Journal of Experimental Botany, Vol. 56, No. 416, pp. 1449–1462, June 2005 doi:10.1093/jxb/eri161 Advance Access publication 29 April, 2005 FOCUS PAPER Chloroplasts as source and target of cellular redox regulation: a discussion on chloroplast redox signals in the context of plant physiology Margarete Baier* and Karl-Josef Dietz Biochemistry and Physiology of Plants, University of Bielefeld, D-33501 Bielefeld, Germany Received 28 January 2005; Accepted 15 March 2005 Abstract During the evolution of plants, chloroplasts have lost the exclusive genetic control over redox regulation and antioxidant gene expression. Together with many other genes, all genes encoding antioxidant enzymes and enzymes involved in the biosynthesis of low molecular weight antioxidants were transferred to the nucleus. On the other hand, photosynthesis bears a high risk for photo-oxidative damage. Concomitantly, an intricate network for mutual regulation by anthero- and retrograde signals has emerged to co-ordinate the activities of the different genetic and metabolic compartments. A major focus of recent research in chloroplast regulation addressed the mechanisms of redox sensing and signal transmission, the identification of regulatory targets, and the understanding of adaptation mechanisms. In addition to redox signals communicated through signalling cascades also used in pathogen and wounding responses, specific chloroplast signals control nuclear gene expression. Signalling pathways are triggered by the redox state of the plastoquinone pool, the thioredoxin system, and the acceptor availability at photosystem I, in addition to control by oxolipins, tetrapyrroles, carbohydrates, and abscisic acid. The signalling function is discussed in the context of regulatory circuitries that control the expression of antioxidant enzymes and redox modulators, demonstrating the principal role of chloroplasts as the source and target of redox regulation. Key words: Abscisic acid, antioxidants, chloroplast, gene expression, oxolipin, peroxiredoxin, photosynthesis, redox regulation, signalling, stress. Introduction In plants, photosynthesis generates redox intermediates with extraordinarily negative redox potentials. Light-driven electron transport transfers electrons from the acceptor site of photosystem I (Em < ÿ900 mV) to various acceptors including oxygen (Em = 815 mV; Blankenship, 2002). The redox intermediates cover an exceptionally wide range of mid-point redox potentials (Dietz, 2003) with a significant risk for electron transfer to oxygen and other appropriate targets. Among the best known examples for chloroplast redox chemistry is the direct electron transfer from reduced ferredoxin to O2 in the so-called Mehler reaction (Mehler, 1951). The superoxide radicals formed can be quickly converted into H2O2 and highly reactive hydroxyl radicals (HOc) (Elstner, 1990). Together with reactive oxygen species (ROS) generated by other sources, they are a continuous threat to cellular constituents for uncontrolled oxidation. In the context of (i) the physiologically bivalent oxygen chemistry, (ii) the demand for reductive power, and (iii) the peril of excess photosynthetic electron pressure, chloroplasts are prone to oxidative damage like no other organelle (Foyer et al., 1997). Consequently, photosynthetic organisms have evolved defence mechanisms to control the redox poise of the electron transport chain and the redox environment of the stroma. They range from the suppression of * To whom correspondence should be addressed. Fax: +49 (0)521 106 6039. E-mail: [email protected] Abbreviations: 2CPA, 2-Cys peroxiredoxin A; ABA, abscisic acid; DBMIB, 3-methyl-6-isopropyl-p-benzoquinone; DCMU, 3-(39,49-dichlorophenyl-)1,1dimethyl urea; DOX, fatty acid dioxygenase; Em, mid-point potential; LOX, lipoxygenase; MAPK(K)(K), mitogen activated protein kinase (kinase) (kinase); NDH, NAD(P)H dehydrogenase; PET, photosynthetic electron transport; PQ, plastoquinone; Prx, peroxiredoxin; ROS, reactive oxygen species; Rubisco, ribulose-1,5-bisphosphate carboxylase oxygenase. ª The Author [2005]. Published by Oxford University Press [on behalf of the Society for Experimental Biology]. All rights reserved. For Permissions, please e-mail: [email protected] 1450 Baier and Dietz ROS generation and avoidance of uncontrolled oxidation of essential biomolecules by accumulating high concentrations of low-molecular weight antioxidants to repair mechanisms by reduction and de novo synthesis of damaged molecules. In the illuminated chloroplast, the reduction energy for the regeneration of oxidized metabolites is mainly taken from the photosynthetic electron transport (PET). Depending on the photo-oxidative strain, up to almost 100% of the photosynthetically transported electrons can be diverted into the antioxidant defence system (Asada, 2000). In the dark, when the strong reductive power of photosynthesis is missing, the redox environment of chloroplasts probably adjusts to redox potentials similar to those measured in the cytoplasm of heterotrophic cells (i.e. below ÿ300 mV to approximately ÿ240 mV; Dietz, 2003). Under these conditions, chloroplasts stabilize their redox poise by metabolization of starch and import of reduction energy. Studies with various transgenic plant lines and mutants demonstrated the importance of a high antioxidant capacity as realized by low-molecular weight antioxidants (Pastori et al., 2003; Ball et al., 2004) and antioxidant enzymes (Willekens et al., 1997; Baier et al., 2000; Davletova et al., 2005). The antioxidant defence system responds to redox imbalances. The pool size of low molecular weight antioxidants and the expression of chloroplast antioxidant enzymes increases if the photo-oxidative strain on the system is high (Foyer et al., 1997). Interestingly, oxidizing conditions correlate with a high reduction state, since, as outlined above, excess electrons are transferred to O2 that, in turn, abstract electrons from organic targets. This apparent contradiction (‘high reducing activity results in oxidizing conditions’) will be important for understanding redox regulation, as for example in the peroxiredoxin function, in the context of photosynthesis (see below). However, all chloroplast antioxidant enzymes and all enzymes involved in the biosynthesis of lowmolecular-weight antioxidants are nuclear encoded. The spatial separation of expression and function demands for signal transduction over the chloroplast envelope. Deviations from regular redox homeostasis can be sensed in the chloroplast and transmitted to the nucleus by retrograde signalling cascades. Alternatively, redox imbalances in the chloroplast could be transmitted into the cytoplasm by metabolic coupling (Fig. 1). The sensor then resides in the cytoplasm. Transmission of redox signals suffers from the drawback that cytoplasmic redox homeostasis and antioxidant defence will strongly damp the spreading signal. Another terminology to be clarified is the distinction of signalling and regulation. Both terms are used with a broad meaning here. Regulation describes any adjustment of activity, i.e. of enzymes or transcription factors, while signalling refers to any transport of information from one site to another via a signalling molecule that, by itself, Fig. 1. The cytosolic antioxidant system shields the nucleus from chloroplast ROS signals. Photosynthetic ROS signals and redox imbalances are buffered by cytosolic antioxidants. Whether they reach the nucleus depends on the rates of ROS-formation and the strength of the cytosolic antioxidant system. In contrast, a non-redox active second messenger can pass the cytosol without loss of function. may have additional functions, for example, as a metabolic intermediate. Redox coupling All redox active compounds together define the cellular redox poise of a cell (Schafer and Buettner, 2001). In addition to the redox energetics defined by the mid-point potentials and the concentrations of the various antioxidants, the redox state of a particular compound is under the control of kinetic constraints defining the reaction constants. Enzymes lower the kinetic barriers and couple redox pairs. Recycling of oxidized intermediates, as well as regeneration of the reductants, affect the redox state of specific redox pairs (Dietz, 2003). Different drainage rates of electrons from antioxidants and weak enzymatic linkages can uncouple the redox states of individual components of the antioxidant network, as has been observed for ascorbate and glutathione. While specific oxidation of the glutathione pool took place in catalase-deficient barley (Willekens et al., 1997), reduced 2-Cys peroxiredoxin levels led preferentially to the oxidation of the ascorbate pool in Arabidopsis thaliana (Baier et al., 2000). The favoured oxidation of glutathione in the catalase-lines is proposed to be caused by higher cytosolic dehydroascorbate reductase activity rather than glutathione reductase activity, while the redox shift in the ascorbate pool in the peroxiredoxin antisense plants might be caused by insufficient dehydroascorbate reductase activity in the chloroplasts (Noctor et al., 2000). For cellular redox homeostasis and redox metabolism, the nature of a particular antioxidant employed in a specific detoxification reaction and, within limits, the relative redox state of an Chloroplast redox regulation individual antioxidant may be of minor importance. However, deviations from redox normality can serve in signal generation and signal transmission. Defining redox signals in the context of photosynthesis The nature of the redox signals perceived, the sensory systems, and the classification of the respective responses have received increasing attention in recent years. In plant biology special focus has been given to redox signal transduction in chloroplasts as well as between chloroplasts and the nucleus for experimental and thematic reasons. (i) The metabolic state of chloroplast metabolism can easily be manipulated by altering exogenous parameters such as light, CO2, and temperature. (ii) Tools such as chlorophyll a fluorescence-based technology to estimate photosynthetic efficiency and redox state, methods at virtually all levels of molecular biology and biochemistry, and a vast accumulated body of knowledge on structure, function, regulation, and assembly facilitate interpretation of the results. (iii) Photosynthesis exerts a strong impact on the cellular redox signature and nuclear gene expression and regulates the photosynthetic capacity during longterm adaptation (Dietz, 2003). However, the hypothesis, on retrograde redox signalling originating inside chloroplasts, is generally accepted and despite these systematic advantages, the precise nature of the signals, their specificity and interaction are only recently becoming tangible. Theoretical considerations and experimental data have produced a long list of potential signals, of which a selection is discussed here in the context of the regulation of genes involved in the control of the cellular redox poise. Due to the complexity of the possible chemical nature and origin of the signals, defining redox signals depends on the line of vision and the intention. For example, Dietz (2003) grouped redox signals based on their origin and mode of action in signal transmission. According to his definition, type-I signals derive specifically from single pathways, while type-II signals integrate redox information from various pathways; type-III redox signals indicate more extreme redox imbalances and their transmission depends on crosstalk with other signalling cascades. Other definitions for redox signals are based on the threshold of induction relative to photosynthetic electron pressure (Pfannschmidt et al., 2001a) or on their putative initiation sites (Pfannschmidt et al., 2003). For chloroplast-to-nucleus signalling, which depends on passing the chloroplast envelope, a classification based on the chemical nature of the signalling compound leaving the chloroplast has been proposed (Baier and Dietz, 1998). Based on this chemical classification, a concept is followed here in which signals transmitted by redox shifts in cellular redox components or by ROS are distinguished from signals transmitted by second messengers synthesized inside chloroplasts (Fig. 1). 1451 Sensing the cellular redox poise Compelling experimental evidence for redox regulation of nuclear gene expression is available for redox signalling induced by the application of ROS, ROS-inducing stressors, low availability of antioxidants, and by antioxidant feeding, respectively. The common feature of all these treatments is that the cytosolic redox environment specifically or generally is shifted to a more oxidized or reduced state. In the context of signal transmission, special attention has been given to H2O2 (Desikan et al., 2001; Mittler et al., 2004; Vandenabeele et al., 2004). Alternatively, monitoring the cellular redox environment by sensing the redox state of certain metabolites, for example, glutathione and ascorbate, has been postulated (Foyer et al., 1997; Dietz, 2003; Pastori et al., 2003; Ball et al., 2004). Both types of metabolites, ROS and low-molecular-weight antioxidants, closely interfere. Consequently, in most experiments it is hardly possible to distinguish between signalling that is possibly originating from H2O2 and that from shifts in the redox poise of low-molecular-weight antioxidants. Therefore, they are discussed here together. Recently cDNA array hybridization experiments were performed and indicate a strong regulatory function of redox signals on nuclear gene expression. For example, Desikan et al. (2001) analysed the response of Arabidopsis thaliana to H2O2 application and Mahalingham et al. (2003) to ozone. Pastori et al. (2003) investigated the regulation of transcript amounts in the low-ascorbate mutant vtc1 and Vandenabeele et al. (2004) that in a catalasedeficient tobacco line, as well as Davletova et al. (2005) that of a knock-out mutant of cytosolic ascorbate peroxidase APx1, and Ball et al. (2004) determined the transcriptional response of the allelic glutathione biosynthetic mutants rax1-1 and cad2-1. Typical target genes with altered transcript accumulation upon treatment or in the mutants are those for PR proteins, e.g. PR1 (At2g14610), chitinase (At2g43570), and PAL (encoding phenylalanine ammonium lyase; At3g53260; At5g04230), and antioxidant enzymes as peroxidases (e.g. At4g11290 and At4g21960), dehydroascorbate reductase (At1g19570) and CuZn-superoxide dismutase (At5g18100). The sets of target genes widely overlap with the transcripts induced by pathogens and wounding (Mahalingam et al., 2003; Cheong et al., 2002). The transcription factors involved in these responses were tentatively identified either by being up-regulated at the transcriptional level (Mahalingam et al., 2003; Pastori et al., 2003; Ball et al., 2004; Davletova et al., 2005) or through the bioinformatic comparison of promoters for stress-induced transcripts (Chen et al., 2002). Candidate transcription factors are WRKY (W-box: TTGACY; Euglem et al., 2000), WRKY-like (BBWGACYT; Chen et al., 2002), SA (ACGTCA; Lebel et al., 1998), b-ZIP of the TGA1-type (TGACG; Schindler et al., 1992), GBF-type 1452 Baier and Dietz (CACGTG; Schindler et al., 1992) and ABRE-type (BACGTGKM; Shinozaki and Yamaguchi-Shinozaki, 2000), Myb (AtMyb1: MTCCWACC; AtMyb2: TAACSGTT; AtMyb3: TAACTAAC; AtMyb4: AMCWAMC; Martin and Paz-Ares, 1997; Rushton and Somssich, 1998), and AP2-like transcription factors (GCCGCC for GCC-box binding AP2s or DRCCGACNW for DRE-binding AP2s; Shinozaki and Yamaguchi-Shinozaki, 2000). In response to the many stressors inducing shifts in the cellular redox poise, for example, wounding, pathogens, ozone, UV-B, and cadmium application, mitogen activated protein kinases (MAPK) play a critical role in signal transduction (Cheong et al., 2002; Holley et al., 2003; Yeh et al., 2004). Specifically, MPK3, MPK4, and MPK6 are activated by various abiotic stresses (Ichimura et al., 2000; Kovtun et al., 2000) making them candidates for signal transduction in redox regulated stress signalling. Upstream in signal transduction, the MAPKs, MPK3 and MPK6, which are activated by the MAPKKs, MKK4 and MKK5 (Asai et al., 2002) and the MAPKKK ANP1 (Kovtun et al., 2000), interact with the nucleotide diphosphate kinase AtNDPK2 in Arabidopsis thaliana. By stimulation of the phosphorylation activity of MPK3 AtNDPK2 provides enhanced tolerance to multiple stress responses (Moon et al., 2003). The MAPK signalling cascades, which resemble animal redox signal transduction pathways (Halliwell and Gutteridge, 1999), are subjected to an additional redox modulation by redox regulation of antagonistic phosphatase activities (Mittler et al., 2004). In addition to MAPK signalling, thiol-disulphide transitions can control gene expression in response to ROS accumulation and changes in the cellular thiol homeostasis. By switching of the DNA-binding activity or the nuclear-cytoplasmic distribution of transcription factors, gene activity can directly be redox regulated (Sun and Oberley, 1996). Indications for target thiols are the cysteine residues in the C2H2-domains of WRKYs (Maeo et al., 2001) and Cys-260 and Cys-266 in TGA1 whose oxidation prevents binding of the transcription activator protein NPR1 (NON-REPRESSOR OF PR GENES) (Després et al., 2003). However, in chloroplast-to-nucleus signalling, a redox signalling pathway triggered by redox imbalances in the cytosol may only occur under severe oxidative stress. Under physiological conditions, the availability of reduction energy in conjunction with antioxidant enzymes will maintain the reducing state of the cytosol and quench ROS signals (Fig. 1). The role of chloroplast metabolism, particularly of photosynthesis, in ROS and antioxidantdependent redox regulation has been most intensely studied for the transcriptional control of the cytosolic ascorbate peroxidase apx2. In excess light, the apx2 promoter is strongly stimulated (Karpinski et al., 1997), presumably by the light-induced accumulation of H2O2 (Chang et al., 2004) and/or a decrease in the reduction state of leaf glutathione (Karpinski et al., 1997; Ball et al., 2004). Consistently, inhibition of PET by DCMU (Karpinski et al., 1997) and (over-) expression of catalase or ascorbate peroxidase in chloroplasts (Yabuta et al., 2004) suppress the high-light-dependent induction of apx2. Constitutive expression of apx2 in the rax1-1 mutant, which is affected in chloroplast glutathione biosynthesis by decreased cglutamyl cysteine synthetase activity (Ball et al., 2004), also points at signal initiation depending on oxidative stimuli. Transcripts for cytosolic APx2 accumulated in parallel to a decrease in the photochemical quench (qP), prior to the accumulation of H2O2, and responded differentially to DCMU and DBMIB, which block PET before and after the PQ pool, respectively. Therefore, Yabuta et al. (2004) reinstated the hypothesis, originally presented by Karpinski et al. (1997), that a redox change in PET, presumably the redox state of the plastoquinone pool, controls nuclear expression of cytosolic APx2. Apx2 is regulated by a heat shock factor, namely HSF3 (Panchuk et al., 2002). In the regulation of apx1, which is also H2O2-responsive, the heat-shock factor HSF21 is involved in H2O2-sensing (Davletova et al., 2005). HSF21 transmits the redox signal to the zinc-finger protein Zat12 (Rizhsky et al., 2004), whose expression is under the control of HSF21 (Davletova et al., 2005). Results from apx1 knock-out mutants of Arabidopsis thaliana suggests that cytosolic ascorbate peroxidase activity is involved in signal transmission in excess light, including ROS-based signal transmission between the chloroplasts and the nucleus (Davletova et al., 2005). The sensitivity of ascorbate peroxidases to inhibition by ROS (Miyake and Asada, 1996), may facilitate signal transmission by micro-bursts. For the regulation of nuclear-encoded chloroplast antioxidant enzymes, transcriptome analysis (Kimura et al., 2003; Davletova et al., 2005), the analysis of transcript amount for the regulation of chloroplast ascorbate peroxidase (Yoshimura et al., 2000), the chloroplast peroxiredoxins (Baier and Dietz, 1997; Horling et al., 2003), chloroplast superoxide dismutases (csd2, fsd1; Kliebenstein et al., 1998), and glutathione peroxidase gpx1 (Milla et al., 2003) revealed a lower sensitivity of gene expression to shifts in the cytosolic redox poise compared with nonplastidic antioxidant enzymes. However, in 2-Cys peroxiredoxin antisense lines of Arabidopsis thaliana, in which a specific component of the chloroplast enzymatic redox defence was suppressed, the transcripts of chloroplast monodehydroascorbate reductase and stromal and thylakoid ascorbate peroxidase were selectively induced (Baier et al., 2000). Loss of 2-Cys peroxiredoxin function led to slight photoinhibition, damage of the photosynthetic membrane, and oxidation of the ascorbate pool, suggesting photo-oxidative stress (Baier and Dietz, 1999b). The fact that three transcripts for chloroplast antioxidants accumulated, while the transcript levels for various other antioxidant Chloroplast redox regulation enzymes did not respond, indicates chloroplast-specific signals triggering nuclear expression (Baier et al., 2000). Chloroplast-to-nucleus redox signals for transmission of moderate redox imbalances Efficient transmission of a signal depends on a low threshold concentration. Accumulation of the signal, in turn, is controlled by its stability within the metabolic network. Therefore, messengers that are metabolically more inert and cannot or can only slowly be inactivated are more efficient than redox compounds such as ROS and oxidized antioxidants that are decomposed or reduced, respectively, during diffusion through the cell. In respect of chloroplast-tonucleus signalling, several putative signals have been suggested, of which some will be discussed here. Tetrapyrrole signals Indications for tetrapyrrole signals come from the analysis of cab gene expression during de-etiolation of Arabidopsis seedlings (Susek et al., 1993). The arrest of chloroplast development by a norflurazone-mediated block of carotenoid biosynthesis suppressed the expression of various nuclear-encoded chloroplast proteins, for example, Lhcb1, PsbR, RbcS, PetH, and PetE, during early seedling development (Harpster et al., 1984; Mayfield and Taylor, 1984; Bolle et al., 1994; Gray et al., 1995). Based on these observations, retrograde chloroplast signals were hypothesized for the control of nuclear transcription (Taylor, 1989). A first insight into signalling was provided by Susek et al. (1993), who isolated Arabidopsis mutants (gun), that express cab3, encoding Lhcb1-2, although chloroplast development had been arrested by norflurazone. Mapping of the mutations showed defects in haem oxidase (gun2), phytochromobilin synthase (gun3), a regulator of Mgchelatase (gun4), and the H-subunit of Mg-chelatase (gun5) (Mochizoki et al., 2001; Larkin et al., 2003; Strand et al., 2003) indicating a role of tetrapyrrole biosynthesis in the regulation of nuclear transcription (Strand et al., 2003). Either Mg-protoporphyrin-IX, haem or a haem precursor were assumed to be released from chloroplasts and to modify nuclear gene expression by binding to a regulatory protein, which interacts with the CUF1-element found in several promoters of 70 genes mis-regulated in gun2 and gun5 (Strand et al., 2003; Strand, 2004). In higher plants, the pathways of chlorophyll and haem biosynthesis are tightly regulated at an early step. Haem triggers feed-back inhibition of Glu-tRNA reductase, which catalyses biosynthesis of the tetrapyrrole precursor daminolevulinic acid (ALA) (Beale, 1999). While haem binds to the N-terminus of the enzyme (Vothknecht et al., 1998), FLU, which is a negative regulator of chlorophyll biosynthesis (Meskauskien et al., 2001), regulates GlutRNA reductase at the C-terminus (Goslings et al., 2004). 1453 Characterization of the mutant ulf3, which is allelic to gun2 (Susek et al., 1993), demonstrated that tetrapyrrole biosynthesis is concurrently regulated by FLU mediating the feedback from the Mg2+ branch and ulf3/gun2 controlling the haem branch (Goslings et al., 2004), which makes tetrapyrroles unlikely to accumulate in mature tissues. In addition, Keetman et al. (2002) showed, in tobacco coproporphyrinogen oxidase antisense lines, which accumulate protoporphyrin-IX, that imbalances in tetrapyrrole biosynthesis primarily lead to modulation of gene expression by photosensitization of the pigments. Redox signals, for example, H2O2 accumulation or shifts in the redox state of low-molecular-weight antioxidants, may be involved in the suppression of nuclear gene expression in norflurazonetreated seedlings, although Strand et al. (2003) excluded severe differences in the steady-state levels of superoxide for the gun mutants by semi-quantitative NBT-staining. In mature leaves, expression of cab3, which was used as a target gene in the gun-screen, is regulated by photosynthetic electron transport (Sullivan and Gray, 2002), presumably by the acceptor availability of photosystem I (Pursiheimo et al., 2001). Photo-damaged tetrapyrroles may regulate nuclear gene expression, as for example, photo-oxidized haem controls the capping of catalase mRNA in rye (Schmidt et al., 2002). Oxolipin signals Besides oxidatively damaged tetrapyrroles, oxolipins are another type of putative redox-related signals in chloroplastdependent redox regulation. In pathogen response, for example, they modulate oxidative bursts (Rao et al., 2000). Their biosynthesis initiates from alkyl hydroperoxides, which are formed preferentially under unfavourable conditions by oxidation of unsaturated fatty acids either mediated by ROS (Blée and Joyard, 1996), lipoxygenase (LOX) (Feussner and Wasternack, 2002) or fatty acid dioxygenases (DOX) (de Leon et al., 2002). Detailed time-resolved mass spectrometric analysis of lipids and lipid hydroperoxides (Montillet et al., 2004) revealed early activation of the 13-LOX pathway in response to various kinds of stresses. By contrast, ROS-mediated peroxidation, which is stimulated by excess excitation energy, appears to be a late process (Montillet et al., 2004) when the antioxidant defence is close to oxidative collapse. Various plant signalling molecules are synthesized from alkyl hydroperoxides (Blée and Joyard, 1996). Jasmonates, which are a group of 12-carbon fatty acid cyclopentanones and dinoroxo-phytodienoic acids, and 2(R)-hydroperoxide fatty acids, and are well known from pathogen and wounding responses, protect plant cells from oxidative stress and cell death (Farmer et al., 1998; Mauch et al., 2001; Hamberg et al., 2003). Inside the chloroplast, accumulation of lipid peroxides is suppressed by glutathione peroxidases and peroxiredoxins. 1454 Baier and Dietz Both enzymes are haem-free peroxidases reducing alkyl hydroperoxides by a thiol-based reaction mechanism (Baier and Dietz, 1999a). The genome of Arabidopsis thaliana contains two open reading frames for chloroplast glutathione peroxidases (gpx1 and gpx7), of which only gpx1 is expressed (Milla et al., 2003), and four open reading frames for chloroplast peroxiredoxins (Horling et al., 2003). Peroxiredoxins and gpx1 are induced by H2O2 and butylhydroperoxide (Horling et al., 2003; Avsian-Kretchmer et al., 2004) indicating that their expression possibly antagonizes oxolipin signal formation. However, expression of gpx1 and 2CPA, which are the only isogenes for which the analysis has been performed so far, are not responsive to jasmonates or salicylates (Milla et al., 2003; Baier et al., 2004) suggesting primary control of oxolipin biosynthesis by the relative rates of fatty acid peroxidation. Peroxide formation and reduction may be further uncoupled due to the sensitivity of the active site cysteine residues to over-oxidation. 2-Cys Prx have been suggested to function as flood gates that normally keep peroxides at a low level (Wood et al., 2003; König et al., 2003). Following a sudden increase in peroxides they are over-oxidized and inactivated. Subsequently, the oxolipin signal can spread freely as shown for mammalian cells (Wood et al., 2003). Glutathione peroxidases, which show only low activities in plant cells, and the ascorbate peroxidases, which are highly specific for H2O2 and sensitive to inactivation by low ascorbate availability, are very likely not able to compensate for decreased Prx activity. Plant 2-Cys Prx is efficiently inactivated especially by bulky peroxides, like lipid peroxides (König et al., 2003). Therefore, with the accumulation of alkyl hydroperoxides, oxolipin biosynthesis may get increasingly dependent on LOX-, DOX-, and ROS-stimulation. In recent years various mutants with decreased sensitivity to jasmonates (and salicylates) and high sensitivity to ROS have been isolated, for example, the jin (Berger et al., 1996), jar (Staswick et al., 2002), coi1 (Xie et al., 1998), npr1 (Scott et al., 2004), rcd1 (Ahlfors et al., 2004), and oji mutants (Kanna et al., 2003). Although primarily investigated in relation to the wounding and pathogen response, the signal transduction elements identified could also be involved in any other type of oxolipin signalling, such as in the chloroplast-to-nucleus signalling discussed here. The first components of jasmonate signal transduction have been cloned: Jin1, which is essential for discrimination between different jasmonate-regulated defence responses, encodes the transcription factor AtMyc2 (Lorenzo et al., 2004), the F-box protein COI1 with 16 leucine rich motifs (Xie et al., 1998), and the WWE-protein RCD1 (Ahlfors et al., 2004). Recent cloning of JAR1, which encodes a jasmonate amino acid synthetase, showed that jasmonates are activated by conjugation to isoleucine (Staswick and Tiryaki, 2004) which is another chloroplast-derived metabolite. Photosynthetically controlled signals The redox state of the plastoquinone pool: Efficient regulation of gene expression in relation to photosynthesis should directly respond to photosynthetic activity. In recent years, photosynthetic control of both nuclear as well as plastid gene expression has been linked to the redox state of the plastoquinone (PQ) pool which regulates expression of, for instance, petE2 (Pfannschmidt et al., 2001b), encoding a plastocyanin, in sugar-starved cells (Oswald et al., 2001) and under low light conditions (Pfannschmidt et al., 2001b). A small pool of 7–10 PQ molecules per photosystem II mediates electron transfer between photosystem II and the cytochrome b6 f-complex, making plastoquinol diffusion the rate limiting step (Haehnel et al., 1984). The relative activities of photosystem II as electron input and photosystem I as drainage, cyclic electron transport and chlororespiration adjust the redox state of PQ (Allen, 1992; Heber, 2002). Depending on the PQ redox state presumably by binding of plastoquinol to the cytochrome b6 fcomplex (Zito et al., 1999), the kinase TAK1 is activated and initiates processes like state transition (Snyders and Kohorn, 2001). Whether this kinase also transmits other kinds of PQ-dependent responses, for example, in the regulation of psaAB transcription (Pfannschmidt et al., 1999) and nuclear expression of petE2, or whether PQ triggers several independent signal transduction cascades in parallel is still open for discussion. Regarding expression of other nuclear-encoded chloroplast proteins, co-regulation with the redox state of the PQ pool has been demonstrated for cab genes in unicellular green algae (Escoubas et al., 1995; Maxwell et al., 1995). A more detailed recent study (Chen et al., 2004) demonstrates that, in the case of Dunaliella tertiolecta, PQdependent modulation of lhcb1 expression starts only 8 h after modifying the PQ redox state. Immediately after inducing the redox shift in the PQ pool the trans-thylakoid membrane potential is the predominant regulator of gene expression. The long lag phase suggests that expression of signal transduction elements and proteins involved in the co-ordination of a regulatory network is necessary for establishing the correlation between gene activity and the redox state of the PQ pool. In higher plants, only weak indication for PQ-dependent regulation of genes for light-harvesting complex proteins (LHCP) is available. For cab genes, encoding LHCP of photosystem II, PQ-dependent regulation has been experimentally excluded for winter rye by Pursiheimo et al. (2001), who describe a correlation of gene expression with the acceptor availability of photosystem I. In addition, PQdependent redox regulation was not observed for nuclear encoded psaF and psaD expression in mustard seedlings (Pfannschmidt et al., 2001b). Interestingly, even in the case of petE2, which to date is the model gene for the regulation of nuclear gene expression by the PQ redox state, other Chloroplast redox regulation signals such as the sugar status (Oswald et al., 2001), phytochrome-A (Dijkwel et al., 1997) and abscisic acid (Huijser et al., 2000) are dominant regulators in Arabidopsis thaliana. In pea and tobacco, PQ-dependent regulation is overwritten and antagonized post-translationally by a PETdependent signal (Sullivan and Gray, 2002). It is tempting to assume that the PQ signal, which is central in regulating state transition (Allen, 1992) and chloroplast transcription of photoreaction centre proteins (Pfannschmidt et al., 1999), is of minor importance for chloroplast-to-nucleus signalling in mature leaves and under most environmental circumstances. According to the gradual model of redox signalling proposed by Pfannschmidt et al. (2001a) PQ triggers the signalling pathway with the highest sensitivity and lowest threshold to redox imbalances. Based on the data available, PQdependent signalling appears to have an ancillary or insignificant role in controlling the genetic responses to metabolically relevant redox imbalances in green tissues under ambient growth conditions and moderate stress. This conclusion is supported by a recent study in which regulation of gene expression in response to PQ redox state has been studied on a transcriptome level (Fey et al., 2005). Although small sets of genes have been identified as being responsive to the PQ redox state, the experiments were performed at photon flux densities of less than 40 lmol mÿ2 sÿ1, i.e. conditions that barely have major relevance for regulatory adjustment of photosynthesis under natural conditions. At higher light intensities (a cloudy day corresponds to 100–300 lmol mÿ2 sÿ1and a sunny day to 1500–2000 lmol mÿ2 sÿ1) the PQ pool is intermediately reduced under most conditions. However, in the vascular tissues and their bundle sheaths, where the redox state of the PQ pool may be controlled more strongly by NADPH-dependent, presumably NDH-mediated reduction (Peltier and Cournac, 2002), a signalling function is more likely. Therefore, expression of cytosolic apx2, which is preferentially expressed along the main veins (Ball et al., 2004), may correlate with the PQ redox state (Yabuta et al., 2004) as well as with the cellular redox status (Chang et al., 2004) and the availability of low molecular weight antioxidants (Ball et al., 2004). Thioredoxin-mediated signals: At the acceptor site of photosystem I, ferredoxin-thioredoxin reductase reduces thioredoxins (Trx) depending on the electron pressure and the reduction state of ferredoxin (Fridlyand and Scheibe, 1999). A genome-wide survey showed various chloroplast thioredoxins, namely four Trx-m, two Trx-f, two Trx-y, and one Trx-x (Collin et al., 2004). Together with other small redox proteins like glutaredoxins (Rouhier et al., 2004) and cyclophilins (Romano et al., 2004) they mediate thioldisulphide redox interchange of various chloroplast proteins like fructose-1,6-bisphosphase, malate dehydrogenase, peroxiredoxins, and the RB60-protein with partly overlapping specificity. The redox states of the target proteins modulate the chloroplast metabolite fluxes, ATP synthesis, 1455 the release of reduction energy into the cytosol, the chloroplast peroxidase activity and chloroplast translation (Schürmann, 2003; König et al., 2002; Barnes and Mayfield, 2003). As indicated by the spectrum of target proteins (Motohashi et al., 2001), redox regulation depending on the redox state of thioredoxins is manifold and far from being understood comprehensively. In this context, the classification of Trx function as signal, sensor or transmitter of redox information depends on definition. The reduction state of thioredoxin is an indicator of redox state and thus a transmitter for subsequent signal generation by downstream events rather than the signal or sensor itself. The sink capacity for consumption of reduction energy of the thiol system is determined by the auto-oxidation rate of target proteins (Schürmann, 2003) and, in case of peroxiredoxins, by the rates of peroxide reduction (König et al., 2002). Electron drainage into the thioredoxin pathways withdraws electron from ferredoxin:NADP+-reductase and the Mehler reaction (Fridlyand and Scheibe, 1999) and thus competes with the generation of ROS and possible (reductive) signals in metabolic pathways. The allocation of electrons between the different metabolic sinks has to be adjusted for optimal assimilation rate versus dissipation of excess energy. For example, peroxides produced in the Mehler reaction are detoxified by ascorbate peroxidase or peroxiredoxin yielding dehydroascorbic acid and oxidized peroxiredoxin, respectively. Through the regeneration of reduced ascorbate and peroxiredoxin, both reaction sequences consume further reductive power and relieve electron pressure in the PET chain (Fortis and Elli, 1996; Dietz et al., 2002). Redox information must be central in the regulation of these processes. Photosynthates and the plastidic redox state of NADPH/ NADP+: The photosynthetic electron transport drives reductive metabolism. Therefore, basically any metabolite synthesized, depending on the availability of reducing energy, could be a redox signal. Examples for putative signalling metabolites are carbohydrates (‘sugar sensing’), which are synthesized in photosynthesis and consumed in mitochondria by respiration depending on the cellular energy status (‘energy sensing’). Channelling reduction energy between chloroplasts and mitochondria can protect photosynthesis against photoinhibition (Saradadevi and Raghavendra, 1992). In light-enhanced dark respiration, malate is the preferred redox transmitter (Padmasree et al., 2002). NADH generated by dehydrogenase activity is fed into the respiratory electron transport chain and the alternative oxidase branch (Gardeström et al., 2002). It is open for debate if and how sensing of the cytosolic carbohydrate concentration interferes with redox signalling. Sugar signalling involves, for example, hexokinase (Jang et al., 1997), which drives the expression of various nuclear-encoded chloroplast proteins, including suppression of Rubisco, light-harvesting complex proteins, and 1456 Baier and Dietz seduheptulose bisphosphatase (Moore et al., 2003), and SNF1-like kinases (Halford et al., 2003). Some of the target genes, for example, lhcb1 (cab3) and petE2, are also model genes in the analysis of redox signalling (see above). In addition to stimulating respiration, carbohydrate fluxes between chloroplast and cytosol mediate the exchange of information on the chloroplast redox state. Two wellstudied examples for redox valves controlled by carbohydrate metabolism are the malate-oxaloacetate shuttle and the triose phosphate/3-phosphoglycerate shuttle (Heineke et al., 1991) (Fig. 2). Both transporters exchange redox energy between the chloroplastic NADPH and the cytosolic NADH-system. Since the chloroplastic NADPH/NADP+ ratio is about 0.5 in the light and the cytosolic NADH/ NAD+ ratio about 10ÿ3 (Heineke et al., 1991), the transport is essentially unidirectional due to photosynthetic activity and depends on the photosynthetic electron pressure (triose-phosphate/3-phosphoglycerate shuttle) and Trxdependent enzyme activation (malate valve). Other putative signalling molecules are amino acids, whose biosynthesis provides a strong electron sink by the high consumption of reduction energy in carbohydrate biosynthesis and nitrate reduction. That the signalling pathways, which are presently under investigation (Palenchar et al., 2004), could have an impact on chloroplast redox signature is, for example, indicated by co-regulation of the ferredoxin gene At2g27510 and the two ferredoxin-NADP+reductases At1g30510 and At4g05390. Expression of the proteins, which are involved in distributing electrons from the photosynthetic light chain to NADP+, is controlled by a carbon/nitrogen signalling pathway with dominance of the carbon component (Palenchar et al., 2004). Analyses of lhcb1 transcription in winter rye and of 2-Cys Prx (2CPA) in Arabidopsis thaliana indicate Fig. 2. The malate-oxaloacetate and the triose-phosphate-shuttle link the chloroplast NADPH pool with the cytosolic NADH-pool. 3-PGA, 3-phosphoglycerate; 1,3-bPGA, glycerate-1,3-bisphosphate; DHAP, dihydroxyacetonephosphate; GAP, glyceraldehyde-3-phosphate (figure adapted from Heineke et al., 1991. ªThe American Society of Plant Biologists, with permission). regulation by the redox state of chloroplast NADPH/ NADP+ (Pursiheimo et al., 2001; Baier et al., 2004). However, transcriptional activity of cab genes and 2CPA is distinctly regulated in response to photosynthates. While transcription of lhcb1 is suppressed by sugars via the hexokinase-dependent pathway (Moore et al., 2003), regulation of 2CPA is independent of sugar signalling (Baier et al., 2004). Low concentrations of externally applied sugars even increases 2CPA promoter activity by 10–20%. The dominance of redox-regulation of 2CPA was demonstrated by low 2CPA-promoter driven reporter gene activity in the presence of strong electron sinks such as CO2 and NOÿ 3 (Baier et al., 2004). Since the inhibition of PET also decreased the promoter activity, regulation depends on photosynthetic activity. Apparently, the acceptor availability of photosystem I, possibly mediated by the redox state of the NADPH/NADP+-system, controls the promoter activity (Baier et al., 2004). External application of millimolar amounts of peroxides only slightly increased 2CPA transcript amount (Baier and Dietz, 1997; Horling et al., 2003; Baier et al., 2004), while a strong up-regulation was seen upon wounding which rapidly and efficiently suppresses photosynthetic activity (Chang et al., 2004). These data support the view that the regulatory redox signal is of chloroplast origin. Pharmacological studies suggest that signal transduction takes place via protein kinases. In the expressional inhibition under reducing conditions a staurosporinesensitive serine/threonine kinase is involved, while under oxidizing conditions a PD98059-sensitive MAPKK transmits the signal (Horling et al., 2001; Baier et al., 2004). The analysis of Arabidopsis mutants with lower induction of 2CPA, the rimb-mutants, suggests that chloroplast monodehydroascorbate reductase, stromal ascorbate peroxidase, chloroplast CuZn superoxide dismutase csd2, and plastidic malate dehydrogenase are modulated by components of the signalling pathway triggering 2CPA expression (I Heiber and M Baier, unpublished results). Abscisic acid and violaxanthin-cycle activity: In case of 2CPA gene expression, redox regulation of transcription depends on the plant hormone abscisic acid (ABA) (Baier et al., 2004). In addition, ABA-responsive cis-elements are found in promoters of many nuclear-encoded chloroplast proteins (Weatherwax et al., 1996; Milla et al., 2003). The close interrelation between ABA signalling and photosynthesis is indicated by the isolation of alleles for ABAbiosynthetic enzymes and for ABA signal transduction elements in screens for mutants impaired in the expression of the plastocyanin gene petE2 (Huijser et al., 2000) and the gene for a regulatory subunit of ADP-glucose pyrophosphorylase (apL3; Rook et al., 2001). PetE2 (Huijser et al., 2000) is like 2CPA (Baier et al., 2004) suppressed by ABA, while apL3 (Rook et al., 2001) is like apx2 (Chang et al., 2004) ABA-induced (Fig. 3). Chloroplast redox regulation thylakoid lumen H+ Asc AscH thylakoid neoxanthin chloroplast stroma NCED violaxanthin VDE DHA antheraxanthin ZE xanthoxin NADP+ 1457 cytosol xanthoxin ABA aldehyde NADPH zeaxanthin H+ H+ + O2 PS-I ABA NADPH + NADP PS-II ROS Asc H2O DHA DHA GSH Asc Asc GSSG DHA NADP+ ROS Transcription apx2, apL3 2CPA, petE2 NADPH Fig. 3. Regulation of ABA biosynthesis by photosynthesis. Violaxanthin de-epoxidase (VDE) acitivity is stimulated by thylakoid acidification and driven by the availability of protonated, reduced ascorbate (AscH), while zeaxanthin epoxidase (ZE) depends on NADPH. Under photo-oxidizing conditions, detoxification of ROS can limit VDE due to increased oxidation of ascorbate (Asc) to dehydroascorbate (DHA). 9-cis-epoxycarotenoid dioxygenase (NCED) catalyses xanthoxin synthesis from neoxanthin and violaxanthin. In the cytosol ABA is synthesized in two steps from xanthoxin and regulates nuclear gene expression by triggering a specific signalling cascade. ABA biosynthesis starts inside the chloroplast and depends on xanthoxin synthesized from violaxanthin and the violaxanthin-derivative neoxanthin (Finkelstein and Rock, 2002) (Fig. 3). Most of the violaxanthin within the thylakoid membrane takes part in the xanthophyll cycle, which is a redox reaction system of reversible xanthophyll epoxidation and de-epoxidation (Eskling et al., 1997). In excess light, the xanthophyll cycle is activated for the dissipation of excess energy. De-epoxidation of violaxanthin to zeaxanthin via antheraxanthin requires reduced and protonated ascorbic acid in the thylakoid lumen (Bratt et al., 1995), which makes it not only dependent on the ascorbate content, but also on the redox state of the ascorbate pool. Regeneration of ascorbate is covered by the NADPH-dependent Halliwell–Foyer cycle (Foyer and Halliwell, 1977). However, if dehydroascorbate reduction cannot keep pace with ascorbate oxidation, the xanthophyll cycle gets uncoupled. If violaxanthin accumulates, it may promote ABA synthesis. The hypothesis on the regulation of ABA-biosynthesis by ascorbate availability is supported by the characterization of the ascorbate biosynthetic mutant vtc1 (Pastori et al., 2003). In leaves, which accumulate only 30% of wild-type ascorbate (Conklin et al., 1997), the ABA content was increased by 60% (Pastori et al., 2003). In parallel, the expression of 9-cis-epoxycarotenoid dioxygenase (NCED) increased (Pastori et al., 2003), which catalyses the irreversible oxidative cleavage of neoxanthin and/ or violaxanthin to xanthoxin (Finkelstein and Rock, 2002), indicating that ABA biosynthesis in a low ascorbate background is also promoted by the adaptation of gene expression. The thylakoid lumen is especially sensitive to limitations in ascorbate availability since it depends on noncatalysed diffusion of ascorbate through the thylakoid membrane (Foyer and Lelandais, 1996). The supply with reduced ascorbate to the lumen is affected by the local redox poise on the stromal site, where, for example, the Mehler reaction and ascorbate peroxidase activity strain the ascorbate pool. The redox regulation of ABA biosynthesis dependent on PET is further enhanced by redox-regulation of ABA signal transduction, as oxidative inhibition of the ABA antagonistic phosphatases ABI1 and ABA2 (Meinhard and Grill, 2001; Meinhard et al., 2002) increases ABA sensitivity. The oxidative stimulation of ABA biosynthesis and ABA signal transduction has a different impact on the expression of various antioxidant enzymes. For example, transcript levels of cytosolic ascorbate peroxidase apx2 are up-regulated by ABA (Cheong et al., 2004). As a consequence of ABA-induced H2O2 generation, apx2 is induced under photoinhibitory conditions (Chang et al., 2004). High activity of the antioxidant enzyme helps to balance the cytosolic redox poise, as long as the cytosolic ascorbate availability is sufficient to support H2O2 reduction. Thus, it is assumed that the chloroplast ABA signal synergistically increases the cytosolic antioxidant capacity before the extraplastidic compartments are flooded with photooxidatively produced ROS. In addition to cytosolic apx2 (Chang et al., 2004), chloroplastic gpx1 is induced by ABA (Milla et al., 2003). GPx1 acts independently of ascorbate by using reduced glutathione as a co-factor, which can more efficiently be regenerated inside the chloroplast by glutathione reductase at the expense of NADPH (Baier et al., 2000; Noctor et al., 2000). Under photoinhibitory conditions, increased amounts of Gpx1 may substitute for chloroplast ascorbate peroxidase, which is susceptible to shifts in the redox poise of ascorbate (Miyake and Asada, 1996). 1458 Baier and Dietz Expression of 2CPA, which is a peroxidase reducing a broad range of peroxides independent of low-molecularweight antioxidants as co-factors (Baier and Dietz, 1999a, b; König et al., 2003) is suppressed by ABA (Baier et al., 2004). The antagonism of oxidative induction and ABA suppression may keep the transcript and protein on fairly constant, but high, levels under most growth conditions including stress situations (Baier and Dietz, 1996, 1997; Horling et al., 2003; Baier et al., 2004). Exceptions are observed under severe stresses like wounding (Baier et al., 2004) and limitations in thioredoxin regeneration (Keryer et al., 2004), which is needed for driving peroxiredoxin activity (König et al., 2002). Biochemical analysis of 2-Cys Prx in barley (König et al., 2003) demonstrated that under stress conditions increasing portions of the active site of the enzyme get over-oxidized. The oxidation causes conformational changes leading to decamerization and attachment of the inactive enzyme to the thylakoid membranes (König et al., 2003). Ongoing work with transgenic Arabidopsis thaliana lines and in vitro studies with isolated thylakoids and heterologously expressed PRX suggest that the binding of 2-Cys Prx to the thylakoid membrane modulates PET (P Lamkemeyer, WX Li, M Laxa, K-J Dietz, unpublished results). As outlined above, 2CPA expression is antagonistically regulated by negative inputs through ABA and reductive stimuli, and positive input by oxidative stimuli. This mechanism reduces the rates for re-synthesis of active enzyme under stress conditions (Fig. 4). Another explanation for ABA-dependent suppression of 2CPA may be linked to its substrate spectrum. Prx reduces a wide range of alkyl hydroperoxides (König et al., 2002) some of which are precursors for oxolipid biosynthesis (Blée and Joyard, 1996). Consistent with the finding by Andersson and coworkers (2004) that disruption of AtMYC2, which encodes a transcription factor positively regulating ABA-responses, resulted in elevated expression of jasmonate responsive genes, ABA-suppression of 2CPA may lead to stimulated rates of jasmonate synthesis. Perspectives In the context of photosynthesis and in the regulation of antioxidant enzymes, chloroplasts act both as source and target of redox regulation. They are tightly integrated in cellular metabolism, a fact that often complicates the experimental dissecting of signal transduction pathways and pinpointing the causes and consequences of regulatory reactions. During evolution, the endosymbiont maintained its photosynthetic capacity with all the associated potential oxidative hazards. However, most structural and functional genes were transferred from the plastome to the nucleus, including all antioxidant and most regulatory genes. A sophisticated network of regulation evolved composed of anthero- and retrograde signalling pathways with significant crosstalk and efficient feedback. gene expression NADPH chloroplast 2-Cys Prx ABA nucleus ROS ROS ROOH ROH Oxolipins cytosol cytosolic antioxidant defence Fig. 4. 2-Cys peroxiredoxins as source and target for redox regulation. 2-Cys Prx are nuclear encoded chloroplast peroxidases, which reduce alkylhydroperoxide (ROOH). Under photo-oxidative stress conditions, the active site of the enzyme gets inactivated by over-oxidation. Conformational changes lead to decamerization of 2-Cys peroxiredoxin and thylakoid attachment. Gene expression is regulated by the redox poise of NADPH/NADP+, ROS, and abscisic acid (ABA), with increasing amounts of NADPH and ABA repressing the promoter activity and higher oxidation of the NADPH/NADP+-system and ROS inducing it. The oxolipin jasmonic acid and salicylic acid, whose biosynthesis can possibly be regulated by 2-Cys Prx-dependent reduction of alkyl hydroperoxides, do not directly influence promoter activity. However, they could, like ABA, increase the oxidative strain on the cytosolic redox environment. In chloroplasts, antioxidant enzymes came together from different evolutionary origins (Asada, 2000). They have been adapted for their function in protecting against the risks of oxygenic photosynthesis, while the oxygen concentration and light intensities increased. Together with the chloroplast targeting signals, the promoters have evolved. From double targeting of the antioxidant enzymes glutathione reductase, ascorbate peroxidase, and monodehydroascorbate reductase into chloroplasts and mitochondria (Chew et al., 2003) it has to be assumed that this process is still ongoing. 2-Cys peroxiredoxins and glutathione peroxidase already show compartmentspecific targeting and regulation (Baier and Dietz, 1997; Mullineaux et al., 1998). For 2-Cys peroxiredoxin-A, which is very likely of endosymbiotic origin (Baier and Dietz, 1997), by taking over an ancient function in the protection of the photosynthetic membrane, promoter adaptation closed a regulatory circuitry of multi-level redox regulation, in which the chloroplast enzyme is the source and the target of redox regulation (Fig. 4). Analysis of the gpx gene structures (Milla et al., 2003) points to the multiplication of a single ancestor gene. Only gpx1 transcripts, which encode the chloroplast isoforms, are induced by ABA and gpx1 is, besides gpx6, the only gpx gene not responding to the oxolipin derivates jasmonic acid and salicylic acid (Milla et al., 2003). The regulation pattern indicates specific responses to second messengers generated by chloroplast metabolism by moderate (ABA) and strong (oxolipins) redox imbalances. Chloroplast redox regulation Acknowledgement Parts of our own work presented here were supported by the DFG (FOR 387 TP3 and Ba2011/2). References Ahlfors R, Land S, Overmyer K, et al. 2004. Arabidopsis RADICAL-INDUCED CELL DEATH1 belongs to the WWE protein–protein interaction domain protein family and modulates abscisic acid, ethylene, and methyljasmonate responses. The Plant Cell 16, 1925–1937. Allen JF. 1992. Protein phosphorylation in regulation of photosynthesis. Biochimica et Biophysica Acta 1098, 275–335. Asada K. 2000. The water–water cycle as alternative photon and electron sink. Philosophical Transactions of the Royal Society London B 355, 1419–1431. Asai T, Tena G, Plotnikova J, Willmann MR, Chiu W-L, GomezGomez L, Boller T, Ausubel FM, Sheen J. 2002. MAP kinase signalling cascade in Arabidopsis innate immunity. Nature 415, 977–983. Avsian-Kretchmer O, Gueta-Dahan Y, Lev-Yadun S, Gollop R, Ben-Hayyim G. 2004. The salt-stress signal transduction pathway that activates the gpx1 promoter is mediated by intracellular H2O2, different from pathway induced by extracellular H2O2. Plant Physiology 135, 1685–1696. Baier M, Dietz K-J. 1996. Primary structure and expression of plant homologues of animal and fungal thioredoxin-dependent peroxide reductases and bacterial alkyl hydroperoxide reductases. Plant Molecular Biology 31, 553–564. Baier M, Dietz K-J. 1997. The plant 2-Cys peroxiredoxin BAS1 is a nuclear-encoded chloroplast protein: its expressional regulation, phylogenetic origin, and implications for its specific physiological function in plants. The Plant Journal 60, 282–314. Baier M, Dietz K-J. 1998. The costs and benefits of oxygen for photosynthesizing cells. Progress in Botany 60, 282–314. Baier M, Dietz K-J. 1999a. Alkyl hydroperoxide reductases: the way out of the oxidative breakdown of lipids in chloroplasts. Trends in Plant Science 4, 166–168. Baier M, Dietz K-J. 1999b. Protective function of chloroplast 2cysteine peroxiredoxin in photosynthesis. Evidence from transgenic Arabidopsis. Plant Physiology 119, 1407–1414. Baier M, Noctor G, Foyer CH, Dietz KJ. 2000. Antisense suppression of 2-Cys peroxiredoxin in Arabidopsis specifically enhanced activities and expression of enzymes associated with ascorbate metabolism but not glutathione metabolism. Plant Physiology 124, 823–832. Baier M, Ströher E, Dietz KJ. 2004. The acceptor availability at photosystem I and ABA control nuclear expression of 2-Cys peroxiredoxin-A in Arabidopsis thaliana. Plant and Cell Physiology 45, 997–1006. Ball L, Accotto G-P, Bechtold U, et al. 2004. Evidence for a direct link between glutathione biosynthesis and stress defense gene expression in Arabidopsis. The Plant Cell 16, 2448–2462. Barnes D, Mayfield SP. 2003. Redox control of post-transcriptional processes in the chloroplast. Antioxidants and Redox Signaling 5, 89–94. Beale SJ. 1999. Enzymes in chlorophyll biosynthesis. Photosynthesis Research 60, 43–73. Berger S, Bell E, Mullet JE. 1996. Two methyl jasmonate-insensitive mutants show altered expression of AtVsp in response to methyl jasmonate and wounding. Plant Physiology 111, 525–531. Blankenship RE. 2002. Molecular mechanisms of photosynthesis. London: Blackwell. 1459 Blée E, Joyard J. 1996. Envelope membranes from spinach chloroplasts are a site of metabolism of PUFA hydroperoxides. Plant Physiology 110, 445–454. Bolle C, Sopory SL, Lübberstedt T, Klösgen R, Herrmann RG, Oelmüller R. 1994. The role of plastids in the expression of nuclear genes for thylakoid proteins studied with chemirc b-glucuronidase gene fusions. Plant Physiology 105, 1355–1364. Bratt CE, Arvidsson P-O, Carlsson M, Åkerlund H-E. 1995. Regulation of violaxanthin de-epoxidase activity by pH and ascorbate concentration. Photosynthesis Research 45, 169–175. Chang CC-C, Ball L, Fryer MJ, Baker NR, Karpinski S, Mullineaux PM. 2004. Induction of ASCORBATE PEROXIDASE 2 expression in wounded Arabidopsis leaves does not involve known wound-signalling pathways but is associated with changes in photosynthesis. The Plant Journal 38, 499–511. Chen YB, Durnford DG, Koblizek M, Falkowski PG. 2004. Plastid regulation of Lhcb1 transcription in the chlorophyte alga Dunaliella tertiolecta. Plant Physiology 136, 3737–3750. Chen W, Provart NJ, Glazebrook J, et al. 2002. Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses. The Plant Cell 14, 559–574. Cheong YH, Chang H-S, Gupta R, Wang X, Zhu T, Luan S. 2002. Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis. Plant Physiology 129, 661–677. Chew O, Whelan J, Millar AH. 2003. Molecular definition of the ascorbate-glutathione cycle in Arabidopsis mitochondria reveals dual targeting of antioxidant defenses in plants. Journal of Biological Chemistry 278, 46869–46877. Collin V, Lamkemeyer P, Miginiac-Maslow M, Hirasawa M, Knaff DB, Dietz K-J, Issakidis-Bourguet E. 2004. Characterization of plastidial thioredoxins from Arabidopsis belonging to the new y-type. Plant Physiology 136, 4088–4095. Conklin PL, Pallanca JE, Last RL, Smirnoff N. 1997. L-Ascorbic acid metabolism in the ascorbate-deficient Arabidopsis mutant vtc1. Plant Physiology 115, 1227–1285. Davletova S, Rizhsky L, Liang H, Shengquiang Z, Oliver DJ, Coutu J, Shulaev V, Schlauch K, Mittler R. 2005. Cytosolic ascorbate peroxidase 1 is a central component of the reactive oxygen gene network of Arabidopsis. The Plant Cell 17, 268–281. deLeon IP, Sanz A, Hamberg M, Castresana C. 2002. Involvement of the Arabidopsis alpha-DOX1 fatty acid dioxygenase against oxidative stress and cell death. The Plant Journal 29, 61–72. Desikan R, AH-Mackerness S, Hancock JT, Neill SJ. 2001. Regulation of the Arabidopsis transcriptome by oxidative stress. Plant Physiology 127, 159–172. Després C, Chubak C, Rochon A, Clark R, Bethune T, Desveaux D, Fobert PR. 2003. The Arabidopsis NPR1 disease resistance protein is a novel cofactor that confers redox regulation of DNA binding activity to the basic domain/leucine zipper transcription factor TGA1. The Plant Cell 15, 2181–2191. Dietz KJ. 2003. Redox control, redox signaling, and redox homeostasis in plant cells. International Reviews in Cytology 228, 141–193. Dietz KJ, Horling F, König J, Baier M. 2002. The function of the chloroplast 2-cysteine peroxiredoxin in peroxide detoxification and its regulation. Journal of Experimental Botany 53, 1321–1329. Dijkwel PP, Huijser C, Weisbeek PJ, Smeekens SCM. 1997. Sucrose control of phytochrome A signaling in Arabidopsis. The Plant Cell 9, 583–595. Elstner EF. 1990. Der Sauerstoff: Biochemie, Biologie, Medizin. Mannheim: BI Wissenschaftsverlag. 1460 Baier and Dietz Escoubas J-M, Lomas M, LaRoche S, Stutios LM, Angell NA, Mindrinos M, Cho RJ, Oefner PJ, Davis RW, Ausubel FM. 1995. Light intensity regulation of cab gene transcription is signalled by the redox state of the plastoquinone pool. Proceedings of the National Academy of Sciences, USA 92, 10237–10241. Eskling M, Arvidsson P-O, Åkerlund H-E. 1997. The xanthophylls cycle, its regulation and components. Physiologia Plantarum 100, 806–816. Euglem T, Rushton PJ, Robatzek S, Somssich IE. 2000. The WRKY superfamily of plant transcription factors. Trends in Plant Science 5, 199–206. Farmer EE, Weber H, Vollweider S. 1998. Fatty acid signalling in Arabidopsis. Planta 206, 167–174. Feussner I, Wasternack C. 2002. The lipoxygenase pathway. Annual Reviews in Plant Biology 53, 275–297. Fey V, Wagner R, Bräutigam K, Wirtz M, Hell R, Dietzmann A, Leister D, Oelmüller R, Pfannschmidt T. 2005. Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. Journal of Biological Chemistry (online Manuscript M406358200). Finkelstein RR, Rock CD. 2002. Ascorbic acid biosynthesis and response. In: The Arabidopsis book. American Society of Plant Biologists. Fortis G, Elli G. 1996. Stimulation of photophosphorylation by ascorbate as a function of light intensity. Plant Physiology 112, 1509–1511. Foyer CH, Halliwell B. 1977. Presence of glutathione and glutathione reductase in chloroplasts—proposed role in ascorbic acid metabolism. Planta 133, 21–25. Foyer CH, Lelandais M. 1996. A comparison of the relative rates of transport of ascorbate and glucose across the thylakoid, chloroplast and plasmalemma membranes of pea mesophyll cells. Journal of Plant Physiology 148, 391–398. Foyer CH, Lelandais M, Kunert K-J. 1997. Photo-oxidative stress in plants. Physiologia Plantarum 92, 696–717. Fridlyand LE, Scheibe R. 1999. Controlled distribution of electrons between acceptors in chloroplasts: a theoretical consideration. Biochimica et Biophysica Acta 1413, 31–42. Gardeström P, Igamberdiev AU, Raghavendra AS. 2002. Mitochondrial functions in light and significance to carbon–nitrogen interactions. In: Foyer CH, Noctor G, eds. Advances in photosynthesis and respiration: photosynthetic nitrogen assimilation and associated carbon metabolism, Vol. 12. Dortrecht: Kluwer Academic Press, 151–172. Goslings D, Meskauskien R, Kim C, Lee KP, Nater M, Apel K. 2004. Concurrent interactions of haem and FLU with Glut RNA reductase (HEMA1), the target of metabolic feedback inhibition of tetrapyrrole biosynthesis, in dark- and light-grown Arabidopsis plants. The Plant Journal 40, 957–967. Gray JC, Sornarajah R, Zabron AA, Duckett CM, Khan MS. 1995. Chloroplast control of nuclear gene expression. In: Mathis P, ed. Photosynthesis: from light to biosphere, Vol. 3. Dordrecht: Kluwer Academic Press, 543–550. Haehnel W. 1984. Photosynthetic electron transport in higher plants. Annual Review of Plant Physiology 35, 659–693. Halford NG, Hey S, Jhurreea D, Laurie S, McKibbin RS, Paul M, Zhang Y. 2003. Metabolic signalling and carbon partitioning: role of Snf1-related (SnRK1) protein kinase. Journal of Experimental Botany 54, 467–475. Halliwell B, Gutteridge JMC. 1999. Free radicals in biology and medicine. Oxford: Oxford Science Pulications. Hamberg M, Sanz A, Rodriguez MJ, Calvo AP, Castresana C. 2003. Activation of the PUFA a-dioxygenase pathway during bacterial infection of tobacco leaves; formation of oxolipins protecting against cell death. Journal of Biological Chemistry 278, 51796–51805. Harpster MH, Mayfield SP, Taylor WC. 1984. Effects of pigmentdeficient mutants on the accumulation of photosynthetic proteins in maize. Plant Molecular Biology 3, 59–71. Heber U. 2002. Irrungen, Wirrungen? The Mehler reaction in the relation to cyclic electron transport in C3 plants. Photosynthesis Research 73, 223–231. Heineke D, Riens B, Grosse H, Hoferichter P, Peter U, Flügge U-I, Heldt HW. 1991. Redox transfer across the inner chloroplast envelope membrane. Plant Physiology 95, 1131–1137. Holley SR, Yalamanchili RD, Moura DS, Ryan CA, Stratmann JW. 2003. Convergence of signalling pathways induced by systemin, oligosaccharide elicitors, and ultraviolet-B radiation at the level of mitogen-activated protein kinases in Lycopersicon peruvianum suspension-cultured cells. Plant Physiology 132, 1728–1738. Horling F, Baier M, Dietz K-J. 2001. Redox-regulation of the expression of the peroxide-detoxifying chloroplast 2-Cys peroxiredoxin in the liverwort Riccia fluitans. Planta 214, 304–313. Horling F, Lamkemeyer P, König J, Finkemeier I, Kandlbinder A, Baier M, Dietz K-J. 2003. Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis. Plant Physiology 131, 317–325. Huijser C, Kortstee A, Pego J, Weisbeek P, Smeekens S. 2000. The Arabidopsis SUCROSE UNCOUPLED-6 gene is identical to ABSCISIC ACID INSENSITIVE-4: involvement of abscisic acid in sugar responses. The Plant Journal 23, 577–585. Ichimura K, Mizoguchi T, Yoshida R, Shinozaki K. 2000. Various abiotic stresses rapidly activate Arabidopsis MAP kinases ATMPK4 and ATMPK6. The Plant Journal 24, 655–665. Jang J-C, Léon P, Zhou L, Sheen J. 1997. Hexokinase as a sugar sensor in higher plants. The Plant Cell 9, 5–19. Kanna M, Tamaoki M, Kubo A, et al. 2003. Isolation of an ozoneinsensitive and jasmonate-semi-insensitive Arabidopsis mutant (oji1). Plant and Cell Physiology 44, 1301–1310. Karpinski S, Escobar C, Karpinska B, Creissen G, Mullineaux PM. 1997. Photosynthetic electron transport regulates expression of cytosolic ascorbate peroxidase genes in Arabidopsis during excess light stress. The Plant Cell 9, 627–640. Keetman U, Mock HP, Grimm B. 2002. Kinetics of antioxidative defense responses to photosensitization in porphyrin-accumulating tobacco plants. Plant Physiology and Biochemistry 40, 697–707. Keryer E, Collin V, Lavergne D, Lemaire S, Issakidis-Bourguet E. 2004. Characterization of Arabidopsis mutants for the variable subunit of ferredoxin:thioredoxin reductase. Photosynthesis Research 79, 265–274. Kimura M, Yamamoto YY, Seti M, Sakurai T, Sato M, Abe T, Yoshida S, Manabe K, Shinozaki K, Matsui M. 2003. Identification of Arabidopsis genes regulated by high light-stress using cDNA microarray. Photochemistry and Photobiology 77, 226–233. Kliebenstein DJ, Monde R-A, Last RL. 1998. Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disperate regulation and protein localization. Plant Physiology 118, 637–650. König J, Baier M, Horling F, Kahmann U, Schürmann P, Dietz K-J. 2002. The plant-specific function of 2-Cys peroxiredoxin-mediated detoxification of peroxides in the redox-hierarchy of photosynthetic electron flux. Proceedings of the National Academy of Sciences, USA 99, 5738–5743. König J, Lotte K, Plessow R, Brockhinke A, Baier M, Dietz K-J. 2003. Reaction mechanism of plant 2-Cys peroxiredoxin: role of Chloroplast redox regulation the C-terminus and the quaternary structure. Journal of Biological Chemistry 278, 24409–24420. Kovtun Y, Chiu WL, Tena G, Sheen J. 2000. Functional analysis of oxidative stress-activated mitogen-activated protein kinase cascades in plants. Proceedings of the National Academy of Sciences, USA 97, 2940–2945. Larkin RM, Alonso JM, Ecker JR, Chory J. 2003. GUN4, a regulator of chlorophyll synthesis and intracellular signaling. Science 299, 902–906. Lebel E, Heifetz P, Thorne L, Uknes S, Ryals J, Ward E. 1998. Functional analysis of regulatory sequences controlling PR-1 gene expression in Arabidopsis. The Plant Journal 16, 223–233. Lorenzo O, Chico JM, Sanchez-Serrano JJ, Solano R. 2004. Jasmonate-insensitive1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis. The Plant Cell 16, 1938–1950. Maeo K, Hayashi S, Kojima-Suzuki H, Morikami A, Nakamura K. 2001. The role of conserved residues of the WRKY domain in the DNA-binding of tobacco WRKY family proteins. Bioscience, Biotechnology and Biochemistry 65, 2428–2436. Mahalingam R, Gomez-Buitrago AM, Eckardt N, Shah N, Guevara-Garcia A, Day P, Raina R, Fedoroff NV. 2003. Characterizing the stress/defense transcriptome of Arabidopsis. Genome 4, R20. Martin C, Paz-Ares J. 1997. MYB transcription factors in plants. Trends in Genetics 13, 67–73. Mauch F, Mauch-Mani B, Gaille C, Kull B, Haas D, Reimann C. 2001. Manipulation of salicylate content in Arabidopsis thaliana by the expression of an engineered bacterial salicylate synthase. The Plant Journal 25, 67–77. Mayfield SP, Taylor WC. 1984. Carotenoid-deficient maize seedlings fail to accumulate light-harvesting chlorophyll a/b binding protein (LHCP) mRNA. European Journal of Biochemistry 144, 79–84. Maxwell DP, Laudenbach DE, Huner NPA. 1995. Redox regulation of light-harvesting complex II and cab mRNA abundance in Dunaliella salina. Plant Physiology 109, 787–795. Mehler A. 1951. Studies on the reaction of illuminated chloroplasts. I. Mechanisms of the reduction of oxygen and other Hill reagents. Archives in Biochemistry and Biophysics 33, 65–77. Meinhard M, Grill E. 2001. Hydrogen peroxide is a regulator of ABI1, a protein phosphatase 2C from Arabidopsis. FEBS Letters 508, 443–446. Meinhard M, Rodriguez PL, Grill E. 2002. The sensitivity of ABI2 to hydrogen peroxide links abscisic acid-response regulator to redox signalling. Planta 214, 775–782. Meskauskien R, Nater M, Goslings D, Kessler F, op den Camp R, Apel K. 2001. FLU: a negative regulator of chlorophyll biosynthesis in Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA 98, 12826–12831. Milla MAR, Marer A, Huete AR, Gustafson JP. 2003. Glutathione peroxidase genes in Arabidopsis are ubiquitous and regulated by abiotic stresses through diverse signalling pathways. The Plant Journal 36, 602–615. Mittler R, Vanderauwera S, Gollery M, Van Breusegem F. 2004. The reactive oxygen gene network of plants. Trends in Plant Science 9, 490–498. Miyake C, Asada K. 1996. Inactivation mechanisms of ascorbate peroxidase at low concentrations of ascorbate: hydrogen peroxide decomposes compound I of ascorbate peroxidase. Plant and Cell Physiology 37, 423–430. Mochizuki N, Brusslan JA, Larkin R, Nagatani A, Chory J. 2001. Arabidopsis genomes uncoupled 5 (gun5) mutant reveals the involvement of Mg-chelatase H subunit in plastid-to-nucleus signal transduction. Proceedings of the National Academy of Sciences, USA 98, 2053–2058. 1461 Montillet J-L, Cacas J-L, Garnier L, et al. 2004. The upstream oxylipins profile of Arabidopsis thaliana: a tool to scan for oxidative stress. The Plant Journal 40, 439–451. Moon H, Lee B, Choi G, et al. 2003. NDP kinase 2 interacts with two oxidative stress-activated MAPKs to regulate cellular redox state and enhances multiple stress tolerance in transgenic plants. Proceedings of the National Academy of Sciences, USA 100, 358–363. Moore B, Zhou L, Rolland F, Hall Q, Cheng W-H, Liu Y-X, Hwang I, Jones T, Sheen J. 2003. Role of the Arabidopsis glucose sensor HXK1 in nutrient, light, and hormonal signalling. Science 300, 332–336. Motohashi K, Kondoh A, Stumpp MT, Hisabori T. 2001. A comprehensive survey of proteins targeted by chloroplast thioredoxins. Proceedings of the National Academy of Sciences, USA 98, 11224–11229. Mullineaux PM, Karpinski S, Jimenez A, Cleary SP, Robinson C, Creissen GP. 1998. Identification of cDNAs encoding plastid-targeted glutathione-peroxidase. The Plant Journal 13, 375–379. Noctor G, Veljovic-Jovanovic S, Foyer C. 2000. Peroxide processing in photosynthesis: antioxidant coupling and redox signalling. Philosophical Transactions of the Royal Society London, Series B 355, 1465–1475. Oswald O, Martin T, Dominy PJ, Graham IA. 2001. Plastid redox state and sugars: interactive regulators of nuclear-encoded photosynthetic gene expression. Proceedings of the National Academy of Sciences, USA 98, 2047–2052. Pastori GM, Kiddle G, Antoniw J, Bernard S, VeljovicJovanovic S, Verrier PJ, Noctor G, Foyer CH. 2003. Leaf vitamin C contents modulate plant defense transcripts and regulate genes that control development through hormone signaling. The Plant Cell 15, 939–951. Padmasree K, Padmavathi L, Raghavendra AS. 2002. Essentiality of mitochondrial oxidative metabolism for photosynthesis: optimization of carbon assimilation and protection against photoinhibition. Critical Reviews in Biochemistry and Molecular Biology 37, 71–119. Palenchar PM, Kouranov A, Lejay LV, Coruzzi GM. 2004. Genome-wide patterns of carbon and nitrogen regulation of gene expression validate the combined carbon and nitrogen (CN)signalling hypothesis in plants. Genome Biology 5, R91. Panchuk II, Volkov RA, Schöffl F. 2002. Heat stress- and heat shock transcription factor-dependent expression and activity of ascorbate peroxidase in Arabidopsis. Plant Physiology 129, 838–853. Peltier G, Cournac L. 2002. Chlororespiration. Annual Review of Plant Biology 53, 523–550. Pfannschmidt T, Milsson A, Allen JF. 1999. Photosynthetic control of chloroplast gene expression. Nature 397, 625–628. Pfannschmidt T, Allen JE, Oelmüller R. 2001a. Principles of redox control in photosynthetic gene expression. Physiologia Plantarum 112, 1–9. Pfannschmidt T, Schütze K, Brost M, Oelmüller R. 2001b. A novel mechanism of nuclear photosynthesis gene regulation by redox signals from the chloroplast during photosystem stoichiometry adjustment. Journal of Biological Chemistry 276, 36125–36130. Pfannschmidt T, Schütze K, Fey V, Sherameti I, Oelmüller R. 2003. Chloroplast redox control of nuclear gene expression— a new class of plastid signals in interorganellar communication. Antioxidants and Redox Signaling 5, 95–101. Pursiheimo S, Mulo P, Rintamaki E, Aro EM. 2001. Coregulation of light-harvesting complex II phosphorylation and lhcb mRNA accumulation in winter rye. The Plant Journal 26, 317–327. 1462 Baier and Dietz Rao MV, Lee HI, Creelman RA, Raskin I, Mullet JE, Davis KR. 2000. Jasmonic acid signalling modulates ozone-induced hypersenitive cell death. The Plant Cell 12, 1633–1646. Rizhsky L, Davletova S, Liang H, Mittler R. 2004. The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis. Journal of Biological Chemistry 279, 11736–11743. Romano PGN, Horton P, Gray JE. 2004. The Arabidopsis cyclophilins gene family. Plant Physiology 134, 1268–1282. Rook F, Corke F, Card R, Munz G, Smith C, Bevan MW. 2001. Impaired sucrose-induction mutants reveal the modulation of sugar-inducible starch biosynthetic gene expression by abscisic acid signalling. The Plant Journal 26, 421–433. Rouhier N, Gelhaye E, Jacquot JP. 2004. Plant glutaredoxins: still mysterious reducing systems. Cell and Molecular Life Science 61, 1266–1277. Rushton PJ, Somssich IE. 1998. Transcriptional control of plant genes responsive to pathogens. Current Opinion in Plant Biology 1, 311–315. Saradadevi K, Raghavendra AS. 1992. Dark respiration protects phtosynthesis against photoinhibition in mesophyll protoplasts od pea (Pisum sativum). Plant Physiology 99, 1232–1237. Schafer FQ, Buettner GR. 2001. Redox environment of the cell as viewed through the redox state of the glutathione disulfide/ glutathione couple. Free Radicals in Biology and Medicine 30, 1191–1212. Schindler U, Beckmann H, Cashmore AR. 1992. TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG. The Plant Cell 4, 1309–1319. Schmidt M, Dehne S, Feierabend J. 2002. Post-transcriptional mechanisms control catalase synthesis during ist light-induced turnover in rye leaves through the availability of the hemin cofactor and reversible changes of the translation efficiency of mRNA. The Plant Journal 31, 601–613. Schürmann P. 2003. Redox signaling in the chloroplast: the ferredoxin/thioredoxin system. Antioxidants and Redox Signaling 5, 69–78. Scott IM, Clarke SM, Wood JE, Mur LAJ. 2004. Salicylate accumulation inhibits growth at chilling temperature in Arabidopsis. Plant Physiology 135, 1040–1049. Shinozaki K, Yamaguchi-Shinozaki K. 2000. Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signalling pathways. Current Opinion in Plant Biology 3, 217–223. Snyders S, Kohorn BD. 2001. Disruption of thylakoid-associated kinase 1 leads to alteration of light harvesting in Arabidopsis. Journal of Biological Chemistry 276, 32169–32176. Staswick PE, Tiryaki I. 2004. The oxolipin signal jasmonic acid is activated by an enzyme that conjugates it to isoleucine in Arabidopsis. The Plant Cell 16, 2117–2127. Staswick PE, Tiryaki I, Rowe ML. 2002. Jasmonate response locus jar1 and several related Arabidopsis genes encode enzymes of the firefly luciferase superfamily that show activity on jasmonic, salicylic, and indole-3-acetic acids in an assay for adenylation. The Plant Cell 14, 1405–1415. Strand Å. 2004. Plastid-to-nucleus signalling. Current Opinion in Plant Biology 7, 621–625. Strand Å, Asami T, Alonso J, Ecker JR, Chory J. 2003. Chloroplast to nucleus communication by accumulation of Mgprotoporphyrin IX. Nature 421, 79–83. Sullivan JA, Gray JC. 2002. Multiple plastid signals regulate the expression of the pea plastocyanin gene in pea and transgenic tobacco plants. The Plant Journal 32, 763–774. Sun Y, Oberley LW. 1996. Redox regulation of transcriptional activators. Free Radicals in Biology and Medicine 21, 335–348. Susek RE, Ausubel FM, Chory J. 1993. Signal transduction mutants of Arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development. Cell 74, 787–799. Taylor WC. 1989. Regulatory interactions between nuclear and plastid genomes. Annual Review of Plant Physiology and Plant Molecular Biology 40, 211–233. Vandenabeele S, Vanderauwera S, Vuylsteke M, Rombauts S, Langebartels C, Seidlitz HK, Zabeau M, Van Montagu M, Inzé D, Van Breusegem F. 2004. Catalase deficiency drastically affects gene expression induced by high light in Arabidopsis thaliana. The Plant Journal 39, 45–58. Vothknecht UC, Kannangara CG, von Wettstein D. 1998. Barley glutamyl tRNAGLU reductase: mutations affecting haem inhibition and enzyme activity. Phytochemistry 47, 513–519. Weatherwax SC, Ong MS, Degenhardt J, Bray EA, Tobin EM. 1996. The interaction of light and abscisic acid in the regulation of plant gene expression. Plant Physiology 111, 363–370. Willekens H, Chamnongpol S, Davey M, Schraudner M, Langebartels C, Van Montagu M, Inzé D, Van Camp W. 1997. Catalase is a sink for H2O2 and is indispensable for stress defense in C3 plants. The EMBO Jounal 16, 4806–4816. Wood ZA, Schröder E, Harris JR, Poole LB. 2003. Structure, mechanism and regulation of peroxiredoxins. Trends in Biochemical Sciences 28, 32–40. Xie D-X, Feys BF, James S, Nieto-Rostro M, Turner JG. 1998. COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility. Science 280, 1091–1094. Yabuta Y, Murata T, Yoshimura K, Ishikawa T, Shigeoka S. 2004. Two distinct redox signalling pathways for cytosoloc APX induction under photo-oxidative stress. Plant Cell Physiology 45, 1586–1594. Yeh CM, Hsiao LJ, Huang HJ. 2004. Cadmium activates a mitogen-activated protein kinase gene and MBP kinases in rice. Plant and Cell Physiology 45, 1306–1312. Yoshimura K, Yabuta Y, Ishikawa T, Shigeoka S. 2000. Expression of spinach ascorbate peroxidase isoenzymes in response to oxidative stress. Plant Physiology 123, 223–233. Zito F, Finazzi G, Delosme R, Nitschke W, Picot D, Wollman FA. 1999. The Q0 site of cytochrome b6 f complexes controls the activation of LHCII kinase. EMBO Journal 18, 2961–2969.
© Copyright 2026 Paperzz