BIOIMAGING APPLICATION NOTE BD Biosciences Fluorescent Protein Organelle Biomarkers are Beneficial in LiveCell and Fixed-Cell–Based Imaging Applications INTRODUCTION We have expanded the BD™ Bioimaging Certified reagents portfolio to include eight BD Pharmingen™ FP organelle vectors. Fluorescent protein (FP) tags, which are expressed as fusion proteins to a gene or domain of interest, have been used in numerous cell applications such as monitoring protein trafficking, detecting gene activation, tracking cellular differentiation, and as subcellular organelle and cytoskeletal component biomarkers. These markers can be used alone or multiplexed with other probes for high-content applications. High-content imaging is a technology that can provide considerable insight into the behavior of cells; and therefore, is becoming an increasingly common tool in drug screening, translational biology, and other biological research laboratories. Both live-cell and fixed-cell (endpoint) imaging are used in high-content analysis. Live-cell assays can take advantage of time-lapse fluorescent microscopy to provide detailed phenotypic and quantitative information. However, live-cell assays can be technically challenging to develop and implement. Endpoint assays, which provide a single snapshot, are typically more user-friendly because they offer convenient stopping points, and the assays can be batch processed or automated to optimize throughput. BD Biosciences POB 13 Erembodegem-Dorp 86, B-9320 Erembodegem, Belgium Scientific Support: [email protected] For more information visit bdbiosciences.com/bioimaging Assays for high-content imaging or other quantitative imaging applications typically go through a development phase prior to implementation. During assay development, it is often desirable to perform assays in a live-cell environment to optimize time points for the experimental outputs, and then transition the assay into screening mode as an endpoint assay. In this scenario, it is preferable to use the same fluorescent probes during assay development (live cell) and screening (endpoint). However, due to the physical, chemical, and biochemical properties of some fluorescent probes this is not always possible. FPs, however, can be used in both live-cell and endpoint applications. We tested the eight BD Pharmingen FP organelle vectors in both live and fixed mammalian cell imaging applications and verified their functional location using colocalization studies. In addition, a stable cell line expressing the Red FP Mitochondrion vector was used to monitor apoptosis in a live-cell kinetic experiment. This cell line was also multiplexed with a dye and an antibody in a high-content endpoint apoptosis assay. Bioimaging Application Note – FP Organelle Vectors Introduction (continued) The availability of such versatile tools extends the possibilities for developing fluorescent-based assays that monitor not only protein location and trafficking within cellular structures but also the dynamics of cellular organelles. The Red or Green FP organelle markers described here can be transiently or stably transfected alone and in combination to obtain single-color or multicolor assays. Both fluorescent proteins are easily detected in living and fixed cells using a BD Pathway™ high-content cell analyzer or other fluorescent cell analysis platform. METHODS Cell culture Human cervical cancer (HeLa) cells (ATCC, CCL-2) were grown in 37°C, 5% CO2 humidified incubators and maintained in Minimum Essential Medium Eagle supplemented with 10% fetal bovine serum (FBS), 2 mM L-glutamine, 1 mM sodium pyruvate, 100 Iu/mL penicillin, 100 µg/mL streptomycin, (Mediatech, 10-010-CV, 35-010-CV, 25-005-CI, 25-000-CI, and 30-002-CI, respectively). Transfection and isolation of stably transfected cell populations HeLa cells (3x105 cells in 2 mL of medium) were plated into wells of a 6 well plate (Cat. No. 353046). After 24 h, they were transfected with 1 μg of FP organelle plasmid DNA using 3 µL of FuGENE® 6 Transfection Reagent (Roche Applied Science, 11814443001) according to manufacturer’s recommendations. After 48 h, transfected cells were selected using 0.5 mg/mL G418 sulfate (Mediatech, 30-234-CR) and kept in selection medium for two weeks. Then, a population of the 10% most highly expressing cells (based on fluorescence intensity) was isolated by cell sorting using a BD FACSAria™ cell sorter (Cat. No. 333888). Transient cotransfection on glass cover slips HeLa cells (3x105 cells in 2 mL of medium) were plated on glass cover slips (18 mm square) in wells of a 6 well plate. After 24 h, cells were transfected with 0.5 μg of each of two FP organelle plasmid DNA using 3 µL of FuGENE 6 Transfection Reagent. After 48 h, cells were fixed with pre-warmed (37°C) 3.7% formaldehyde (Sigma-Aldrich, 252549) for 10 min, washed three times with phosphate buffered saline (PBS), and mounted on slides using Vectashield mounting medium containing DAPI (Vector Laboratories, H-1200). Transient transfection in 96 well bioimaging plates HeLa cells (1x104 cells/well in 100 µL of medium) were seeded in 96 well bioimaging plates (Cat. No. 353219). After 24 h, the medium was removed and replaced with a transfection mixture that contained 50 ng of FP organelle plasmid DNA and 0.15 µL of FuGENE 6 Transfection Reagent in a total of 100 µL medium/well. After 48 h, cells were imaged or processed for verification of subcellular localization of the FP organelle marker. Verification of subcellular localization Volumes for all procedures except for antibody labeling were 100 µL/well. Antibody labeling was performed using 50 µL/ well. Antibodies were diluted in blocking buffer. Hoechst 33342 (Invitrogen, H3570) was used at 2 µg/mL. bdbiosciences.com Nuclei – Culture medium from live-cell cultures was replaced with Hanks Balanced Salt Solution (HBSS) containing Hoechst, and the cells were imaged. Mitochondrion – Culture medium was replaced with fresh medium containing 200 nM of MitoTracker® Deep Red 633 (Invitrogen, M22426). Cells were incubated for 45 min, washed twice with HBSS, then HBSS containing Hoechst was added, and the cells were imaged. Endoplasmic Reticulum (ER) – Cells were fixed as above, and permeabilized using 0.1% Triton™ X-100 (Sigma, T-9284) diluted in PBS, for 5 min, washed three times, blocked for 30 min in 3% FBS in PBS, and washed once. Cells were labeled with 0.5 µg/well anti-ERp61 antibody (Cat. No. 612585) for 1 h at room temperature and washed three times. Cells were incubated in 5 µg/mL of Alexa Fluor® 647 labeled goat antimouse IgG (Invitrogen, A21236) for 1 h in the dark. Cells were washed three times, PBS containing Hoechst was added, and the cells were imaged. Actin – Cells were fixed as above, and permeabilized for 5 min in 90% methanol (-20°C). Cells were washed and blocked as above. Cells were labeled with a 1:10 dilution of BD™ Bioimaging Certified Alexa Fluor® 647 Mouse anti-Actin (Cat. No. 558624) for 1 h in the dark. Cells were washed three times, and PBS containing Hoechst was added, and the cells were imaged. Golgi Apparatus – Cells were fixed, Triton permeabilized, and blocked as above. Cells were labeled with a 1:10 dilution of Bioimaging Certified Alexa Fluor® 647 Mouse anti-GM130 (Cat. No. 558712) for 1 h in the dark. Cells were washed twice, PBS containing Hoechst was added, and the cells were imaged. Peroxisomes – Cells were fixed, Triton permeabilized, and blocked as above. Cells were labeled with 0.5 µg/well antiperoxisomal membrane protein 70 antibody (Invitrogen, S34201) for 1 h at room temperature and washed three times. Cells were incubated in 5 µg/mL of Alexa Fluor® 647 labeled goat anti-rabbit IgG (Invitrogen, A21245) for 1 h in the dark. Cells were washed three times, PBS containing Hoechst was added, and the cells were imaged. Apoptosis assays Live-cell assay – HeLa cells stably transfected with the Red FP-Mitochondrion vector were seeded (1x104 cells/well) into 96 well imaging plates. Sixteen to 24 h later, plates were placed into the pre-equilibrated environmental chamber of a BD Pathway 855 cell analyzer. Images were obtained prior to addition of 1 µM (final concentration) staurosporine to the wells by the BD Pathway 855 on-board fluidics, and every 45 min thereafter for 225 min. Fixed-cell assay – HeLa cells stably transfected with the Red FP-Mitochondrion vector were seeded (1x104 cells/well) into 96 well imaging plates. Sixteen to 24 h later, staurosporine (1 µM final concentration), or vehicle control was added to duplicate wells at hourly increments over 4 h. After treatment, cells were fixed and washed, as above, and permeabilized with BD Perm/Wash™ buffer (Cat. No. 554723) for 30 min at room temperature. The cells were incubated with a 1:10 dilution of Bioimaging Certified Alexa Fluor® 647 Mouse anti-cleaved PARP antibody (Cat. No. 558710) in BD Perm/Wash buffer at 4°C overnight. Cells were washed three times, PBS containing Hoechst was added, and the cells were imaged. Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale. Bioimaging Application Note – FP Organelle Vectors Imaging and analysis Cells were imaged on a BD Pathway™ 855 cell analyzer (Cat. No. 341036) using the objectives stated in the figure legends and filter sets appropriate for the excitation and emission spectra of the samples. Image and data analysis were performed using BD Pathway software analysis tools. Cell populations were analyzed for nuclear and cytoplasmic fluorescence intensity and size. The Green FP has an excitation maxima of 475 nm and an emission maxima of 505 nm; the Red FP has an excitation maxima of 558 nm and an emission maxima of 585 nm (Table 2).16, 17 The excitation and emission wavelengths of these FPs make them suitable for detection using a wide range of cell analysis instruments including the BD Pathway and other highcontent imaging platforms, standard fluorescent microscopes, flow cytometers, cell sorters, and fluorescent plate readers. Localization of FP vectors RESULTS AND DISCUSSION Organelle vectors We describe a panel of eight vectors expressing fusion proteins composed of Green or Red FPs and proteins that target various cellular structures or organelles (Table 1). The FP fusions were expressed under the control of the immediate early promoter of cytomegalovirus, an efficient promoter in many cells.12 To increase the translation efficiency in mammalian cells, a Kozak consensus translation initiation site13 was introduced to the 5´end of the FPs open reading frame, and the FP sequence was optimized with human codons.14 The FP fusion sequence was followed by downstream SV40 polyadenylation signals.15 To confirm the FPs were targeted to the correct subcellular location or organelle, HeLa cells were transiently transfected with the various FP vectors and then co-labeled with a dye or antibody known to target the same subcellular location or organelle (Table 3). Location and organelle specific confirmatory probes were selected such that the excitation and emission spectra were non-overlapping with those of the FP vectors. Images in the respective channels were captured and color channel merged (pseudocolored) to verify the colocalization of the FP probe with the confirming probe (Figure 1). In all cases except the nuclear markers, colocalization of staining was represented by a yellow to orange color (depending on the level of expression of the Table 1. Bioimaging Certified FP organelle marker vectors. Vector Name and Location Fusion Tag Ref. Cat. No. Green FP – Actin C-terminal whole actin fusion 1,2 558721 Green FP – Golgi N-terminal human ß 1,4-galactosyltransferase (aa 1-81) 3,4 558719 Green FP – Mitochondrion N-terminal mitochondrial targeting sequence of cytochrome c oxidase subunit VIII 5 558718 Green FP – Nucleus C-terminal SV40 Large T antigen nuclear localization signal (in triplicate) 6,7 558720 Red FP – Endoplasmic Reticulum N-terminal calreticulin ER targeting sequence + C-terminal KDEL ER retention signal 8,9 558725 Red FP – Mitochondrion N terminal mitochondrial targeting sequence of cytochrome c oxidase subunit VIII 5 558722 Red FP – Nucleus C-terminal SV40 Large T antigen nuclear localization signal (in triplicate) 6,7 558723 Red FP – Peroxisome C-terminal peroxisomal targeting signal 1 tripeptide (SKL) 10, 11 558724 Table 2. Green and Red FP excitation and emission maxima. Fluorescent Protein Excitation Maxima Emission Maxima Green 475 nm 505 nm Red 558 nm 585 nm Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale.. bdbiosciences.com Bioimaging Application Note – FP Organelle Vectors Table 3. Colocalization of confirmatory probes. FP Vector Confirmatory Probe Mechanism of Confirmatory Probe Ref. Figure 1 Panel and Color of Colocalized Probes Red - Nucleus Hoechst 33432 dye DNA binding dye 18 Panel A, Magenta Green - Nucleus Hoechst 33432 dye DNA binding dye 18 Panel B, Cyan Red - Mitochondrion MitoTracker dye Accumulates in mitochondria 19 Panel C, Yellow - orange Green - Mitochondrion MitoTracker dye Accumulates in mitochondria 19 Panel D, Yellow - orange Red - Endoplasmic Reticulum Anti-ERp61 antibody Recognizes an ER chaperone protein 20 Panel E, Yellow - orange Green - Actin Anti-actin antibody Recognizes actin filaments 21 Panel F, Yellow - orange Red - Peroxisome Anti-PMP70 antibody Recognizes a peroxisomal membrane protein 22 Panel G, Yellow - orange Green - Golgi Anti-GM130 antibody Recognizes a 130-kDa golgi matrix protein 23 Panel H, Yellow - orange Figure 1. Verification of FP organelle marker location in transiently transfected cells. Cell images were color channel merged. The red FPs were pseudocolored red, the confirmatory stain was pseudocolored green (Panels C, E, and G), or blue (Panel A). The green FPs were pseudocolored green, the confirmatory stain was pseudocolored red (Panels D, F, and H), or blue (Panel B). Hoechst dye was pseudocolored blue. Panel A, Red FP-Nucleus and Hoechst. Panel B, Green FP-Nucleus and Hoechst. Panel C, Red FP-Mitochondrion and MitoTracker Deep Red. Panel D, Green FP-Mitochondrion and MitoTracker Deep Red. Panel E, Red FP-Endoplasmic Reticulum and antiERp61. Panel F, Green FP-Actin and anti-actin. Panel G, Red FP-Peroxisome and anti-PMP70. Panel H, Green FP-Golgi and anti-GM130. Cells were imaged using a 40x objective (0.9 NA) in confocal mode. bdbiosciences.com Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale. Bioimaging Application Note – FP Organelle Vectors FP in each cell) in the merged images. For the nuclear markers, colocalization was represented as magenta for the Red FP and cyan for the Green FP. In addition to general nuclear localization, the FP nuclear markers showed distinct localization to nucleoli. Cells that were not transiently transfected with the FP vectors showed staining only with the non-FP confirmatory probe. Live-Cell and Fixed-Cell Imaging To show the utility of the FP organelle vectors in live-cell imaging, cells were transiently transfected with each marker and were imaged in the environmental chamber of the BD Pathway™ 855 cell analyzer. Figure 2 shows live-cell confocal images of HeLa cells expressing the four Green FP organelle markers. Cells stably expressing the Green FP-Actin exhibited specific signal in actin filaments (Figure 2, Panel A). Similarly, cells stably expressing the Green FP-Nucleus were imaged and the signal localized only in the nucleus (Figure 2, Panel B). Cells expressing the Green FP-Golgi fusion had signal localized to small cytoplasmic golgi structures around the nucleus (Figure 2, Panel C), and cells expressing the Green Figure 2. Live-cell imaging of transiently transfected Green FP tagged organelle markers. Live-cell images were color channel merged. The green FP signal was pseudocolored green and Hoechst staining was pseudocolored blue. Panel A, Green FP-Actin; Panel B, Green FP-Nucleus; Panel C, Green FP-Golgi; Panel D, Green FPMitochondrion. Cells were imaged using a 40x objective (0.9 NA) in confocal mode. FP-Mitochondrion had signal in the mitochondria (Figure 2, Panel D). Non-transfected cells showed only Hoechst staining and no FP-specific signal. Red FP vectors are also suitable for live-cell imaging, as shown in Figure 3. HeLa cells stably expressing the Red FP-Nucleus exhibited fluorescence in the nucleus (Figure 3, Panel A). Cells expressing the Red FP-Mitochondrion fusion had signal in the mitochondria (Figure 3, Panel B). Stably transfected cells with the Red FP-Peroxisome construct had a punctate fluorescent pattern corresponding to the peroxisome organelle distribution throughout the cytoplasm of the cells (Figure 3, Panel C). Finally, stable expression of the Red FP-Endoplasmic Reticulum fusion in HeLa cells allowed visualization of the ER network located in the cytoplasm of the cells (Figure 3, Panel D). Again, non-transfected cells exhibited Hoechst staining but not FP-specific signal. Cotransfection of more than one FP vector is also possible. This may be especially useful for studying protein trafficking between subcellular compartments. HeLa cells were transiently transfected with 2 FP vectors and imaged. Representative Figure 3. Live-cell imaging of transiently transfected Red FP tagged organelle markers. Live-cell images were color channel merged. The red FP signal was pseudocolored red and Hoechst staining was pseudocolored blue. Panel A, Red FP-Nucleus; Panel B, Red FP-Mitochondrion; Panel C, Red FP-Peroxisome; Panel D, Red FPEndoplasmic Reticulum. Cells were imaged using a 40x objective (0.9 NA) in confocal mode. Figure 4. Imaging of dual transiently transfected FP tagged organelle markers in fixed cells. Fixed-cell images were color channel merged. The green FP signal was pseudocolored green, the red FP signal was pseudocolored red, and DAPI staining was pseudocolored blue. Panel A, Green FP-Golgi and Red FP-Nucleus; Panel B, Green FP-Nucleus and Red FP-Mitochondrion; Panel C, green FP-Nucleus and Red FP-Peroxisome. Cells were imaged using a 40x objective (0.9 NA) in confocal mode. Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale. bdbiosciences.com Bioimaging Application Note – FP Organelle Vectors images from cotransfection experiments are shown in Figure 4, Panel A shows the Green FP-Golgi and Red FP-Nucleus markers where the green signal was localized in cytoplasmic golgi apparatus and the red signal was localized in the nucleus. The nucleus and mitochondria of cells expressing the Green FP-Nucleus and the Red FP-Mitochondrion were labeled by the FPs as shown in Panel B. Panel C shows cells cotransfected with Green FP-Nucleus and Red FP-Peroxisome vectors. Untransfected cells showed only DAPI staining. Performing FP-based assays using fixed cells provides the opportunity to multiplex the FP signal with antibody labeling. This can provide multiple (confirmatory) readouts on a cell process being investigated or enable simultaneous collection of information on multiple cellular processes. When using FP vectors in fixed-cell applications, we noted some loss in fluorescent intensity post fixation. However, camera exposure times for fixed cells transfected with FP vectors were in the same range as other types of probes (1 to 500 ms exposures for non-confocal images). Figure 5 shows a representative example of the same field of view before and after formaldehyde fixation. Exposure time for the live-cell image was 1 ms and 5 ms for the fixed image. There was no change in cellular localization for any of the FP probes after fixation (or permeabilization, data not shown). Some modest organelle structural changes were noted (Figure 5, Panel B). These were likely the result of the fixation process on delicate cell structures Figure 5. Fixation of an FP organelle probe. HeLa cells stably expressing the Red FP-Mitochondrion were imaged prior to formaldehyde fixation (Panel A), and then the same field of view was imaged post fixation (Panel B). Images were acquired with exposure times of 1 ms (Panel A) and 5 ms (Panel B) with a 20x objective (0.75 NA) . such as mitochondria. Overall, the data shows that cells expressing FP vectors can be successfully imaged alive or after treatment with fixative. Assay development using FP vectors We investigated the utility of HeLa cells stably expressing the Red FP-Mitochondrion vector for detecting staurosporineinduced apoptosis in live and fixed cells. Staurosporine is a well know inducer of apoptosis in HeLa cells and has been reported to induce changes in the mitochondrial network morphology.24 For the live-cell assay, baseline images were obtained prior to adding staurosporine, and then wells were imaged every 45 min for 225 min after compound addition. Visual inspection of the kinetic series showed dramatic cellular morphological changes over time and distinct condensation of the mitochondrial structures and the cytoplasm of the cells (Figure 6, Left). Quantitative analysis of the average total mitochondrial area (μm2) in the kinetic images (Figure 6, Right) was performed by segmenting individual cells based on the fluorescence in the mitochondria, and the analysis showed the time-dependent loss of cytoplasmic area. Next, we explored the use of HeLa cells stably transfected with the Red FP-Mitochondrion vector in a multiplexed endpoint assay. Once again, 1 µM staurosporine was used to induce apoptosis over time. In this assay, in addition to the quantitative data obtained from the FP mitochondrion tag, measurements of a second apoptosis marker, cleaved poly(ADP-ribose) polymerase (PARP), was multiplexed along with nuclear size measurements based on Hoechst staining. The PARP protein is involved in DNA repair and is cleaved by proteins that are upstream in the apoptosis cascade, including caspase-3.25 Cleaved PARP was detected using a BD™ Bioimaging Certified directly conjugated anti-cleaved PARP antibody. Figure 7, Panels A – I show representative well images from 0, 2, and 4 h time points in the three channels (blue, green, red) imaged to detect Hoechst staining of the nuclei, cleaved PARP labeling, and Red FP-Mitochondrion labeling, respectively. The red channel images show the same distinct cytoplasmic morphology condensation over time (Panels D – F) as was seen in the live-cell assay. Quantitation of the average cytoplasmic size (in pixels) is shown in Panel J (for details, see Figure 8). As with the live-cell data, the most dramatic change in Figure 6. Live-cell kinetics of apoptosis. Left, representative cropped images of the same field of view of HeLa cell expressing the Red FPMitochondrion marker taken prior to addition of 1 µM (final concentration) staurosporine (time 0) and for five subsequent 45 min time points. Cells were imaged using a 20x objective (0.75 NA). Right, analysis of the average total mitochondrial area ± SEM, N=5. bdbiosciences.com Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale. Bioimaging Application Note – FP Organelle Vectors Figure 7. A multiplexed apoptosis endpoint assay. Panels A – I, HeLa cells stably expressing the Red FPMitochondrion marker were stained with Hoechst and for cleaved PARP. Representative images from wells treated with vehicle control or 1 μM staurosporine for 2 or 4 hours are shown. Cleaved PARP staining is pseudocolored green (Panels A – C), the Red FP-Mitochondrion signal is pseudocolored red (Panels D – E), and Hoechst staining is pseudocolored blue (Panels G – I). Montaged (2x2) images were acquired using a 20x objective (0.75 NA). Panels J – M show the quantitative analysis of the time course data. Bar graphs show the mean ± SD, N=2. Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale. bdbiosciences.com Bioimaging Application Note – FP Organelle Vectors Figure 8. Cell segmentation parameters in a multiplexed endpoint assay. HeLa cells stably expressing the Red FP-Mitochondrion were stained with Hoechst and for cleaved PARP after treatment with vehicle control (Panels A – C) or 1 µM staurosporine for 4 h (Panels D – F). One cropped field of view (20x) is represented in Panels A – C and another in Panels D – F. Segmentation ROIs are shown as randomly colored cytoplasmic or nuclear boundaries with their associated ROI number. In Panels A and D, cytoplasmic size was measured as a 50-pixel ring dilated out from the nuclear mask (Panels B and E) but within the outer boundary of the cell’s cytoplasmic boundary, which was defined by the FP signal (dual channel two outputs segmentation). Cells not expressing the FP were excluded from all calculations based on a user-defined minimum intensity threshold and do not display ROIs. In Panel B and E, nuclear size was calculated using a nuclear mask identified by the Hoechst stain. Cleaved PARP signal was measured in the nucleus; and thus, the same segmentation mask that was used for identification of the nucleus was used for cleaved PARP based measurements (Panels C and F). In the control well image, no cells were cleaved PARP positive. In the treated well image, most cells showed some level of cleaved PARP signal but some cells (ROIs 105 and 109) were cleaved PARP negative. Cells that were cleaved PARP positive but not identified with ROIs were nontransfected cells that were excluded from the analysis. mitochondrial morphology occurs within the first hour of staurosporine treatment. Similarly, nuclear condensation, a hallmark of apoptosis, can be detected visually (Panels G – I) and quantitated (Panel K). These two effects show a similar trend and time response. Cells positive for cleaved PARP were virtually undetectable in control cells (Figure 7, Panel A), but become more numerous and brighter in intensity over time (Panels B and C). The timedependent increase in the number of cleaved PARP positive cells is shown in Panel L (% of cells within the wells that were positive). Quantitation of the increase in average intensity of the cleaved PARP labeling in positive cells over time is shown in Panel M. Apoptosis is a cascade of cellular events, some of which may be detected earlier than others. Data analysis showed that significant changes in cytoplasmic (mitochondrial) and nuclear morphology (38% and 27% loss in size, respectively) occurred within 1 h of staurosporine treatment. The percentage of cells positive for cleaved PARP was a slower response with only a 7.5% increase over controls at 1 h and a 50% increase by 3 h. Detection limits of the probes measured may also influence how thoroughly cellular responses are measured. These experiments demonstrate that the Red FP-Mitochondrion vector is well suited for either live-cell or multiplexed endpoint analysis of cellular apoptotic events. The results also highlight that analysis of multiparametric assay data can yield a more thorough understanding of the underlying biological response. bdbiosciences.com SUMMARY The Green FP and Red FP organelle markers are well suited for use in high-content and other imaging applications. The expression and correct localization of the markers were verified in both transient and stably transfected cells. In live cells, the probes are useful for kinetic assays alone or in combination with suitable live-cell dyes. While some fluorescence intensity was lost upon fixation and permeabilization, the FPs are still beneficial reagents for endpoint, fixed-cell assays as demonstrated by the Red FP-Mitochondrion vector in the apoptosis assay multiplexed with both a dye and an antibody. In both the live-cell and endpoint apoptosis assays, the results followed the same trends. This indicates that live-cell assays can be used to define time points and other parameters for endpoint assays, and that fixation and permeabilization procedures do not compromise the utility of FP vectors for multiplexed endpoint assays. In addition to the apoptosis assay demonstrated, other assay model systems are possible using one or more of the eight FP organelle and cytoskeletal biomarkers available in this collection. In particular, since these markers are ubiquitously expressed, they can provide very sensitive detection methods for cellular processes. Availability of these vectors enables the development of informative cell-based assays for industrial and academic endeavors. Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale. Bioimaging Application Note – FP Organelle Vectors REFERENCE 1. Ponte, P., Ng, S-Y., Engel, J., Gunning, P., and Kedes, L. 1984. Evolutionary conservation in the untranslated regions of actin mRNAs: DNA sequence of a human beta-actin cDNA. Nucleic Acids Res. 12(3):1687–1696. 2. Westphal, M., Jungbluth, A., Heidecker, et al. 1997. Microfilament dynamics during cell movement and chemotaxis monitored using a GFP-actin fusion protein. Curr. Biol. 7(3):176–183. 3. Watzele, G.and Berger, E. G. 1990. Near identity of HeLa galactosyltransferase with the human placental enzyme. Nucleic Acids. Res. 18(23):7174. 4. Llopis, J., McCaffery, J.M., Miyawaki, A., Farquhar, M.G., and Tsien, R.Y. 1998. 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A comparative footprinting study. BBA. 949(2):158-168. 19. Poot, M., Zhang, Y-Z., Kramer, J., et al. 1996. Analysis of mitochondrial morphology and function with novel fixable fluorescent stains. J. Histochem. Cytochem. 44(12):1363-1372. Unless otherwise specified, all products are for Research Use Only. Not for use in diagnostic or therapeutic procedures. Not for resale. bdbiosciences.com Notes Notes Bioimaging Application Note – FP Organelle Vectors BD Biosciences BD Biosciences bdbiosciences.com/bioimaging POB 13, Erembodegem-Dorp 86 B-9320 Erembodegem Belgium Tel.: (32) 2 400 98 95 Fax: (32) 2 401 70 94 [email protected] Worldwide Bioimaging Systems Europe Customer Service for product price, invoice or delivery inquiries, to place a product order, to check product availability. 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