DEVELOPMENTAL BIOLOGY 106, 236-242 (1984) Developmental Time, Cell Lineage, and Environment Regulate the Newly Synthesized Proteins in Sea Urchin Embryos DEBRA PITTMAN AND SUSAN G. ERNST’ Department of Biology, Received November Tufts University, Meow-d, Massachusetts 15, 1983; accepted in revised form 02155 June 25, 1984 Strwngylocentrotus purpuratus embryos were fractionated into two cell populations of defined lineages at times corresponding to two critical developmental events: determination (16-cell stage) and early differentiation (mesenchyme blastula). The 16-cell stage blastomeres, labeled with [35S]methionine, exhibited identical protein synthesis patterns by fluorography, and this pattern was not significantly altered by cell separation. In comparing the proteins of the mesenchyme blastula to the 16-cell stage, differences (increases and decreases) were seen by fluorography of newly synthesized proteins. The synthesis of 2.9% of the mesenchyme blastula proteins is specific to or enriched in primary mesenchyme cells and 8.2% is specific to or enriched in endoderm/ectoderm cells. Additionally, in contrast to the earlier stage, the pattern of protein synthesis in the mesenchyme blastula embryos is substantially altered by cell separation. The ability to alter protein synthesis in response to environmental factors may be a further demonstration of the differentiation of these cells, (c IW Academic PWS, ant INTRODUCTION In sea urchin embryos, the patterns of newly synthesized proteins remain relatively similar from before fertilization until hatching when significant changes occur. Bedard and Brandhorst (1983) have recently carried out an extensive two-dimensional gel electrophoretic analysis of newly synthesized proteins and report that 60% of the changes in protein synthesis occurring from the time of fertilization to the pluteus stage, take place in the relatively short time period from hatching to early gastrulation. This period corresponds to about 20% of the developmental time studied and encompasses the mesenchyme blastula stage. The time from hatching to early gastrulation is characterized by the first morphological changes in sea urchin embryogenesis and also represents the time when the three germ layers start to differentiate. Cells of the sea urchin are fated by the 16-cell stage, which occurs about 5 hr postfertilization in Strongylocentrotus purpuratus. The four small micromeres at the vegetal pole are the progenitors of the primary mesenchyme cells in the mesenchyme blastula, which then secrete the spicules of the larval skeletal system. The eight animal pole mesomeres give rise to the majority of the ectoderm. The remainder of the ectodermal cells are derived from descendants of the four large macromeres at the 16-cell stage, whose descendants also make up the endoderm and secondary mesenchyme (reviewed, Okazaki, 1975). Both one- and two’ To whom all correspondence should be addressed. 0012-1606/84 $3.00 Copyright All rights 0 1984 by Academic Press, Inc. of reproduction in any form reserved. 236 dimensional polyacrylamide gel electrophoretic analysis of newly synthesized proteins in the isolated cells of the 16-cell stage embryo, have demonstrated that the patterns of protein synthesis in micromeres, mesomeres, and macromeres are essentially identical (Senger and Gross, 1978; Tufaro and Brandhorst, 1979; Harkey and Whiteley, 1983). In sea urchin embryos, the first morphological signs of cell specialization and the most significant change in the pattern of protein synthesis are apparent at the mesenchyme blastula stage. Our interest is in the cellspecific regulation of expression of genes in the strictly determined micromere-primary mesenchyme lineage. Therefore, the experiments in the present study were designed to determine if any of the changes in the pattern of protein synthesis seen at the mesenchyme blastula stage are specific to or enhanced in either the micromere-primary mesenchyme lineage or the combined lineages of the mesomeres and macromeres to presumptive endoderm and ectoderm. MATERIALS AND METHODS Sea urchin embryos. S. purpuratus were obtained from Pacific Biomarine (Venice, Calif.) and from Patrick Leahy (Corona de1 Mar, Calif.). Animals were maintained in Instant Ocean tanks at 11-13°C in a mix of natural and artificial seawaters. Spawning, fertilization, and growth of the embryos were as previously described (Ernst et ah, 1980). Cell separations. Mesenchyme blastula embryos were separated into two cell fractions: primary mesenchyme PITTMAN AND ERNST Cell-Specijc and a population of presumptive endoderm and ectoderm (endoderm/ectoderm) as described by Harkey and Whiteley (1982) with minor modification of S. G. Ernst, F. R. Bushman, and W. R. Crain, Jr. (manuscript submitted). Labeling of cells, “Mini-separations” prepared by a modification of the standard large scale procedure, were used for mesenchyme blastula embryos labeled before the cell separation. At the mesenchyme blastula stage 1.2 X lo5 embryos were pelleted at 1200 rpm for 3 min. Embryos were suspended in 12 ml of MPFSW with Pen-Strep (20 units/ml penicillin, 20 pg/ml streptomycin) and a total of 840 &i of [35S]methionine. Embryos were labeled at 12-14°C for 2 hr with constant stirring. If appropriate, a 2-ml aliquot was removed at this time for a sample of mesenchyme blastula labeled before the cell separation. Embryos were pelleted, washed twice in 15 ml of ice-cold CMFSW (calciummagnesium-free seawater) with 100 PM EDTA (ethylenediaminetetraacetic acid), and washed once in 12 ml of 1 Mglycine (pH 8.0). When embryos were dissociated, they were pelleted at 1200 rpm for 3 min and the pellet was resuspended in 1.5 ml 1 M dextrose:CMFSW with 100 PM EDTA (40:60) and Percoll was added to 17.5%. Samples for total mesenchyme blastula embryos labeled after the cell separation were taken at this point, if appropriate. Dissociated embryos, suspended in Percoll, were centrifuged at 1750 rpm for 15 min and the primary mesenchyme and endoderm/ectoderm cell fractions were collected and washed as described for the larger preparations. Isolated primary mesenchyme cells and endoderm/ectoderm cells labeled after the cell separation was suspended in 1 ml of MPFSW with Pen-Strep and incubated at 12-14°C for 30 min, at which time 250 &I of [35S]methionine were added and the cells labeled for 2 hr with constant stirring. Labeling was stopped by pelleting the cells in an Eppendorf centrifuge and washing twice in MPFSW. Sample preparations, quantitations, and electrophv resis. Samples of total embryos or isolated cell populations were suspended and dispersed in lysis buffer (O’Farrell, 1975) containing 9.5 M urea, 2% NonidetP40, and 5% 2-mercaptoethanol. Incorporation of [35S]methionine was determined by trichloroacetic acid precipitation of sample aliquots onto glass fiber filters, followed by scintillation counting in Aquasol (New England Nuclear). The amount of protein in each sample was determined by Bio-Rad protein assay according to the manufacturer’s directions. Samples were frozen and stored at -70°C. Protein samples for electrophoresis were thawed and aliquots precipitated with 8-10 vol of 80% acetone at -20°C. Pellets were collected by centrifugation, dried, and resuspended in 0.1 M Tris (pH 7.6), 5 mM MgC&, 10 mM dithiothreitol, and 1 Protein 237 Synthesis mM PMSF (phenylmethylsulfonylfluoride) with 50 pg/ ml of deoxyribonuclease (Worthington, 2005 D) and 50 pg/ml of ribonuclease A (Sigma). Samples were incubated for 20 min on ice, followed by precipitation with 8-10 vol of 80% acetone at -20°C as above. The dried samples were then resuspended in the lysis buffer plus 2% ampholytes (80% pH 5-7 (LKB), 20% pH 3-10 (BioRad)). Approximately equal amounts of protein of similar specific activities were loaded onto gels. Generally 2.5-5 X lo5 cpm, representing approximately lo20 pg of protein, were loaded per gel. Electrophoresis was as described by O’Farrell (1975). One gel of each focus was run in parallel to determine the pH gradient. On the second dimension, molecular weight markers were run in a well at the end of each gel. Gels were treated with Enhance (New England Nuclear), dried, and exposed to preflashed Kodak XAR-5 film at -70°C for a length of time proportional to the counts loaded on the gel (Laskey and Mills, 1975). Newly synthesized proteins with isoelectric points between 4.5 and 7, in the molecular weight range of lO,OOO-150,000 were compared. RESULTS Changes in protein synthesis between the l&cell stage and mesenchyme blastula embryos. Embryos were labeled in the presence of [35S]methionine for 2 hr, from the late 4-cell stage through the 16-cell stage, and others were labeled for 2 hr at the mesenchyme blastula stage. Total proteins were isolated and separated on two-dimensional gels, followed by fluorography. Although there is substantial overlap in the proteins synthesized at these two stages, there are a number of proteins that appear to be exclusively, or predominantly, synthesized at one stage compared to the other. Of approximately 400 reproducibly resolvable proteins in these gels, the synthesis of 3.8% (15) of these was enriched (at least threefold-determined by visual inspection) in the 16-cell stage and 10.8% (43) was enriched at the mesenchyme blastula stage. Similar observations were reported by Bedard and Brandhorst (1983). Dramatic changes in the pattern of protein synthesis in, cells labeled after the mesenchyme blastula cell separation procedures. To determine the extent of differentiation at the level of protein synthesis exhibited by mesenchyme blastula cells, the embryos were dissociated and a sample taken of the total embryos and the rest were fractionated into primary mesenchyme and endoderm/ectoderm. These three cell populations were incubated in the presence of [35S]methionine for 2 hr. Proteins were isolated from these cell populations and analyzed by two-dimensional gel fluorography. 238 DEVELOPMENTALBIOLOGY Before a detailed comparison of the newly synthesized proteins was made, it was necessary to determined if the cell separation procedure caused any changes in the pattern of protein synthesis. Therefore mesenchyme blastula embryos were labeled for 2 hr with [35S]methionine and the unincorporated label washed out. A sample was taken for protein from unfractionated embryos and the rest of the embryos were fractionated as described for “mini-separations.” Proteins from these three samples were isolated and analyzed VOLUME106.1984 on two-dimensional gels, followed by fluorography. Comparison of the proteins synthesized by cells labeled before and after the cell separation, produced some surprising and unexpected results. Figure 1 represents fluorographs of newly synthesized proteins from primary mesenchyme cells labeled before (A) and after (C) the cell separation and from endoderm/ectoderm cells labeled before (B) and after (D) the cell separation. Total embryos labeled before and after cell dissociation gave essentially the same results as observed for 1 If5 92.5 ($53 x 3 H 2 M - FIG. 1. Comparison of newly synthesized proteins at the mesenchyme blastula stage, labeling before and after the cell separation. Primary mesenchyme cells were labeled before (A) and after (C) the cell separation and endoderm/ectoderm cells were also labeled before (B) and after (D) the separation. 0, Increases in synthesis as a result of cell separation; 0, decreases resulting from cell separation. Each of the increases are also identified by a number for analysis in Table 1. A, actin; T, tubulin. PITTMAN AND ERNST Cell-Speci& endoderm/ectoderm (data not shown). The synthesis of some proteins was induced as a result of the cell separation while the synthesis of others was greatly decreased. Most changes in either direction were common to both cell types, however, there were a few cellspecific changes. Between the two cell populations a total of 37 proteins, marked by squares, showed significant decrease in synthesis (threefold or greater). Of the 37 proteins, 28 were common to both primary mesenchyme cells and the endoderm/ectoderm population. Two proteins, designated a and b, showed a decrease in primary mesenchyme, but no corresponding reduction of synthesis in endoderm/ectoderm. The synthesis of 5 proteins was decreased in endoderm/ectoderm with no corresponding decrease in the primary mesenchyme cells. A total of 20 proteins, marked by circles, were induced as a result of the cell separation procedure. Table 1 presents an analysis of the 20 TABLE SILVER BLASTULA 1 STAIN AND FLITOROGRAPHIC ANALYSIS OF MESENCHYME PROTEINS INDUCED BY THE CELL SEPARATION PROCEDURE Silver staind “S fluorography’ Protein” 1 P 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 P. M. before E./E. before P. M. after E./E. after - + - + + + + + + + + + + + + + + - + + + - - - + + - + + + - + + + + + + + + + + + + 16-Cell Mesenchyme blastula + ++ + ? ++ + ? + ++ ++ - + + + ? + + + + + + - + + + + + ++ ‘Twenty proteins, identified by numeral on Fig. 1, were induced in one or both of the cell fractions as a result of the cell separation procedures. ‘2 represents a cluster of four proteins. ’ Fluorographs were compared of proteins labeled in primary mesenchyme cells before (1A) and after (1C) the cell separation and in endoderm/ectoderm before (1B) and after (1D) cell separation. Undetectable or barely detectable proteins are scored ‘I-” and proteins whose synthesis is significantly induced are marked “+“. “Each of the proteins was identified by silver staining. Proteins clearly identified by silver staining are marked by + and those that are distinctly more abundant in one stage over the other are marked ++. A 1 indicates that the resolution in this area of the gel made definite identification impossible. Protein Synthesis 239 proteins which showed increased synthesis as a result of cell separation. The protein numbers correspond to markings on the fluorographs, with number 2 representing a group of 4 proteins enclosed in parenthesis. The induced synthesis of ten of the proteins was common to both cell populations, while the synthesis of each of the remaining 10 was induced in only one cell population. There is one protein, 12, which was actually turned on in primary mesenchyme cells and off in endoderm/ectoderm. Of approximately 450 proteins, the synthesis of 57, or 12.7% of them, is significantly and reproducibly affected by the cell separation procedure at the mesenchyme blastula stage. We used silver-stained gels of proteins at the 16-cell and mesenchyme blastula stages to determine whether the induced proteins were normal cellular proteins or totally new proteins, present as a result of the stress induced by the cell separation procedure. Table 1 shows that 15 of the 20 proteins are clearly normal cellular proteins, based on silverstain analysis (data not shown). Three additional proteins (12-14) are normally synthesized in endoderm/ ectoderm and induced in primary mesenchyme. The resolution of the gels in the area of protein 4 made it impossible to be sure if 4 is faintly detectable on silver stains. Protein 11 appears to be the only induced protein that is not normally synthesized or detectably present at either the 16-cell or mesenchyme blastula stages. Synthesis of cell-specijk w enriched proteins at the mesenchyme blast&a stage. The experiment in Fig. 1 demonstrated that a comparison of the normal pattern of newly synthesized proteins in primary mesenchyme cells to the normal pattern in endoderm/ectoderm cells has to be made with embryos that were labeled before the cell separation. Figure 2 presents the same fluorographs of newly synthesized proteins in primary mesenchyme (A) and endoderm/ectoderm cells (B) as shown in Fig. 1A and B. These embryos were labeled with [35S]methionine for 2 hr, the unincorporated label washed out, and the embryos harvested and fractionated according to the “mini-separation” procedure. Differences marked between these two cell populations represent reproducible protein differences between the two cell populations as detected on 12 different presumptive endoderm/ectoderm gels from 8 different cell separations and 8 primary mesenchyme gels from 4 different cell separations. Of approximately 450 proteins the synthesis of 13 of these (2.9%), represented by circles, is specific to or enriched (threefold or greater) in primary mesenchyme cells. The synthesis of 37 additional proteins (8.2%), marked by squares, is enriched or confined to the endoderm/ectoderm cell population. No attempts were made to distinguish between DEVELOPMENTALBIOLOGY 240 VOLUME106, 1984 B 200 - 116 - 92.568 m 0 vx z B m 0 40 x b E FIG. 2. Comparison of the newly synthesized proteins in the mesenchyme blastula cell populations. Primary mesenchyme (A) and endoderm/ectoderm cells (B) were labeled before the cell separation. 0, primary mesenchyme-enriched proteins; 0, endoderm/ectodermenriched proteins, A, actin; T, tubulin. qualitative and quantitative synthesis differences since it has been demonstrated that the distinction between them is not absolute (Bedard and Bandhorst, 1983). Since we compared the results of numerous gels from several cell separations to determine reproducibility, there are some protein difference detectable between Figs. 2A and B that are not scored as cell specific. DISCUSSION Analysis of newly synthesized proteins in primary mesenchyme and endoderm/ectoderm cells has demonstrated that, in contrast to the 16-cell stage embryo, the mesenchyme blastula synthesizes cell-specific and enriched proteins. In the course of this investigation it was also discovered that cells labeled after the cell separation procedure had a substantially altered pattern of protein synthesis compared to cells labeled before cell separation. Mesenchyme blastula cells were labeled with [35S]methionine before and after cell separation and analyzed by two-dimensional gel electrophoresis. Micromeres of the 16-cell stage sea urchin embryo are morphologically distinct and strictly determined. However, within the limits of detection, newly synthesized proteins are shared between the micromeres and the mesomeres/macromeres which comprise the rest of the 16-cell stage embryo (Chamberlain, 1977; Tufaro and Brandhorst, 1979; Ernst and Pittman, 1982). We have previously demonstrated that the total polysomal RNA populations in micromeres and mesomeres/mac- romeres, including both abundant and rare sequences, were between 66-100% overlapping (Ernst et cd., 1980). In comparing the 16-cell stage to the mesenchyme blastula stage, synthesis of 3.8% of the proteins was enriched in, or confined to, the 16-cell stage while 10.8% of the newly synthesized proteins were enriched or confined to the mesenchyme blastula. The finding that the synthesis of more proteins is enriched in the more advanced stage of development is consistent with the recent report of Bedard and Brandhorst (1983) that there is a greater number of increases compared to decreases in protein synthesis as development proceeds. Labeling cells before and after embryo fractionation at the two stages produced surprising and important results. Previous reports (Tufaro and Brandhorst, 1979; Harkey and Whiteley, 1983) and our present work (data not shown) demonstrated that at the 16-cell stage, labeling before or after the cell separation appeared to have little effect on the pattern of newly synthesized proteins. However, a substantial difference was seen at the mesenchyme blastula stage. Possible factors responsible for the differences in labeling patterns seen with cells labeled before or after the cell separation fall into two separate, but related, categories. The alteration in the protein synthesis pattern of separated cells may be a response to loss of normal cell-cell or cell-substrate contacts. Alternatively, this may be a more general “stress response” induced by the cell separation procedure. The stress response may include, but would not be limited to lack of normal cell contacts. PITTMAN AND ERNST Cell-Specijc The effect of dissociation on protein synthesis observed here may be similar to reports on tissue culture cells in which it has been demonstrated that disruption of normal cell-cell contacts can lead to considerable quantitative variation in the synthesis of normal cellular proteins (Spiegelman and Farmer, 1982; Farmer et al, 1983). During dissociation of the mesenchyme blastula, not only are cell-cell contacts broken, but cell contacts with the hyaline layer and basement membrane substrates are also disrupted. The blastomeres of the 16-cell stage embryos have smooth membrane surfaces where the cells come in contact with each other. It is late in cleavage that adhesion stabilities among cells increase (Watanabe et al., 1982) and normal cell membrane attachments, such as desmosomes, are formed (Okazaki, 1975). It is also toward the end of cleavage when the basement membrane starts to form. If the dramatic change in the protein synthesis pattern seen in mesenchyme blastula cells following dissociation is due to the disruption of cell-cell and cell-surface contacts, it is consistent that we do not observe these protein changes at the 16-cell stage, before the cellcell and cell-surface contacts have been established. In a recent study Harkey and Whiteley (1983) report that isolated micromeres grown in culture for 90 hr and primary mesenchyme cells grown in culture for 50 hr, synthesized similar proteins when they both reached 98 hr of development. During these extended culture conditions, the cells are able to reestablish their normal cell-cell and, at least in the case of those isolated at the mesenchyme blastula stage, cell-substrate contacts (Okazaki, 1975; Harkey and Whiteley, 1983). We demonstrate that the pattern of protein synthesis is significantly altered in mesenchyme blastula cells due to the cell separation. Determination of whether or not this is a general “stress response” would require additional information. The lack of response at the 16cell stage to dissociation, compared to the strong response in mesenchyme blastula embryos, is similar to the situation observed when sea urchins were “heat shocked.” Exposing embryos to elevated temperatures at any developmental stage decreased the overall rate of protein synthesis, but it was not until after hatching that specific heat-shock proteins were synthesized (Roccheri et al., 1981). As shown in Table 1, at least 15 of the 20 proteins induced by the cell separation procedure are proteins that are present in sufficient abundance to be detected by silver-stain analysis. Interestingly, half of these silver-stained proteins, including the cluster of 4 proteins labeled 2 (Fig. 2), are significantly more abundant in 16-cell stage embryos when compared to mesenchyme blastula. Cell separation inducing the synthesis of proteins at the mesenthyme blastula stage that normally are synthesized at Protein Synthesis 241 other developmental stages is particularly interesting in light of the results of two recent studies. In Drosophila, it has been shown that proteins very similar to heat shock proteins are synthesized in non-heat shocked adult tissues (Craig et ah, 1983). In the mouse, two of the first normal major zygotic proteins of the embryo are identical to mouse heat-shock proteins HSP68 and ‘70 (Bensaude et al., 1983). The significant alteration in the pattern of protein synthesis, including both inhibition and induction of proteins, in mesenchyme blastula cells labeled before and after the cell separation, was about equal to the number of changes in protein synthesis in going from 16-cell stage to mesenchyme blastula. Bruskin et al. (1982) also report observing alterations in the pattern of newly synthesized proteins in sea urchin cells following a similar dissociation, but do not characterize these alterations. Harkey and Whiteley (1982) reported no difference between the pattern of proteins synthesized in mesenchyme blastula cells labeled before or after the cell separation procedure. The conflicting reports on the effect of the cell separation on the pattern of protein synthesis cannot be explained by the cell separation procedure itself, since both studies use essentially the same method. However, several possibilities for this difference do exist. The experiment we report in Fig. 1 and Table 1 was designed to detect any changes caused by the cell separation procedure used by Harkey and Whiteley (1982) and ourselves, and our results are representative of several gels of total embryo, primary mesenchyme, and endoderm/ ectoderm proteins. Since they report considerable difficulty labeling primary mesenchyme cells with [3H]valine before the cell separation, Harkey and Whitely (1982) compared primary mesenchyme cells labeled after the cell separation to endoderm/ectoderm cells labeled before the cell separation. In their study, in the one experiment in which primary mesenchyme cells were labeled before the cell separation, at least 60% of the cells were endoderm/ectoderm and the cell separation and gel system they used were different from those employed in the rest of the study. Therefore, the only comparison made of primary mesenchyme cells labeled before and after the cell separation was between cells isolated by different procedures and proteins separated on a different gel system. In addition to possessing an ability to alter protein synthesis in response to environmental factors, the cells of the mesenchyme blastula embryo are different from 16-cell stage blastomeres in that the cells of distinct lineages have nonidentical patterns of protein synthesis. Synthesis of 2.9% of the proteins at this stage is primary mesenchyme enriched or specific, and 8.2% is endoderm/ectoderm enriched or specific. The 242 DEVELOPMENTAL BIOLOGY higher percentage of endoderm/ectoderm enriched proteins, relative to primary mesenchyme, probably foretells the immediate future of these cells. Within a few hours after the mesenchyme blastula stage, the cells of the endoderm/ectoderm will separate into three distinct cell populations, recognizable by morphology and position: endoderm, ectoderm, and secondary mesenchyme. Mesenchyme blastula embryos show changes, including increases and decreases, of 14.6% of the newly synthesized proteins compared to the 16-cell stage. Bedard and Brandhorst (1983), analyzing about twice as many proteins as in the present study, report a similar change in protein synthesis, 11.2%, during the same developmental time. It has been reported (Harkey and Whiteley, 1982) that 28% of the newly synthesized proteins are cell enriched or specific at the mesenchyme blastula stage. This is twice that demonstrated for the percentage of change between the 16cell stage, when there is no blastomere-enriched synthesis, and the mesenchyme blastula stage. Because of the significant alterations resulting from the cell separation procedure, and since Harkey and Whiteley (1982) compared endoderm/ectoderm labeled before the cell separation procedure to primary mesenchyme cells labeled after the cell separation, it is possible that their study represents an overestimate of cell enriched/specific protein synthesis at the mesenchyme blastula stage. We report here that the synthesis of 11% of the 450 most abundantly synthesized proteins at the mesenchyme blastula stage is cell specific or enriched. We thank Andre Bedard in Dr. Bruce Brandhorst’s laboratory for initial instructions in running two-dimensional gels. We also thank Dr. W. R. Crain and Dr. S. Slapikoff for critically reading this manuscript. The work was supported by an NIH grant and a grant from Tufts University Biomedical research funds to S.G.E. REFERENCES ALEXANDRAKI, D., and RUDERMAN, J. V. (1981). 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