CHAPTER 2.3.4. 1 2 3 SPHERICAL BACULOVIROSIS (PENAEUS MONODON-TYPE BACULOVIRUS) 4 1. 5 6 7 8 9 For the purpose of this chapter, spherical baculovirosis is considered to be infection with Penaeus monodon-type baculovirus. Synonyms: MBV from P. monodon was designated PmSNPV (for singly enveloped nuclear polyhedrosis virus from P. monodon) in accordance with the guidelines for virus nomenclature published by the International Committee on Taxonomy of Viruses (ICTV) (37), and it appears as the tentative species P. monodon NPV, or PemoNPV, in the 7th and 8th Reports of the ICTV (15, 49). Although PemoNPV may be the most correct name for the virus, the term P. monodon baculovirus (MBV) will be used in most instances to designate this virus in this Aquatic Manual. 10 2. Scope Disease information 11 2.1. Agent factors 12 2.1.1. 13 14 15 16 17 18 The aetiological agent is Penaeus monodon baculovirus (MBV) (30, 32, 36). The International Committee on Virus Taxonomy lists MBV (spherical baculovirosis) as a tentative species named PemoNPV in the genus Nucleopolyherdovirus (15). Based on the wide geographical and host species range of MBV, the existence of different strains of MBV is likely. Polymerase chain reaction (PCR) tests designed for East and South-East Asian isolates of MBV have recently been shown to give false-negative test results for MBV-infected P. monodon from Africa (Lightner, unpublished data) further suggesting that MBV (or the species PemoNPV) is made up of more than one strain 19 2.1.2. 20 21 22 23 24 MBV produces a specialised tetrahedral occlusion body in which virions are embedded in a crystalline protein (polyhedron) matrix (46). In insects, the occlusion body’s function is to protect the occluded virions from the environment until ingested by a suitable host. The occlusion body of MBV is expected to serve the same function. It is assumed that virions in occlusion bodies remain infectious for months to years in the sediments (e.g. of estuaries or culture ponds) and that they are essential to the infection cycle of MBV in different generations occupying the same nursery areas. 25 26 Free (non-occluded) virions are more subject to degradation by sunlight (UV), desiccation, microbial degradation, etc., than are occluded virions and they are believed to remain infectious from no more than a few hours to a few days outside a host. 27 2.1.3. 28 29 Inactivation of the related occluded baculovirus (Baculovirus penaeid – BP) by disinfectants, low pH, heat and UV irradiation has been reported (22). 30 31 Desiccation (‘dry-outs’) for control of baculovirosis is routinely used in shrimp hatcheries to disinfect spawning tanks, larval rearing tanks and nursery tanks (see Chapter 1.1.5 Methods for disinfection of aquaculture establishments). 32 2.1.4. 33 MBV replicates in the host cell nucleus. Host-to-host transmission is per os ( 6, 21, 22, 26, 45). Aetiological agent, agent strains Survival outside the host Stability of the agent (effective inactivation methods) Life cycle Manual of Diagnostic Tests for Aquatic Animals 2009 1 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 34 2.2. Host factors 35 2.2.1. 36 37 38 39 40 41 42 MBV infections have been reported in one or more species of the following penaeid genera/subgenera1: Penaeus, Metapenaeus, Fenneropenaeus and Melicertus (14, 18, 23, 26, 30, 44). Experimental water-borne and per os challenge of the Japanese tiger shrimp, Marsupenaeus japonicus, 1-day-old postlarvae (PL) with MBV failed to produce detectable infections (17). Likewise, despite the simultaneous culture of MBV-infected P. monodon in a number of Western Hemisphere farms, and the consequent direct exposure of certain Western Hemisphere penaeids (specifically Penaeus (Litopenaeus) vannamei, P. (L.) stylirostris and Farfantepenaeus californiensis) to MBV, the virus did not produce infections in these species, nor has it become established in the shrimp farms or in wild stocks of exposed regions (26, 32). 43 2.2.2. 44 All life stages, except eggs and nauplii, are susceptible to infection by MBV. 45 2.2.3. 46 47 48 49 MBV infection is typically most severe (and most readily diagnosed with simple wet-mount methods) in the larval and early PL stages and in adult females in spawning conditions. Diagnosis is accomplished by demonstration of prominent clusters of spherical occlusion bodies in simple wet-mounts (stained or unstained) of whole larvae, in the hepatopancreas excised from PLs, or in faecal strands shed from spawning adult female shrimp and collected from spawning tanks. 50 2.2.4. 51 MBV is strictly enteric infecting mucosal epithelial cells of the hepatopancreas tubules and the anterior midgut (1, 6, 13, 21, 26, 32). 52 2.2.5. 53 54 55 Persistent infection occurs commonly in penaeid hosts of MBV. Wild adult P. monodon females that are heavily infected with MBV have been shown to excrete MBV-contaminated faeces when spawning, thereby contaminating the eggs and passing the virus to the next generation (21, 26). 56 2.2.6. 57 None known in natural infections. 58 2.2.7. 59 60 MBV occurs with wild hosts of the penaeid shrimp/prawns listed in 2.2.1. MBV infections have not been reported from non-penaeid host species. Susceptible host species Susceptible stages of the host Species or sub-population predilection (probability of detection) Target organs and infected tissue Persistent infection with lifelong carriers Vectors Known or suspected wild aquatic animal carriers 2.3. Disease pattern 61 62 2.3.1. 63 64 65 66 Transmission of MBV is horizontal by ingestion of infected tissue (cannibalism), faeces, occlusion bodies, or virus-contaminated detritus or water (21, 26). MBV has been experimentally transmitted in the laboratory by exposure of larval or early PL P. monodon by water-borne or per os challenge. MBV occlusion bodies were apparent by 2 days post-challenge in hepatopancreatic cells when PL-1 were challenged at 28°C in 33 parts per thousand (ppt) sea water (39–41). 67 2.3.2. 68 69 Prevalence is highly variable: from <1% in wild and cultured populations up to 100% in cultured populations in larval-rearing tanks and nursery ponds (1, 7, 9, 11, 12, 26, 39, 52). 70 2.3.3. 1 2 Transmission mechanisms Prevalence Geographical distribution There are two taxonomic systems for the penaeids currently in use (19, 42). In the most recent (42), which is not accepted by OIE, the penaeid subgenera were elevated to full genera. Hence, the Latin names listed as genera/subgenera reflect both options for the taxonomy of the penaeids (19, 42). Manual of Diagnostic Tests for Aquatic Animals 2009 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 71 72 73 74 75 MBV is enzootic in wild penaeids in the following regions bordering on the Indo-Pacific: East and South-East Asia, Indian subcontinent, Middle East, Australia, Indonesia, New Caledonia, East Africa, and Madagascar. Outside the normal geographical range of P. monodon, MBV has not been reported in wild penaeid shrimp. However, MBV has been reported from sites where introduced P. monodon has been cultured in the Mediterranean, West Africa, Tahiti and Hawaii, as well as several sites in North and South America and the Caribbean (5, 26). 76 2.3.4. 77 78 79 80 81 82 The larval stages (specifically protozoea and mysis) and early PL stages are the life stages where significant mortalities may occur and they are the most easily infected in laboratory challenge studies (11, 28, 40, 41). In enzootic regions culturing P. monodon, MBV prevalence and infection severity may be high in juveniles and adults (from 50% to nearly 100%), but without associated mortality or morbidity. MBV infections are apparently well tolerated by P. monodon unless they are severely stressed (7, 9, 11, 12, 26, 27, 28, 39). Nonetheless, heavy MBV infections in farmed P. monodon may suppress the growth rate, resulting in reduced survival and reduced overall culture performance (1, 2, 7, 16, 26, 28, 38, 40). 83 84 85 86 Economic and/or production impact of the disease: MBV has caused serious disease, sometimes with high mortality rates in hatcheries and significant production losses in farms in the Indo-Pacific. While not usually causing high mortality rates in infected juvenile or adult stages, MBV has been documented to cause reduced growth and lower harvest production in populations that are persistently infected with the virus (2, 26). 87 2.3.5. 88 None documented. 89 2.4. Control and prevention Mortality and morbidity Environmental factors 90 2.4.1. Vaccination 91 No effective vaccination methods for MBV have been developed. 92 2.4.2. 93 No scientifically confirmed reports. 94 2.4.3. 95 No scientifically confirmed reports. 96 2.4.4. 97 No MBV-resistant stocks of the susceptible species have been demonstrated. 98 2.4.5. 99 Not applicable to MBV. Chemotherapy Immunostimulation Resistance breeding Restocking with resistant species 100 2.4.6. Blocking agents 101 Not reported. 102 2.4.7. 103 See section 2.4.8. 104 2.4.8. 105 106 107 108 109 110 111 Hatchery: a number of husbandry practices have been applied to the prevention of MBV infections and disease. Prescreening of Disinfection of eggs and larvae General husbandry practices broodstock for MBV has been somewhat effective in detecting heavily infected carriers of the virus and thereby reducing the transmission of the disease from parent to offspring. With non-lethal testing methods, this is accomplished by simple light microscopic examination of faecal strands (or by PCR testing of faecal strands if PCR testing facilities are readily available). Alternatively, spent broodstock may be killed after spawning and simple light microscopic examination of a hepatopancreas squash can be run (or the excised hepatopancreas may be tested by PCR) to determine the spawner’s MBV infection status. As MBV is transmitted from adults to their offspring by faecal contamination of the spawned eggs, prevention of infection in hatcheries may be Manual of Diagnostic Tests for Aquatic Animals 2009 3 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 112 113 achieved by taking additional steps to eliminate faecal contamination of spawned eggs and larvae by thoroughly washing nauplii or eggs with formalin, iodophores, and clean sea water (10). 114 115 116 117 118 Nursery and grow-out ponds: MBV infections remain common in earthen-bottom ponds in regions of the Indo-Pacific where the virus 119 is enzootic (5, 7, 26). However, the incidence and prevalence of BP infections may be reduced, or totally eliminated, with lined nursery and grow-out ponds. This is an advantage of lined ponds because MBV occlusion bodies (which resist environmental degradation and contain infectious MBV virions) are removed with pond bottom sludge after harvest of an infected crop, allowing the previously contaminated pond to be cleaned, disinfected and dried before being filled and restocked with MBV-free postlarvae (if available). 3. Sampling 120 3.1. Selection of individual specimens 121 Suitable specimens for testing for infection by MBV include all life stages except eggs. 122 3.2. Preservation of samples for submission 123 124 For unstained wet-mounts of tissue squashes (excised hepatopancreas or faeces) or whole shrimp (larvae), live or freshly iced unfixed specimens are suitable. 125 For routine histology or molecular assays see Chapter 2.3 for guidance on preservation of samples for the intended test method. 126 3.3. Pooling of samples 127 128 129 Samples taken for molecular tests may be combined as pooled samples of no more than five specimens per pooled sample of faecal strands, juveniles, subadults and adults. However, for eggs, larvae and PL pooling of larger numbers (e.g. ~150 or more eggs or larvae or 50–150 PL, depending on their size/age) may be necessary to obtain sufficient sample material (extracted nucleic acid) to run a diagnostic assay. 130 3.4. Best organs or tissues 131 132 133 MBV infects the mucosal epithelial cells of the hepatopancreas tubules and midgut. Hence, the best organs or tissues to sample/test/examine contain these organs/tissues. Since MBV polyhedral occlusion bodies and free virus are shed into the faeces, fresh faecal strands may be collected and used when non-lethal testing of valuable broodstock is necessary. 134 3.5. Samples/tissues that are not suitable 135 136 137 MBV infects only the hepatopancreas and midgut mucosal epithelial cells, therefore, pleopods, haemolymph or other tissues that do not include hepatopancreas or midgut tissue are inappropriate samples for detection of infection by MBV virus. Fresh faecal strands when collected from juveniles, subadults, or adults may be used in some assays as a non-lethal sampling method for MBV testing. 138 4. Diagnostic methods 4.1. Field diagnostic methods 139 140 4.1.1. Clinical signs 141 142 143 Protozoea, mysis and early PL stages with severe MBV infections may present a whitish midgut (due to the presence of occlusion bodies and cell debris in the faecal material) (26). Juveniles and adults present no gross signs of diagnostic value, nor do larvae or PLs with less severe infections. 144 4.1.2. 145 None reported. Behavioural changes 4.2. Clinical methods 146 147 4.2.1. 148 See Section 4.1 149 4.2.2. 4 Gross pathology Direct microscopic examination Manual of Diagnostic Tests for Aquatic Animals 2009 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 150 151 152 153 154 155 Infection of the hepatopancreas by P. monodon-type baculovirus (MBV) is one of the most easy to diagnose diseases of the penaeid shrimps and prawns. The occlusion bodies formed by the virus are very conspicuous and easily demonstrated by direct light microscopy with fresh specimens or by routine histological methods with fixed specimens. Direct microscopic methods are most suitable for the PL stages, which are commonly moved in regional and international trade. Highly sensitive molecular methods for MBV are also available and provide the most sensitive methods for surveillance applications, especially for non-lethal testing of broodstock. 156 157 158 159 Wet-mounts of fresh tissue: diagnosis of MBV infections is made by the demonstration of single or multiple generally spherical occlusion bodies in wet mounts of squash preparations of hepatopancreas or midgut examined by phase-contrast or bright-field microscopy. In carefully prepared unstained preparations, MBV occlusion bodies are visible as single or multiple, slightly refractive, greenish intranuclear inclusions that range in diameter from less than 0.1 µm to nearly 20 µm. 160 161 162 Staining the tissue squash with 0.05% aqueous malachite green aids in demonstration of the occlusion bodies by staining them more intensely than other similar sized spherical objects, such as normal host cell nuclei, nucleoli, secretory granules, phagolysosomes, and lipid droplets (5, 25, 26, 32). 163 164 165 166 167 168 169 170 171 Wet mounts of faecal strands: this method may be used as a non-lethal method to screen for carriers of MBV. The method can be 172 173 Collected faeces may also be used as the sample for non-lethal testing for MBV by PCR. PCR will provide greater diagnostic sensitivity for low-grade infections than direct microscopic examination (5, 31). 174 4.2.3. 175 176 177 178 179 180 181 182 183 184 185 Histopathology may be used to provide a definitive diagnosis of MBV infection. Since 10% buffered formalin and other fixatives provide, at best, only fair fixation of the shrimp hepatopancreas (the principal target organ for MBV), the use of Davidson’s fixative (containing 33% ethyl alcohol [95%], 20% formalin [approximately 37% formaldehyde], 11.5% glacial acetic acid and 33.5% distilled or tap water) is highly recommended for all routine histological studies of shrimp (4, 26). To obtain the best results, dead shrimp should not be used. Only live, moribund, or compromised shrimp should be selected for fixation and histological examination. Selected shrimp are killed by injection of fixative directly into the hepatopancreas. The cuticle over the cephalothorax and abdomen just lateral to the dorsal midline is opened with fine-pointed surgical scissors to enhance fixative penetration (the abdomen may be removed and discarded), the whole shrimp (or cephalothorax less the abdomen) is immersed in fixative for from 24 to no more than 48 hours, and then transferred to 70% ethyl alcohol for storage. After transfer to 70% ethyl alcohol, fixed specimens may be transported (via post or courier to the diagnostic laboratory) by wrapping in cloth or a paper towel saturated with 70% ethyl alcohol and packed in leakproof plastic bags. 186 187 188 189 190 191 192 193 194 195 To begin histological processing, fixed shrimp are ‘cut-in’ (see Bell & Lightner [4] for a photographic guide to this procedure) to facilitate eventual sectioning of the hepatopancreas and midgut. After dehydration, the specimens are embedded in paraffin and sections of 4–6 µm thickness are cut. Routine histological stains such as Mayer Bennett’s or Harris’ haematoxylin and eosin (H&E) may be used for the demonstration of MBV diagnostic spherical occlusion bodies in hepatopancreatocytes, gut epithelial cells, or gut lumen. Typically, MBV-infected hepatopancreatic (or occasionally midgut) cells will present markedly hypertrophied nuclei with single or, more often, multiple eosinophilic occlusion bodies along with chromatin diminution and margination. Occlusion bodies may be stained bright red with H&E stains, and intensely, but variably, with Gram’s tissue stains. For example, Brown and Brenn’s histological Gram stain, although not specific for baculovirus occlusion bodies, tends to stain occlusions more intensely (either red or purple, depending on section thickness, time of decolourising, etc.) than the surrounding tissue, which may aid in demonstrating their presence in low-grade infections (5, 6, 23, 25, 26, 53). 196 4.2.4. 197 198 199 200 The autofluorescence method with phloxine stain is another method for detecting MBV occlusion bodies based on the fluorescence of phloxine-stained occlusion bodies. Aqueous 0.001% phloxine may be added to tissue squash preparations to make wet mounts of hepatopancreas or faeces for direct examination. Histological sections stained with routine H&E containing 0.005% phloxine are also suitable for this procedure. MBV occlusions in wet mounts of tissue squashes, in faeces, or in histological sections fluoresce bright applied to juvenile or older shrimp, and it is perhaps most useful as a non-lethal method for screening valuable broodstock. Faecal samples from shrimp to be tested may be obtained by placing the shrimp in an aquarium, spawning tank, or other suitable tank for a few hours until faecal strands are present on the tank bottom. The faecal strands are best collected using a clear plastic siphon hose (an air line fitted with a section of plastic pipette as a tip is ideal) and placed in a beaker, cup, or other suitable container. The faecal strands may be made into wet mounts and examined directly for occlusion bodies. MBV occlusion bodies are roughly spherical, refractive bodies that may occur singly or in clusters. In very fresh faecal strands, they may occur in clusters held together by the nuclear membrane. The addition of a drop of 0.05% aqueous malachite green to the wet-mount preparation aids in demonstrating the MBV occlusion bodies by staining them more intensely green than other round objects in the faeces (5, 26). Histology Autofluorescence Manual of Diagnostic Tests for Aquatic Animals 2009 5 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 201 202 203 yellow-green against a pale green background under epi-fluorescence (barrier filter of 0–515 nm and a 490 nm exciter filter). Other objects in the tissues and insect baculovirus occlusion bodies do not fluoresce with this method. Hence, the method can provide a rapid and specific diagnosis (5, 26, 47). 204 4.2.5 205 See Section 4.3. 206 4.2.6 207 208 Polyclonal antibodies produced in rabbits for detection of tetrahedral baculovirosis (BP) polyhedrin (24) cross react with MBV using indirect fluorescent antibody test (IFAT) methods (26), but none is available for routine diagnosis of MBV infections. 209 4.2.7 210 211 MBV infection can be confirmed by demonstration of the virus (or pathognomonic occlusion bodies with occluded virions) in sections, or demonstration of the virus in semi-purified virus preparations prepared from the hepatopancreas (13, 16, 21, 32, 33, 36). In-situ hybridisation Antibody-based methods Electron microscopy/cytopathology 4.3. Agent detection and identification methods 212 4.3.1. 213 Direct detection methods 214 4.3.1.1. Microscopic methods 215 4.3.1.1.1. Wet mounts 216 See Section 4.2.1 above 217 4.3.1.1.2. Histological sections 218 See Section 4.2.1 above 219 4.3.1.2. Agent isolation and identification 220 4.3.1.2.1. Cell culture/artificial media Not applicable. 221 4.3.1.2.2. Antibody-based antigen detection methods 222 See Section 4.2.6. 223 4.3.1.2.3. Molecular techniques 224 225 4.3.1.2.3.1. Molecular methods using DNA probes to MBV 226 227 228 229 230 231 Non-radioactive DIG-labelled gene probes to MBV have been developed (29, 35, 36, 43). DIG-labelled DNA probes for MBV are commercially available as ShrimProbe™ kits from DiagXotics (Lawrenceville, New Jersey, USA). The probes are labelled with a non-radioactive label, digoxigenin-11-dUTP (DIG). These probes only work well with the in-situ hybridisation method with histological sections because there are substances present in the hepatopancreas and faeces of shrimp that provide both false-positive and false-negative results with samples that are blotted directly and not extracted prior to probing. 232 4.3.1.2.3.2. Dot-blot hybridisation procedure for MBV 233 234 235 236 237 238 239 240 While specific DNA probes for MBV are available, their application to dot-blot hybridisation procedures is not recommended for most routine diagnostic applications. Pigments present in the hepatopancreas leave a coloured spot on the hybridisation membrane that can result in the masking of a positive test or in the false interpretation of a negative test. Likewise, pieces of chitin (which non-specifically bind DNA probes), pigments, and other materials present in the faecal sample may also result in false-positive or false-negative dot-blot hybridisation tests. Extraction of DNA from the hepatopancreas or faeces prior to blotting or the use of chemiluminescent or radioactively labelled probes may circumvent these problems and is recommended. Nonetheless, the adequacy of other test methods (i.e. direct wet mounts, histology, or PCR) has not indicated a need for the further refinement and application of the dot-blot method (26, 32). 241 4.3.1.2.3.3. In-situ hybridisation procedure 6 Manual of Diagnostic Tests for Aquatic Animals 2009 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 242 243 The in-situ hybridisation protocol given in detail for tetrahedral baculovirosis (BP) in Section 4.3.1.2.3.1 of Chapter 2.3.6 uses the same method except that a DIG-labelled probe for MBV is used. 244 4.3.1.2.3.4. Polymerase chain reaction for MBV 245 246 247 Several PCR methods have been developed for MBV and may be suitable for certain applications (8, 34, 48, 50, 51). However, more sensitive methods have been developed recently and have been demonstrated to detect MBV from several geographical regions (3, 46). 248 249 250 251 Substances in the hepatopancreas and faeces of shrimp have been found to inhibit the DNA polymerase used in the PCR assay. Therefore, DNA extraction is required before PCR can be successfully applied to the detection of this virus (3, 8, 20). DNA extraction kits are convenient and commercially available. Otherwise, refer to Section 4.3.1.2.3.2 of Chapter 2.3.6 Tetrahedral baculovirosis (BP) for a suitable DNA extraction procedure. 252 253 254 The following controls should be included in every PCR assay for MBV: a known negative tissue or negative faecal sample; a known positive tissue or faecal sample (this can be the DNA clone from which a specific set of primers was designed); and a ‘no-template’ control. 255 256 257 258 Nested PCR method for MBV (3): this nested PCR method is capable of detecting low concentrations of MBV (down to eight viral genome equivalents). Two external and two internal primers were designed using a DNA sequence derived from the plasmid p4Ec196, which was constructed from a 7.4 kb EcoRI fragment of an Australian isolate of MBV. The primer sequences are: 259 260 Primer Sequence Temperature MBV1.4F 5’-CGA- TTC-CAT-ATC-GGC-CGA-ATA-3’ 62°C (68.9°C) MBV1.4r 5’-TTG-GCA-TGC-ACT-CCC-TGA-GAT-3’ 64°C (70.8°C) MBV1.4NF 5’-TCC-AAT-CGC-GTC-TGC-GAT-ACT-3’ 64°C (70.8°C) MBV1.4NR 5’-CGC-TAA-TGG-GGC-ACA-AGT-CTC-3’ 66°C (72.8°C) The melting temperatures of the primers are according to the formula 2(A+T) + 4(G+C), or according to the percentage GC method (values in parentheses). 261 DNA extraction 262 263 264 i) PCR inhibitors were noted by Belcher & Young (3) to be present in DNA samples prepared from whole MBV-infected PL P. monodon when using the extraction method recommended by Wang et al. (54) for BP, which incorporates proteinase K. However, when hot phenol was used to extract the DNA, this inhibitory effect was removed. 265 266 ii) With the hot phenol method, the sample to be tested (PLs, shrimp hepatopancreas, faeces) is freeze-dried and ground to a powder in liquid nitrogen with a motor and pestle. 267 268 269 iii) Approximately 300 mg of the resulting material is added immediately to 400 µl of preheated (65°C) lysis buffer (100 mM Tris/HCl, 100 mM ethylene diamine tetra-acetic acid [EDTA], 1% sodium dodecyl sulphate, pH 8.0) and incubated at 65°C for 5–10 minutes. 270 271 272 iv) The resulting suspension is coarsely homogenised by spot centrifugation and homogenisation with a microfuge tube pestle. Tris/HCl-buffered phenol, pH 8.0 (600 µl) is added and the mixture is incubated for 2 hours at 65°C with occasional inversion. 273 274 275 276 v) Following centrifugation at 12,000 g for 10 minutes at room temperature, the aqueous layer is transferred to a fresh microfuge tube and extracted twice with an equal volume of phenol/chloroform (1/1). Then, a total of 50 µl of the aqueous layer is transferred to a fresh microfuge tube containing 150 µl dilution buffer and extracted once more with an equal volume of phenol/chloroform (1/1) followed by a straight chloroform extraction. 277 278 vi) Ammonium acetate is added to the aqueous layer to a final concentration of 2.5 M, mixed briefly, and two volumes of –20°C ethanol are added with 1 µl of 20 mg/litre glycogen to precipitate the DNA. 279 vii) DNA is precipitated by incubation at –20°C overnight or by incubation at –70°C for 1 hour. 280 281 282 viii) DNA is pelleted at 12,000 g for 15 minutes at 4°C. The resulting DNA pellet is rinsed twice, first with 500 µl 80% cold ethanol and centrifuged at 12,000 g for 10 minutes at 4°C, followed by an identical rinse and centrifugation at room temperature. 283 284 285 ix) 286 Nested PCR steps of Belcher & Young (3): The final DNA pellet is dried in vacuo, resuspended in 100 µl dilution buffer (10 mM Tris/HCl, pH 8.0, 0.1 mM EDTA, pH 8.0) at room temperature overnight or at 37°C for 2 hours. Following spectrophotometric analysis, and prior to PCR, the DNA is diluted to 50 ng/µl in dilution buffer. Manual of Diagnostic Tests for Aquatic Animals 2009 7 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 287 288 i) Prior to PCR, the extracted total DNA is denatured in boiling water for 3 minutes followed by quick chilling in icewater. 289 ii) A total of 100 ng of extracted DNA is used as a template. 290 291 iii) Each reaction tube contains 50 mM KCl, 10 mM Tris/HCl, pH 9, 0.1% Triton X-100, 0.2 mM of each dNTP, 1.5 mM MgCl2, 0.25 µM of each MBV1.4F and MBV1.4R, 2.5 U of Taq, and made up to a final volume of 50 µl. 292 iv) The reaction mixes are overlaid with mineral oil (as necessary). 293 294 v) The conditions for the first round of amplification are: one cycle of 96°C for 5 minutes; 40 cycles of 94°C for 30 seconds, 65°C for 30 seconds, 72°C for 60 seconds; and one cycle of 72°C for 7 minutes. 295 296 vi) The second step of the nested PCR is accomplished with 0.5 µl of the primary PCR reaction used as template with the internal primers. 297 298 299 vii) The second round of amplification reaction contains 50 mM KCl, 10 mM Tris/HCl, pH 9.0, 0.1% Triton X-100, 1.5 mM MgCl2, 0.2 mM of each dNTP, 0.25 µM of each of the primers MBV1.4NF and MBV1.4NR, and 2.5 U of Taq, and made up to a final volume of 50 µl. 300 viii) The reaction mixes are overlaid with mineral oil (as necessary). 301 302 ix) The conditions for the second round of amplification are: one cycle of 96°C for 5 minutes; 35 cycles of 94°C for 30 seconds, 60°C for 30 seconds, 72°C for 60 seconds; and one cycle of 72°C for 7 minutes. 303 304 305 306 x) Demonstration of the PCR products (533 bp first step and 361 bp second step) is accomplished by adding 1 µl of gelloading buffer (0.25% [w/v] bromophenol blue, 15% [w/v] Ficoll-type 400, 100 mM EDTA, pH 8.0) to 10 µl of each reaction mixture and electrophoresis through a 0.8% agarose gel in TAE buffer (40 mM Tris-acetate, 1 mM EDTA, pH 8.0) containing 0.5 g/litre ethidium bromide. 307 308 309 An alternative single-step PCR method is used by the OIE Reference Laboratory at the University of Arizona because it is less prone to contamination (46). This method uses the sample type and extraction methods as described above in a previous section. 310 311 Primers: one forward and reverse primer pair (261F/261R) selected from clone GC7 and deposited in GenBank with 312 The sequences for these primers are: 313 261F 5’-AAT-CCT-AGG-CGA-TCT-TAC-CA-3’ 314 261R 5’-CGT-TCG-TTG-ATG-AAC-ATC-TC-3’ 315 DNA templates: 316 i) Extracted from hepatopancreas (frozen or ethanol fixed); 317 ii) Extracted from whole PLs (frozen or ethanol fixed); 318 iii) Extracted from faeces (frozen or ethanol fixed). 319 PCR reaction mixture: accession number AY819785 produces a 261 bp amplicon (46). Reagent (concentration) Distilled H2O 25 µl PCR beads* 23.5 µl Primer 261F (0.3 µM) Primer 261R (0.3 µM) DNA template (50–450 ng of DNA) 0.5 µl 0.5 µl 0.5 µl *PuReTaq™ Ready-To-Go PCR beads™, Amersham Biosciences, Buckinghamshire, UK. 320 PCR cycling parameters: 321 Primers 261F/261R Mix/Beads Beads* Time 5 minutes 30 seconds, 30 seconds, 30 seconds 7 minutes 8 Temp. °C 95 94 60 72 72 No. cycles 1 35 1 Manual of Diagnostic Tests for Aquatic Animals 2009 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 4.3.1.2.4. Agent purification 322 While methods for purification of MBV polyhedra and virions are published (4, 41), none is in routine use as a diagnostic method. 323 324 4.3.2. Serological methods 325 326 Not applicable because shrimp are invertebrate animals which do not produce specific antibodies that could be used to demonstrate infection by or prior exposure to MBV. 327 5. Rating of tests against purpose of use 328 329 330 331 332 333 The methods currently available for targeted surveillance and diagnosis of MBV are listed in Table 5.1. The designations used in the Table indicate: a = the method is the recommended method for reasons of availability, utility, and diagnostic specificity and sensitivity; b = the method is a standard method with good diagnostic sensitivity and specificity; c = the method has application in some situations, but cost, accuracy, or other factors severely limits its application; and d = the method is presently not recommended for this purpose. These are somewhat subjective as suitability involves issues of reliability, sensitivity, specificity and utility. Although not all of the tests listed as category a or b have undergone formal standardisation and validation, their routine nature and the fact that they have been used widely without dubious results, makes them acceptable. 334 Table 5.1. Methods for targeted surveillance and diagnosis Method Targeted surveillance Presumptive diagnosis Confirmatory diagnosis Larvae PLs Juveniles Adults Gross signs c d d d d d Bioassay d d d d c c Direct LM b b c c a a Histopathology b b c c a a Transmission EM d d d d d a Antibody-based assays d d d c d d DNA Probes in situ c c c c a a PCR a a a a a a PLs = postlarvae; LM = light microscopy; EM = electron microscopy; PCR = polymerase chain reaction. 335 Tests recommended for targeted surveillance to declare freedom from spherical baculovirosis (infection with Penaeus monodon-type baculovirus) 336 337 6. 338 339 As indicated in Table 5.1, PCR (see appropriate section of this chapter) is the recommended method for targeted surveillance for reasons of availability, utility, and diagnostic specificity and sensitivity. 340 341 342 Where PCR testing is not available, direct microscopy (of wet-mounts) or histopathology, as illustrated in Table 5.1 and detailed in Section 4.2.2 and 4.2.3, may provide suitable methods for targeted surveillance, provided the appropriate samples from the appropriate life stages of the host shrimp are used. 343 7. Corroborative diagnostic criteria 344 7.1. Definition of suspect case 345 346 347 For larvae (especially protozoea, mysis and early PL stages) of the susceptible species, a suspect case is represented by mortality of larvae showing white midguts. For juveniles, it is represented by poor growth or poor culture performance in populations with a prior history of MBV infection or in regions where MBV is prevalent. Manual of Diagnostic Tests for Aquatic Animals 2009 9 Chapter 2.3.4. – Spherical baculovirosis (Penaeus monodon-type baculovirus) 348 7.2. Definition of confirmed case 349 350 Any combination of a molecular (PCR or ISH) test and a morphological (microscopy or histology) test using at least two of the following four methods (with positive results): 351 352 • Microscopical demonstration of spherical occlusion bodies in wet mounts of whole larvae or excised hepatopancreata. 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Org., 25, 123–131. 469 470 * * * 471 472 NB: There is an OIE Reference Laboratory for spherical baculovirosis (Penaeus monodon-type baculovirus) (see Table at the end of this Aquatic Manual or consult the OIE Web site for the most up-to-date list: www.oie.int) Manual of Diagnostic Tests for Aquatic Animals 2009 13
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