ing. A mechanistic link between an inherited and an acquired cardiac arrhythmia: HERG encodes the IKr potassium channel. Cell 81: 299–307, 1995. 11. Sanguinetti, M. C., and M. T. Keating. Role of delayed rectifier potassium channels in cardiac repolarization and arrhythmias. News Physiol. Sci. 12: 152–157, 1997. 12. Shibasaki, T. Conductance and kinetics of delayed rectifier potassium channels in nodal cells of the rabbit heart. J. Physiol. (Lond.) 387: 227–250, 1987. 13. Spinelli, W., I. F. Moubarak, R. W. Parsons, and T. J. Colatsky. Cellular electrophysiology of WAY-123,398, a new class III antiarrhythmic agent: specificity of IK block and lack of reverse use dependence in cat ventricular myocytes. Cardiovasc. Res. 27: 1580–1591, 1993. 14. Warmke, J. W., and B. Ganetzky. A family of potassium channel genes related to eag in Drosophila and mammals. Proc. Natl. Acad. Sci. USA 91: 3438–3442, 1994. 15. Weinsberg, F., C. K. Bauer, and J. R. Schwarz. The class III antiarrhythmic agent E-4031 selectively blocks the inactivating inward-rectifying potassium current in rat anterior pituitary tumor cells (GH3/B6 cells). Pflügers Arch. 434: 1–10, 1997. Probing Nanometer Structures with Atomic Force Microscopy Zhifeng Shao Atomic force microscopy (AFM) can generate high-resolution images of the surface of biological specimens and can also probe the interactions between and within single macromolecules. Thus isolated heterogeneous biological structures can be studied in submolecular detail with AFM. L “. . .AFM detects deflections of a very soft cantilever with a sharp tip. . . .” ight microscopy (LM) and electron microscopy (EM) have become essential tools in biology over the past decades. In fact, most of our knowledge about the structure of cells and organelles has been obtained with these wellestablished techniques. However, it is well known that the resolution of LM is limited by diffraction and is therefore not appropriate for structural studies at the molecular level. EM, on the other hand, can achieve atomic resolution, but the intrinsic contrast of biological materials is so low that either contrast-enhancing agents (i.e., negative stains or metal shadowing) or image averaging (cryo-EM) is often required. Such fundamental limitations are not expected to be circumvented in the near future. However, a recent and very exciting development, atomic force Z. Shao is in the Department of Molecular Physiology and Biological Physics of the University of Virginia, PO Box 10011, Charlottesville, VA 22906-0011, USA. 142 News Physiol. Sci. • Volume 14 • August 1999 microscopy (AFM), has demonstrated great potential (1) as a complementary technique to these traditional methods, which is not limited by the same fundamental physical laws. Different from any other microscopic technique, AFM detects deflections of a very soft cantilever with a sharp tip that is in physical contact with the specimen while it raster scans across the surface (Fig. 1). As such, its resolution will be determined by the sharpness of the tip apex and the deformation of the specimen under the tip pressure (12). Neither of these factors is a fundamental limitation, and they will be continuously improved over time. For hard, crystalline specimens, it is not difficult to obtain atomic scale features, even under ambient conditions (Fig. 1, background). With biological macromolecules, when reliably adsorbed to a flat substrate, a basic requirement of this technique, the AFM has also achieved considerable success either in aqueous solution or under cryogenic temperatures (for 0886-1714/99 5.00 © 1999 Int. Union Physiol. Sci./Am.Physiol. Soc. Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 4. Bauer, C. K., B. Engeland, I. Wulfsen, J. Ludwig, O. Pongs, and J. R. Schwarz. RERG is a molecular correlate of the inward-rectifying K current in clonal rat pituitary cells. Receptors Channels 6: 19–29, 1998. 5. Bauer, C. K., W. Meyerhof, and J. R. Schwarz. An inwardrectifying K+ current in clonal rat pituitary cells and its modulation by thyrotrophin-releasing hormone. J. Physiol. (Lond.) 429: 169–189, 1990. 6. Chiesa, N., B. Rosati, A. Arcangeli, M. Olivotto, and E. Wanke. A novel role for HERG K+ channels: spike-frequency adaptation. J. Physiol. (Lond.) 501: 313–318, 1997. 7. Corrette, B. J., C. K. Bauer, and J. R. Schwarz. Electrophysiology of anterior pituitary cells. In: The Electrophysiology of Neuroendocrine Cells, edited by H. Scherübl and J. Hescheler. Boca Raton, FL: CRC, 1995, p. 101–143. 8. Jan, L. Y., and Y. N. Jan. Cloned potassium channels from eukaryotes and prokaryotes. Annu. Rev. Neurosci. 20: 91–123, 1997. 9. Pongs, O. Molecular biology of voltage-dependent potassium channels. Physiol. Rev. 72: S69–S88, 1992. 10. Sanguinetti, M. C., C. Jiang, M. E. Curran, and M. T. Keat- review, see Ref. 12). More recently, AFM has been extended to probe inter- and intramolecular interactions, taking advantage of AFM as a sensitive force sensor (3, 11). The purpose of this article is to provide a brief review of the recent achievements of biological AFM with several examples to illustrate possible utilities of this novel technique. Molecular details have been resolved by AFM under physiological solutions AFM has been successfully applied to both soluble proteins and membrane proteins under aqueous solutions (12). In some cases, the attainable resolution has been sufficient to resolve some secondary structures on the surface of a protein (9). One example is the cochaperonin GroES, a heptameric 70-kDa protein from Escherichia coli, as shown in Fig. 2A (9). The molecules are directly adsorbed to the surface of mica. The seven spokes seen on top of each GroES are formed by single β-turns, directly resolved without image averaging. This perhaps represents one of the highest-resolution structures News Physiol. Sci. • Volume 14 • August 1999 “. . .the presence of the lipid bilayer provides an additional stabilizing factor. . . .” Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 FIGURE 1. In atomic force microscopy (AFM), a focused laser beam is used to monitor the movement of the cantilever, which can be controlled with a feedback circuit to control the piezo scanner. The critical components are shown here: laser diode (1), focusing lens (2), cantilever with tip (3), split diode (4), specimen (5), and piezo scanner (6). When the bending of the cantilever is maintained as a constant, the surface topology is obtained (equiforce surface contour). With crystalline specimens, atomic resolution is not difficult to obtain, as shown in the background, where a mica image is presented (lattice spacing: ~5Å). Because the cantilever is also a very sensitive force sensor, it is also used to measure molecular interactions by monitoring the bending of the cantilever when the tip is pulled away from the surface. To image biological materials, macromolecules must be adsorbed to a flat substrate (mostly mica) with high stability. Otherwise, the molecules can be easily swept away by the scanning tip. so far resolved by AFM. All of the dimensions measured in the AFM are in very good agreement with the X-ray structure. One of the critical factors found for attaining such high resolution is close packing. Because even 1-nN probe force can produce a pressure of >1,000 atm within the tip-sample contact for an area of 1 nm2 (12), it is conceivable that when closely packed, not only can the neighboring molecules stabilize the molecule being imaged, but they can also help to reduce the contact pressure to some degree. Chemical crosslinking, in some instances, has also been effective for achieving a higher resolution (9), suggesting that structural deformation caused by the probe may still be greater than desired. Some investigators have taken advantage of this greater force to dissect macromolecules, such as the gap junctions (6) and the chaperonin GroEL (9), exposing their internal structures for imaging, an aspect rather unique to the AFM. Obviously, two-dimensional (2-D) crystals are perhaps the most closely packed specimens, so they might be expected to be ideal for AFM imaging. Shown in Fig. 2B is an image of the bacteriophage φ29 connector, through which the virus genome is delivered into the host cell (10). The connector itself has a tapered shape with 12 subunits resolved in the wide end, and 2 such connectors form the unit cell in an antiparallel arrangement. The dimensions, including the height of the connector, the central channel, and the diameter of both ends, have been determined to nanometer precision. These results have been used to refine the previous model of the connector and to help resolve the controversy over the exact number of subunits. For membrane proteins, the presence of the lipid bilayer provides an additional stabilizing factor, which has enabled several high-resolution studies. One example is the cholera toxin B oligomer (Fig. 2C) bound to its membrane receptor, the ganglioside Gm1 (14). The pentameric structure of this 60-kDa toxin is well resolved. In this case, because the binding affinity is so high (pM range), the specimen was quite stable and a substantial force (~1 nN) was required to remove the toxin from its receptor. More recently, the AFM has been successfully extended to the study of several pore-forming bacterial toxins. An example is shown in Fig. 2D, where an image of α-hemolysin (α-toxin) from Staphylococcus aureus, inserted into a pure lipid membrane, is presented. In this supported bilayer, α-toxin readily formed these 2-D crystallites, and within each oligomer, six subunits are clearly resolved (2). These results differ from the heptameric X-ray structure where the crystallization was achieved with a detergent mixture. Even though this 143 “. . .one can directly resolve the number of subunits within individual oligomers. . . .” 144 important difference has not been reconciled, this AFM study does demonstrate the relevance of resolving molecular details under more natural conditions. It should be pointed out that the α-toxin has long been considered a hexamer, but the averaging techniques employed to arrive at this conclusion were often under close scrutiny. With the high contrast attainable in the AFM, this is no longer a problem, as one can directly resolve the number of subunits within individual oligomers (Fig. 2D). Similar techniques have also been applied to other bacterial toxins, including the cholesterol-binding toxin perfringolysin, the pore-forming aerolysin, and the vacuolating News Physiol. Sci. • Volume 14 • August 1999 toxin vacA from Helicobacter pylori, implicated as a major determinant of peptic ulcers. At present, a major difficulty has been the inability to reconstitute integral membrane proteins into supported phospholipid bilayers at very high density, but 2-D crystalline sheets developed for EM should be equally suitable for the AFM as demonstrated by Fig. 2B. With advances of preparatory techniques, channels and transporters should be amenable to AFM, and the different conformations may be accessible to analysis at the nanometer scale. In addition to imaging proteins, a noteworthy application is the imaging of plasmid DNA Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 FIGURE 2. Several representative examples of high-resolution AFM achieved under aqueous solution. A: a surface rendition of the cochaperonin GroES (70 kDa) from E. coli. This structure is identical to that of the X-ray model, and a comparison indicates that the 7 spokes at the center are composed of single β-turns, suggesting that secondary structural features might be resolvable under most favorable conditions. Chemical crosslinking is shown to improve the resolution to some degree. Scale bar: 5 nm. B: a surface rendition of the bacteriophage φ29 connector in a 2-dimensional (2-D) crystalline sheet. The connector is seen in an antiparallel arrangement. Within each connector, individual subunits are resolved. Such 2-D crystals are also amenable to most image processing routines to improve the fidelity of the results. Scale bar: 10 nm (x, y); 6 nm (z) (courtesy of Dr. D. Mueller, University of Basel). C: cholera toxin B oligomer (60 kDa) bound to its receptor Gm1 in a lipid bilayer. Such membrane-associated proteins should be among the easiest for the AFM to study, and the technique has already been extended to study other proteins, either naturally membrane-associating proteins or those through specific modifications. Scale bar: 5 nm (x, y); 2.5 nm (z). D: αhemolysin from S. aureus in a supported bilayer. This pore-forming toxin can insert into supported bilayers to form small 2-D crystallites. However, both the subunit stoichiometry and the overall diameter revealed by AFM are different from the X-ray structure. The reconciliation of these differences may further our understanding of the oligomerization process of membrane proteins. Scale bar: 10 nm (x, y); 1.5 nm (z). adsorbed to a positively charged lipid bilayer (8). Surprisingly, even with only partial charge neutralization, the supercoiled plasmids adopted a highly condensed phase with quasi-parallel packing on the bilayer surface. The stabilizing effect of such close packing has enabled the direct resolution of the major grooves of the DNA double helix. This highly condensed phase was later corroborated by X-ray studies of multilamellar aggregates, and such highly ordered arrangements may be relevant to the efficiency of gene delivery via cationic liposomes. Because AFM is capable of imaging in aqueous solution, an exciting possibility is to capture structural (conformational) changes in real time, which would permit the making of “movies” of macromolecules in action. Although this worthy goal has not been fully achieved because of the potential disturbance of the structure being studied by the tip and the relatively slow frame time of the instrument (seconds), encouraging progress has been made in the past few years, indicating that at least under certain conditions, such experiments can be successful. A simpler but less biologically relevant example is shown in Fig. 3a, where two successive frames depict the progression of the ripple phase formation in a gel-phase supported phosphatidylcholine bilayer. In this case, the process takes many hours to complete, perhaps because of the interaction with the substrate (mica), which has significantly slowed down the transition. A more exciting example is the observation of the motion and rearrangement of the actin cytoskeleton in living glial cells (Fig. 3b). At the periphery of the cell, the submembrane cytoskeleton can be resolved as the AFM tip scans over the surface of the cell, and the movement of the actin filaments is clearly seen in these frames taken a few minutes apart (5). This and other similar studies show that the cells remain viable under the probing tip for many hours, and laser irradiation does not seem to pose a serious problem for the cell. However, these studies also show that the cell membrane is much too compliant for the AFM, and severe deformation often occurs during imaging. As a result, the resolution achieved has been relatively low, and membrane components, such as individual receptors or transporters, have not been resolved. Whether this can be significantly improved remains to be seen. At the molecular level, a significant development is the observation of RNA polymerase transcribing a piece of DNA (7). This is an extremely “. . .the submembrane cytoskeleton can be resolved. . . .” Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 Structural dynamics may be accessible to AFM observations difficult experiment, because to retain the activity of the enzyme, the adhesion to the substrate must be weak. As a result, the molecules could be easily scraped away by the scanning tip. To overcome this problem, a novel imaging mode, the tapping mode, in which the tip oscillates at a relatively high frequency and only makes transient contact with the sample in each cycle, must be used. As shown in Fig. 3c, the movement of the RNA polymerase is clearly captured in these successive frames. This is certainly a major technical advance, although at this stage the resolution is relatively low and the enzymatic activity much reduced. Thus major improvements are still required before this type of application can yield useful new information. Flexible structures are well resolved in the cryo-AFM at high resolution Despite the recent success, a major limitation remains: the deformation of flexible structures under the AFM tip. As many studies attest, large molecular complexes, from immunoglobulins to the membrane of cells, are too soft for high-resolution imaging at room temperature. To overcome these problems, several groups attempted to build AFMs that could image at cryogenic temperatures. However, because of technical complications and especially the problem of protecting the specimen from contamination (because of condensation of water and other contaminants onto the specimen), this goal was only recently achieved with a system operated in liquid nitrogen vapor under ambient pressure (4). At a temperature close to that of liquid nitrogen, the structural rigidity of most macromolecules has been shown to be much greater, and the adhesion to the substrate is also improved. Most importantly, the trapping effect of the liquid nitrogen pool in the system has effectively eliminated surface contamination. Combined with a stable temperature control and high mechanical stability, the cryo-AFM has achieved the same resolution as that at room temperature, and imaging of biological structures has been highly reproducible (4). Several interesting applications of the cryoAFM are shown in Fig. 4. Figure 4a is a stereograph of purified immunoglobulin M (IgM), adsorbed to mica. The specimen was dehydrated before freezing, but no other treatment was applied. Although the general dimensions are consistent with those observed by EM with negatively stained specimens, which has served as the basis for the current model of IgM, the threedimensional (3-D) structure of IgM as seen in the cryo-AFM clearly indicates that IgM has a nonNews Physiol. Sci. • Volume 14 • August 1999 145 planar conformation with the Fc domains (center) protruding out from the plane of the Fab domains, in contrast to the previous planar model. How to accommodate a nonplanar IgM into the current molecular model of complement activation (classical pathway) remains to be worked out. Figure 4b shows an image of smooth muscle myosin (15). Of particular interest is the ability to clearly resolve the regulatory and motor domains within each individual myosin head, where the dimensions agree with 146 News Physiol. Sci. • Volume 14 • August 1999 the crystal structure of S1 solved by Rayment and colleagues. This result raises the possibility that when intact myosin interacts with filamentous actin, which has also been imaged at high resolution revealing the actin monomers, conformational changes within the myosin head under various conditions may be directly observable, given the 4- to10-nm movement of the cross-bridge stroke suggested by most models. Without the need for averaging over an ensemble of molecules, heterogeneous speci- Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 FIGURE 3. Examples of real-time observation of dynamic processes with the AFM. a: With a supported gel-phase phosphatidylcholine bilayer, the so-called ripple phase can be induced with external agents or temperature. In these images taken some minutes apart, the progression of the ripples is clearly depicted. Such observations may provide a more complete description of this interesting but not fully understood phenomenon. b: With living glial cells, the submembrane skeletal structures have been observed. Toward the edge of the cell where the thickness is much smaller than that near the nucleus, the movement/rearrangement of the actin filaments can be seen in these images taken a few minutes apart (courtesy of Dr. E. Henderson, Iowa State University). c: With a carefully controlled adhesion to the substrate, the transcription process of E. coli RNA polymerase was also observed in real time (transcription rate was much lower when enzyme was adsorbed to substrate). Note the change in length of the DNA on either side of the enzyme in these images taken ~4 min apart (courtesy of Drs. P. K. Hansma, B. Smith, N. Thomson, and S. Kasas, University of California, Santa Barbara). Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 FIGURE 4. Several applications of cryo-AFM. a: A stereo view of purified human immunoglobulin M (IgM) adsorbed to mica. Note the central protrusion, suggesting that the Fc domains and the J chain are not in the same plane as the Fab domains. In other words, each immunoglobulin G (IgG)-like subunit is bent. The implications of this structure on the molecular model of complement activation (classical pathway) have not been examined. b: Smooth muscle myosin purified from turkey gizzard. Note the excellent contrast of the image and the well-defined molecular contours. Within each myosin head, the regulatory domains can be recognized from the motor domain (right; scale bar: 20 nm). This raises the possibility of directly observing the structural changes during contraction. c: Chromatin fibers purified from chicken erythrocytes. Each nucleosome (~12-15 nm) is well resolved, along with the linker DNA between the nucleosomes. Given the resolution, other components, if present, such as a transcribing RNA polymerase or transcription factor complexes, should be resolvable. mens, characteristic of the weakly bound states, although challenging, should remain amenable to analysis. Such studies have the potential to provide additional insight into the working mechanism of muscle contraction. Another interesting example is purified chromatin fragNews Physiol. Sci. • Volume 14 • August 1999 147 “. . .using modified nanotubes as the tip to sense the chemical interaction. . . .” Probing ligand receptor interaction and protein folding Because the AFM is also a very sensitive force sensor when soft cantilevers (k , , 0.01 nN/nm) are used, it has been used to probe molecular interactions between single molecules. Although the sensitivity of the optical detection system has the ability to detect sub-piconewton forces, the thermal fluctuation of the cantilever has limited this measurement to the 10 pN range. The possibility of reducing the limiting thermal noise is currently under investigation in several laboratories. Force measurements can be conducted with relative ease with simple modifications to the tip. For example, with biotin attached to a tip and streptavidin immobilized on a substrate, the force required to pull the two apart has been measured to be on the order of several hundred piconewtons (3). This is a relatively large force, but given the extremely high affinity of biotin to streptavidin, this magnitude of force is not surprising. However, it should be pointed out that it 148 News Physiol. Sci. • Volume 14 • August 1999 has been difficult to directly link rupture force to the binding free energy, because during the rupture process the AFM has been probing nonequilibrium states. Several solutions to this difficulty have been suggested but are beyond the scope of this article. A further extension of this technique is to observe the unfolding of multi-domain fibrous proteins, such as the giant muscle protein titin (11). With one end of the protein attached to the tip and the other to the substrate, upon retraction of the tip, the unfolding of each Ig-like domain was observed in real time. It was shown that before unfolding, each domain behaves elastically, but at the threshold, it unfolds to an extended state of 25 nm in length. The threshold force was shown to depend on the pulling speed, clearly indicating the nonequilibrium nature of these measurements. So far, the opposite, but more interesting, process of folding of a protein has not been directly observed because of technical limitations. An improved force sensitivity and precise positional control would be required for achieving such a goal. Even for a partial construction of the energy landscape, a detailed description of the folding pathway must be obtained. The recent demonstration of using modified nanotubes as the tip to sense the chemical interaction between the tip and the sample should have great potential to provide a high spatial resolution map of the specimen surface (13). Because in this case, the dimension of the tip is well controlled and only the end of the carbon nanotube is functionalized, the reproducibility of such experiments should improve and the lifetime of the tip should extend. The latter is required if it is to be useful for imaging purposes. On the basis of these latest developments, it is almost certain that in the near future, one should be able to attach any molecule to the tip as the sensor to “fish” out its partner in the cell membrane, thus addressing such fundamental issues as domain organization, receptor localization, and functional redistribution. Another recent report suggests that surface charges on a biological specimen may be directly mapped at severalnanometer resolution with the tapping-mode AFM under aqueous solutions at low ionic strength, raising the possibility of directly resolving an active ion channel in a membrane. It is not an exaggeration to consider the development of the AFM, as well as other related probe techniques, as the most exciting advance in the field of biological microscopy in recent years. Its limitations notwithstanding, AFM does provide a most direct approach for structural studies of biological surfaces and for probing into the details of Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 ments, as shown in Fig. 4c. In this image, each individual nucleosome is well resolved and appears to have a rather random orientation with a lateral dimension similar to those determined by EM and X-ray crystallography. Furthermore, almost all linker DNA segments can be recognized, providing a direct measure of their length, a critical parameter in the construction of a packing model for the chromatin, the higher-order structure of which remains unresolved. With a closer examination of the images, it is suggestive that the linker histones might have been resolved. If so, its effect on the structure of chromatin could be directly examined. A major developmental effort is the combination of the cryo-AFM with the well-established technique of deep etch and freeze fracture, because at present specimens are dehydrated before imaging. Rapid freezing should protect biological structures from degradation or prevent dissociation of oligomeric proteins during cooling, as well as trapping intermediate states of a complex. With better-preserved specimens, it is also possible to further improve the resolution of the cryo-AFM. Furthermore, fracture will allow the elucidation of the integral membrane segments of a protein, providing a new technique for determining its membrane topology. An extension of the fracture technique is to combine etch and sectioned removal of the specimen surface. If well controlled, this will allow the 3-D imaging of large structures at nanometer resolution, which could not be achieved with any available technology. macromolecular interactions. With the rapid technical advance of this novel technology, there is no doubt that many exciting discoveries will be uncovered in the years to come, and the AFM will soon establish itself as one of the widely applied techniques in biomedical research. We have not yet reached the limit of its potential. References 1. Bennig, G., C. Quate, and C. Gerber. Atomic force microscope. Phys. Rev. Lett. 56: 930–933, 1986. 2. Czajkowsky, D., S. Sheng, and Z. Shao. Staphylococcal α-hemolysin can form hexamers in phospholipid bilayers. J. Mol. Biol. 276: 325–330, 1998. 3. Florin, E., V. Moy, and H. Gaub. Adhesion forces between individual ligand receptor pairs. Science 264: 415–417, 1994. 4. Han, W., J. Mou, J. Sheng, J. Yang, and Z. Shao. Cryo atomic force microscopy: a new approach for biological imaging at high resolution. Biochemistry 34: 8215–8220, 1995. 5. Henderson, E., P. Hayelon, and D. Sakaguchi. Actin filament dynamics in living glial cells imaged by atomic Downloaded from http://physiologyonline.physiology.org/ by 10.220.32.246 on June 18, 2017 I thank Prof. A. V. Somlyo and D. Czajkowsky for a critical reading of the manuscript. I also thank Drs. D. Mueller, E. Henderson, P. K. Hansma, B. Smith, N. Thomson, and S. Kasas for the use of their images and S. Sheng for the preparation of the figures. The work from this laboratory was supported by the National Institutes of Health, the National Science Foundation, and the American Heart Association. I apologize for not being able to include many other excellent references because of strict space limitations. force microscopy. Science 257: 1944–1946, 1992. 6. Hoh, J., R. Lal, S. John, J. Revel, and M. Arnsdorf. Atomic force microscopy and dissection of gap junctions. Science 253: 1405–1408, 1991. 7. Kasas, S., N. Thomson, B. Smith, H. Hansma, X. Zhu, M. Guthold, C. Bustamante, E. Kool, M. Kashlev, and P. Hansma. E. coli RNA polymerase activity observed using atomic force microscopy. Biochemistry 36: 461–468, 1997. 8. Mou, J., D. Czajkowsky, Y. Zhang, and Z. Shao. High resolution atomic force microscopy of DNA: the pitch of the double helix. FEBS Lett. 371: 279–282, 1995. 9. Mou, J., S. Sheng, R. Ho, and Z. Shao. Chaperonins GroEL and GroES: views from atomic force microscopy. Biophys. J. 71: 2213–2221, 1996. 10. Muller, D., A. Engel, J. Carrascosa, and M. Velez. The bacteriophage φ29 head tail connector imaged at high resolution with the atomic force microscope in buffer solution. EMBO J. 16: 2547–2553, 1997. 11. Rief, M., M. Gautel, F. Oesterhelt, J. Fernandez, and H. Gaub. Reversible unfolding of individual titin immunoglobulin domains by AFM. Science 276: 1109–1112, 1997. 12. Shao, Z., J. Mou, D. Czajkowsky, J. Yang, and J.-Y. Yuan. Biological atomic force microscopy: what is achieved and what is needed. Adv. Phys. 45: 1–86, 1996. 13. Wong, S., E. Joselevich, A. Woolley, C. Cheung, and C. Lieber. Covalently functionalized nanotubes as nanometer sized probes in chemistry and biology. Nature 394: 52–55, 1998. 14. Yang, J., L. Tamm, T. Tillack, and Z. Shao. New approach for atomic force microscopy of membrane proteins: the imaging of cholera toxin. J. Mol. Biol. 229: 286–290, 1993. 15. Zhang, Y., Z. Shao, A. P. Somlyo, and A. V. Somlyo. Cryo atomic force microscopy of smooth muscle myosin. Biophys. J. 72: 1308–1318, 1997. Hepatic Regeneration—Revisiting the Myth of Prometheus Victor Ankoma-Sey Myriad signals such as growth factors, cytokines, growth inhibitors, hormones, ions, extracellular matrix, and the resident hepatic cells are involved in the regulation of hepatic regeneration. These regulatory factors ultimately mediate changes in gene expression, a critical step in this well-orchestrated restorative process. T he liver is a remarkable organ, given its inherent capacity to fully restore itself after significant hepatic tissue loss either from partial hepatectomy (PHx) or acute liver injury. The tremendous regenerative potential of the liver has been recognized since ancient times. In classical Greek mythology, Prometheus, after stealing the V. Ankoma-Sey is in the Division of Gastroenterology, Hepatology, and Nutrition at the University of Texas-Houston Medical School, 6431 Fannin, Houston, TX 77030, USA. 0886-1714/99 5.00 © 1999 Int. Union Physiol. Sci./Am.Physiol. Soc. secret of fire and introducing it to earthlings, was punished by having an eagle of Zeus feast daily on his liver. His punishment was the ultimate torture, as his liver regenerated eternally while the eagle continued his perpetual daily feeding sessions from a constantly replenished source. The classical model of hepatic regeneration is that of partial hepatectomy in which ~70% of the liver is resected. The remaining lobes enlarge and reconstitute the original size of the liver. Hepatic regeneration after PHx in the rat takes 5-7 days. News Physiol. Sci. • Volume 14 • August 1999 “. . .having an eagle of Zeus feast daily on his liver.” 149
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