2.12. 土地利用履歴の異なるスギ人工林および照葉樹二次林における土壌微生物群集 Structure of soil microbial communities in sugi plantations and semi-natural broad-leaved forests with different land use history* Miho Matsushita1, Satoshi Ito2, Sadatoshi Meguro2, Shinsaku Kawachi2 1 2 United Graduate School of Agriculture, Kagoshima University, Japan. University of Miyazaki, Japan. *Manuscript submitted for Canadian Journal of Forest Research. Abstract: Phospholipid fatty acid (PLFA) profiles were used to evaluate microbial community compositions from different soil layers of sugi (Cryptomeria japonica) plantations and semi-natural secondary forests in a warm-temperate region in southeastern Kyushu, Japan. These forests had previously been utilized as meadows or coppices. Cluster analysis and principal components analysis (PCA) demonstrated the differences in the microbial community structure in the current vegetations (sugi plantations or semi-natural forests) in the FH layer, but the difference between previous land use types (meadows or coppices) could be detected in the A layer. In the upper part of the A layer (0-5cm), the influence of the previous land use history apparently exceeded that of the current vegetation. However, in the deeper part of the A layer (5-10cm), the influence of the previous history was weaker, and both the influence of the current vegetation and the previous land use type could be detected. In the FH layer, the significant influences of the current vegetation on the soil microbial community structure were attributed to the soil chemical characteristics of pH and C/N according to the result of canonical correspondence analysis (CCA). In the 0-5cm part of the A layer, the organic matter and C and N contents were related to the influence of the previous type of land use on the microbial community structures. However, it cannot be assumed that these soil chemical characteristics were the principal factors showing the influence of the previous land use history, because the difference between the sites was very small. We discuss the importance of the rhizosphere of the understory for microbial communities in the upper soil layer in a forest. Keywords: PLFA; Microbial community; Land use history; Sugi plantations; understory. Introduction In all ecosystems, soil microorganisms play important roles in the decomposition of organic matter, nutrient cycling, and plant nutrient availability. Understanding soil biology and ecology is increasingly recognized as important for the restoration and sustainability of ecosystems. In order to retain or recover the biodiversity of forest ecosystems, the factors affecting microbial communities from the viewpoint of forest ecology and landscape ecology should be clarified. A gradient of increasing intensity of disturbance represented by a range of land use histories can capture the variation within soil chemical characteristics and vegetation across the landscape, and may provide insights into the complex set of factors that affect soil microbial biomass and community structure. It is well documented that different plant species have different characteristics of litter quality, root exudates and nutrient uptake, affecting soil microbial communities and soil microbial biomasses and their activity (Priha et al., 2001, Kourtev et al., 2002a, 2002b, Grayston et al., 2004). Previous land-use histories have been documented, and it was concluded that previous land use had a significant effect on species composition and the diversity of forests (Ito et al., 2004). Thus, it is suggested that the difference in plant species composition brought about by previous land use histories could also affect soil microorganisms. Concerning the relationship between land use history and the soil microbial community, it was reported that cultivation or grazing histories had long-term effects on soil fertility, pH and the microbial community structure in grassland ecosystems (Steenwerth et al., 2003). In forest ecosystems, the impact of cultivation or field firing on soil nourishment circulation has been investigated (Christine et al. 2001). However, there is little knowledge about concomitant changes in the soil microbial community structure due to multiple factors of soil chemical characteristics and vegetation associated with land use history in forest ecosystems. We presumed that a microbial community with the specific environmental requirements could be selected and supported in a unique soil environment created in the area by the alteration of the soil chemical characteristics according to the land use history of an area. If the soil environment produced by the previous land use still remained in the present forest, the evidence of that land use history should be clearly detectable in the deeper soil 107 layer rather than the surface soil layer, because soil sequentially accumulates from the top. Therefore, we hypothesized that 1) the structure of the microbial community near the soil surface reflects the structure of the present vegetation, and 2) the structure of the microbial community in the deeper soil layers reflects the structure of the past vegetation. Study site The study site was Miyazaki University Forest (502 ha), located in southwestern Japan (131E, 32N). The annual mean temperature and precipitation is 16.5•• and 2800 mm, respectively. Parts of this forest were previously utilized as coppices for wood for fuel or as meadows for hay, but since the 1950s, some of these coppices and meadows have been replanted with sugi (Cryptomeria japonica D.Don) and hinoki (Chamaecyparis obtuse Endl.) plantations. Other remnant coppices and meadows were abandoned in the 1960s and have since regenerated naturally, with the secondary forest consisting of both evergreen and deciduous broad-leaved trees. These seminatural forests have been unmanaged since they were abandoned. In contrast, the sugi plantations in Miyazaki University Forest have been managed uniformly according to a management schedule, including ground preparation by hand (not using fire or any herbicides), weeding and shrub-clearing for 10 years after planting without using any herbicides, with first thinning being done at ca. 25-30 years. The stands were categorized into four types according to their previous land use (coppices or meadows) and their current status (semi-natural secondary forest or sugi plantation): 1. semi-natural secondary forest developed on abandoned coppices (abbreviated as Bc); 2. semi-natural secondary forest developed on abandoned meadows (abbreviated as Bm); 3. sugi plantations established on former coppice sites (abbreviated as Sc); 4. sugi plantations established on former meadow sites (abbreviated as Sm). Three stands per category, or 12 stands altogether, were selected for data collection in order to collect from stands with as similar a topography as possible. A single 20m•~20 m plot was positioned in each stand, allowing buffers of at least 5 m from the stand edge in order to avoid possible edge effects from different type of patches. Because the 108 former meadow sites had been fragmented into small patches, one plot for type Bm (Bm1) was limited to 20m•~15 m. The canopy composition of semi-natural forests that had developed on abandoned meadows (Bm) and coppices (Bc) was mainly dominated by Quercus serrata (deciduous) and Castanopsis cuspidata (evergreen), respectively. The stand age of Bc was 43-71 years, Bm was 37-43 years, Sc was 34-38 years, and Sm was 35-36 years. The A0 layer was thin, and the surface soil bare in several places. Methods Soil sampling and analysis Sampling of the 12 sites was conducted in May of 2005. Fresh litter and twigs were removed from a 15cm2 square area and ten soil cores per site were taken to the depth of 10cm in the A layer by gently pounding metal rings (ƒÓ50•~51mm) into the ground. The FH layer and upper (0-5cm) and lower (5-10cm) part of the A layer were then divided into separate samples. The samples were sieved (sieve mesh 2mm) to remove root and stones. All of the analyses were done with fresh soil and kept at 4•• 1 week from the harvest, except the PLFA analysis, for which the soils were stored at –20••. The moisture of the soil was determined by drying the samples at 105•• for 24 h. The soil organic matter content was measured as the loss by igniting the dried samples at 700•• for 1 h. Soil pH (H2O) was measured in deionised water (1:2.5, soil: water). Total organic C and total N were measured from air-dried samples using an automated CHN analyzer (Perkin Elmer Series 2 CHNS/O Analyzer 2400). Dissolved organic carbon (DOC) and dissolved nitrogen (DN) were measured from the filtered water extract using a total carbon analyzer (Shimadzu TOC-5000). PLFA analysis Phospholipid fatty acid (PLFA) analysis uses the lipids of the cell membrane within microorganisms as biomarkers for specific groups of organisms, thus creating a profile or fingerprint of the microbial community. The total concentration of PLFA is a measure of the viable microbial biomass, since phospholipids are readily degraded after cells die (Zelles, 1997). The phospholipid extraction and analysis of PLFAs was conducted as described by Frostegard et al. (1996) with some modifications (Pennanen et al.,1999). To briefly summarize this procedure, 2g fresh weight of soil samples were extracted with a chloroform:methanol:citrate buffer mixture (1:2:0.8) and the lipids were separated into neutral lipids, glycolipids and phospholipids in a silicic acid column. The phospholipids were subjected to mild alkaline methanolysis and the fatty acid methyl esters were separated by a gas chromatograph (Shimadzu 18A), equipped with a frame ionization detector and a DB-1 (J&W Scientific) capillary column (30 m in length), using He as the carrier gas. Peak areas were quantified by adding methyl nonadecanoate fatty acid (19:0) as an internal standard. Fatty acids are designated in terms of the total number of carbon atoms:number of double bonds, followed by the position of the double bond from the methyl end of the molecule, indicated by ƒÖ and a number. The prefixes a, i and br indicate anteiso, iso and unknown branching, respectively. The prefix cy indicates a cyclopropane fatty acid and methyl branching (Me) is indicated as the position of the methyl group from the carboxyl end of the chain. The prefix C (C15:1) indicates that the PLFA has 15 carbon atoms and one double bond, but the arrangement of the carbon atoms (e.g., branching position) is not confirmed. The abbreviations t and c indicate trans and cis configuration of the double bonds. As for the alphabet to be assigned to after ù, the bond position is unidentified, but shows that it is different fatty acid. The sum of 33 PLFAs was identified. The monoenoic and cyclopropan unsaturated PLFAs 16:1ƒÖ9, 16:1ƒÖ7, 18:1ƒÖ7, 18:1ƒÖ5, cy17:0, cy19:0 were chosen to represent Gram-negative bacteria (Zelles 1999). The branched, saturated PLFAs i14:0, i15:0, a15:0, i16:1, i16:0, i17:0, a17:0, and some of the monoenoic unsaturated PLFAs 18:1ƒÖ9, 19:1 were chosen to represent Gram-positive bacteria (Zelles 1999, Bartelt-Ryser et al., 2005). The methylated, branched, saturated PLFAs 10Me16, 10Me17, 10Me18 were used as an indicator of actinomycetes (Zelles 1999). The quantity of 18:2ƒÖ6,9 was used as an indicator of the fungal biomass (fungal PLFA). It was assumed that the primary source of this eukaryotic PLFA was soil fungi (Zogg et al., 1997). Statistical analysis A two-way analysis of variance (two-way ANOVA) was carried out on the soil characteristics and the total PLFAs and that of certain groups to determine statistically significant differences between the main experimental factors: current stand status and previous land use. Three different soil layers were analyzed separately. Comparison of the means of soil characteristics for different experimental factors, and correlation analysis between PLFA and soil characteristics were performed in FreeJSTAT8.2. All multivariate analysis was carried out on the PLFA after log transformation. The microbial community structures were classified by cluster analysis using a Euclidian distance matrix based on the PLFA data of all 36 samples (12 sites•~3 layers) and by the ward’s method. The PLFA data was analyzed by principal components analysis (PCA). PCA was done separately for the three different layers of soil samples. The relationship between the microbial community structure and soil characteristics was analyzed by canonical correspondence analysis (CCA). CCA permits direct analysis of the PLFA profiles in relation to specific environmental variables, like soil characteristics and site factors. Soil characteristics are represented by vectors. All multivariate analysis was made on PC-ORD Version 4 (McCune and Mefford, 1999), a PCbased software program. Results Soil chemical characteristics The soil chemical characteristics of the four stand types (Bc, Bm, Sc and Sm) and each of the three soil layers (the FH layer, the 0-5cm and the 5-10cm parts of the A layer), are shown in Table 1.The results of two-way ANOVA between the “present vegetation” and “previous landuse type” are also included in the table. In the FH layer, there were statistically significant differences only in moisture, pH, the C content and the C/ N ratio. The moisture of Bm was the lowest among the four sites. The pH and C content of the semi-natural forests (Bc and Bm) were lower than those of the sugi plantations (Sc and Sm). The value of the C/N ratio of the semi-natural forests was higher than those of the sugi plantations. In two parts (0-5cm and 5-10cm) of the A layer, the soil chemical characteristics except the dissolved organic carbon (DOC) and dissolved nitrogen (DN) showed a similar tendency for the four sites. The organic matter (OM) of Bm and Sm, which were previously used as meadows, were higher statistically significantly than Bc and Sc. The interaction was detected only in the C/N ratio. Other characteristics significantly differed by current vegetation type, and the values obtained from the seminatural forests were lower than from the sugi plantations. As for DOC and DN, there were no significant differences 109 Table.1. Characteristics of the four study sites type. OM: organic matter, DOC: dissolved organic carbon, DN: dissolved nitrogen. AVERAGE (•}SD) A: Present vegetation, B: Previous land-use type. *, P<0.05; **, P<0.01; ***, P<0.001; n.s: not significant. Bc: semi-natural secondary forest developed on abandoned coppices; Bm: semi-natural secondary forest developed on abandoned meadows; Sc: sugi plantations established on former coppice sites; Sm: sugi plantations established on former meadow sites. between the four sites in the top 0-5cm part of the A layer. However, the DOC and DN of the semi-natural forests were lower than the sugi plantations in the 5-10cm layer. PLFA profiles The microbial biomass, as measured by total PLFA, tended to decrease with an increase in the depth of the Fig.1. Total PLFA of the samples. Each value is mean +- standard error (n=3). Symbols are the same as shown in table1. 110 soil layer (Fig.1). The total PLFA in the FH layer of the sugi plantations (Sc and Sm) was significantly lower than that in the semi-natural forests (Bc and Bm). In the upper part (0-5cm) of the A layer, the total PLFA was almost the same level for the four sites, but in the deeper soil layer (510cm), it was again lower in the sugi plantations than in the semi-natural forest. Table.2 The PLFA amount of each taxonomic groups of microorganism, the PLFA ratio, and the result of two-way ANOVA between •gpresent vegetation•h and •gprevious land-use•h AVERAGE (•}SD) A: Present vegetation, B: Previous land-use type. *, P<0.05; **, P<0.01; ***, P<0.001; n.s: not significant. Symbols are the same as shown in table1. The PLFA amount for each taxonomic group of microorganisms, the ratio of PLFA, and the result of twoway ANOVA between the “present vegetation” and “previous land-use type” are shown in Table 2. In the FH layer, the PLFA amount of each group except the gram-positive bacteria was lower in the sugi plantations than in the semi-natural forest. In addition, the fungal/bacterial PLFA ratio was lower in the sugi plantation than in the semi-natural forest, but conversely, the gram-positive/gram-negative bacterial PLFA ratio was higher. In the 0-5cm layer, the amount of actinomycetes and the gram-positive/gram-negative bacterial PLFA ratio were higher in the sugi plantations than in the semi-natural forests. No significant tendency was detected in the PLFA of the other groups. In the 5-10cm layer, the gram-negative bacterial and fungal PLFA were lower, but the grampositive/gram-negative bacterial PLFA ratio was higher in the sugi plantation than in the semi-natural forest. On the dendrogram of the 36 PLFA samples (12 sitesthree soil layers) obtained by cluster analysis (Fig.2), the 36 samples in the first stage were largely classified into two groups according to the soil layer. The group of the A layer was further classified into two smaller groups according to the sampling depth. The group of the FH layer was clearly divided into two smaller groups according to the current vegetation (B-: S-). The upper part of the A layer (0-5cm) group was significantly divided into two groups by previous land-use type (-c: -m), and the lower part of the A layer (5-10cm) group was classified into three groups, Bc, Sc, and the previous meadow type (Bm, Sm). The PLFA profiles in each of the three soil layers of the 12 stands were analyzed by principal components analysis (PCA), as shown in Fig. 3. In the FH layer, the scatter of the PLFA profiles generally corresponding to the differences of current vegetation was distributed along PC axis 1, which explained 59.5% of the variation (Fig.3a). The previous land use types were separated better in the semi-natural forest sites than in the sugi plantations along PC axis 2 (23.2% of the variation). In the 0-5cm layer, the PCA showed characteristic scatter in distinct clusters of three groups, Bc, Sc and the previous meadow type (Bm and Sm) (Fig. 3b). On the other hand, in the 5-10cm soil layer, PCA showed different distributions corresponding to current vegetation along the first axis, and to previous land use type along the second axis, respectively (Fig.3c). 111 Fig.2. Cluster dendrogram of 36 (12 sites•~3 soil layers) samples. The sample name and no. is indicated to the right of the dendrogram. B: semi-natural forest; S: sugi plantation; -c: coppice; -m: meadow; FH: FH layer; A: A layer, the 0-5cm and the 5-10cm layer (-A05:-A510). Analysis of the loadings of the PLFA on PC1 showed that the discrimination between current vegetation was mainly attributed to the higher contents of some PLFAs characterized by Gram-negative bacteria (19:1ƒÖb, 16:1ƒÖ9, 18:1ƒÖ7) in the FH layer samples (Fig.4a). The FH layer samples of the previous meadow type sites were clearly separated along PC2 mainly due to two PLFAs, 15:1 and 18:2b in the Bm and Sm samples. In the 0-5cm part of the A layer, the discrimination of previous land use types along PC1 was mainly attributed to the presence of PLFA 18:1ƒÖ7 in previous coppices type sites (Bc and Sc), and 18:2ƒÖb in Bc and the lack of 15:1 in Sc (Fig.4b). In the 5-10cm layer, 18:1ƒÖ7 and 112 Fig.3. The scores of the sites in PC analysis of the phospolipid fatty acids (PLFAs) of the samples. a: FH layer, b: A layer 05cm, c: A layer 5-10cm. Circles represent the semi-natural secondary forest and squares the sugi plantations. Open symbols represent sites developed on the abandoned meadow and closed symbols sites developed on the abandoned coppice. 16:1ƒÖ7t were not detected in many sugi plantation sites, and 18:2ƒÖb was detected only in Bc. PLFA a17:0 was detected only in previous meadow type sites (Bm and Sm), and got a high score on PC 2 (Fig.4c). Relationship between PLFA profiles and soil chemical characteristics Fig.4. Scores of the of the phospolipid fatty acids (PLFAs) of the samples. a: FH layer, b: A layer 0-5cm, c: A layer 5-10cm. Using canonical correspondence analysis (CCA), we attempted to identify the factors which could explain the pattern of the PLFA profiles (Fig. 5; Table 3). In the FH layer, the scatter generally corresponding to the differences of current vegetation was distributed along the first axis, which explained 56.7% of the variation (Fig.5a). The soil characteristics that largely account for the variation in the microbial community structure of the current vegetation were distributed along Axis 1. The C/N ratio, moisture and pH gave a significant positive correlation for Axis 1, and the N content gave a negative Fig.5. CCA ordination biplot of the 12 sites of four stand types. Circles represent semi-natural secondary forest, squares sugi plantations. Open symbols represent sites developed on the abandoned meadow and closed symbols sites developed on the abandoned coppice. Soil characteristics included to the CC analysis are presented as vectors and are moisture, pH, carbon content (C), total nitrogen content (N), dissolved nitrogen (DN), dissolver organic carbon (DOC) and carbon to nitrogen ratio (C/ N). a: FH layer, b: A layer 0-5cm, c: A layer 5-10cm. correlation for Axis 2 (Table 3). In the 0-5cm layer, the CCA showed the scatter in distinct clusters of three groups, Bc, Sc, and the previous meadow type sites (Bm and Sm) (Fig.5b). The organic matter and C and N contents gave a significant negative correlation for Axis 1 and the C/N 113 Table.3. Correlation coefficients of the soil characteristics to the first and second axis of CCA ratio gave a negative correlation for Axis 2. The clusters of the 5-10cm layer had a similar pattern as that in the 05cm layer; however, the vectors lengths and the angles of their positions with respect to the two axes were different. The CCA biplot of the previous meadow type sites separated Bm from Sm (Fig.5c). Moisture and organic matter gave a significant negative correlation for Axis 1, and all soil chemical characteristics except the C/N ratio related to Axis 2. Discussion Some reports on the chemical characteristics in forest soils have shown that the pH and C/N ratios were higher in sugi plantations than in broadleaf tree forests (Toda et al., 1996, Ichikawa et al., 2002, 2003a, 2003b), as was also the case in our study. They supposed that the higher levels of pH and C/N ratio would be attributed to the characteristics of sugi litter, in particular to its high Ca content and quality (Katou et al., 1989, Sawada et al., 1991). Our results also indicated a lower fungal/bacterial PLFA ratio and a higher gram-positive/gram-negative bacteria PLFA ratio in the FH layer samples of the sugi plantation (Table 2). The higher pH would thus be suitable for the growth of bacteria, and the lower pH would be suitable for the growth of fungi (Killham, 1994, Frostegard et al., 1996, Grayston et al., 2005). Our results are also supported by Bååth et al. (2003), who found that gram-positive bacteria gave a positive correlation with soil pH. In the A layer, the influences of land use history on microbial community structure were related to organic matter and C and N content as soil nutrient. Steenwerth et al. (2003) suggested that the high productivity, the annual complete die-off of a plant community, and the dense accumulation of roots in the upper 10cm of soil could cause meadows to build a large pool of active soil organic matter. Our sites, which were previously used as meadows, 114 may also have accumulated organic matter in the soil for that reason. However, it cannot be assumed that these soil chemical characteristics were the principal factors showing the influence of the previous land use history, because the difference between the sites was very small. In our study sites Bc, Bm, Sc and Sm, the understory plant species diversity of and the influence of land use history on the sites has already been clarified by Ito et al. (2004). In both current vegetation types (sugi plantations and semi-natural forests), the previous meadow type sites had a lot of perennial forbs, and the previous coppices type sites are abundant in evergreen shrubs and trees. It has been reported that microbial communities in fieldcollected soils beneath the two exotics and the native Vaccinium spp. were clearly different in both their structure and function, nitrogen dynamics and litter decomposition (Ehrenfield et al., 2001, Kourtev et al., 2002a, 2002b). In a pot experiment, plant species affected the soil microbial community structure and activity by the differences in the quality of litter and the nitrogen uptake of roots (Kourtev et al., 2003). In our results, the previous land use type had a significant influence on the soil microbial community in the A layer, which was deeper than the FH layer. Therefore, the influence of previous land use type could be determined from the roots of the understory, not directly by the leaf litters supplied from the understory. It is well known that plant species have a selective influence on microbial communities in rhizospheres (Grayston et al., 1998, Smalla et al., 2001, Priha et al., 1999). The discrimination of microbial community structures by the previous land use was attributed to some single fatty acids, not to the overall PLFA composition (Table 2, Fig.4). This may suggest the existence of a special microbial community structure, which could live together with the specific plant species, as Priha et al. (1999) also showed that the quality, not the quantity of organic matter supplied from plant species influenced the soil microbial community. Therefore, the plant species composition of the understory would be a significant factor affecting the difference in the microbial community structure between the previous land use types in the A layer, aside from the soil chemical characteristics. Another reason might be that the canopy composition and tree age were different between Bc and Bm. The Bc site contained two relatively old stands of 67 years, as compared with the other stands of 30–39 years. The microbial community structure was definitely divided in the semi-natural secondary forest as compared with the sugi plantation (Fig.3a). If the canopy composition was different, the quality of the leaf litter and moisture would be different, also. These influences of canopy composition should be detected in the deeper layer as the evidence of land use history. However, the difference in the microbial community structure by previous land use was detected in sugi plantations, though Sm and Sc had stands that were similar ages (SM=31-32 years; SC=30-34 years). Thus, these results supported the fact that previous land use would be the critical factor affecting the microbial community structure, persisting for at least several decades after the establishment of plantations. Many researchers have reported that the influence of vegetation was significantly detected in the organic soil more than the mineral soil (Priha et al., 1999, 2001). One reason for this is that in the organic soil, there was more diversity to start with, which makes it possible for different groups to be enriched in different conditions, whereas the original microbial community in the mineral soil was probably less diverse. In this study, the total PLFA of the 0-5cm layer samples was 1.2-2.1 times as large as those of the 5-10cm layer samples. Thus, the influence of environment was definitely detected in the 0-5cm layer rather than in the 5-10cm layer. In addition, herbaceous plants tend to have dense roots that spread out but do not reach deep down, and even the roots of woody plants are shallow but dense when the tree is young (Karizumi, 1979). These factors also support the fact that the influence of the land use history of an area clearly appears in the upper part of the A layer. As described above, in our study sites the influence of current vegetation appeared in the FH layer and the influence of the previous land use history definitely appeared in the upper part of the A layer (0-5cm). Both influences were detected together in the deeper layer (510cm). The influence on current vegetation by leaves supplied from a dominant species could gradually penetrate into the forest soil from the surface to a deeper layer. However, a distinctive microbial community structure could be formed in the 0-5cm soil layer by the microorganisms group strongly influenced by the root of the understory concentrated in the upper part of the forest soil. The influence of the previous land use history on the microbial community structure could have been maintained by the roots of the understory in the stands, even if the plant vegetation had drastically changed. 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