MASTER PROGRAMME BIOMEDICAL ENGINEERING Master Thesis Title: Simulation studies on positron emission tomography spatial resolution comparing monolithic and pixelated detectors Name: Verena Kettelhack Matr.-No: 311384 For the degree: Master of Science in Biomedical Engineering Institute of Experimental Molecular Imaging – Physics of Medical Imaging Systems Examiner(s): Prof. Volkmar Schulz Institute/Company: Town: Date: Aachen 02.03.2015 Simulation studies on positron emission tomography spatial resolution comparing monolithic and pixelated scintillation detectors submitted by Verena Kettelhack Master’s Thesis in Biomedical Engineering presented to Faculty of Medicine RWTH Aachen University in March 2015 issued at Institute of Experimental Molecular Imaging - Physics of Medical Imaging Systems supervised by Prof. Dr. Volkmar Schulz Statutory Declaration I, Verena Sophie Kettelhack, declare that I have developed and written the enclosed Master Thesis completely by myself, and have not used sources or means without declaration in the text. This thesis was not used in the same or in a similar version to achieve an academic grading or is being published elsewhere. Aachen, 03/02/1015 3 Acknowledgements First of all, I would like to express my gratitude for Prof. Volkmar Schulz who provided the opportunity for me to issue my Master’s thesis about this very interesting topic in his work group. Second, I would also like to thank Prof. Fabian Kießling for agreeing to be my second examiner. Especially, I want to thank Patrick Hallen for the best support and supervision any master student could hope for: thank you for all the time you invested in explaining, discussing and helping me with any problem I had along the way. Furthermore, I would like to thank the whole PMI group for making work very educational and once in a while a little amusing; thank you, too, for your support. Lisa, thank you for proof-reading my thesis in such a detailed and thoughtful manner, even though you did not have a lot of time. I really appreciate it. 5 Contents 1 Abstract 9 2 Introduction 2.1 11 Medical Imaging . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11 2.1.1 Anatomical and Structural Imaging . . . . . . . . . . . . . . . . . 11 2.1.2 Functional Imaging . . . . . . . . . . . . . . . . . . . . . . . . . . . 12 2.1.3 Multi-modal Imaging . . . . . . . . . . . . . . . . . . . . . . . . . . 13 3 Positron Emission Tomography 15 3.1 Physical Basics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15 3.2 Technical Fundamentals of PET Imaging . . . . . . . . . . . . . . . . . . . 17 3.3 3.4 3.2.1 Radiation Detectors . . . . . . . . . . . . . . . . . . . . . . . . . . 17 3.2.2 Photo-detectors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18 3.2.3 Data Processing . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19 Image Quality and Spatial Resolution . . . . . . . . . . . . . . . . . . . . 20 3.3.1 Positron Range and Acollinearity . . . . . . . . . . . . . . . . . . . 23 3.3.2 Energy Deposition and Detector Response . . . . . . . . . . . . . . 24 3.3.3 Depth of Interaction . . . . . . . . . . . . . . . . . . . . . . . . . . 26 Objective . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 27 4 Simulations 29 4.1 GATE - Geant4 Application for Tomographic Emission . . . . . . . . . . 29 4.2 PET Modality . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 29 4.3 Simulation Parameters . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 30 4.4 Simulation of Detector Response and DOI . . . . . . . . . . . . . . . . . . 30 4.5 Reconstruction Software . . . . . . . . . . . . . . . . . . . . . . . . . . . . 32 4.6 Data Preparation for Evaluation . . . . . . . . . . . . . . . . . . . . . . . 33 7 Contents 5 Results and Discussion 5.1 Ideal Detector Resolution . . . . . . . . . . . . . . . . . . . . . . . . . . . 35 5.1.1 5.2 35 Resolution in Different Scanner Directions . . . . . . . . . . . . . . 37 Performance Comparison under Realistic Conditions . . . . . . . . . . . . 39 5.2.1 Visual Separability of Two Point Sources . . . . . . . . . . . . . . 41 5.3 Positron Range and Acollinearity . . . . . . . . . . . . . . . . . . . . . . . 43 5.4 Influence of DOI Determination . . . . . . . . . . . . . . . . . . . . . . . . 45 5.5 Phantom Simulations . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46 5.6 Theoretical Determination of the Spatial Resolution . . . . . . . . . . . . 48 5.7 Influence of Reconstruction Software . . . . . . . . . . . . . . . . . . . . . 49 6 Conclusion 51 7 Outlook 53 8 1 Abstract In this thesis, simulation studies are conducted in order to estimate the spatial resolution of a positron emission tomography scanner with monolithic scintillators and to compare them to conventional pixelated scintillators. A theoretical system with detectors providing a perfect response would allow a spatial resolution of 0.6 mm. This resolution is only restricted by positron range and acollinearity and therefore marks the limit of possible spatial resolution with a specific scanner geometry and the applied image reconstruction software. In order to simulate the response of the monolithic-scintillator-based system, a realistic response on detector level needs to be modeled. For this purpose, an experimentally determined two-dimensional point-spread-function is used to smear the simulated interaction locations within the monolithic detector. To further provide a three-dimensional point-spread-function, depth-of-interaction determination with a realistic resolution is implemented. Under these conditions, a spatial resolution comparison between pixelated and monolithic detectors is performed. The pixelated scintillator provides a resolution of 0.78 mm and the monolithic scintillator one of 0.90 mm. Additionally, the influence of physical effects, such as positron range and acollinearity, are evaluated. Positron range and acollinearity combined degrade the spatial resolution by about 30 %. Due to not yet understood results of simulating a back-to-back source with an implemented angular deviation representing the acollinearity, these two effects could not be examined separately. Moreover, the influence of depth of interaction determination in monolithic scintillators is analyzed. Without depth-of-interaction determination, the system’s spatial resolution degrades by 18 % in the center and by 26 % at the edge of the field of view. The last very influential factor affecting the spatial resolution of a system is the image reconstruction software. The reconstruction software used is able to provide a 20 % resolution recovery for pixelated detectors and a 30 % one for monolithic detectors. 9 2 Introduction The importance of medical imaging becomes obvious in the daily routine of every hospital and it keeps increasing. Multiple different diseases show similar or even identical symptoms and the diagnosis can be very inconclusive. Medical imaging allows the view into the patient without risky diagnostic surgery and often provides either clear confirmation or disproof of a suspicion. Furthermore, pathological structures can be detected and identified even before the disease breaks out. 2.1 Medical Imaging The term medical imaging refers to multiple different technologies, which are able to generate a visual representation of the anatomical, structural or functional interior of a body. The different modalities can be roughly divided into two groups: anatomical and functional imaging modalities. Anatomical and structural information of the body is acquired with e.g. X-ray computer tomography (CT) or magnetic resonance tomography/ imaging (MRT/MRI). On the other hand, positron emission tomography (PET) and single photon emission computed tomography (SPECT) pertain to the group of functional imaging modalities. They can provide various functional information about e.g. biological processes or molecular characteristics of tissue. Naturally, there are other aspects that further subdivide the groups of modalities or even regroup them, but the provided distinction is fully sufficient for the following thesis. 2.1.1 Anatomical and Structural Imaging Radiography, the first imaging modality, became possible in 1895 due to Wilhelm Conrad Roentgen’s discovery of X-rays.1 The technology, which utilizes ionizing electromagnetic radiation in the range of up to 150 keV, is based on the passing of high energy photons trough the imaged object. Their attenuation depending on the density and atomic structure of the material is measured and depicted in different gray values. Since the Calcium complexes in bones have a relatively high atomic number, X-ray 1 J. T. Bushberg, “The essential physics of medical imaging,” p. 4. 11 2 Introduction imaging provides a very good contrast between bones and soft tissue; therefore, radiography is very applicable to bone fracture imaging. Another well-established application of radiography is mammography; it is used for the diagnosis of abnormal mammary tissue and therefore the early detection of breast cancer. The different tissues being examined in mammography have a similar density and therefore, a softer X-ray beam - about 30 keV - is needed to distinguish between the different structures.2 Since radiography only generates projection images, computer tomography is used to acquire three-dimensional images of the body. This technology was first available in the early 1970s. CT is implemented by rotating an X-ray source and the corresponding detector around the object and successively creating image slices. These slices are reconstructed with Fourier-transform-based reconstruction algorithms.3 Drawbacks of this technology are often based on the conflict between good image quality achieved by using a high radiation dose and minimizing said dose in order to reduce the resulting risk for the patient. Furthermore, other imaging modalities provide a much better soft tissue contrast and are therefore more applicable for soft tissue related examinations. MRI however, completely forgoes photon radiation by acquiring images with the measurement of magnetization, which depends on the proton density and relaxation times. A patient is placed in a static magnetic field of usually 1.5 - 3.0 T; then surrounding coils generate radio wave pulses, which flip the spins of the protons within the patient. When this excitation of the protons wears off, they emit the energy in form of radio waves, which are then detected by receiver coils and processed to visualize an image. MRI exhibits a very high spatial resolution of 0.1 - 1.0 mm depending on the field strength and a good soft tissue contrast.4 2.1.2 Functional Imaging MRI is a very versatile imaging modality and can also be used for acquiring some functional information; it is then referred to as functional magnetic resonance imaging (fMRI). FMRI can visualize for example hemodynamics in the brain or in the heart in order to recognize activity patterns in the tissue. However, its comparably low sensitivity can be a disadvantage in certain functional imaging applications. In general, functional imaging uses molecular tracers or biomarkers of different kinds: fMRI examining haemodynamics uses the ferromagnetic haemoglobin in erythrocytes to visualize 2 Johns and Yaffe, “X-ray characterisation of normal and neoplastic breast tissues.” J. T. Bushberg, “The essential physics of medical imaging,” p. 312 ff. 4 Ibid., p. 402 ff. 3 12 2.1 Medical Imaging their movement and therefore the blood flow in the tissue.5 In order to obtain a functional PET image, a positron-emitting tracer is intravenously injected. After a certain period of time depending on the molecular structure of the tracer, the tracer molecules accumulate in certain physiological structures, e.g. in tumor tissue or degenerative nervous tissue. Thus, the locations of interest can be located clearly by detecting the radioactive decay and resulting annihilation events. A widely used radioactive tracer is the glucose analogue [18 F]Fluorodesoxyglucose, which is very convenient for the visualisation of high metabolic activity e.g. in the brain or tumor tissue. A similar technique is used in SPECT imaging: a gamma-emitting tracer is injected into the patient’s radial vein and then visualized with coaxially set-up detectors. The differences between PET and SPECT are mainly marked by the necessity in SPECT to use collimators. Photons inciding with an angle other than 90◦ cannot be correctly reconstructed in SPECT. Therefore, they are cut off with a lead collimator. A typical tracer used is the metastable isotope 99m Tc; it can be coupled to sestamibi, a pharmaceutical agent used to examine myocardial perfusion or thyroid dysfunction.6 2.1.3 Multi-modal Imaging Since the various imaging modalities show very different advantages, a combination of them can allow for a broader and more profound patient treatment. For instance, it is possible to combine the functional PET imaging with structural X-ray CT imaging: Not only can tumorous tissue be localized using the functional PET information but the image can directly be fused with the corresponding anatomical information provided by the CT via software registration. The image fusion is facilitated due to the fact that in most combination scanners the CT as well as the PET scanner are set up coaxially with respect to the same scanner axis. Furthermore, a photon attenuation map can be generated from the CT data, since the X-ray radiation and the PET annihilation photons experience similar attenuation in the tissue. Another important advantage of multi-modal imaging is the shorter patient set-up and actual image acquisition time, which leads to a lower radiation dose and higher patient throughput. Since PET focusses on function and activity of soft tissue, it is a modality often used for oncological diagnostics or tissue perfusion studies. Despite of the good PET/CT performance, this combined system is still limited by the relatively low soft tissue contrast of the anatomical imaging device. One solution is the combination of a PET scanner 5 6 Friston et al., “Event-Related fMRI: Characterizing Differential Responses.” Bihl and Brummer, Südwestdeutsches PET-Zentrum Stuttgart, PET and SPECT. 13 2 Introduction with an MRI system, which leads to a better and more flexible soft tissue contrast and an easier and more precise registration between the two modalities. Furthermore, during the acquisition of images with this kind of combined system, only the radiotracer’s decay contributes to the radiation dose affecting the patient. Nonetheless, the construction of a PET/MRI system is more difficult than the one of a PET/CT scanner. The PET disturbs the homogeneity of the magnetic field generated by the MR coils, and the magnetic field affects the detectors and the electronics in the PET scanner. Figure 2.1: Comparison of brain scans with PET, CT and T2-weighted MRI and their respective fused images. [A. Boss and Stegger, “Hybrid PET/MRI of Intracranial Masses: Initial Experiences and Comparison to PET/CT”] Figure 2.1 shows an example of cranial images acquired with PET, MRI and CT. The PET image clearly shows the different activity patterns of the neural tissue in the brain on a color scale. CT and MRI show structural and anatomical information of the head. CT hardly distinguishes between the different soft tissue regions inside the brain but distinctly displays the cranium. MRI however, depicts the boundaries of the cerebral architecture. The center images show the advantage of bimodal image acquisition, since functional and anatomical information can be used complementary. 14 3 Positron Emission Tomography 3.1 Physical Basics Positron emission tomography, an imaging technique of nuclear medicine, is based on the detection of two coincident photons which result from the annihilation of an emitted positron with an atomic electron. The emission of a positron is called beta decay, which involves the conversion of a nuclear proton (p) into a neutron (n); the process results in the release of a positron (β + ), which is the antimatter conjugate of the electron, and a neutrino (ν).1 1 + 1p −−→ 10n + 01β + + ν The positron is initially emitted with a certain amount of kinetic energy, which can assume a continuous range of values. After the emission, the positron loses this energy by interacting with the surrounding matter. When the positron is effectively at rest, it combines with an electron to form a positronium and after about 10−7 s the conglomerate disintegrates. This annihilation process produces two photons with the energy of 511 keV each. Due to the conservation of energy this is the same amount of energy contained in the mass of the earlier positron and electron. Equation 3.1 assumes the positron and electron to be at rest with no residual energy. E = mc2 = 9.11 · 10−31 kg · (3 ∗ 108 )2 m s−1 = 8.210−14 J = 8.2 · 10−14 J = 511keV (3.1) J 1.6 · 10−19 eV The high-energy photons can transfer their energy to the matter they are passing. Certain different effects are possible, but a common result is the ionization or excitation of the material’s atoms. There are three main mechanisms of high-energy photon interaction with matter: 1 Turkington, “Introduction to PET Instrumentation.” 15 3 Positron Emission Tomography 1. Photo-electric effect 2. Compton effect 3. Pair production There are other mechanisms, but they are not of great relevance for PET imaging. Furthermore, pair production requires photons of twice the energy of one annihilation photon - 1022 keV - and will therefore not be discussed in detail. Figure 3.1: Normalized photon energy spectrum generated in a simulation without energy cut-off. Figure 3.1 shows a common photon energy spectrum with the general structures. The maximum peak (photo-peak) rises around 511 keV and its full width at half-maximum (FWHM) shows the fluctuations in the energy deposition of the otherwise mono-energetic annihilation photons. The fact that not only 511 keV photons can be detected, but rather a continuous spectrum of photons up to 511 keV, is due to the Compton effect (Compton region). A photon colliding with a particle is scattered and changes the direction of its path. If it is not scattered elastically, it loses kinetic energy and its wavelength increases. Due to momentum conservation, the energy lost in Compton scattering correlates with the deflection angle of the photon off its original path.2 The photons counted with energies higher than 511 keV result from simultaneous events. 2 Bailey et al., “PET Basic Science,” p. 23. 16 3.2 Technical Fundamentals of PET Imaging 3.2 Technical Fundamentals of PET Imaging Since gamma-radiation is very penetrating and cannot directly and easily be quantified, an energy conversion is necessary. The energy of the gamma-photon is converted into an electrical signal or charge, which is proportional to the total energy deposited by the incident radiation. This conversion can be conducted with a varying number of steps depending on the radiation detector used. 3.2.1 Radiation Detectors There are three main categories of radiation detectors: proportional gas chambers, semiconductor detectors, and scintillation detectors. The operating principle of a proportional chamber is the ionization of gas atoms by the infrequently interacting gamma-radiation. A strong electric field is applied and accelerates the electrons produced in the ionization. In turn, these collide with other neutral gas atoms producing secondary ionization, which leads to a cascade. This cascade is finally detected at the cathode and produces a signal proportional to the energy deposited by the radiation. In a semiconductor radiation detector the incident radiation excites and thereby frees the valence band electrons, so that an applied electric field will cause a charge flow through the detector. This charge flow is detected and converted into a signal.3 The most common radiation detector category used in PET is the scintillator, which consists of an inorganic crystal. The high-energy photon enters the scintillator crystal, where its energy is converted into optical photons by interaction with the crystal’s atomic electrons. The two dominating interactions are Compton scatter and photo-electric absorption; Compton scatter results in a scattered photon and a recoil electron, and photo-electric absorption produces a photo-electron. The resulting particles in turn interact with the crystal’s structure and elevate its atomic electrons to higher energy levels. These exited states transition into their ground states under the emission of optical photons. As visible light features much less energy than gamma-rays, one gammaray can give rise to about 2 - 46 optical photons per keV energy of the gamma-photon, depending on the scintillator material.4 State of the art PET scanners usually use partitioned scintillator crystals of a certain size, which make it somehow easy to identify the hit region, since the optical photons mostly propagate along the separated crystal. However, there can be gamma-photons 3 4 Ibid., p. 29. Ibid., p. 31. 17 3 Positron Emission Tomography which are scattered and redirected into another crystal; consequently, they trigger a scintillation event, which leads to a possible misidentification depending on the deposited amount of energy. Also, the pixelation limits the spatial resolution to the size of one pixel, since no smaller object can be represented with its actual size. In order to improve spatial resolution, the size of the discrete detector crystals needs to be decreased; however, the smaller their size is, the higher becomes the cost of production. Another possible detector geometry is the continuous, monolithic scintillator crystal. The optical light generated spreads isotropically throughout the crystal and generates a photon count pattern at the read-out surface. This pattern varies depending on the location of the scintillation event and is used to identify said location. In the case of a monolithic crystal, the spatial resolution is not only constrained by the geometric properties of the radiation detector but also by signal processing algorithms. 3.2.2 Photo-detectors The optical photons propagating within the scintillator crystal are then processed by photo-detectors, which finally convert the optical signal into an electrical one. There are different technological approaches for this conversion: first, there is the photo-multiplier tube (PMT), which is a reliable technique to amplify low light signals of scintillation light. It typically consists of an evacuated tube with a photo-cathode at the entrance window. Optical photons detach electrons in the cathode via the photo-electric effect, which are then accelerated by an electric field. On their path they strike dynodes detaching more electrons, which consequently leads to an amplification of about 106 of the electron signal. Finally, they hit an anode causing a voltage drop over a resistor: this voltage provides the measurable signal.5 The second conventional technology used is based on semiconductor-based photodiodes. The incident scintillation photons cause electron-hole pairs in the semiconducting material; then, the intrinsic voltage between the oppositely doted materials causes charges to flow, which in turn can be measured with an external circuit. A special type of photo-diode is the avalanche photo-diode (APD), which supplies an internal signal amplification through avalanche multiplication. The free charge carriers are accelerated by an additional electric field until they reach energies high enough to break free other electrons, causing a current amplification. This effect is called avalanche effect.6 Based on the use of APDs is the silicon photomultiplier (SiPM), a parallel-connected array of silicon APDs operated in Geiger-mode. In Geiger-mode, the external potential 5 6 Bailey et al., “PET Basic Science,” p. 32. Ibid., p. 33. 18 3.2 Technical Fundamentals of PET Imaging applied to the photo-diode is strong enough to amplify one electron-hole pair, produced by a single photon, to a maximum output voltage. The SiPMs provide an analogue signal, which can be converted into a digital one depending on the placement of a following analogue-to-digital-converter (ADC). If every single APD’s signal is directly digitized, the SiPM is called digital (dSiPM).7 Furthermore, there are different ways of coupling the scintillator crystals to the photodetectors. First, there is one-to-one coupling, where one single crystal is coupled to an individual photo-detector. The hit crystal can be clearly identified if scattered events are rejected. However, it is very difficult to realize in crystal sizes below 4x4 mm since very small photo-detectors are needed; instead, APDs can be used, as they can be manufactured in arrays. Despite the good performance of one-to-one coupling, its complexity of electronics and its costs limit their use, especially in pre-clinical systems. Another coupling method, which circumvents these problems, uses larger PMTs without the intrinsic ability to determine the interaction’s position. The PMTs are glued to the crystals via a light guide. A weighted positioning algorithm is used to reconstruct the position of interaction within the detector considering a weighted sum of the PMTs’ signals.8 3.2.3 Data Processing Figure 3.2: Schematic representation of different possible event detections. A: True coincidence. B: Random coincidence. C: Scattered coincidence. [Turkington, “Introduction to PET Instrumentation”] In order to locate the origin of the annihilation event and thus the distribution of the radio-tracer, a coincident photon pair has to be identified. However, to avoid the pairing 7 8 Dam et al., “A Comprehensive Model of the Response of Silicon Photomultipliers.” Bailey et al., “PET Basic Science,” p. 34. 19 3 Positron Emission Tomography of coinciding events not resulting from the same annihilation, certain restrictions have to be made: • Both events have to be detected within a certain time window, the coincidence window. • The reconstructed line of response (LOR) between the two events must lie in a certain angular range. • The deposited energy of the photons needs to range in the selected energy window.9 Nevertheless, true coincidences (figure 3.2 A) with a 180 ± 0.5◦ angle and identical timing are not the only events being detected. A so-called random coincidence (figure 3.2 B) results from the simultaneous annihilation of two positrons emitting four photons. Two opposing photons from different annihilation events are detected as one coincident event, and the other two photons are lost due to the criteria mentioned above. Figure 3.2 C shows a true coincidence, whose photon is scattered. If the deflection angle is still in a certain range, the two emitted photons will be recognized as one coincident event. However, the reconstructed LOR will lead to a deviation of the actual annihilation location. To avoid events which are strongly scattered in the object, energy cuts are set in order to filter events outside of the photo-peak.10 Further restrictions in the acquisition of the single events can be made. In order to decrease the probability of a false crystal identification in pixelated crystals caused by detector scatter, scatter rejection can be applied. 3.3 Image Quality and Spatial Resolution The image acquisition and processing quality of an imaging system in general can be quantitatively evaluated by using certain parameters. Signal-to-noise ratio (SNR) e.g. is one of them; in order for an object to be visible, its signal must be stronger than the image noise.11 Noise increases and consequently, SNR decreases, if more random coincidences are recorded or due to intrinsic detector noise. However, the focus of this thesis will be put on another parameter - the system’s spatial resolution. Spatial resolution describes the ability of the imaging system to display the smallest discernible details of an object. Nevertheless, it needs to be distinguished from the term image resolution, since image 9 Bailey et al., “PET Basic Science,” p. 41. Turkington, “Introduction to PET Instrumentation.” 11 Smith, “The Scientist and Engineer’s Guide to Digital Signal Processing.” 10 20 3.3 Image Quality and Spatial Resolution resolution only refers to the quality of the final image; it gives a measure of how many pixels, lines or dots are contained in a unit of length. The digitization settings that provide the actual output image determine the final image resolution.12 Normalized Activity 0.18 0.16 0.14 0.12 0.10 0.08 0.06 0.04 0.02 0.0030 32 34 36 38 40 42 44 46 40 42 44 46 Profile axis, x-direction /mm (a) Point source 0.12 Normalized Activity 0.10 0.08 0.06 0.04 0.02 0.0030 32 34 36 38 Profile axis, x-direction /mm (b) Two separable point sources Figure 3.3: Projection profiles of an image of a single point source (a) and two resolvable point sources (b). In PET scanner performance evaluation, the quantification of spatial resolution is often defined via the width of the peak at half the maximum (FWHM) and the full width tenth maximum (FWTM) of the reconstructed image line profile of either a gamma-photon 12 Gonzalez and Woods, “Digital Image Processing, Second Edition.” 21 3 Positron Emission Tomography beam or a positron-emitting point source. Since this measure is common practice, it will be used in this thesis. Another measure - usually applied in the field of chromatography - is the peak-valley ratio (PVR), which quantifies the separability of two peaks. Since the line profile of two point sources also creates two peaks, this is another measure that will be utilized in the further course of this thesis. For the detector and scanner design Figure 3.4: Model of various successive factors causing a degradation of the spatial resolution. [Stickel and Cherry, “High-resolution PET detector design: modelling components of intrinsic spatial resolution”] an entire chain of events degrading the spatial resolution by imposing an uncertainty on the positioning of annihilation events need to be considered. The first effects, positron range and acollinearity (figure 3.4 A, B), are of physical nature and are explained in section 3.3.1. The following two aspects, energy deposition and detector response (figure 3.4 C and D), directly correlate with the properties of the scintillator, namely crystal size in pixelated scintillators, general detector and scanner geometry, and material properties (Section 3.3.2).13 The influence of the first four points on the spatial resolution is explained and examined further in this thesis. However, the effect of different readout appliances and processing algorithms is neglected, since no optical simulations are conducted. Even though some of the response functions of the degrading factors do not follow a perfectly Gaussian distribution (positron range and detector response), all of the effects are added up quadratically in order to calculate the system’s spatial resolution. Therefore, the spatial resolution Γ in mm FWHM for a point source, which is located at radius r from the center of the detector ring, has been determined by Moses as:14 Γ = krecon · s (0.5 · d)2 + s2 + (0.0044 · R)2 + b2 + 12.5 · r r 2 + R2 2 (3.2) d describes the crystal width, s is the positron range, R is the detector ring radius, and k depends on the image reconstruction algorithm. The factor b represents the crystal decoding error factor and amounts to d/3 for optical decoding. Equation 3.2 considers the crystal width d and therefore refers to systems using discrete detector crystals.15 13 Stickel and Cherry, “High-resolution PET detector design: modelling components of intrinsic spatial resolution.” 14 Moses, “Fundamental limits of spatial resolution in PET.” 15 Ibid. 22 3.3 Image Quality and Spatial Resolution 3.3.1 Positron Range and Acollinearity Figure 3.5: Schematic representation of an annihilation process showing positron path, positron range and acollinearity. As mentioned previously, the annihilation does not take place immediately after the beta decay. The positron is emitted with a certain amount of kinetic energy, which causes it to travel a tortuous path until most of its energy is lost by Coulomb interactions with the surrounding matter. The distance between the location of the actual radioactive decay and the annihilation is called positron range.16 Table 3.1 shows that compared to other isotopes 18 F has the shortest positron range due to the smallest energy. The larger the positron range is, the higher the inaccuracy of the reconstructed location, which naturally leads to a degradation of spatial resolution. As shown by Derenzo (1979), the positron range follows a non-Gaussian distribution.17 Another effect which is caused by the positron’s residual momentum is the so-called acollinearity. For a positron at rest, the two gamma-photons are released back-to-back with an 180◦ angle, but the principle of momentum conservation causes an angular deviation. Since the momentum varies within a range, the angular deviation also takes on a certain range of values, which follow a Gaussian distribution.18 The deviation ranges in the order of v/c rad with v being the velocity of the atomic electron and c the speed of light. If the annihilation process takes place in water, the angular deviation is about 0.5◦ ; and since the human body consists of ca. 65 % water, this approximation is reasonably applicable.19 The effect of acollinearity 16 Badawi, “Aspects of Optimisation and Quantification in Three-Dimensional Positron Emission Tomography.” 17 Derenzo, “Precision measurement of annihilation point spread distributions for medically important positron emitters.” 18 Levin and Hoffman, “Calculation of positron range and its effect on the fundamental limit of positron emission tomography system spatial resolution.” 19 Steén and Uhlén, “Development of a Time-of-Flight and 3D Demonstration Set-up for PET.” 23 3 Positron Emission Tomography on spatial resolution increases with an extending diameter between opposing detectors with a factor of 0.0022 (equation 3.2). Table 3.1: Half life (t1/2 ), maximum positron energy and positron range (FWHM in H2 O) of different β + -emitting isotopes. [Cal-Gonzalez et al., “Positron range effects in high resolution 3D PET imaging”] Isotope t1/2 (min) Maximum positron kinetic energy (MeV) Mean positron range (mm) 11 C 20.3 0.96 1.03 13 N 10.0 1.19 1.32 15 O 2.0 1.70 2.01 18 F 109.8 0.64 0.64 68 Ga 68.0 1.89 2.24 82 Rb 1.3 3.15 4.29 3.3.2 Energy Deposition and Detector Response Events that occur from multiple interactions involving scatter within the crystal produce a blurred energy deposition, which in turn leads to a more inaccurate positioning of the event. The minimization of the spatial extent of the energy deposition distribution in the detector (figure 3.4 C) is the first aspect that can be influenced with the detector design. A slimmer distribution facilitates the localization of the interaction within the crystal. The detector response to an infinitesimally narrow gamma beam is described by a point-spread function (PSF); it describes the probability distribution of the difference vector between the true and the reconstructed positions of the gamma interaction. Ideally, the PSF of one scintillator crystal is represented by a uniform distribution with the width of one pixel. However, inter-crystal scatter and pixel identification uncertainty distort the probability function. Detectors with one-to-one-coupled read-out avoid these problems, since certain signals associated with scatter can be rejected and the pixel identification is very exact. Due to the limitations of one-to-one coupling explained in section 3.2.2, the light sharing configuration with a light guide can be used. In this case, light patterns are read out and scatter rejection can only be implemented with calibration data. The PSF describing the response of the whole scanner in the image 24 3.3 Image Quality and Spatial Resolution space converges to a Gaussian function, which results from the convolution of the single uniform distribution functions. For monolithic crystals, the PSF mainly depends on the detector geometry, its surface characteristics and, as for the pixelated detector, on the photo-detector, and the reconstruction algorithm. If a detector is assumed to respond perfectly, the PSF can be described as a Dirac impulse, which means that every interaction event can be located perfectly at the correct position. Figure 3.6: Experimentally determined point-spread-function of a monolithic LYSO scintillator crystal. [Maas et al., “Monolithic scintillator PET detectors with intrinsic depthof-interaction correction”] The realistic PSF in the xy-plane of a monolithic detector using a LYSO scintillator has been experimentally determined by Maas et al.20 In order to measure the PSF of a detector, a gamma-photon pencil beam is directed at the detector, and a lead collimator is used for creating a beam with a certain width. The detector response is recorded and subsequently corrected for the beam diameter. A slimmer PSF implies a better intrinsic detector resolution, which in turn contributes to a better spatial resolution of the complete system. 20 Maas et al., “Monolithic scintillator PET detectors with intrinsic depth-of-interaction correction.” 25 3 Positron Emission Tomography 3.3.3 Depth of Interaction Another desirable performance characteristics of a scintillator crystal is a high stopping power leading to a high scanner sensitivity. Sensitivity describes the ability of a system to detect coincident photons per activity. A high stopping power not only leads to a more efficient event detection but also reduces the gamma-photons’ propagation path inside the crystal. The interaction depth of a gamma-photon entering a scintillator is distributed exponentially with the attenuation coefficient µ depending on the material properties. LYSO-scintillators have an attenuation length µ of about 0.77 cm−1 .21 Ix = I0 · e−xµ (3.3) I0 represents the unattenuated photon beam intensity and Ix the intensity measured through a material of the thickness x.22 If the detector set-up does not allow the determination of the depth of interaction (DOI), the energy deposition of the gamma-photon gets projected onto the crystal surface. This does not affect the location determination if the incidence angle is orthogonal to the entrance surface; but as soon as the angle is oblique, a parallax error occurs. Figure 3.7 schematically explains this case.23 Figure 3.7: Schematic visualization of the parallax error occurring without DOI determination. [Bailey et al., “PET Basic Science”] 21 Standards and Technology, Physical Measurement Laboratory. Bailey et al., “PET Basic Science,” p. 26. 23 Ibid., p. 37. 22 26 3.4 Objective The parallax error causes further decrease of spatial resolution. One way to avoid it before the image reconstruction, is to reduce the depth of the crystals. España et al. presented a DigiPET system with sub-millimeter spatial resolution by using a monolithic crystal with only 2 mm depth.24 However, the sensitivity obtained in the performance evaluation of the DigiPET was about 0.3 % compared to the nanoScan PET/MRI system of Nagy et al., which provided 8 %.25 Hence, with varying crystal depth, there is always a compromise between a good system resolution and a high sensitivity. In order to solve this conflict between sensitivity and resolution caused by crystal depth, DOI determination can be implemented. This can be achieved by using monolithic scintillators, since the light pattern at the read-out surface is also affected be the interaction depth. 3.4 Objective In order to specify the objective of examining the characteristics of PET spatial resolution, different positron emission tomography scanners with different applications need to be clearly distinguished. First, there are clinical scanners used mainly in oncological diagnostics. They are utilized to diagnose and locate tumors and metastases in human patients. A gantry of a certain size is needed in order to fit a human patient inside, and a high sensitivity is advantageous to enable minimization of the radiation dose affecting the patient. However, spatial resolution is not such a critical factor due to the dimensions of a human body and the respective tumor size; a spatial resolution of 3 4 mm seems to meet the demands. Also, multi-modal imaging systems combining PET and CT or MRI compensate for mediocre spatial resolution. Nevertheless, most cancer types are much better treatable if they are detected early. Therefore, better early detection of small nodules and primary tumors or metastases is beneficial. Since much smaller structures are to be visualized, higher spatial resolution could be a supporting aspect. Second, there are preclinical scanners, which are used for oncological tumor studies mainly in small animals like mice and rats. Naturally, these animals grow much smaller tumors and the difficulty of detecting and distinguishing them from natural physiological spots with high activity increases. Thus, better image quality and spatial resolution are necessary to successfully conduct experiments. These preclinical scanners will lie in the focus of this thesis. Therefore, the aims of the conducted simulation studies are the quantification and comparison of spatial resolution provided by either scanners 24 S. Espana and Holen, “DigiPET: sub-millimeter spatial resolution small-animal PET imaging using thin monolithic scintillators.” 25 K. Nagy and Gulyás, “Performance Evaluation of the Small-Animal nanoScan PET/MRI System.” 27 3 Positron Emission Tomography with conventional pixelated or monolithic detector crystals. Additionally, the impact of different factors influencing the spatial resolution from the annihilation event up to the image reconstruction are to be evaluated (see figure 3.4). 28 4 Simulations 4.1 GATE - Geant4 Application for Tomographic Emission GATE is a simulation tool kit developed to numerically simulate scenarios in the field of nuclear medicine and radiotherapy. It is based on the Geant4 platform, which provides Monte-Carlo simulations of particles passing matter. GATE contains packages, which are tailored to the specific use of PET and SPECT, and therefore, is highly beneficial for designing new scanners, optimizing acquisition protocols and developing and evaluating image reconstruction algorithms. The scanner geometry is defined within the program, and physical values and simulation parameters can be adapted. 4.2 PET Modality Figure 4.1: Sketch of the scanner geometry with respective coordinate system. The preclinical scanner geometry used for the simulations is based on the Hyperion IID system.1 Ten single detection modules are mounted on a gantry and make up a PET ring 1 Weissler et al., “Design concept of world’s first preclinical PET/MR insert with fully digital silicon photomultiplier technology.” 29 4 Simulations with a diameter of 209.6 mm (smallest distance between two opposing detector surfaces) and an axial field of view of 30 mm per detector ring. One module is made up of six sensor stacks in a 2x3 arrangement. Each sensor stack contains 30x30 LYSO scintillator crystals, each with the dimension of 1x1x12 mm3 . Since no optical simulations are conducted, the processing units are neglected in the simulation. They consist of 4x4 Philips Digital Photon Counting DPC sensors, and in turn every DPC comprises 2x2 pixels consisting of 3200 single-photon avalanche photo diodes (SPAD).2 4.3 Simulation Parameters For the determination of the spatial resolution, an 18 F point source with no spatial expansion and an activity of 100 kBq is placed in the center of the detector. An attenuation sphere with a radius of 5 mm consisting of water is placed around the source; it enables the annihilation after a certain positron range and provides a physiologically comparable setting. The simulated time amounts to 120 s neglecting the half-life of the element. Furthermore, four simulation runs are conducted and their mean and the statistical uncertainty are determined and shown. 4.4 Simulation of Detector Response and DOI No optical simulations are conducted and therefore the simulated measurement stops at the gamma-photon’s absorption within the scintillator. In case of the pixelated detector, intrinsic detector scatter is considered in the simulation, and GATE provides the crystal’s ID, in which the weighted mean of multiple interactions takes place. For the monolithic detector crystal, local crystal coordinates of the first interaction without any further simulated detector scatter are documented. However, the uncertainty of localizing the gamma-photon’s absorption also needs to be taken into account. Therefore, the experimentally measured response to a pencil beam (Maas et al.3 ) is used to smear the exact crystal coordinates. For parametrization, the one-dimensional projection of the PSF (figure 4.2) is fitted with a bimodal Gaussian function (equation 4.1). Accordingly, the x- and y-coordinates are smeared individually with the same function. Its tails, which are broader than the ones of a regular Gaussian function, are ascribed mostly to detector scatter. The FWHM of the fitted PSF is 1.05 mm and its FWTM 2.2 mm.4 2 Wehner et al., “MR-compatibility assessment of the first preclinical PET-MRI insert equipped with digital silicon photomultipliers.” 3 Maas et al., “Monolithic scintillator PET detectors with intrinsic depth-of-interaction correction.” 4 Ibid. 30 4.4 Simulation of Detector Response and DOI Figure 4.2: Line profile of experimentally determined PSF [Maas et al., “Monolithic scintillator PET detectors with intrinsic depth-of-interaction correction”] 2 2 (x − µ1 ) (x − µ2 ) 1 1 exp − q exp − q +√ P SFmonolithic = √ 2σ1 π 2σ2 π 2σ 2 2σ 2 1 µ1 = −0.020, σ1 = 0.995, µ2 = −0.002, σ2 = 0.418 (4.1) 2 (4.2) µ is the mean and σ the standard deviation of the function. Unfortunately, no further information is given about the properties of the PSF varying with the location on the surface of the detector. Thus, the smear of the coordinates is assumed to be consistent over the entire area of the detector. This is not an entirely realistic assumption; however, it is sufficient and assumes the best case scenario. Furthermore, for the simulation of monolithic scintillator performance, a realistic depth of interaction determination is implemented. For that, the depth coordinate determined by GATE is smeared with a Gaussian function, which is defined by a given FWHM depending on the depth, whose values can be taken from figure 4.3. Even though a slightly adapted function, like the bimodal Gaussian function, is rather likely to define the DOI resolution, this approximation is satisfactory. The values used for the smearing were determined by Dam et al. and provide a weighted DOI resolution of 4.1 mm.5 5 Dam and Schaart, “A practical method for depth of interaction determination in monolithic scintillator PET detectors.” 31 4 Simulations 6 DOI resolution FWHM /mm 5 4 3 2 1 00 2 4 6 DOI /mm 8 10 12 Figure 4.3: DOI resolution for different depths in a 12 mm deep monolithic crystal. [Dam and Schaart, “A practical method for depth of interaction determination in monolithic scintillator PET detectors”] 4.5 Reconstruction Software The reconstruction software used to generate images from the pre-processed data deploys an iterative reconstruction algorithm; this algorithm approximates the solution of an inverse problem consisting of a set of linear equations:6 hpj i = P X aj,i fi j = 1, ..., NLOR (4.3) i=1 hpj i is the measured data, fi represents the estimated vector describing the image model, and aj,i describes the system matrix elements. The system matrix provides the system’s response to an input function. An important step in solving equation 4.3 is the approximation of said system matrix a. An approximation is used, since an exact calculation of the whole matrix is inhibited by its large size. The system’s geometry and characteristics are known and taken into account as well as the assumption that the system’s measurements are limited by a finite resolution. The precision the system matrix is approximated with is described by an adjustable parameter in the reconstruction. This parameter provides the number of samples that are randomly generated for the estimation of every system matrix element. The shape defining the distribution of 6 Bailey et al., “PET Basic Science,” p. 71. 32 4.6 Data Preparation for Evaluation the random samples differs depending on the scintillator geometry: for the pixelated detector, the shape is defined by a uniform probability density function with the width of one crystal, clearly restricting the possible range of the gamma-absorption. For a monolithic scintillator, the uncertainty is given by the PSF describing the detector response (equation 4.1). 4.6 Data Preparation for Evaluation Section 3.3 explains that FWHM and FWTM values are measured in the line profile of the image peak of a point source. As it is difficult to choose a representative and reproducible section for the line profile, not only single line profiles but rather projections of the field of view volume onto one axis are generated. FWHM and FWTM values are always taken from the one-dimensional projection profiles if not explicitly stated otherwise and are indicated with their respective uncertainties. 33 5 Results and Discussion 5.1 Ideal Detector Resolution In order to determine the physical limits of PET spatial resolution, the response of a scanner with ideal monolithic detectors is simulated, i.e. the detector response is described by a Dirac-PSF. For modeling the realistic detector response, the experimentally determined PSF in equation 4.1 is applied. The point source is located in the detector center and surrounded by an attenuation sphere of water (radius of 5 mm), which enables the annihilation of the positron with an electron. Table 5.1: FWHM and FWTM (with respective statistical uncertainies) of the spatial resolution of a scanner with monolithic detector crystals comparing an ideal and a realistic detector response. Ideal detector Scanner direction Realistic detector FWHM (mm) FWTM (mm) FWHM (mm) FWTM (mm) x 0.605 ± 0.001 1.090 ± 0.001 0.920 ± 0.002 1.702 ± 0.002 y 0.609 ± 0.002 1.090 ± 0.003 0.922 ± 0.003 1.705 ± 0.003 z 0.583 ± 0.001 0.993 ± 0.001 0.881 ± 0.004 1.648 ± 0.004 If a monolithic detector was designed to perfectly localize a gamma-photon interaction within the scintillator crystal, a spatial resolution of about 0.6 mm FWHM in x- and y-direction and 0.5 mm in z-direction could be achieved (table 5.1). In this case, only the physical effects, positron range and acollinearity, and the image reconstruction software influence the spatial resolution. Object scatter occurring in the attenuation sphere consisting of water can be neglected. Figure 5.1 shows a step-wise approximation of the spatial resolution limit and its dependence on the quality of the detector response. The same simulation data is smeared 35 5 Results and Discussion with different detector response FWHM values from 0.0 mm up to 1.2 mm. However, the probability density function, which is used to smear the data is a simple Gaussian function and not a bi-modal one. Therefore, the results at ca. 1.05 mm FWHM detector response are not completely compatible with the ones provided by a realistic detector with the empirical detector PSF. Spatial resolution FWHM /mm 0.85 0.80 0.75 FWHM x-direction FWHM y-direction FWHM z-direction 0.70 0.65 0.60 0.55 0.0 0.2 0.4 0.6 0.8 1.0 1.2 0.8 1.0 1.2 Detector resolution FWHM /mm Spatial resolution FWHM /mm 1.5 1.4 1.3 FWTM x-direction FWTM y-direction FWTM z-direction 1.2 1.1 1.0 0.9 0.0 0.2 0.4 0.6 Detector resolution FWTM /mm Figure 5.1: Dependency of the system’s spatial resolution (FWHM and FWTM) on the varying width of the detector response function. 36 5.1 Ideal Detector Resolution As the width of the detector response function tends to 0.0 mm, the spatial resolution of the whole system converges to its physical limits of about 0.6 mm. Enhancing the detector response from 1.0 mm to 0.6 mm could increase the spatial resolution by 0.12 mm (15 %). This could be beneficial depending on the actual effort and cost of improving the detector response. However, a further improvement of the detector response to less than a width of 0.6 mm does not pay off considering the increasingly smaller advancement of the spatial resolution. 5.1.1 Resolution in Different Scanner Directions It is unusual to achieve a better spatial resolution along the z-axis than the radial xand y-axis, even though this effect can be observed in all the provided results. When acquiring the activity of a point source in the center of the scanner, every LOR through the source without z-component (z = 0) meets the two opposing detector surfaces in an almost orthogonal angle with at most ±8.2◦ angular deviation; this leads to an interaction localization with almost no parallax error. The resolution along the z-axis however, is influenced by a stronger parallax error, since the LORs with a z-component (z 6= 0) meet the crystal surfaces with a deviation of up to ±24.7◦ (given a scanner length in z-direction of 96.6 mm). This mainly affects the pixelated detector due to the missing DOI determination. For the monolithic detector, the better z-resolution could be caused by a binning error from the voxel binning of the field of view in the image reconstruction. A voxel size of 0.25 mm is chosen and the reconstruction software sets the grid the image is reconstructed on. Since spatial resolutions of up to 0.6 mm are achieved, the location of the bins can affect the measured values substantially. To evaluate the possible binning error, the FWHM of a binned Gaussian function with variable starting points for the bins is measured and compared to its actual FWHM. Figure 5.2 shows the probability density of certain FWHM values caused by differing binning; the standard deviation of this distribution amounts to 0.011 mm. The following values will all be corrected for the binning bias 0.017 mm, which is the difference between the mean FWHM and the actual FWHM given by this distribution. The fact, that the binning is always equal for all the reconstructed measurements could explain the permanently deviating resolution in z-direction. However, the respective uncertainties provided with each value arise from the statistical fluctuations of the simulations. 37 5 Results and Discussion 700 600 Probability density 500 400 300 200 100 0 0.710 0.715 0.720 0.725 0.730 0.735 0.740 0.745 0.705 FWHM values /mm Figure 5.2: FWHM values of a binned Gaussian function (FWHM = 0.7 mm) with varying starting points for the binning. In order to further examine this hypothesis, another simulation is conducted, shifting a point source off-center in z-direction for z = 0.1 mm, a fraction of one voxel. The results in table 5.2 show the considerable effect of voxel binning, if the voxels are larger than a quarter of the FWHM-based resolution. Nevertheless, the image reconstruction computation time scales with the power of six (cubically with the number of voxels and additionally the need for a cubically increased statistic); in order to save computation time, these effects were accepted and regarded as systemic errors. 5.2 Performance Comparison under Realistic Conditions The performances of monolithic and pixelated detectors are simulated under realistic conditions and compared. Physical aspects, such as positron range and acollinearity, are simulated, and DOI determination is possible in the monolithic crystal. Signal readout effects, which occur due to light sharing in the pixelated scintillator are neglected since no optical simulations are conducted; the monolithic scintillator however, partially 38 5.2 Performance Comparison under Realistic Conditions Table 5.2: FWHM and FWTM (with respective statistical uncertainies) of the spatial response provided by monolithic detectors with a point source shiftet in z = 0.1 mm. Scanner direction FWHM (mm) FWTM (mm) x 0.905 ± 0.003 1.698 ± 0.003 y 0.895 ± 0.002 1.687 ± 0.002 z 0.887 ± 0.002 1.651 ± 0.002 considers signal read-out effects, since the experimentally determined PSF is used to smear the coordinates. Table 5.3: FWHM and FWTM (with respective statistical uncertainies) of the spatial resolution comparing monolithic to pixelated detector crystals. Pixelated Scanner direction Monolithic FWHM (mm) FWTM (mm) FWHM (mm) FWTM (mm) x 0.782 ± 0.004 2.351 ± 0.007 0.903 ± 0.002 1.685 ± 0.002 y 0.779 ± 0.007 2.292 ± 0.007 0.905 ± 0.003 1.688 ± 0.003 z 0.692 ± 0.006 2.241 ± 0.006 0.864 ± 0.004 1.631 ± 0.004 Comparing the spatial resolution performance of the different detectors shows clear results regarding the FWHM of the projection profile (table 5.3). The pixelated detector provides a better resolution of about 0.78 mm compared to the monolithic one, which achieves 0.90 mm. Interestingly, the FWTM values of the projection profiles follow the opposite trend. The pixelated detector shows an FWTM of about 2.35 mm and the monolithic detector one of 1.69 mm. In order to further examine these effects, the line profiles are compared. The line profile of the pixelated detector shows broader tails than the fitted Gaussian function, unlike the monolithic detector, whose line profile matches the fit quite well. One reason for this might be the differences in handling detector scatter. Using pixelated scintillator detectors with one-to-one coupling, the hit crystal is directly identified and detector scatter blurs the acquired information. As explained previously, there are 39 5 Results and Discussion different coupling methods in order to detect the optical photons, but as no optical simulations are conducted, the model resembles a one-to-one-coupled read-out. 1.2 1.0 Normalized activity Line profile Gaussian Fit 0.8 0.6 0.4 0.2 0.0 3 4 5 6 Profile axis, z-direction /mm 7 (a) Pixelated 1.2 1.0 Normalized activity Line profile Gaussian Fit 0.8 0.6 0.4 0.2 0.0 3 4 5 6 Profile axis, z-direction /mm 7 (b) Monolithic Figure 5.3: Line profiles of a point source and their Gaussian fits. In contrast, the complete monolithic-scintillator-based detector generates different light patterns depending on the interaction location. This detector response first needs to be calibrated, meaning a specific light pattern for each known location is recorded. In the actual data acquisition, these patterns are compared to the calibration data via 40 5.2 Performance Comparison under Realistic Conditions the k-nearest-neighbour classification algorithm.1 The most similar pattern is assumed to be most probable to represent the actual location. This method already provides an intrinsic detector scatter reconstruction, as detector scatter already affected the calibration patterns. Therefore, this could be the reason the resulting line profile provided by the monolithic detector does not display the broad tails caused by detector scatter. 5.2.1 Visual Separability of Two Point Sources The following measurements ought to provide a different perspective on the term resolution. The two peaks appearing in the projection profiles are considered visually separable, if at least two data points lie in the valley between the two peaks. The separability of two point sources around the center of the scanner is evaluated in all three scanner directions. The resolution provided by the system with pixelated detectors - the two sources were separable at 0.9 mm - sufficiently correlates with the determined FWHM values of the single source image (0.8 mm). The scanner with monolithic detectors however, only resolves two point sources at a distance of 1.2 mm instead of 0.9 mm as it is expected regarding the FWHM of the single point source. This effect leads to the assumption that a single point source does not necessarily provide a precise measure for the spatial resolution of a PET system. Table 5.4: Comparison of the peak-to-valley ratios at the same distance 1.2 mm of the two point sources using pixelated and monolithic detectors. Pixelated Monolithic Peak-valleyratio Peak-valleyratio x 1.731 ± 0.012 1.195 ± 0.045 y 1.893 ± 0.018 1.124 ± 0.016 z 2.396 ± 0.016 1.229 ± 0.051 Scanner direction In order to further compare the peak-to-valley ratios, the values at equal distance 1.2 mm are shown in table 5.4. The system with the pixelated detectors shows a higher peak-to-valley ratio than the one with the monolithic detectors. This correlates with the results about the separable distances. 1 Dam and Schaart, “A practical method for depth of interaction determination in monolithic scintillator PET detectors.” 41 5 Results and Discussion 8 7 Peak-to-valley ratio pixelated monolithic 6 5 4 3 2 1 0.8 1.0 1.2 1.4 1.6 1.8 Source distance in x-direction /mm 2.0 8 7 Peak-to-valley ratio pixelated monolithic 6 5 4 3 2 1 0.8 1.0 1.2 1.4 1.6 1.8 Source distance in y-direction /mm 2.0 8 7 Peak-to-valley ratio pixelated monolithic 6 5 4 3 2 1 0.8 1.0 1.2 1.4 1.6 1.8 Source distance in z-direction /mm 2.0 Figure 5.4: Peak-to-valley ratios as a measure of the scanner’s ability to resolve two point sources depending on the sources’ distance, comparing pixelated and 42 monolithic detectors. 5.3 Positron Range and Acollinearity Regarding the developing separability of the two different detector kinds however, a trend emerges. The previously explained effect of detector scatter causing broader tails in the line profiles of the pixelated detectors is represented in the peak-to-valley ratios of two sources with varying distances. Starting from a source distance of 2 mm, the monolithic detector is able to separate the peaks more clearly in x- and z-direction than the pixelated detector, despite its worse resolution limit. Interestingly, the trend of the comparison in y-direction strongly deviates from the other two directions; unfortunately this phenomenon can currently not be explained. It could be conclusively assumed, that the separability of two point sources gives a realistic measure of the spatial resolution of a system, but the peak-to-valley ratio loses its validity when the sources are farther apart. 5.3 Positron Range and Acollinearity In order to examine positron range and acollinearity in a system with realistic detectors, they are completely omitted in the simulations by introducing a perfect back-to-back gamma-ray-emitting source in the scanner center. The isolated influence of these physical effects on the spatial resolution has been shown in table 5.1, where a perfect interaction localization in the detector is given. Table 5.5: FWHM and FWTM (with respective statistical uncertainies) of the spatial response with perfect 180◦ γ-rays comparing pixelated and monolithic detectors. Pixelated Scanner direction Monolithic FWHM (mm) FWTM (mm) FWHM (mm) FWTM (mm) x 0.540 ± 0.001 1.107 ± 0.001 0.697 ± 0.001 1.227 ± 0.001 y 0.537 ± 0.001 1.167 ± 0.001 0.704 ± 0.002 1.235 ± 0.002 z 0.432 ± 0.002 0.854 ± 0.002 0.675 ± 0.003 1.168 ± 0.003 The simulated scanner with a perfect gamma-ray-emitting source provides a spatial resolution of about 0.54 mm for the pixelated detectors and 0.70 mm for the monolithic detectors. In case of the pixelated detector, the resolution is about 0.24 mm better than the one provided under realistic conditions and for the monolithic detector, the value is similar (compare to table 5.3). This leads to the conclusion that positron range and acollinearity altogether lead to a degradation of the spatial resolution of about 30 - 40% 43 5 Results and Discussion for the investigated scanner. In order to individually examine these two effects, a gamma-ray-emitting point source is simulated with an angular deviation representing realistic acollinearity. In order to simulate acollinearity, the direction of the emitted gamma-rays is smeared by a Gaussian with an FWHM of 0.58◦ by the GATE simulation. Table 5.6: FWHM and FWTM (with respective statistical uncertainies) of the spatial response of the pixelated and monolithic scintillator with back-to-back γrays with a Gaussian 0.58◦ FWHM acollinearity distribution neglecting the positron range. Pixelated Scanner direction Monolithic FWHM (mm) FWTM (mm) FWHM (mm) FWTM (mm) x 0.797 ± 0.002 2.120 ± 0.002 0.878 ± 0.004 1.612 ± 0.004 y 0.772 ± 0.003 2.042 ± 0.003 0.888 ± 0.003 1.632 ± 0.003 z 0.496 ± 0.003 1.104 ± 0.003 0.695 ± 0.002 1.695 ± 0.002 As shown in table 5.6, completely neglecting the positron range gives a spatial resolution comparable to the one given by the simulation of a regular beta-emitting point source leading to the conclusion that acollinearity is the more dominating effect. This seems unexpected since the simulations are based on a preclinical system and the influence of acollinearity increases with a larger scanner radius. In contrast, the mean positron range of 18 F taken from literature is 0.64 mm.2 Regarding the empirical res- olution formula 3.2, the positron range of an isotope ought to have a stronger effect, or frankly any effect at all, on the spatial resolution.3 A reason for this might be an unrealistic simulation of the positron range in GATE. However, it needs to be considered that a variety of theoretical values for the positron range of 18 F are denoted in literature. One possible reason for this deviation from the expected values could be an erroneously assumed positron range. Furthermore, a discrepancy in the resolution only in z-direction is very unlikely due to the fact that acollinearity and positron range are isotropic phenomena. Another possible reason for this discrepancy could be an unidentified filtering process in the image reconstruction software, which drowns out these smaller effects. 2 3 Cal-Gonzalez et al., “Positron range effects in high resolution 3D PET imaging.” Moses, “Fundamental limits of spatial resolution in PET.” 44 5.4 Influence of DOI Determination 5.4 Influence of DOI Determination The simulation of a scanner with monolithic scintillators assumes that a determination of the depth of interaction of the incident gamma-photon is possible with a resolution shown in figure 4.3. The performance of monolithic detectors with and without DOI determination is compared. Table 5.7: FWHM and FWTM (with respective statistical uncertainies) of systems with monolithic scintillators, with and without DOI determination. Monolithic with DOI Scanner direction Monolithic without DOI FWHM (mm) FWTM (mm) FWHM (mm) FWTM (mm) x 0.903 ± 0.002 1.695 ± 0.002 1.074 ± 0.004 2.117 ± 0.004 y 0.905 ± 0.003 1.698 ± 0.003 1.060 ± 0.004 2.104 ± 0.004 z 0.864 ± 0.004 1.631 ± 0.004 1.078 ± 0.007 2.443 ± 0.007 As presumed, the spatial resolution provided by the monolithic detectors deteriorates by about 18 % without any DOI correction. Also, the degrading resolution in z-direction fulfills the expectations, which is explained in section 5.1.1. The fact that the effect in z-direction is not more apparent could be caused by the previously explained binning error. Table 5.8: FWHM and FWTM (with respective statistical uncertainies) at the edge of the FOV (at z = 38 mm) provided by the monolithic scintillator, both with and without DOI determination Monolithic with DOI Scanner direction Monolithic without DOI FWHM (mm) FWTM (mm) FWHM (mm) FWTM (mm) x 0.911 ± 0.007 1.724 ± 0.007 1.155 ± 0.004 2.589 ± 0.004 y 0.908 ± 0.003 1.707 ± 0.003 1.241 ± 0.020 2.543 ± 0.020 z 0.878 ± 0.006 1.632 ± 0.006 0.909 ± 0.007 2.502 ± 0.007 45 5 Results and Discussion The effect of resolution degradation is also simulated at the edge of the field of view. As expected, the resolution without DOI determination at the edge of the FOV is impaired by about 26 %. This effect is caused by the greater parallax error. Interestingly, the resolution of the system with DOI determination is able to compensate this parallax error and shows almost no resolution degradation. 5.5 Phantom Simulations The measurement of FWHM and FWTM of a point source peak is a very simplified method to determine spatial resolution. To get a visual impression of the image quality, it is sensible to scan or simulate a phantom. The phantom consists of spherical sources, each with a different diameter. The sources’ activity density is kept constant in order to simulate hot spots with high activity next to smaller structures. The point sources each have an activity of 100 kBq and the sources with spatial extent have 2985 kBq /mm3 . The images acquired with monolithic and pixelated scintillators are compared. In order to get a quantitative statement, the peak-to-valley ratios are determined for each of the different diameter regions. Figure 5.5: Sketch of a structure phantom, which consists of spherical sources with different diameters and point sources. Figures 5.7 (a) and (c) show the line profiles of the image through the x-axis of the scanner, the spheres of the diameter 2.41 mm on the left and the point sources on the right 46 5.5 Phantom Simulations (a) Monolithic, transversal (b) Monolithic, coronal (c) Monolithic, sagittal (d) Pixelated, transversal (e) Pixelated, coronal (f) Pixelated, sagittal Figure 5.6: Image of a structure phantom viewed in different planes, (a)-(c) acquired with monolithic detectors and (d)-(f) with pixelated detector, all based on an averaged gray scale. side. Comparing the results of the pixelated with the ones of the monolithic detector, a slight difference in separability is visible. The monolithic detector is able to separate the peaks more clearly, which can be confirmed quantitatively by the disposition of the peak-to-valley ratios. For the 2.41 mm-sources, the monolithic peak-to-valley ratio is about factor 10, and for the point sources about factor 3 higher than the pixelated one. As previously explained, this effect could result from the difference in handling detector scatter, leading to slimmer tails in the line profiles. Comparing figures 5.7 (b) and (d), the line profiles though the y-axis and their respective peak-valley ratios do not show a clear disposition. Neither the pixelated detector nor the monolithic detector are able to better separate the peaks representing the sources. Nevertheless, it is important to consider the cleanness of the entire simulation setting; this means, object scatter is almost non-existent leading to very low noise levels, which are not realistically comparable to normal scanner features. The sources in a realistic phantom are normally embedded in 47 5 Results and Discussion plastic surroundings to fixate them, which causes much more object scatter than a water sphere. In regard of these aspects, not the absolute peak-to-valley ratios are considered but rather the tendencies. 1400 3000 1200 2500 Activity, a.u. 3500 Activity, a.u. 1600 1000 2000 800 1500 600 400 1000 200 500 00 5 10 15 20 25 30 Profile axis, x-direction /mm 35 00 40 (a) Pixelated, x-direction 15 20 25 30 35 40 35 40 1600 1400 800 1200 Activity, a.u. Activity, a.u. 10 Profile axis, y-direction /mm (b) Pixelated, y-direction 1000 1000 600 400 800 600 400 200 00 5 200 5 10 15 20 25 30 Profile axis, x-direction /mm (c) Monolithic, x-direction 35 40 00 5 10 15 20 25 30 Profile axis, y-direction /mm (d) Monolithic, y-direction Figure 5.7: Line profiles of the phantom image through the x- and the y- axis of the scanner (average of the four simulation runs). 5.6 Theoretical Determination of the Spatial Resolution As introduced previously, equation 3.2 gives an estimation of the spatial resolution of a PET scanner. This equation is mentioned in literature repeatedly, but it is partially based on empirical assumptions, e.g. the factor 0.5 scaling the pixel width d of the detector. The theoretical detector response of a pixelated detector has been explained in section 3.3.2. The variance V of a uniform distribution with the boundaries a and b 48 5.7 Influence of Reconstruction Software √ amounts to (b − a)2 /12 and accordingly, its standard deviation to σ = (b − a)/ 12. For a pixelated detector, b − a is equal to its width d. The quadratically added summands are given as FWHM values. Consequentially, the scaling factor of d should rather be chosen as: √ 2.35 2 2 ln 2 · σ = √ = 0.68 12 (5.1) In the further course of the discussion, the equation to approximate the spatial resolution Γ of a PET system is given by: Γpixelated = krecon,pix · q (0.68 · d)2 + s2 + (0.0044 · R)2 (5.2) Additionally, this formula ought to be customized for the use of monolithic scintillators since its application is currently limited to the use of pixelated-scintillator-based detectors. For the monolithic scintillator, the FWHM of its PSF is implemented as contribution of the detector: Γmonolithic = krecon,mono · q (FWHMPSF )2 + s2 + (0.0044 · R)2 (5.3) 5.7 Influence of Reconstruction Software Equations 5.2 and 5.3 give an estimation of the spatial resolution taking into account the performance of the reconstruction software (rrecon ). Different sources and simulation settings are considered and the respective rrecon is determined by comparing the measured FWHM and the expected FWHM, the latter without being affected by reconstruction. Unfortunately, the consideration of the dissociated impact of positron range and acollinearity has to be omitted due to not yet understood results shown in table 5.6. Table 5.9: Reconstruction factor krecon for different simulation settings determined with equation 3.2 for pixelated and monolithic detectors. Detector type Simulation and source properties Measured FWHM (mm) Expected FWHM (mm) krecon Pixelated Realistic 0.78 1.04 0.75 Pixelated Back-to-back 0.54 0.68 0.82 Monolithic Realistic 0.90 1.31 0.69 Monolithic Back-to-back 0.70 1.05 0.67 Monolithic Ideal detector 0.60 0.788 0.76 49 5 Results and Discussion The image reconstruction software for the pixelated-scintillator-based scanner shows an average krecon,pix of 0.795 ± 0.025. This means the software provides a so-called resolution recovery of about 20 % from the estimated value to the measured one. For the monolithic-scintillator-based scanner, a krecon,mono of 0.713 ± 0.024 is determined and hence a resolution recovery of almost 30 %. Due to the very small amount of data, these values have to be treated with caution. For both, simulations with pixelated and monolithic detectors, in principle equal approaches are used to reconstruct the images from the acquired data. Still, the simulations of the two different detectors, both based on different scintillator geometries, record different data and thus, two slightly varying versions of the reconstruction software need to be applied. The one version reconstructing monolithic data takes into account the probability of falsely localized interactions within the crystal. This probability is given by the true detector response (the PSF) of the monolithic detector and is implemented into the approximation of the system’s matrix. In contrast, the version reconstructing the pixelated data receives and processes discrete crystal IDs for each interaction. The software does not incorporate any information about the probability of falsely identified crystals. The calculation of the system matrix only takes into account the possible range within the one determined crystal in order to avoid binning artefacts. Therefore, the data processing during the image reconstruction of the monolithic detector provides a more realistic model than the reconstruction of the data from the pixelated detector. Hence, this might lead to a better image reconstruction and a stronger resolution recovery. Conclusively, an implementation of scatter reconstruction into the software reconstructing the pixelated data could be beneficial for further improving the spatial resolution. 50 6 Conclusion In this thesis, simulation studies are conducted in order to estimate the spatial resolution of a positron emission tomography scanner with monolithic scintillators and to compare them to conventional pixelated scintillators. A theoretical system with detectors providing a perfect response would have a spatial resolution of 0.6 mm. In this case, the resolution is only restricted by positron range and acollinearity and therefore marks the limit of possible spatial resolution with the specific scanner geometry and the applied image reconstruction software. In order to simulate the response of the monolithic-scintillator-based system, a realistic response on detector level needs to be modeled. For this purpose, an experimentally determined PSF is used to smear the simulated interaction locations within the monolithic detector. To further provide a three-dimensional PSF, DOI determination with a realistic resolution is implemented. Under these conditions, a realistic resolution comparison between pixelated and monolithic detectors is performed. The pixelated scintillator provides a resolution of 0.78 mm and the monolithic scintillator 0.90 mm. Regarding the modelling of the monolithic detector’s response, it needs to be kept in mind, that the implemented PSF only describes the response on the surface center of the scintillator crystal. This is an optimistic approximation, since the detector response most likely deviates at the margin of the crystal. Additionally, the influence of physical effects, such as positron range and acollinearity, are evaluated. Positron range and acollinearity combined degrade the spatial resolution by about 30 %. Unfortunately, these two effects could not be examined separately due to questionable results simulating a back-to-back source with an implemented angular deviation representing the acollinearity. Moreover, the influence of DOI determination in monolithic scintillators is analyzed. Without DOI determination, the system’s spatial resolution degrades by 18 % in the center and by 26 % at the edge of the FOV, which is caused by a greater parallax error. Interestingly, the implemented DOI determination is able to almost entirely compensate for this effect at the edge of the FOV. The last very influential factor affecting the spatial resolution of a PET system is the image reconstruction software. The reconstruction software used is able to provide 51 6 Conclusion a 20 % resolution recovery for pixelated detectors and a 30 % recovery for monolithic detectors. Consequently, a realistic comparison of the mere detector performance is difficult, since effects caused by the detector are not easily distinguishable from effects caused by the reconstruction software. However, the simulation results of a scanner based on monolithic scintillators serve well as an approximation for possible spatial resolution. With respect to all results, we could draw the conclusion that the effort of calibrating the monolithic detectors is not worthwhile regarding the spatial resolution of the system. Pixelated detectors with a pixel size of 1 mm provide a better resolution and improving the image reconstruction would probably be more beneficial. 52 7 Outlook As previously described, the simulations in this thesis are conducted with approximated models. Even though they provide quite realistic results in most cases, the models could be further refined. For the detector response of the monolithic scintillator, a locationdependent PSF could be implemented for smearing the coordinates in order to include the deviating response at the crystal margin. Concerning the actual read-out of the light patterns formed in the monolithic scintillator, there is also still room for improvement: the detector response currently degrades the spatial resolution by 0.32 mm (about 35 %). Moreover, the PSF of a pixelated detector including detector scatter and crystal identification errors could be experimentally determined. Even though these effects are partially simulated by GATE, they are not incorporated into the image reconstruction. Using the PSF to determine a more realistic approximation of the system’s matrix could obliterate the discrepancy between the performance of the reconstruction software versions for pixelated and monolithic detectors. This would potentially lead to a greater resolution recovery during the image reconstruction. Furthermore, a more realistic simulation of the pixelated detectors could be provided, which would also allow a better performance comparison between the two different detector types. 53 Abbreviations ADC Analogue-to-digital converter APD Avalanche photo-diode CT Computed tomography DOI Depth of interaction DPC Digital photon counter FOV Field of view fMRI Functional magnetic resonance imaging FWHM Full width half maximum FWTM Full width tenth maximum LOR Line of response MRI Magnetic resonance imaging MRT Magnetic resonance tomography PET Positron emission tomography PMT Photo-multiplier tube PSF Point-spread-function PVR Peak-to-valley ratio SiPM Silicon photo-multiplier SNR Signal-to-noise ratio SPAD Single-photon avalanche diode SPECT Single photon emission computed tomography 55 List of Figures 2.1 Comparison of brain scans with PET, CT and T2-weighted MRI and their respective fused images. [A. Boss and Stegger, “Hybrid PET/MRI of Intracranial Masses: Initial Experiences and Comparison to PET/CT”] 3.1 . . . . . . . . . . . . . . 14 Normalized photon energy spectrum generated in a simulation without energy cut-off. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16 3.2 Schematic representation of different possible event detections. A: True coincidence. B: Random coincidence. C: Scattered coincidence. [Turkington, “Introduction to PET Instrumentation”] 3.3 . . . . . . . . . . . . . . . . . . . . 19 Projection profiles of an image of a single point source and two resolvable point sources. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 21 3.4 Model of various successive factors causing a degradation of the spatial resolution. [Stickel and Cherry, “High-resolution PET detector design: modelling components of intrinsic spatial resolution”] 3.5 . . . . . . . . . . . . . . . . . . . . . 22 Schematic representation of an annihilation process showing positron path, positron range and acollinearity. . . . . . . . . . . . . . . . . . . . . . . . 23 3.6 Experimentally determined point-spread function of a monolithic LYSO scintillator crystal. [Maas et al., “Monolithic scintillator PET detectors with intrinsic depth-of-interaction correction”] 3.7 . . . . . . . . . . . . . . . . . . . . . . . . . 25 Schematic visualization of the parallax error occurring without DOI determination. [Bailey et al., “PET Basic Science”] . . . . . . . . . . . . . . . . . 26 4.1 Sketch of scanner geometry with coordinate system. . . . . . . . . . . . . 29 4.2 Line profile of experimentally determined PSF [Maas et al., “Monolithic scintillator PET detectors with intrinsic depth-of-interaction correction”] 4.3 . . . . . . . . . 31 DOI resolution for different depths in a 12 mm deep monolithic crystal. [Dam and Schaart, “A practical method for depth of interaction determination in monolithic scintillator PET detectors”] . . . . . . . . . . . . . . . . . . . . . . . . . . 32 57 List of Figures 5.1 Dependency of the system’s spatial resolution (FWHM and FWTM) on the varying width of the detector response function. . . . . . . . . . . . . 36 5.2 FWHM values of a binned Gaussian function (FWHM = 0.7 mm) with varying starting points for the binning. . . . . . . . . . . . . . . . . . . . . 38 5.3 Line profiles of a point source and their Gaussian fits. . . . . . . . . . . . 40 5.4 Peak-to-valley ratios as a measure of the scanner’s ability to resolve two point sources depending on the sources’ distance, comparing pixelated and monolithic detectors. . . . . . . . . . . . . . . . . . . . . . . . . . . . 42 5.5 Sketch of a structure phantom, which consists of spherical sources with different diameters and point sources. . . . . . . . . . . . . . . . . . . . . 46 5.6 Image of a structure phantom viewed in different planes, (a)-(c) acquired with monolithic detectors and (d)-(f) with pixelated detector, all based on an averaged gray scale. . . . . . . . . . . . . . . . . . . . . . . . . . . . 47 5.7 Line profiles of the phantom through the x- and the y- axis of the scanner (average of the four simulation runs). . . . . . . . . . . . . . . . . . . . . . 48 58 Bibliography A. 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