A Randomized, Single-Blind, Placebo-Controlled, Phase 1/2 Study of ALN-AAT, an Investigational RNAi Therapeutic for the Treatment of Alpha-1 Antitrypsin Deficiency Associated Liver Disease: Interim Study Results 12th Annual Meeting of the Oligonucleotide Therapeutics Society (OTS) 28 September 2016 1 Alpha 1 Antitrypsin (AAT) Deficiency Background AAT is a serine proteinase inhibitor (serpin) • Inhibits neutrophil elastase, trypsin, thrombin, chymotrypsin, etc • Abundant plasma protein , primarily synthesized in hepatocytes AAT deficiency • • • • “PiZZ” phenotype accounts for 95% of AAT-deficient patient population Z allele likely arose in N Europe, present in up to 5% of the population Z allele has point mutation Glu342Lys Autosomal codominant inheritance of disease • PiZ has slow rate of protein folding, permitting polymerization of intermediate which accumulates in hepatocyte ER • Failure of secretion results in peripheral deficiency ◦ Lack of protease inhibition primarily manifests as lung disease: early onset emphysema • Hepatocyte accumulation results in liver disease ◦ ◦ ◦ ◦ 2 Infantile cholestatic hepatitis - usually self-limiting, but progressive liver disease in minority Progressive liver fibrosis Cirrhosis Hepatocellular carcinoma ALN-AAT Therapeutic Hypothesis GalNAc3 ALN-AAT Z-AAT mRNA expression in hepatocytes Misfolded Z-AAT protein Reduced Z-AAT polymers aggregates in hepatocytes in hepatocytes forming polymers Suppression of hepatocyte Z-AAT protein production permits clearance of the accumulated abnormal protein from the liver, permitting stabilization and potentially reversal of liver disease 3 Reduced hepatocyte Z-AAT polymers cause damage hepatocyte damage Results in liver fibrosis and Decrease in liver fibrosis HCC and HCC ALN-AAT Phase 1/2 Study Design Part A: Single-Ascending Dose (SAD) │Randomized 3:1, Single-blind, Placebo-controlled Healthy adult volunteers Outcome evaluations: Safety and Pharmacodynamic Response (reduction in plasma AAT level) 0.1 mg/kg x 1 SC, N=4 0.3 mg/kg x 1 SC, N=4 1.0 mg/kg x 1 SC, N=4 3.0 mg/kg x 1 SC, N=4 6.0 mg/kg x 1 SC, N=4 Part B: Multiple-Ascending Dose (MAD) │ Randomized 4:2, Single-blind, Placebo-controlled 1.0 mg/kg, q28d ×4 SC, N=6 4 Clinicaltrials.gov identifierNCT02503683 Healthy adult volunteers Outcome evaluations: Safety and Pharmacodynamic Response (reduction in plasma AAT level) ALN-AAT Phase 1/2 Interim Study Results Demographics: Part A + B (Healthy Volunteers) 5 Demographic Results Number enrolled N=26 (ALN-AAT:Placebo = 19:7) Median Age 28 years (range: 18 - 60) Gender, n Female: 13 Males: 13 Race, n White / Caucasian: 13 African: 5 Asian: 3 Other: 5 ALN-AAT Phase 1/2 Interim Study Results Summary of Safety ALN-AAT was generally well-tolerated in Parts A and B of Study ALN-AAT-001 No drug-related serious adverse events (SAEs) or discontinuations due to adverse events (AEs) Part A: Total of 57 AEs reported in 5 placebo and 14 ALN-AAT subjects • 15 related or possibly related AEs were reported in 7 subjects ◦ Diarrhea, dyspnea (normal spirometry), nasopharyngitis, elevated ALT/AST, elevated CK, influenza, worsening allergy, headache, injection site bruise, injection site dysesthesia, abdominal pain • No injection site reactions were reported Part B: Total of 23 AEs reported in 2 placebo and 4 ALN-AAT subjects • 6 related or possibly related AEs were reported in 2 subjects* ◦ Nasopharyngitis, headache, injection site bruise, oropharyngeal pain, psoriasis, subacute spongiotic dermatitis • No injection site reactions were reported No clinically significant changes in vital signs or EKG 6 Data transfer: 30Jun2016 *One AE of ligament sprain with missing relatedness assessment is not included in this count ALN-AAT Phase 1/2 Interim Study Results Mean [± SEM] AAT Level Relative to Baseline Pharmacodynamics: Serum AAT Levels, Part A (Single Dose) 1.6 1.5 1.4 1.3 1.2 1.1 1.0 0.9 0.8 0.7 0.6 0.5 0.4 0.3 0.2 0.1 0.0 Placebo (N=5) 0.1 mg/kg (N=3) 0.3 mg/kg (N=3) 1.6 1.0 mg/kg (N=3) 3.0 mg/kg (N=3) 6.0 mg/kg (N=3) 1.4 1.3 1.2 1.1 1.0 0.9 0.8 0.7 0.6 0.5 0.4 0.3 0.2 0.1 0.0 0 20 40 60 80 100 120 140 160 180 200 Days since dose 6.0 mg/kg dose group • Max AAT knockdown (KD): 88.9% • Mean maximal KD: 83.9 ± 2.6% • Mean AAT KD at ~6 months: 75.0 ±1.2% 7 1.5 Data transfer: 30Jun2016 220 240 260 280 300 ALN-AAT Phase 1/2 Interim Study Results Pharmacodynamics: Serum AAT Levels, Part B (Multiple Doses) 1.4 Placebo (N=2) 1.3 1.0 mg/kg q28d ×4 (N=4) Mean [± SEM] AAT Level Relative to Baseline 1.2 1.1 1.0 0.9 0.8 0.7 0.6 0.5 0.4 0.3 0.2 0.1 0 20 40 60 80 100 120 140 160 180 Days since dose 8 Data transfer: 30Jun2016 200 220 240 260 280 300 ALN-AAT Phase 1/2 Interim Study Results Pharmacodynamics: Serum AAT Levels, Part A + B Mean [± SEM] AAT Level Relative to Baseline AAT Knockdown at 1mg/kg multidose comparable to 3 and 6 mg/kg single doses 1.5 1.5 1.4 1.3 1.2 1.1 1.0 0.9 0.8 0.7 0.6 0.5 0.4 0.3 0.2 0.1 0.0 0.7 0.6 0.5 0.4 0.3 0.2 0.1 0.0 0 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 Days since first dose Single Dose 3.0 mg/kg 9 Data transfer: 30Jun2016 Single Dose 6.0 mg/kg Multiple Doses 1.0 mg/kg q28d ×4 ALN-AAT Phase 1/2 Interim Study Results Pharmacodynamics: Dichotomous Pattern Explained by Target SNP AAT Values (mcg/mL) SNP confers a single base mismatch between drug and target Prevalence up to 30% in some populations SNP is not co-inherited with Z allele 3000 2800 2600 2400 2200 2000 1800 1600 1400 1200 1000 800 600 400 200 0 SNP Wild Type -10 10 30 50 70 90 110 130 150 170 190 210 230 250 270 290 310 Days since first dose Placebo 10 Placebo Data transfer: 30Jun2016 1.0 mg/kg 1.0 mg/kg 1.0 mg/kg 1.0 mg/kg ALN-AAT Phase 1/2 Interim Study Results Liver Transaminases, Part A Dose 8 Placebo 4 ALT AST N 5 1X ULN 1 8 3 4 0.1 mg/kg 0.3 mg/kg Amount X ULN 1 8 1.0 mg/kg 3 4 1 8 3 4 1 8 3.0 mg/kg 4 3 1 8 6.0 mg/kg 4 1 -10 11 Data transfer: 30Jun2016 3 0 10 20 30 40 50 60 70 Days Since Dose -10 0 10 20 30 40 50 60 70 Days Since Dose ALN-AAT Phase 1/2 Interim Study Results Liver Transaminases, Part B Placebo ALT AST Amount X ULN 8 4 1 1X ULN 1.0 mg/kg Amount X ULN 8 4 1 1X ULN Days Since First Dose 12 Data transfer: 30Jun2016 Days Since First Dose ALN-AAT Phase 1/2 Interim Study Results Summary and Next Steps ALN-AAT clinically well tolerated with single or multiple (4) doses Dose-dependent , potent and durable suppression of AAT was observed Diminution of PD effect in presence of SNP in target sequence demonstrates specificity of drug mechanism Asymptomatic, reversible, dose-dependent increase in hepatic transaminase observed Next Steps • Since the target patient population has established liver disease, plan to hold further development of this molecule • Identification of a 2nd generation molecule is in progress, CTA expected in 2017 13 Thank you 14
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