FEMS Microbiology Letters 130 (1995) 293-300 Overproduced and purified receptor binding protein pb5 of bacteriophage T5 binds to the T5 receptor protein FhuA M. Mondigler, R.T. Viigele, K.J. Heller Universitiit Konstanz, * Fakultiitfir Biologic, Postfach 5560 (M605), D-77484 Konstanz, Germany Received 17 May 1995; revised 29 May 1995; accepted 31 May 1995 Abstract A promotor-less oad gene of bacteriophage T5, encoding the receptor binding protein pb5, was cloned into pT7-3 under the control of phage T7 promoter @lo. Induction with IF’TG resulted in enhanced production of pb5. Upon fractionation of the producing cells, most of the overproduced pb5 was found in the membrane fraction, which was most likely due to aggregation of the protein. The minor, soluble fraction of pb5 specifically inhibited adsorption of TS to its FhuA receptor protein. Inhibition was also seen with trace amounts of pb5, and binding of pb5 to Fhu4 appeared to be almost irreversible. Purification of pb5 from the cytosolic fraction was performed by FPLC using a MonoQ column. pb5, which did not bind to the matrix of the column, was obtained in almost pure form. The purified protein also inhibited T5 adsorption. Keywords: Bacteriophage T5; Escherichia coli; oad Gene; pb5 Receptor binding protein 1. Introduction Bacteriophages recognize specific interaction of phage exposed bacterial structures. ses of interactions between host bacteria by highly proteins with sutfaceSo far molecular analy- receptors and receptor binding proteins have mostly relied on in vivo studies like isolating and characterizing phage with altered adsorption characteristics [ 11. For filamentous phage this has been done by directly manipulating on the phage genome the gene encoding the receptor l Corresponding author. Present address: Institut fiir Mikrobi- ologie, Bundesanstalt fiir Milchforschung, Postfach 6069, D-24121 Kiel, Germany. Tel.: +49 (431) 609 340; Fax: +49 (431) 609 222. 037%1097/95/$09.50 0 1995 Federation .WDI 0378-1097(95)00221-9 of European Microbiological binding protein [2,3]. The strategy has been possible due to the small size of the genome which can be handled like a plasmid. For complex, tailed phages a different strategy has been applied. It relied on the isolation of phage-resistent bacterial mutants still expressing the receptor. Using these mutants, hostrange mutants of the phage were isolated and the alterations within the phage genomes were characterized [4-61. For the complex, tailed phage T5 we wanted to use a different strategy. Since we had cloned the gene encoding the receptor binding protein pb5 [7], we wanted to manipulate the gene and study the interaction of the altered gene product with the receptor, the FhuA Protein [8]. However, an essential prerequisite for such experiments is that pb5 expressed from a plasmid can bind to FhuA in its free form. Societies. All rights reserved 294 M. Mondigler et al. / FEMS Microbiology Letters 130 (1995) 293-300 In this communication we show that overproduced, purified pb5 can bind to FhuA. We further show that interaction between pb5 and FhuA can be studied without prior purification of pb5 and that binding of pb5 to FhuA appears to be comparably stable, as the binding of phage T5 to FhuA. resuspended in 200 ~1 of phosphate-buffered saline (PBS). The supematant was centrifuged at 5000 X g for 20 min to sediment membranes. The membrane pellet was resuspended in 100 ~1 of PBS, the supernatant contained the soluble cytosolic fraction. 2.4. Purification 2. Materials and methods 2.1. Bacteria, phages, plasmids, media and growth conditions E. coli BL21tDE3)pLysE [9] (named BL21 throughout this study) was used for overexpression of proteins under the control of the phage T7 @lo promoter. BL21/5 is a T5 resistant derivative of BL21. E. cofi AI32847 [lo] was used for the phage adsorption assays described below. Phages T5 and BF23 have been described before [ll], as have been media and growth conditions [12]. Plasmids used were pT7-3 [14] and pVK88 [7]. pVK88 contains a promoter-less oad gene of phage T5 cloned under the control of the phage T7 @lo promoter of pT7-3. 2.2. Electrophoresis of proteins Proteins were separated by SDS-PAGE according to the method described by Laemmli [13]. Gels with acrylamide concentrations between 8 and 12% were used. After separation, proteins were stained with Coomassie brilliant blue. 2.3. Overexpression of proteins For expression of oad cloned into the pT7-3 promoter plasmid [14], E. coli BL21 or its T5 resistant mutant BL21/5 were transformed with the respective plasmids and grown overnight in LB medium supplemented with 50 pg Ap per ml. The culture was diluted 1:lOO in the same medium. At an A 578 of 0.3, expression of oad was induced by addition of IPTG at a final concentration of 2 mM. Cells were harvested after 2 h of induction, concentrated lOO-fold, disrupted in a french press, and fractionated by centrifugation. Cell debris was sedimented by centrifugation at 1000 X g for 10 min and of pb.5 E. coli BL21, transformed with pVK88, was grown in 200 ml M9 medium supplemented with 0.4% casamino acids, 1 mM MgSO,, 0.1% glucose, and 100 pg/ml ampicillin. At an AST8 of 0.3 expression of oad was induced by addition of 2 mM IPTG. Three hours later the cells were harvested by centrifugation for 10 min at 10000 X g and 4°C. The pelleted cells were resuspended in 5 ml of 50 mM Tris/HCl, pH 8.0. After four cycles of french pressure treatment (10000 psi), insoluble material was removed by centrifugation for 1 h at 40000 X g and 4°C. The supematant material was applied to an FPLC MonoQ-column equilibrated with 50 mM Tris/HCl, pH 8.0. Proteins were eluted from the column first with 50 mM Tris/HCl, pH 8.0, and then with a gradient of O-O.5 M NaCl within the same buffer. 2.5. Phage adsorption assay An overnight culture of E. coli AB 2847 grown in LB medium was diluted 1:lOO in prewarmed LB medium. At an A578 of 0.3, cells from 2 ml of this culture were sedimented by centrifugation and resuspended in 100 ~1 of pb5-containing soluble fraction. After preincubation at 30°C for 15 min, 10 ~1 of a T5 lysate (titer: 3 X lo7 per ml) were added to 90 ~1 of preincubated cells. Two, 5, 10 and 20 min after addition of phages 10 ~1 aliquots were taken, diluted 500-fold in icecold PBS, vortexed intensively to stop phage adsorption, and centrifuged at 1000 X g for 5 min to sediment cells together with adsorbed phage. 100 ~1 aliquots of the supematant fluid, containing free unadsorbed phage, were 200 ~1 of E. coli AI32847 (A,,, = 1.0) and poured onto TB agar plates. 2.6. Phage inactivation assay 10 ~1 of a phage lysate (titer: 3 X lo7 per ml) were incubated at 30°C with 90 ~1 of different M. Mondigler et al. / FEMS Microbiology Letters 130 (1995) 293-300 dilutions of the soluble fractions containing pb5. After 2, 5, and 10 min, 10 ~1 aliquots were taken, diluted 500-fold in icecold PBS, and vortexed intensively. 100 ~1 aliquots of these dilutions were mixed with 5 ml TB top agar containing 200 ~1 of E. coli Al32847 (A,,, = 1.0) and poured onto TB top agar plates. 295 structures by self-assembly. On the other hand, overproduced proteins often form intracellular aggregates, termed ‘inclusion bodies’, which contain the protein in a denatured, biologically inactive form [16]. Since we were interested in a biologically active form of overproduced pb5, we focused on the cytoplasmic, soluble form of pb5 for further experiments. 2.7. Stability of binding of pb5 to the receptor 3.2. Binding of overproduced pb5 to its FhuA recepThis assay was performed analogous to the phage adsorption assay. After 15 min of incubation with pb5, the cells were sedimented, the entire supernatant was carefully removed, and the cells were resuspended in the same volume of PBS and incubated for 5 min. Centrifugation and incubation in PBS was repeated twice. After each incubation, 90 ~1 aliquots were used for phage adsorbtion assays, as described above. 3. Results and discussion 3.1. Overexpression of the phage T5 receptor bind- ing protein pb5 The oad gene of phage T5 expressing the receptor binding protein pb5 has recently been cloned [7]. For overproduction of pb5 with the aid of the T7polymerase/promoter system [14], the oad gene, carried on a 2693 bp HindIII-PvuII fragment of pVK3BIO [7], was subcloned into pT7-3 to yield pVK88 (Fig. 11, which was transformed into E. coli BL21. After induction with IPTG, expression of pb5 was monitored by SDS-PAGE of total cellular protein at different times after induction. Based on these results induction with 2 mM IPTG for 2 h was used for further experiments (data not shown). To analyze the cellular distribution of pb5, induced cells were harvested, desintegrated in a french pressure cell, and separated into a debris, cytoplasm and membrane fraction by centrifugation. Only a small amount of the overproduced pb5 was found in the cytoplasmic fraction, the largest amount was present in the membrane fraction (Fig. 2). This result is not surprising. On the one hand, structural phage proteins tend to aggregate [15], probably as a consequence of their natural property to build up phage- tor protein To test whether overproduced pb5 was capable of binding to FhuA, we wanted to develop a simple assay which was based on the blocking of FhuA for further interaction with T5 by pb5 present in the crude cytoplasmic preparation. However, to exclude unspecific blocking by other components, several control experiments had to be carried out. In all these experiments phage BF23 was used as a control. BF23 is closely related to T5 but uses the BtuB outer membrane protein as a receptor [11,17] instead of FhuA. First, we tested whether T5 was affected by substances present in the soluble fraction of either BL21[pT7-31 or BL21[pVK88]. Incubation for 10 min at 30°C with undiluted soluble fraction of BL21[pT7-31 resulted in almost 100% inactivation of T5. No inactivation was seen when the soluble fraction of BL21[pVK88] was applied. In addition, no inactivation by the soluble fraction of BL21[pT7-31 was seen for BF23 Table 1. Since BL21 cells lack the BF23 receptor protein in the outer membrane (Mondigler and Heller, unpublished results), the data indicated that soluble, unsedimented FhuA receptor particles were responsible for inactivation of T5 by the soluble fraction of BL21[pT7-31. This was verified by using the fhuA strain BL21/5 for isolation of soluble fractions: no inactivation of T5 occurred in this case (Table 1). The second control experiment was designed to rule out unspecific binding to the outer membrane of E. coli of substances present in the soluble fractions of BL21[pT7-31 or BL21[pVK88], which could make the receptors inaccessible for phage. We used BF23 as a tester phage. No inhibition of BF23 adsorption was seen when the cells used for adsorption assays were preincubated with the soluble fractions of 296 M. Mondigler et al. / FEMS Microbiology Letters I30 (1995) 293-300 IS1 p 2.7 kb HindIll-hull j --- fragment of pVK3/lSl-1 2.4 kb Hindlll-Smal fragment of pT7-3 ! H pVK88 pT7-3 (P/S) +_ .~~~~ _ ._~ IS1 4 @I 0 promoter H ’ bla Fig. 1. Physical and genetic map of pVK88. pVK88 was constructed by cloning into pT7-3 [14] a 2.7 kb PuuII-Hind111 fragment of pVK3/ISl-1 [12]. The fragment, obtained by cleaving at the PouII site within the IS1 and the Hind111 site 71 bp downstream of oad, contains a promoterless oud gene and 678 bp of the IS1 element. Thus, the oad gene in pVK88 is exclusively under the control of the T7 @lo promoter. DNA fragments of different origins (T5, ISl, and pT7-3) are indicated by differently shaded boxes. Directions of transcription are indicated by arrows for oad and bla. Restriction enzyme cleavage sites are: A: ApaI; B: BumHI; Bc: EC/I; Bg: BglII; H: HindIII; P: PuuII; S:SmaI; SC: SacI; X: XhoI. Sites in brackets are no longer accessible to the respective enzymes. cated that pb5 within the crude cell lysate was most likely capable of blocking the soluble FhuA receptor particles. This was proven by the result that E. coli AB2847, preincubated for 15 min with the soluble BL21[pT7-31 or BL21[pVK88], respectively. Thus, unspecific inhibition of adsorption was ruled out. The fact that no inactivation of T5 was seen by the soluble fraction of BL21[pVK88], already indi- kDa Ma b pT7-4 c La _____ b c pVK88 Fig. 2. Cellular localization of overproduced pb5. Exponentially growing cultures of BL21/5[pT7-31 and BL21/5[pVK88] were induced for 2 h with 2 mM IPTG. Cells were harvested and separated into a debris (a), membrane (b), and cytoplasmic fraction (c) as described in Materials and methods. The fractions were subjected to SDS-PAGE. On the left the positions and molecular masses of marker proteins are indicated. The position of pb5 is shown in the right margin. (MI marker proteins. M. Mondigler et al. / FEMS Microbiology Letters 130 (1995) 293-300 Table 1 Effect of soluble fractions of BL21 cells on viability of phages T5 and BF23 Number of phages (%) after incubation fraction of different BL21 strains a Relative amount of soluble fraction BL21[pT7-41 1:l 1:lO 1:lOO 0 (PBS) with soluble BL21[pVK88] BF23 T5 2 32 110 100 T5 103 115 90 100 BF23 127 110 99 100 a Phage numbers higher than 100% are most likely due to dissolving fraction of BL21/5[pVK88], was blocked for adsorption of phage T5: the titer of free phages in the adsorption assay stayed constant during the whole period of incubation (Fig. 3). In contrast, the soluble fraction of BL21/5[pT7-31 did not show any effect on T5 adsorption: after 30 min almost all of the phage added were adsorbed to their host cells (Fig. 3). Together with the fact that BF23 was not inhibited by the soluble fractions of either BL21/5[pT7-31 or BL21/5[pVK88], these experiments demonstrated that the soluble fraction of BL21/5[pVK88] con- unadrorbed Dhape 1%) l~,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,i 02 5 10 15 20 25 297 30 2s time (mid Fig. 3. Inhibition of T5 adsorption by overproduced cytosolic pb5. T5 adsorption was analyzed to E. coli AB2847 cells preincubated with either cytosolic fraction from BL21/5[pT7-31 (Cl) or BL21/5 [pv~88] ( + ), as described in Materials and methods. BL21/5[pT7-41 BL21/5[pVk88] T5 T5 130 125 122 100 of phage aggregates 93 91 82 100 109 98 104 100 by soluble fraction. tained a component which was able to bind to the FhuA receptor protein. Since this component was not present in the soluble fraction of BL21/5[pT7-31, it was most likely pb5. 3.3. Purification of pb5 overproduced from BL21/ 5w7w To verify that pb5 was indeed responsible for the FhuA-blocking activity present in the soluble fraction of BL21/5[pVK88], we tried to purify pb5 and demonstrate blocking activity for the purified protein. 200 ml of an E. coli BL21[pVK88] culture were induced for synthesis of pb5 by addition of 2 mM IPTG for 2 h. After concentration and disruption of the cells, followed by removal of insoluble material (including aggregated pb5), proteins of the soluble fraction were separated on a MonoQ column by FPLC. A protein corresponding in size to pb5 did not bind to the MonoQ matrix and was eluted within fractions nos. 2 and 3 in almost pure form. Only one other protein of approx. 20 kDa was detectable in these fractions (Fig. 4). We used several FPLC fractions to test whether binding to FhuA of a component within the fractions could be demonstrated. Binding to FhuA was indicated again by blocking FhuA on the cell surface for adsorprtion of phage T5. When fractions 2 and 3 from the FPLC separation were used, they exhibited blocking activity (Table 2). The activity followed the concentration of the presumed pb5 within the FPLC fractions. Fraction 2 contained the majority of presumed pb5 and blocked T5 adsorption completely, while fraction 3 contained about one third of the M. Mondigier ei at. / FEMS Microbiology Letters 130 (199s) 293-300 298 Table 2 Binding of purified pb5 to FhuA by undiluted crude cytosol 98 Inhibition of T5 adsorption (%) a by undiluted FPLC fraction no. 2 3 4 19 22 96 24 9 a The mean of three independent 0 23 0 experiments 0 is shown. amount of fraction 2 and blocked T5 adsorption by about 25%. No protein was visible in fraction 4; however, approx. 10% of blocking activity was seen with this fraction. The 20 kDa protein was present in fractions 2 and 3 in about equal amounts. Other fractions were inactive in this assay: T5 adsorption was not reduced, it was comparable to the adsorption to untreated control cells. These results very strongly indicated that pb5 indeed was responsible for the blocking activity for T5 adsorption present in the soluble fraction of BL21/5[pVK88]. Thus at least a fraction of the overproduced, soluble pb5 must be in a biologically active conformation, able to bind to the FhuA receptor protein. The fact that an overproduced receptor binding protein of a phage can bind to its receptor is by no means self-evident. In the phage tail, receptor binding proteins serve two functions: (i) they allow for highly specific receptor-binding, and (ii) they have to signal successful binding to the phage machinery needed for infection. This signalling most likely starts by a conformational change of the receptor binding protein, induced by the binding to the receptor, and is transmitted to neighbouring proteins by induction of conformational changes in these proteins. Finally, these conformational changes result in a tail structure competent for DNA passage, and in triggering DNA release from the head (see [l] for a review). Taking into account the intimate contact and mutual interdependence with respect to conformational changes of tail proteins, one could have imagined that the receptor binding protein during assembly is forced into a special conformation within the phage tail, thereby adopting a conformation unstable in the free, soluble form. However, our results suggest that pb5 is rather synthesized in the same conformation as it is assembled into the T5 tail. kDa ...O’ t- 66 c- 46 c- 29 ‘~‘,” : /; & I SF 1 I 2 I I I I 6 I I I I I 10 I 1 I 1 SF 1 I 16 I I I I 20 I I I I I I 24 FPLC fractions Fig. 4. Separation by FPLC of soluble proteins of BLZl[pVK88]. Soluble proteins were obtained from BL21[pVK88] cells overproducing pb5 and separated by FPLC on a MonoQ column as described in Materials and methods. Fractions were collected and aliquots of these were subjected to SDS-PAGE. The numbers of the fractions are indicated in the lower margin. SF shows the soluble fraction used for FPLC separation. The positions of pb5 (left margin) and of marker proteins (right margin) are shown. M. Mondigler et al. / FEMS Microbiology Letters 130 (1995) 293-300 3.4. Afinity and stability of binding of pb5 to FhuA To estimate the quantity of overproduced pb5 present in the soluble fraction, phage adsorption assays were carried out with progressive dilutions of the soluble fraction of BL21/5[pVK88]. A 60-fold dilution inhibited phage adsorption with the same efficiency as the undiluted soluble fraction. A lOOOfold dilution still caused an inhibition of phage adsorption of 20% as compared to the undiluted soluble fraction (Fig. 5). Binding of phage T5 to its receptor has been described to be irreversible due to covalent bond formation [18]. However, since these bonds are not formed between pb5 and FhuA but rather between three copies of tail protein pb4 [19], binding of free pb5 to FhuA may be reversible. To test the stability of binding of pb5 to FhuA, cells preincubated with the soluble fractions were washed with PBS up to three times and incubated after each wash to allow dissociation of bound pb5 from its receptor. Thereafter, T5 phage were added and adsorption was monitored. While the number of free phage in the supematant decreased by 90% when control cells (preincubation with soluble fraction of BL21/5[pT731) were used, no reduction in the number of approx. 3.2 X lo7 plaque forming units per ml in the supernatant was observed when preincubated, washed cells were used. This indicated that no dissociation of pb5 1000 no. of unadlorbed phwe 0 0 500 ” --“\ 1 10 \ \ 100 I 1000 dilution factor Fig. 5. Inhibition of TS-adsorption by different concentrations of pb5. E. coli AB2847 cells were incubated with different dilutions of cytosolic fraction from BL21/5[pVK88] and subsequently analyzed for T5 adsorption, as described in Materials and methOdS. 299 from FhuA occured during the washing procedure. Thus, binding of pb5 to FhuA appears to be very stable even in the absense of covalent bond formation of pb4. This result supports data of studies on the interaction between intact phage and purified FhuA receptor protein [20]. These studies indicated that the affinity of T5 for FhuA was rather high, since nano-molar concentrations of FhuA readily inactivated T5 phage. In the present study we did not examine the affinity of pb5 to FhuA in particular. However, the fact that very small amounts of pb5 were needed for receptor blocking supports the view that the high affinity for FhuA of phage T5 is determined by the high affinity of pb5 for FhuA. Acknowledgements We thank V. Krauel for construction of pVK88 and T. Holz for carrying out some of the experiments on inhibition of T5 adsorption. This work was supported by the Deutsche Forschungsgemeinschaft (He 1375/3-3X References [l] Heller, K.J. (1992) Molecular interaction between bacteriophage and the gram-negative cell envelope. Arch. Microbial. 158, 235-248. [2] Stengele, I., Bross, P., Garces, X., Gray, J. and Rasched, I. (1990) Dissection of functional domains in phage fd adsorption protein: discrimination between attachment and penetration sites. J. Mol. Biol. 212, 143-149. [3] Endemann, H., Bross, P. and Rasched, I. (1992) The adsorption protein of phage IKe. Localization by deletion mutagenesis of domains involved in infectivity. Mol. Microbial. 6, 471-478. 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