indicate that transfor mation does occur, but leave questions concerning the 27 actual relationship between incorporated DNA and the existing genome. Fox and Yoon described specific genetic effects of DNA in .Drosophila.. They applied very specific genetic tests, which can be carried out with this organism, to elucidate the relationship of incorporated exogenous DNA to the existing genome. More recently, Fox, et_ al. pro posed a model to illustrate this relationship. In I966, Fox and Yoon reported on specific changes induced in Drosophila by DNA extracted from stocks carry ing alternate alleles to the treated stock. They effected changes from recessive to dominant and from dominant to recessive by treating eggs of a particular stock with the appropriate DNA. No whole body transformations were obtained; only mosaics were observed. The authors postu lated that the changes might be due to a heritable insta bility in the chromosome. Fox, et al. (1968). raised the question of whether or not the locus specific effects of DNA in Drosophila involved its integration into the linear order of the chromosome. *\ Changes from dominant alleles to recessives indicated that a replacement of the endogenous allele was necessary. How ever, continued lack of whole body transformations does not fit this theory. In 1970, Fox, et_ al. began a series of papers which appeared to answer these questions' (Fox and Yoon, 1970] Fox, et a l ., 1970] Fox, et al., 1971). They accomplished transformation of a number of genes on both the X and Third chromosomes and established fifty-one breeding stocks of v+ (the normal allele of the vermillion locus) trans formed animals. type. The transformations were all of the mosaic Even after a large number of generations, the traits still appeared as mosaics. Attempts to induce chromosome integration, hence production of whole body transformations, by X-irradiation were unsuccessful. Mapping of incorporated genes by genetic crosses showed that, in two of the three tested stocks, alteration has occurred at the v+ locus. In the third, it was pos sible that the phenotype produced involved a change in a non-specific supressor mutation. In addition, distribu tion of transformed traits followed distribution of the target chi’omosome immediately after treatment. no apparent delay in chromosomal attachment. There was These obser vations led Pox. to propose an "exosome" model of chromo somal relationship. That is, the exogenous DNA attached to the existing chromosome with specific gene for gene pairing, but remained outside of the linear structure of »» the chromosome. It was capable of replication along'with the existing genes, but did not replace them. It was transmitted through the mitotic and melotic processes as if part of the chromosome. At transcription, only one of the alleles on that chromosome was read and results in mosaicism. Loss of this exogenous' segment might occur, as evidenced by the occasional appearance of a non- 29 transformed individual in the breeding stocks. In general, P o x ’s theory seems to explain adequately the results obtained in his laboratory and makes some of N a w a ’s results understandable. This is possible because both are working with an eye color mutant that is depen dent on a particular enzyme which can produce the required phenotypes without being produced by every cell in the body. From the data presented in' this discussion, it ap pears that transformation of eukaryotic cells and intact organisms is possible. Direct and indirect testing indi cated that DNA can enter a cell intact, even after dis tribution by the circulatory system. Once inside the cell, it is incorporated into the nucleus in close association with the existing chromatin. Genetic tests indicated that incorporated DNA is associated with the chromosomes and that it, in fact, attaches at the site containing its allele. The purpose of this study was to demonstrate directly chromosomal incorporation of exogenous DNA. A test system utilizing short term organ culture of intact salivary glands was employed. Salivary glands from D. mojavensis larvae were exposed to labelled D. melanogaster DNA. The amount of DNA incorporated into the cells was quantitated. Autoradiographic and fluorescent techniques were used to visualize the sites of incorporation. 30 Short terra organ culture allows direct exposure of the cells to exogenous DNA and minimizes extracellular degradation of the molecules. The cells employed remain in a highly differentiated condition and retain their histological integrity. Salivary gland cells of Drosophila larvae contain specialized interphase chromosomes. These large chromosomes exhibit a high degree of polyteny and are easily visible with light microscopy. Such tissues provide an excellent system for demonstrating the chromo somal incorporation of exogenous DNA.. METHODS AMD MATERIALS Animals Breeding populations of two species of Drosophila, Drosophila mojavensis and Drosophila melanogaster, were maintained on standard corn meal - agar medium at room temperature (22°C). The adults of both strains were transferred to new medium two or three times each week and the larvae were fed daily on Fleischmann's Active Dry Yeast. The D. mojavensis adults were purchased from Carolina Biological Supply Company, Burlington, North Carolina, and a strain of Oregon-R D. melanogaster was obtained from Dr. W. R. Lee's laboratory, Louisiana State University, Baton Rouge, Louisiana. D. melanogaster females were allowed to lay eggs on c o m meal - agar medium for a period of 12 hr before being removed. Hatched larvae were maintained until the majority reached the third instar stage of development. At this time, the larvae were floated from the medium with a 30$ sucrose solution, transferred to a large sep aratory funnel and washed with increasing dilutions of the sucrose solution until they were free of the medium. The larvae were washed into a Buchner Funnel and rinsed several times with water. The clean, living larvae were weighed and frozen with liquid nitrogen. 31 32 DNA Extraction Procedures Labelled and non-'labelled DNA was obtained by an extraction procedure which has been developed in this laboratory over a number of years and which produces an excellent yield of deproteinized nucleic acids (French, per. com.). All procedu.res were carried out in glass containers at 0° - 4°C. Frozen Drosophila larvae were ground to a fine powder in liquid nitrogen using a motar and pestle. The ground tissue was suspended in 0.7M NaCl that contained 0.015M Na^ C^H^O^ and 0.001$ Heparin at pH 7.4 (15ml/ 4g tissue). The suspension was placed in a glass .stoppered flask with an equal, volume of phenol, saturated with the above saline solution. The mixture was shaken for 30min and centrifuged at 12,500 g (20min) in a Servall RC 2 Refrigerated Centrifuge. After removing the saline supernatant, the interphase and phenol layers were mixed with another equal volume of saline and centri fuged as before. .The two nucleic acid containing saline supernatants were pooled and were extracted twice with equal volumes of saline saturated phenol. Following this, the saline layer was extracted twice with an equal volume of chloroform-isoamyl alcohol, 24:1 (V/V). The mixture was then shaken for lOmin-and then centrifuged at 10,000 g to separate the phases. The nucleic acids were precipi tated by slow addition of two volumes of cold, -20°C, absolute ethanol to the saline solution, 0°C. The pre cipitate was allowed to form overnight at -20° C . 33 Precipitated nucleic acids were collected by centrifuga tion at 10,000 g for 10 rnin and dried by vacuum dessication prior to purification. Purification The dried nucleic acid precipitates were dissolved in 0.1M NaCl buffered with 0.05M sodium phosphate at pH 6 .7 . The nucleic acids were loaded on a modified MAK column, methylated albumin on Kieselguhr (Osawa, 1967), and fractionated by stepwise elution at 38°C. A MAK column was prepared by boiling Ig of cellulose powder in 10ml of~buffered 0.1M N a C l . After cooling, this slurry was poured into a 15mm diam jacketed Glenco glass chromatographic column. This cellulose layer prevents blockage of the fritted glass disc at the bottom of the column. Ten grams of washed Kieselguhr was boiled in 50ml of the buffered saline solution for 20min, cooled to room temperature and mixed with 2.5ml of albumin. Vfo methylated This slurry was poured into the column without disturbing the cellulose layer. under 3 psi. This MAK layer was packed A layer of buffered saline was maintained above the packed layer to prevent contact with the air. The column was then topped with a layer composed of Ig of Kieselguhr boiled in 10ml of the buffered 0.1M NaCl solution and a filter paper disc. Nucleic acid fractionation was accomplished by loading the MAK column with approximately 7mg of nucleic 34 acids in 25ml of buffered 0.1M NaCl. This volume was passed onto the column at a flow rate of lml/min. Following the loading of the column, it was washed with 100ml of the 0.1M buffered saline at a flow rate of 3ml/min to remove nucleotides and other low molecular weight materials. washes of: This wash was followed by 200ml aliquot 0.45M NaCl, O. 65M NaCl, and 1.2M NaCl, all buffered to pH 6.7 with 0.05M sodium phosphate. These saline concentrations will elute the 4s and 5s RNA, the DNA, and the l8s and 28s RNA respectively. All elutions from the column were collected in 5ml fractions using a Canal Company automatic fraction collector equipped with a drop counter. The ultraviolet absorption elution profile was monitored by a Coleman Hitachi 101 Spectro photometer equipped with a continuous flow cell,X = 260nm. The elution profile was continuously recorded by a Beckman recorder. All DNA used in this study was prepared in this manner. %-LabeIling of DNA Tritium labelling of the DNA was accomplished by modification of the method described by Hitossa and Spiegelman (1965). D. melanogaster eggs were collected after l4hr of egg deposition on corn meal - agar medium plated in petri dishes. paper and rinsed with The eggs were washed onto filter ’’ (Ofi ethanol. The filter paper was cut into small pieces and placed in culture vials. Each vial contained: Ig corn meal, lg sucrose, lg bakers yeast, O.lg Bacteria grade U.S.P. agar, dissolved in 10ml HgO and boiled for 45min., Following boiling, the 3 vials were inoculated with Imc of H-Thymidine in 0,2ml sterile II^O (Miles Laboratories). The larvae were main tained in these vials until they reached third instar, then floated with 30f sucrose, and frozen for DNA extrac tion. This labelling procedure yielded 9-2g of larvae 3 which had incorporated H-Thymidine into their D N A . The DNA from these larvae was extracted by the procedure described above and purified by MAK fractiona tion. Following MAK fractionation, the DNA peak was sub jected to RNAase digestion, 4hr at 37°C. The RNAase was treated at 100°C for 10 min at pH 3 in order to destroy other enzymes and was added to give a final concentration of 150^g/ml. solution if The enzyme was denatured by making' the with sodium dodecyl sulfate (SDS) and shaking for lOmin at 45°C. The denatured proteins were removed by two successive extractions with water saturated phenol' followed by two extractions with chloroform-isoamyl alco hol. DNA was then precipitated by slow addition of two volumes of absolute ethanol (-20°C). The precipitate was allowed to form overnight in a freezer (-20°C) and was collected by centrifugation. Following vacuum desiccation at -20°C, it was dissolved in sterile Hank's balanced salt solution (Harnden, 1965), pH 6 .9 , 'to give a final concen tration of 60/jg/ml. The specific activity of the DNA was 36 r/lcpm^g. Parity of the preparation was determined by spectral analysis using a Beckman DBG grating spectropho tometer with X varying from 300nm to 220nm. Chase DNA Commercial salmon sperm DNA was MAK fractionated, precipitated, and dissolved in Hank's solution at a final concentration of Img/rnl. Culture Techniques Late third instar larvae of D. mojavensis were selected from actively growing stocks. Each larva was washed in three changes of 70%> ethanol, followed by two changes of sterile Hank's solution. Salivary glands were pulled into a drop of saline and stripped of excess tissue. The glands were rinsed twice in fresh saline solution and transferred by pipette to sterile 0.5ml depression slides containing 0.4ml of tagged DNA solution and covered with a siliconized coverslip. After 45 min of incubation, 0.1ml of Hank's with chase DNA was added. After 4hrs expo sure to exogenous DNA, the glands were removed and rinsed »; in two changes of Hank's solution, and either homogenized for scintillation counting or prepared for microscopic observation. Quantitative Techniques An estimation of the amount of DNA incorporated by the living glands was accomplished by homogenizing ten pairs or glands in 0.5ml of cold 5$ TCA (trichloroacetic acid) . This homogenate was mlllipore filtered (pore size The filter was washed with two volumes of cold TCA and digested in 0.2ml perchloric acid / HgOg. The filter digest and 0.2ml of filtrate were placed in sepa rate scintillation cocktails containing 4ml of 2-ethoxyethanol, and 10ml of fluor (lOg PDB in 1L toluene). The cocktails were counted in a Beckman liquid scintillation counter. Vfo Each sample was counted for 50min or until a error was rea.ched. The medium was removed from t h e .culture chambers and filtered in the manner previously described. The filter was washed with two volumes of cold TCA. Scin tillation cocktails were prepared as described above. Controls were prepared by holding 0 Jbml of the ^H-DNA solution with 0.1ml of salmon sperm DNA solution' in cul ture chambers without salivary glands. The controls were treated in the same manner as the medium from the experi mental cultures. The DNA synthesizing ability of the salivary glands it.was tested by preparing a culture medium containing free thymidine in the same quantity (71.9/<g/ml) and with the same specific activity (ll^cpm^g) as would have existed in the culture medium if the DNA was completely degraded. %-Thymidine (Miles Laboratories) was purified by ascending thin layer chromatography (Randerath and Randerath, 1967), using methanol: IICl: IigO (7 0 : 20: 10) as a solvent. The 38 -Thymidine spots were eluted onto acid washed Whatman chromatographic paper wicks with 0.1N HC1. Dried wicks were cut into small pieces and eluted overnight with H a n k ’s. The solution was centrifuged at 5*000 g for lOmin for separation of paper debris. The supernatant solution was removed and the specific activity was determined. Non labelled thymidine (Car. Bio. Chem.) was used to prepare a solution of H a n k ’s containing 71.3/tg of thymidine/ml. The final concentration of the thymidine was determined spectrophotometrically. An aliquot of the ^H-Thymidine was added to this solution in order to achieve a specific activity of ll4cpm^ug. Glands were maintained for 4hrs in this medium. Autoradiographic Techniques Salivary glands from third instar larvae were main tained in H-DNA containing cultures. After 4 hrs the ’ * , glands were removed and washed in H a n k ’s solution. Stan . dard chromosome squashes were made in cold 45^ acetic acid buffered to pH 2.2 with sodium acetate. The coverslips were removed by freezing in liquid nitrogen. The slides were washed in three changes of cold TCA, air dried, and covered with Kodak AR-10 stripping film (Schmid, 1965). The slides were air dried overnight, placed in bakalite slide boxes containing a silica gel dessicant and triple wrapped in aluminum foil and stored at 4°C. times were set at four and six weeks. Exposure Autoradiographic controls were prepared by maintaining the glands in nonDNA containing medium. After exposure, the slides were removed from the storage boxes, and the backs were painted with clear fingernail polish to secure the autoradiographic film to the slides. The autoradiographs were developed in Kodak D-19b, 6min at l8°C; washed in water, 30sec; fixed in Kodak Acid Fixer, lOmin; washed in Best Products indus tries #30 Hypo Eliminator, 2min; washed in running water, lOmin; and air dried. The slides were stained with dilute buffered Giemsa, ^-min; dipped twice in distilled water; and air dried (Schmid, 1965). Following clearing in two changes of xylene, lmin each, the preparations were moun ted with Permount and a #1 coverslip. "'The preparations were observed with a Leitz Ortholux. microscope using bright field optics at approximately lOOOx magnification and the silver grains over the chro mosomes were counted. Background levels were determined by counting an area immediately adjacent to the chromo somes. Background grains were counted if they occurred • 1. within two chromosome widths on either side of the chro mosome . The total count was divided by four* in order to arrive at a figure that represented background in an area approximating that occupied by the chromosome. The level of chromosomal label was expressed as the ratio of grains over the chromosomes to the corresponding background label. The data were analyzed using an analysis of variance test •■■■> 40 with an orthogonal comparison of the partitioned sums of the squares in order to compare the difference between groups. Photographs of the spreads were taken through the Ortholux microscope using a Leica 35mm camera and Kodak Panatomic-X film. The film was developed in a 1:3 dilu tion of Kodak Microdal-X, and prints were made on Kodak Kodobromide F-5 single weight print paper. Acrldine Orange Tagged DNA Non-radioactive DNA was tagged with acridine orange. Following MAK fractionation of nucleic acids obtained from D. melanogaster third instar larvae, the DNA peak was purified enzymatically with RNAase, as previously described. Following vacuum dessication (-20°C), the DNA was dissolved in Hank's solution to give a final concentration of 150/^g/ ml. Tagging was accomplished by adding a very small amount of ether purified acridine orange to the solution. Care was taken not to add excessive dye, for this will precipi tate the DNA. The dye-nucleic acid complex w a s 'separated from the unbound dye by gel-filtration with Sephadex G-25. H a n k ’s solution was used as an elutant. The presence of the dye-DNA complex in a particular fraction was detected by short wave ultraviolet illumination. Acridine Orange - DNA Cultures Salivary glands were incubated in H a n k ’s containing the acridine orange-DNA complex. After 45min, 0.1ml of 4i salmon sperm DNA solution containing lOO/vg of DNA was added. Controls were established by growing glands in acridine orange in H a n k ’s without DNA. Purposely injured glands were maintained in both media containing the acri dine ‘orange -DNA complex and acridine orange without DNA. The glands were maintained in culture for 4hrs and then spread in cold 45/£ acetic acid buffered to pH 2.2 with sodium acetate. The coverslips were removed and the slides were immersed in buffered 0.1M NaCl containing 20^ glycerol. All slides were prepared as wet-mounts and were observed through the Ortholux microscope equipped with a blue light fluorescence attachment, X = 400nm. Fluorescing chromosomes were photographed with dark-field optics, using Kodak High Speed Ektaohrome Type B film. The photographic slides were copied on Kodak Ektacolor Professional Film with a Nikon FTN 35*nm camera and slide copier, and prints were made from these negatives by the Kodak Company. RESULTS Extraction, Purification, and 3 I-I - Labelling The extraction of nucleic acids from the 9.2g of larvae obtained from the cultures containing ^j-I-Thymidine yielded 10ml of solution containing 3mg of nucleic acid per ml. MAK fractionation of the nucleic acids showed that the “\H-label was highly concentrated in the DNA peak, although there were some traces of label in the two'ENA peaks. Separation of the respective nucleic acid fractions was complete, and there was no evidence of radioactive material in the intermediate samples. The results of the extraction, purification, and ^H-labelling procedures are presented in Figure 1. Spectral analysis of enzymatically purified DNA showed a peak absorbance at 260nm and 280nm/260nm, 230nm/260nm ratios of 0.48, 0.42 respectively. was 171cpm^g. Final specific activity of the DNA This DNA solution was then used as a culture medium. Quantitative Studies on DNA Uptake The data presented were obtained from three repli cates involving ten cultures each and an equal number of controls. The TCA fractionation of the culture medium 3 showed a much greater proportion of I-I-labelled material in the TCA soluble (low molecular weight) fraction (Figure 42 2) over that found in the controls. in the soluble, 3 H-labelled material: There was an increase insoluble, labelled material ratio from 1.3:1 to 6:1. 3 H- These data represent the means of the values obtained with three replicates. In the TCA fractionation of the gland homogenates the insoluble fraction of two of the replicates was as large or larger than the soluble fraction. In the third, the reverse was true; the soluble fraction was much larger than the insoluble fraction (Figure 3)j moreover the insoluble fraction was smaller than in the other two experiments. These data indicate an average uptake of 0.0096/Jg of exogenous DNA per pair of salivary glands, ) equivalent to approximately 12yo of their DNA content. , Glands grown in cultures containing free H-Thymi- dine, in the same concentration (71.9yug/ml) and with the same specific activity (ll4cpm/^ug) as would be present with total degradation of the exogenous DNA, did not sur vive. The longest survival period under these conditions was about 1 hr. These data indicate that free thymidine at this concentration is toxic to the salivary glands under these controlled experimental conditions. Autoradiopjraphic Studies Observations of the autoradiographs showed that the silver grains were primarily located over the chromosomes and nucleoli. The pattern of labelling was generally 44 uniform (Figure 4) although a few of the spreads showed some localized labelling (Figure 5)• Label was found over a number of cells on each s l i d e . Statistical analysis of the level of labelling over the chromosomes in these experiments showed that there was a highly significant difference between the treatments (Tables 1 and 2). An orthogpnal comparison of the two experimental treatments with the controls showed that there was a highly significant difference between the amount of chromosomal labelling found in the controls and the cells exposed to exogenous ^II-DNA. a similar compari son of autoradiographs exposed to 3H-labelled chromosomes for four weeks and those exposed for six weeks showed no statistically significant difference between these two treatments (Table 2). Acrldine Orange - DNA Complex. Studies Living salivary glands treated' with the acridine orange - DNA complex for four hours showed intensive chromosomal fluorescence (Figures 6, 7 j and 8). Injured glands maintained in this culture medium did not show any fluorescence. Both types of glands exhibited heavy staining of both nuclear and background material when maintained in free acridine orange without DNA (Figure 9)• Figure 1. The ultraviolet., 260nm absorption profile of and ^H-lahel distribution in D. melanogaster nucleic acid fractions eluted from a MAK column by stepwise elution __________ UV profile distribution 175 2 .7 5 150 2+ 2 .2 5 OD 2.00 125 1.75 O D 100 260m M 1.50 CPM 1.25 [75 1.00 4&5s DNA RN A 50 .75 .50 .25 20 30 40 50 Fraction # FIG.l 60 70 80 Figure 2. A comparison of the TCA soluble and insoluble fractions of H-DNA in H a n k ’s solution: A. Culture medium after four hours exposure to living salivary glands B. Controls Sol- Insol- Sol. A Insol. B FIG.2 Figure 3. Right scale: A comparison of the propor tion of the total DNA content of the cell that was incorporated during the exposure to the radioactive exogenous DNA. The amount of DNA represented is based on a specific activity of lTlc p m ^ g as deter mined for the intact exogenous DNA. Left scale: A comparison of the 3 H- labelled TCA soluble and insoluble frac tions of the gland homogenates. The values reported are the specific activity (cpm/ 100X) of the filtrate and the millipore filter digest. %Cell DNA r *................ . FIG . 3 Figure 4. Autoradiograph of chromosomes grown in the presence of 3 H-labelled DNA for four hours Exposure time was four weeks. Note relatively uniform label distribution Magnification: Figure 5- 1700x. Autoradiograph of chromosomes grown in the 3 presence of H-labe'iled DNA for four hours Exposure time was four weeks. Note generally localized label. Magnification: 1700x. Table 1. The treatment means are presented with their standard error. Treatment 1 is from the control slides; six weeks exposure. Treat ment 2 is from autoradiographs exposed for four weeks. Treatment 3 is from autoradio graphs exposed for six weeks. Table 2. An f test analysis of variance of the treat ments. An orthogonal comparison of the control vs. the experimental treatments and an orthogonal comparison of the two experimental treatments. ** significant at the 0.01 level + not significant at the 0.05 level Samp1e 20 Sample Size Mean Treatment 2. Treatment 1 20 1-5b ± .097 Treatment 3 20 b. 15 + .193 3.9b + .Ib6 Table 1 d.f Total Treatment 110.78 3 8 b .10 1 Exp.j vs. Exp . 2 1 57 f MS 59 Con. vs. Exp. Error SS 83.6 3 b2.05 Table 2 7.09 83.63 59.56** 10. 1 .b6 •329+ 10. 1 M 26.68 29 .95 ** f.01 1 .bob Figures 6 & 7. Chromosome spreads from two slides showing fluorescence of the incor porated acridine orange - DNA complex. Note yellow-green color. Photographed with dark-field optics. Magnification: 400x Figure 8 . . Chromosomes showing fluorescence of the incorporated acridine orange - DNA complex Note yellow-green color. Photographed with dark-field optics. Magnification: Figure 9. 400x Acridine orange staining of injured sali vary gland cell. Note yellow color and lack of chromosome structure. Photographed with dark-field' optics. Magnification: 400x DISCUSSION With the possibility of genetic engineering becoming a reality, scientists have begun a search for possible techniques for the introduction of foreign DNA into the genome of eukaryotic cells. promising technique. DNA uptake appears to be a Ledoux (1965) points out that exoge nous DNA apparently can be absorbed by living cells without serious degradation of the macromolecules. Genetic and molecular studies imply that exogenous DNA is incorporated into the host cell's chromosomes (Fox, et al,, 1970 ; Ledoux, 1968, 1969; Nawa, 1966, 1967, 1968a, 1968b, 1969, 1971; Yarnada, 1967* 1968, 1969)• This study provides direct evidence for the Incorporation of exogenous DNA within the band regions of polytene chromosomes. Short term organ culture provided a technique which assured intimate contact of the cells with the exogenous DNA, while maintaining cell-to-cell contact as well as tissue and organ structure. Cells in-vitro often revert to a less specialized state of development and frequently undergo changes in ploidy. Cytological observation of the cells employed in these tests revealed no changes in chromosome structure or arrangement. Aseptic culture conditions minimized extracellular degradation. The chromosomal structure and arrangement in Drosophila salivary glands strengthens this system. 59 The 6o glands themselves are in prolonged interphase and no cell division occurs after differentiation. DNA synthesis is active until about the middle of third instar development, when it begins to decrease. Chromosomes exhibit a high degree of polyteny and are easily visible without induction of metaphase configurations. Such polyteny also provides an increased number of binding sites for exogenous DNA, making visualization by autoradiography possible. In addition, heterochromatin which might interfere with binding is localized in a chromocenter. Desai (1970) reported observation of autoradiographic label in the band regions of dipteran ploytene chromosomes following injection of larvae with labelled bacterial DNA. However, he did not present photographic evidence of his observations. The data presented in this study confirm chromosomal incorporation and provide clear visual evi dence of such interaction between the host cell's genome and incorporated DNA. Maximal DNA uptake occurs if the DNA is highly polymerized and is not denatured. The presence of pro tein on DNA seems to enhance cellular degradation of absorbed molecules. The elution profile of the H-DNA em ployed in this system illustrates a clean separation of the nucleic acid fractions and isolation of the radioac tive label within the DNA peak (Figure l ) . Such a profile indicated the highly polymerized and native condition of 3 the DNA. Isolation of the H label indicated association 61 of the label within the macromolecular structure of this fraction. Low W absorption at 230nm and 280nm demon strated the absence of aromatic amino acids from the pre paration. These data indicated the qualitative nature of the DNA preparation employed. 3 Salivary glands exposed to this PI-DNA for 4 hr in organ culture partially degraded the DNA (Figure 2). The TCA soluble and insoluble fractions contained less label after exposure to the salivary glands. The ratio of the TCA soluble fraction to the TCA insoluble fraction was altered from that observed in the controls. Some of the change resulted from absorbance of high molecular weight DNA by the glands. However, the increase in the relative amount of TCA soluble material was large enough to indicate some degradation of the macromolecules. These results, .that some of the exogenous DNA is degraded, were in agree ment with the finding of previous investigators (Ledoux, 1965). The amount of exogenous DNA absorbed by the cells 3 of the salivary glands exposed to PI-DNA was relatively high. As stated previously, the amount of exogenous DNA incorporated by a living cell may vary greatly (Ledoux, 1965). The average amount of labelled, exogenous DNA absorbed by the salivary gland cells in this study was 0.0096/<g per pair of salivary glands. Since the average DNA content of a pair of salivary glands is 0.08/Ug of DNA (Patterson, 1952), the additional DNA is equivalent to 12$ 62 of the cells' total DNA content. This value is higher than those found in the literature. The question arises as to whether this incorporated label represents exogenous DNA in its native molecular configuration or the incorporation of labelled DNA degra dation products into newly synthesized endogenous DNA. The latter case seems highly unlikely for several reasons. As previously stated, third instar larval salivary glands have reduced DNA synthesis and increased protein synthesis with increasing age. Ploytene chromosomes of very late third instar larval salivary glands show visible signs of deterioration. The larvae used in this study were as old as possible, without having begun prepupal changes. If the entire quantity of DNA in the cultures was completely degraded to form a free nucleotide pool for DNA synthesis, the count/min of the TCA insoluble fraction from' the gland homogenates would represent 0 .012/ug of incorporated thymi dine . Since doubling time for the DNA in Drosophila polytene chromosomes ranges from 8 to 14 hr (DuPraw, 1970 }'» only of a cell's total DNA content could be synthesized 25?o 3 during the 4 hr exposure to prises 1965). 29f 0 H-Thymidine. Thymidine com of the bases found in Drosophila DNA (Hastings, Under these conditions, 0.005/<g of thymidine could be Incorporated into cellular DNA. one half of that observed. in Figure 2 This value is less than In addition, the data presented showed that not all the DNA in the cultures was degraded. Further evidence for the lack of detectable DNA synthesis can he seen in Figure 3. Replicate 3* which contained cells having the greatest amount of TCA soluble material, had the lowest amount of TCA insoluble material. This indicated very little incorporation of low molecular weight material into glandular DNA, which would be detec table in the insoluble fraction if exogenous DNA degrada tion products were being reuti'lized. Additional evidence that synthesis is not responsible for the uptake of label comes from cultures grown in a medium containing free thymidine in the same concentra tions as would exist with complete degradation of the exogenous DNA. Partial degradation would not supply suf ficient label to achieve even one half of the observed labelling. The glands in these cultures all died within the first hour. Apparently thymidine at these concentra tions was toxic to Drosophila cells. These results show that exogenous DNA was taken up by the salivary gland cells and was recovered in the TCA insoluble, high molecular weight, fraction of the cellular homogenate. The site of incorporation was not clarified by these resultsj however, autoradiographs of polytene chromosome spreads prepared from salivary glands grown in this same culture medium gave evidence of the sites of incorporation. The majority of silver grains were located over the chromosomes and most of the spreads showed the label to be distributed over the entire chromosome (Figure 4). None of the spreads showed high silver grain 64 - concentrations in specific regions. tions would be ex.pected if the via DNA synthesis. Localized concentra- H were being incorporated Replication in polytene chromosomes begins at several specific sites along each chromosome arm and proceeds from these points. Tritium labelling would be concentrated in the areas undergoing replication at the time of exposure. This would result in clumping of the silver grains over specific areas* which was not observed. Occasionally areas of higher concentration were found but even in these cases the label was still distributed over the spread (Figure 5)• The highly significant degree of labelling over the treated chromosomes must be attri buted to the presence of radioactive molecules incorporated into their structure. The degree of labelling achieved could not result from DNA -synthesis and therefore must be attributed to the chromosomal incorporation of exogenous 3H-DNA. Tagging of DNA with a fluorescent molecule* acridine orange* provided a rapid and sensitive method of visual!-' zing the chromosomal incorporation of exogenous DNA. The chromosome spreads prepared from salivary glands grown in the medium containing the acridine orange - DNA complex showed a characteristic yellow-green fluorescence in short wave blue light (400nm) (Figures 6* 7* 8). The fluorescent color indicates that acridine orange is bound to DNA. De spite the specificity of this color reaction* the unlikely possibility exists that the dye-DNA complex underwent dissociation with acridine orange, alone, entering the cells. Previously reported evidence on the stability of DNA in cultures (Ledoux., 1965) makes it doubtful that enough fluorescent ds^e could be liberated during the pre scribed incubation period to produce the intensity of staining demonstrated (Figures 6, 7 > 8)• In addition, it was found that injured cells did not show chromosomal fluorescence after incubation with the dye-DNA complex. However, both normal and injured cells incubated with free acridine orange exhibited intense fluorescence of both nuclear and background material (Figure 9 )• The injured cells in such preparations showed . extensive deterioration and lack of chromosomal structure. The normal cells showed very compact nuclei, indicative cf cell damage. In contrast to these effects, the acridine orange-DNA complex entered only living cells and'did not result in damage. This suggests that the lack of fluo rescence in injured cells incubated with the dye-DNA com plex was not due to a change in membrane permiability to the free dye, but that the acridine orange-DNA complex was stable under the culture conditions used in this study. The complex was capable of entering living cells and binding to the host cells’ chromosomes. This study demonstrates that under controlled condi tions exogenous DNA is absorbed by living cells and binds to the host cell’s chromosomes. Whether incorporated DNA was linearly integrated into the chromosome or existed as an "exosome" configuration as described by Fox (Fox, et a l ♦ 1970)* was not determined. Most genetic evidence points to at least a temporary "exosome" arrangement as evidenced by the aberrent segregation patterns observed by Nawa (1968). Since polytene chromosomes are composed of many copies of the genome arranged in a parallel configuration, the chromosomal incorporation of relatively large amounts of exogenous DNA, as reported in this study, would not necessitate genomic replacement. This arrangement would be compatible with the "exosome" model of chromosomal incorporation. However, if whole body transformations are to be accomplished, linear integration of the exogenous DNA into the host's genome seems to be necessary. There is a possibility of transcription of both endogenous and incorporated DNA, but evidence presented thus far makes this seem unlikely. While all the facts about the incor poration of exogenous DNA by eukaryotic cells are yet to be clarified, it is apparent that such a phenomenon is a reality. The chromosomal incorporation of exogenous DNA, demonstrated in this study, enhances the possibility of practical applications of this phenomenon. The addition of selected genes to an existing genome offers many oppor tunities for alleviation of genetic disorders. Repression of cancer by treatment with exogenous DNA has already become an area of very active investigation. The possi bility of using DNA uptake as a method for in-vivo nucleic acid hybridization is under investigation. Investigation on alteration of genetic metabolic disorders, such as sickle cell anemia, by DNA treatment are becoming more common. While caution should be taken not to think of this phenomenon as a cure-all for every genetic disorder troubling mankind, it appears that DNA uptake may indeed provide the answer to some of these problems. SUMMARY A comprehensive review of the literature on the uptake of DNA by eukaryotic cells was presented. Prom the evidence presented in previous studies, it can be concluded that living cells are capable of absorbing exogenous DNA intact and that this DNA can function in the transcription of genetic information. Both in-vitro and in-vivo studies have yielded information on the manner of DNA uptake, the size of the molecules incorporated, the amount of DNA ab sorbed by a cell, the fate of the absorbed DNA, and its eventual biological activity within the cell. Recent successful transformations of intact animals have enabled investigators to suggest that the incorporated molecules are bound to the host cell's chromosomes rather than existing as a free episome. This study provides direct evidence for the chromo somal incorporation of exogenous DNA by salivary glands maintained in short term organ culture. Quantitative studies provide evidence that the amount of DNA incor porated into the cells could not have occurred through synthesis. The quantity of DNA taken up by the cells was equivalent to about 12% of their genome. graphs showed a significant incorporation of the chromosomes. Autoradio- 3 H-DNA into The labelled DNA seemed to be distri buted over a cell's entire chromosomal compliment. 68 Further evidence of chromosomal incorporation was obtained by using DNA tagged with acridine orange. Fluorescent micro copy demonstrated the presence of the acridine orange-DNA complex in the chromosomes after four hours of culture. These data provide excellent direct evidence for the chromosomal incorporation of absorbed exogenous DNA. This system seems to offer a possible method of altering many of the genetically mediated malfunctions of living organisms. LITERATURE CITED Adams, J., YJ. Martin, and C. Pomerat (1964). Incorporation of DNA by HeLa cells during various phases of the cell cycle. J. Cell B i o l . 23: 3A. Alloway, J. L. (1933)* Further observations on the use of pneumococcus extracts in affecting transforma tion of type in vitro. J. Expt 1 . M e d ...57: 265 . Avery, 0. T., C. M. MacLeod, and M. McCarty (1944). 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Genet. Jap. 19: 2 7 . Yamada, M. A. and S. Nawa (1969). Characterization of incorporated DNA in Ephestia eggs treated with D N A . A n n . R e p . N a t . Inst. Genet."J a p . 20: 38 . Yosida, T. H. and T. Sekiguchi (1968). Rat metaphase chromosomes incorporated into mouse metaphase cells. Ann. Rep. Nat. Inst. Genet. Jap. 19: 15- VITA John Watkins Williams, III was born in Alexandria, Louisiana on 11 March 1942. After graduating from Riverside Military Academy in Gainsville, Georgia, in June, i960, he began his undergraduate studies at Spring Hill College in Mobile, Alabama in the Pall of i960 . In September, 1961, he transferred to the University of Southwestern Louisiana in Lafayette, Louisiana and in June, 1965> received a Bachelor of Science degree with a major in Pre-medicine. Entering the Louisiana State University Graduate School in September, 1965, in the'Department of Zoology and Phys- . iology, he served as a graduate teaching assistant from September, 1965, to January, 1966, and from September, 1966, to June, 1969. In August, 1968, he was awarded a Master of Science degree with a major in Zoology. The following February, 19^9* he was employed as a research assistant on a Public Health Service Grant awarded to Dr. W. L. French. He was awarded a Graduate School Disser tation Year Fellowship for the 1970-1971 academic year, and is presently a candidate for the Doctor of Philosophy degree. 79 EXAMINATION AND THESIS REPORT Candidate: John Watkins W i l l i a m s , M ajor Field: Title of Thesis: III General Zoology Evidence f o r the I n c o r p o r a t i o n o f Exogenous DNA by the Polytene Chromosomes o f L i v i n g Drosophila Mojavensis S a l i v a r y Gland Ce ll s in Short Term Organ Cu ltu re Approved: Major Professor and Chairman Dean of the Graduate School EXAMINING COMMITTEE: Date of Examination:
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