Indian Journal of Experimental Biology Vol. 39, October 200 1 , pp. 962-983 Review Article Leprosy bacillus - possibly the first chemoautotrophic human pathogen cultivated in vitro and characterised l A N Chakrabarty, Sujata G Dastidar*, Aninda Sen, Parthajit Banerjee & Raktim Roy* Department of Medical Microbiology and Parasitology, Calcutta University College of Medicine, Calcutta 700020, India Fax: 248-6604/1620; email: [email protected] *Division of Microbiology, Department of Pharmaceutical Technology, Jadavpur University, Calcutta 700032, India Leprosy bacillus (LB) and leprosy derived in vitro culture forms, the chemoautotrophic nocardioform (CAN) bacteria, showed an extremely close homology and identity with each other as regards a chemoautotrophic nutritional pattern, a no cardioform morphology, a weak acid-fastness coupled with Gram and Gomori's stain positivity, an exclusive mycolate and lipid profile, a phenolic glycolipid (PGL-I) and a highly sequestrated DNA characteristic, namely, a unique small size, a low GtC % mole, an exceptionally high y and UV radiation resistance, and a high thermal resistance. LB/CAN bacteria (CANb) gave positive signals for 36 kDa protein PCR, as well as, for 65 kDa epitope, and hybridisation with two or more probes and also by RFLP-analysis. Both LB/and CAN bacteria exhibited bacillary multiplication in the mouse footpads (MFP), nerve infiltration and evidences for local pathogenicity associated with pronounced systernic invasion. A highly reproducible mu tilation model could be established which enabled a successful application of the postulates of Koch. The proof of their total identity was their anergic reactions in LL cases counterpoised against Mitsuda type strong nodular responses, mirroring the reactions of leprosy bacilli in IT cases, in accordance with the dictum of XIth International Leprosy Congress ( 1 978). Thus, the chemoautotrophic nutritional requirements of LB, entirely unsuspected for a medically important pathogenic bacterium, having dimorphic (both bacillary and mycelial) characters with spores, mycelia and granules and unique pathogenicity of multilation manifested through the virulence factor, the enzyme collagenase, made LB or M leprae the highly enigmatic bacterium for so long. Since the discovery of leprosy bacillus (LB) as the causative agent of leprosy in 1 873, all attempts to cultivate it in vitro have proved unsuccessful. In view of this, the International Leprosy Congress held in 1978 concluded that, there is no proof that a genuine leprosy bacillus has been obtained. Thus, it had re mained a general belief, though disappointingly, that leprosy bacillus had not been cultivated in vitro so far l . However, progress in other fields of microbiology had led to magnificent discoveries of many newer types of bacteria, viruses, viroids, prions etc, as well as, understanding of genetic codes, synthesis of pro teins, discovery of enzymes and metabolic pathways. In this background, failure to cultivate the leprosy bacillus by discovering the mysteries of its nutritional pathways, had doubtless become an exciting but also challenging task for scientists. Ever since the discovery of causative agent of lep rosy by Hansen2 , attempts had been made to cultivate it in vitro, and try to establish its pathogenic role in compliance with the postulates of Koch3• Excellent I present address - Department of Microbiology, Calcutta Medical College, Calcutta 70007 3, India records of such attempts are provided by Wilson and 6 s Miles4 , Dharmendra and Rees and Young • Table 1 also presents a short summary of some more recent 7 contributions in this direction • 1 2• Despite some frag mentary interesting evidences, the concensus had re mained that the leprosy bacillus had still not been cultivated. To begin with, one finds that the leprosy bacillus has survived in nature, as well as, in human/and ani mal hosts, possibly for many millennia. Thus, it cre ated hopes that its metabolic/nutritional enigmas may possibly be solved in future by approaching these in a systematic but an unorthodox manner. Firstly, it may be appreciated that each of the dif ferent groups of microbes (e.g. bacteria, rickettsiae, chlamydiae and viruses) is characterised by different metabolic/nutritional peculiarities3 , and the leprosy bacillus may belong to yet another nutritionally dis tinctive but hitherto unidentified group. Therefore, the task of cultivating the leprosy bacillus by solving its nutritional puzzle may begin by examining the princi pal metabolic pathways that are known today and po tentially possible in the microbial world. CHAKRABARTY et at. : LEPROSY BACILLUS-POSSIBLY THE RRST CHEMOAUTOTROPIC HUMAN PATHOGEN 1. Nutritional pathways and types known among bacteria 3 The studies on bacterial nutrition 1 . 1 4 have sug gested 2 main groups of microbes, viz. autotrophs and heterotrophs. The former requiring only simple inor ganic compounds to support life, obtaining the neces sary energy either from sunlight or oxidation of vari ous inorganic substances (chemoautotrophs); organic compounds are not utilised by chemoautotrophs. Such autotrophic organisms are mostly environmental and free-living. Heterotrophs on the other hand are described as organotrophs. Studies by various workers have re vealed that the differences between chemoautotrophs and heterotrophs may not be absolute, because there 7 are many facultative autotrophs4. 1 5- 1 . Thus, the classi l8 fication of Knight , specially the first two stages, re late to autotrophs and may explain the nutritional re quirements of the leprosy bacilli, and so these two stages have been described in the following paras. Stage l-Carbon is assimilated as CO2 and nitrogen from inorganic sources, specially NH3 . Energy re quired for reduction of CO2 and synthesis of proto plasm is derived either by oxidation of simple inor ganic compounds (chemoautotrophs), or by use of radiant energy (photosynthetic autotrophs). Stage 2-Energy and carbon compounds for as similation are derived primarily by utilisation of com pounds already more reduced than CO2 , with assimi lation of nitrogen from simple sources (N2 , NH3 , N03 ). Protoplasm is thereby synthesised. Compounds more reduced than CO2 are CO, C�, C2HS in n alkane series, including liquid paraffins, tetradecane etc, and benzene (CJI6) and its derivatives; and on the other hand are simple sources of N namely, NH 0H, 4 �N03, (N�hS0 ' urea etc. These would constitute 4 the nutritional basis of some organisms belonging to I this category 8 .1 9 . Organisms that grow by metabolising simple nutri tional sources of carbon and nitrogen constitute che moautotrophs that can adapt to various ecosystems. Most of these compounds can be derived from fossil fuels (FF) or their derivatives. FFs are - benzene, naphthalene, toluene, xylene, aniline and diphenyla mine, which are coal tar derivatives, while methane, ethane and their higher analogues, (tetradecane, hexa decane and liquid paraffins) are FFs derived from pe l troleum 9 . These compounds, of C and N, in a mineral salt minimal medium, constitute the complete growth medium for chemoautotrophs I 8. 1 9, including the soil 963 chemoautotrophs, where primarily most FF deposits - 1 are located (Table 3) 1 9 2 . Chemoautotrophs are widely distributed in the soil and marine environments22, many of them exist with 6 7 out FF, but survive on other elemental sources 1 . 1 ; however, these fall beyond the scopes of our present study. It may now be worthwhile to examine the question of nutritional pathways of leprosy bacillus in the light of above possibilties. Since leprosy bacillus had re vealed its inability to grow on any complex/conven tional media e.g. on those composed of blood/serum or tissue culture medium, it could be safely concluded l that it is not a heterotroph 8, despite its paradoxical growth in human or animal hosts (for explanation, see section 4). The only probability left was that it could basically be a chemoautotroph, belonging to Stage 2 , l of the nutritional category described above 8 . 2. Leprosy bacillus probably as the first chemoauto trophic pathogen isolated. While the leprosy bacillus failed to metabolise animal proteinslhormones/tissue culture medium 1 99 etc. provided in the test tube,surprisingly, ,when all Table I-Some media used for in vitro cultivation of M. leprae Growth medium °C Enriched. complex + mycobactin. eschelin Kato et al. 7 Propagation Conclusions 34; 1 5-22 ± MIN product Enriched. complex Bapat et al. 8 37; ? Symbiont with MAIS Enriched. complex. tetradecane etc. Chatterjee et al.9 32; 8-10; -20 ± Coccoid bodies Enriched. complex. repeated changes 10 Bhatia et al. 37; 35; 15; 4; -20 ? Numerous forms Sauton's enriched with foetal serum II Veeraraghavan 5 - 10 ? Low temp. growth Chemically defined and supplemented 12 Dhople et al. 34 ± dependent Critical O2 requirement * Vide list of References; MIN - mycobacterial or nocardial; MAIS - Mycobacterium avium - intracellulare - scrofulaceum complex8 ; ? doubtful or difficult; ± minimal - - INDIAN J EXP BIOL, OCTOBER 2001 964 these heterotrophic nutritional factors were replaced by simple C and N sources (see above), excellent growth of the presumptive leprosy bacilli from lep 23 rosy tissues of man . 24 and animals (mouse footpads, 25 26 armadillos, nude mice) . , occurred without any dif ficulty which could also be propagated indefinitely in vitro (Table 2) on various chemoautotrophic media 3 (Table 3 l •24 • These are described under sections 3, 4 and 5. Nutritional requirements in chemoautotrophic media indicated that C and N substrates are possibly available to the leprosy bacillus from fossil fuels (FF) 19 for its life support , and these therefore, appear as chemoautotrophs par excellence. 3. Silicon chemoautotrophy Besides FFs mentioned above, silicon (Si) from diatomaceous fossil earth can be used as an additional source of energy and for protein synthesis as it occurs 22 31 in humans, bacteria, fungi and diatoms . . 32 and can 21 be obtained by scavenging . Our studies showed that the acid-fast chemoautotrophic bacteria from leprosy tissues, as well as, several reference strains of myco- bacteria and nocardiae tested, could be trained to grow on a Si minimal medium initially having a small quantity of C supplied as asparagine and gradually 32 replace C in their biosynthetic processes . Electron probe microanalyser data on these bacteria confirmed 31 a significant Si uptake , and availability of different types of FF in both the human and soil ecosystems 19.33 (See section 4 for further information and Fig Ic). 4. Special metabolic substrates for chemoautotrophs It has been mentioned earlier (Section 1 ) that Stage 2 chemoautotrophs may show some evolutionary or adaptive digressions from typical behaviour, as the differences between nutritional stages are not abso lute l 8 • Thus, we find that leprosy bacillus or CAN bacteria as chemoautotrophs are able to utilise urea/asparagine (carbamide/carboxylamide) 19 , both being more reduced than CO2 • Gelatin is a substrate readily utilised by the leprosy bacillus, like most members of Nocardia spp and seems necessary for its human fathogenicity and survival in human/animal 3 hosts24. ; thus, collagenase present in leprosy bacillus Table 2-Details of the sources of leprosy bacillus (LB) strains included in the study Strain and donor(s) (Leprosy bacillus) t B2647 B2439 B263 1 B. Maestre (P 30) (BM) BH2 MLCD 68 MLCD 7 1 (R7 1 ) MLA 699 Nodule of 'nude' mice Biopsy or slit skin smear/fluid from human cases; School of Tropical Medicine, Calcutta In vitro culture of Nocardia brasiliensis Source of specimen MFP* work-up : 38th Passage MFP work-up : 42nd Passage MFP work-up : 35th Passage MFP work-up : 30th Passage Human biopsy Homogenate Armadillo spleen (Freeze dried) Armadillo spleen (Suspension) Armadillo spleen harvests Nude mice LB/CANb harvested LL case # 106 (total) TT case # I (total) Case history of human/animal biopsy Untreated, Female (49), Unknown Leprosy type. Untreated, Male (20), Lepromatous. Untreated, Female (40), . Borderline (Dimorphous) Untreated, Female (26) Lepromatous Untreated, Male ( 1 4) Borderline, (Dimorphous) Prototype of 22 similar isolates 3 Surviving ( J 0 ) M. lep raelCANb after y-irradiation 4 Surviving ( J 0 ) M. lep ra elCANb after y-irradiation 10 9 Not irradiated; contained ca. 1 0 / 1 0 AFB/CANb per ml '° 9 AFBILB/CANb ca. 1 0 1 1 0 1 ml Dr. Shepard's strains from CDC, USA Maximum CFU/ml AFBILB varied between 10 8 J 0 to 1 0 8 S.abouraud's (ca. J 0 CFU/ml) Dextrose Agar and Gelatin minimal agar t Strains B2647, B2439, B263 1 , B Maestre were donated by Dr. Van Landingham, USA; Strain BH2 from authors; strains MLCD68, MLCD7 1 (R7 1 ) , MLA 699 from Dr R J W Rees, IMMLEP, London; nodule, 'nude' mice from Dr. Md Ishaque, Quebec, Canada; biopsy 1 slit-skin smears from Dr S K Chaudhuri, Calcutta School of Tropical Medicine; N brasiliensis from Dr M Sanyal, Calcutta School of Tropical Medicine * MFP - mouse foot pad; CANb - Chemoautotrophic nocardioform bacteria CHAKRABARTY et al. : LEPROSY BACILLUS-POSSIBLY THE FIRST CHEMOAUTOTROPIC HUMAN PATHOGEN can cause a breakdown of collagen and release of gelatin, which is further broken down by the gelati nase also elaborated by it. However, it needs to be mentioned that in vivo, even in absence of gelatin, the leprosy bacillus can also survive by making use of 22 other substrates like NHt salts, urea, asparagine, Si , waxeslliquid paraffins etc . from commensal myco bacteria, and from in vitro environments. The nucleic 965 However, the speed of growth of different leprosy bacilli in the mouse footpad (MFP) varied (Table 2) significantly 36 (for further information, see sections 17, 18). However, Knight' s description of nutritional types did not lead to discovery of pathogenic chemoauto trophs, which continued to be known only among soil, 22 marine or deep oceanic bacteria • In vitro cultivated acid bases are available in plenty in the hosts; xan forms of LB provided an opportunity to examine their thine or hypoxanthine, as well as, guanine, are the relationship with nucleic acid bases that are needed by leprosy bacilli as 2 auxotrophs, lacking ability to synthesise these 6, 33 36. tissues, or clarify several other controversial concepts (see later section in vivo LB from human infectious 24). Table 3-Minimal medium (MM) and complete media Basic Chemicals g% Trace elements g% KH P04 2 K HPO. 2 (NH.hS04 C - source(s) (More reduced than CO ) 2 (see below) 0.3 0. 1 0.8 0. 1-1 .0 MgS04 MnS04 ZnS04 FeS04 CaCh 0.0005 Gelatin + MM Paraffin + gelatin + MM Paraffin + urea + MM Gelatin + MM + agar/agarose 0. 1 Complete media for chemoautotrophy· Designated Designated Designated Designated GM medium (1) PGM medium (2) PUM medium (3) GMA medium (4) * Addition of guanine at a concentration of 40 IlglmL is essential to satisfy the auxotrophic requirements of LB/CANb33 Table 4--Correlation of bacterial structures observed between in vivo and in vitro cultural forms Features Existing description and name(s) (in vivo) Probable identity and suggested nomenclature (in vitro) Bacillary Bodiess. 6 Solidly staining AFB Weakly staining AFB Pink/violet, blue staining (non AFB) AFB with polar or beaded bodies Granularlbroken forms Irregular staining forms Non-solid staining forms Cuneiform AFB AFB in clumpslclusterslbundles Spore-like bodies8 and 4 Coccoid bodies9• 23. 2 Granules in chains2?* Cysts rings with dots2?* Globi smaillIarge28 Granules2? Mycetoma granules2?* FilamentslSpider legs2?" Ascospore-like2?* Thallus Iike2?" Dark masses2?* 4 Vegetative bacilli (young)2 Vegetative bacilli (aging)23 Vegetative bacilli (0Id)))23 Sporulation (early» 26 * Arthrospores (early»29. 30 Arthrospores (early) Arthrospores (late) Branching mycelial fragments Mycelial aggregates Free arthrospores30 Free blastospores29.30 * Blastospores in hyphae23 Hyphal rings with blastospores Globular clumps of fragmented myceliaS Macroglobi (Nocardioform granule)30 Nocardial granule2? Nocardial hyphae2? Nocardial granule2? Nocardial granule2? Aggregates of blastopores Coccoid bodies Globi 'Fungal' bodies * Blasto�res, arthrospores and mycelia; hyphae and granules pertain to nocardioform characteristics with N. brasiliensis as the type species;2 * includes references by Bhatia and his colleagues 966 INDIAN J EXP B IOL, OCTOBER 2001 5. Evolution ofthe concept of chemoautotrophic nocardioform bacteria A search for a group that would satisfactorily ac� commodate the leprosy derived chemoautotrophic bacteria revealed that it would probably fit best within 21 the group described as nocardioform by Prauser , 37 , The nocardioforms exhibited (Figs l c, 2b) fungacious mycelia that broke up into rod shape or coccoid ele ments. On broad morphological grounds, it is not one which can be defined sharply, and individual strains 967 CHAKRABARTY et al. : LEPROSY BACILLUS-POSSIBLY THE FIRST CHEMOAUTOTROPIC HUMAN PATHOGEN Fig. l-{a) Growth ( 1 0 days old) of LB/CAN bacteria in gelatin minimal (liquid medium) with a top up paraffin layer; magnified (3 X); (b) Growth of colonies' (45 days old) of LB/CAN bacteria on gelatin minimal agarose medium slant; magnified (4 X); and (c) Growth 1 (2 /2 year old) of LB/CAN bacteria on gelatin minimal agarose slant, submerged nocardioform mycelia, thickened by intertwining and bear "conidial" chains. Possibly silicon was scavenged from the glass waIl; magnified 6 X. Fig. 2-{a) Growth (lO days old) of LB/CAN bacteria in slide culture in GM medium. Coccoid bodies, arthrospores are seen in early stage, and sprouting out of coccoid bodies into rods seen ( 'rod-coccus' transformation); some hyphae show a row of blastospores (B); scattered arthrospores (A) are seen. (800 X in oj.f. Z-N stain); (b) Slender wavy mycelia fragmenting into acid-fast "lepra bacilli"; 7 d old growth from GMA. Some precursors of arthrospores (A) and blastospores (B) and cluster (C) of arthrospores can be seen (800 . X in oj.f. Z-N stain). LB/CAN bacteria. Fig. 3-{a) Mycelia apprearing thickened by intertwining with each other, with pockets formed at intersections with slender mycelia which had produced numerous "lepra bacilli" within and around; both arthrospores (A) and blastospores (B) are seen. (800 X in oj.f. Z-N stain). LB/CAN bacterium; (b) Hyphae thickened by duplication/interwining, showing prominent arthrospores (A) and blastospores (B) (800 x in oj.f. Z-N stain). Table 5-Lipid profiles of LB, CAN bacteria and mycobacteria Bacterium M. leprae CAN bacteria* LL2, LL9, BM, A699, M. gordonae M. avium, M. simiae, M. malmoense, M. kansasii ADMI, ADM2 ADM3 ADM4, ADM5 and other mycobacteria � or keto (Type IV) q'or methyl (Type I) a' or methoxy or methoxy like (Type III) + + + + + + + + + + + Tuberculostearic acid or 10- methyloctadecanoic acid (lO Methylstearic acid 10 Me-C 1 8 :0) -* + + + + ro or dicarboxy (Type VI) + + + + + + + * Portaels F and Larsson L (personal communications : 1 99 1 ). ADMI to ADM5, armadillo-derived mycobacteria, groups 1 to 5. of nocardioforms may not reveal all the basic features proposed by Prauser 37. Thus, the term nocardioform was intended to bring together in an informal manner, a number of bacteria with similar characters, e.g., My cobacterium, Nocardia, Rhodococcus, aurantiaca 21 gordona etc . Rhodococcus often has a rod-coccus life-cycle, and occupies an intermediate position be tween several groups of nocardioforms. Thus, leprosy bacilli and their in vitro cultivated counterparts firstly appear not only to belong to the nocardioforms which further belong to a special group as chemoautotrophs. and hence, has been called che 23. 24 moautotrophic nocardioform (CAN) bacteria . However, other chemoautotrophic organisms also oc cur not infrequently, and have a common soil ecology although many species of each genus have possibly learnt to adapt to animal hosts and thereby acquire 21. 33 pathogenicity 6. Micromorphological variation of CAN bacteria CAN bacteria often have conflicting and confusing variations as observed by different workers (Table 4). Nocardia brasiliensis possesses acid-fast, slender, wavy. branching and fragmenting hyphae which are (X' • 1 2 3 • 4 • 5 Fig. 4-Mycolate chromatography (TLC) of CAN bacteria : lanes 1 , 2 CAN R7 1 , CAN BM; biopsy derived LB, lane 3; lane 4, M. lepraemurium; lane 5, M. gordonae. All except 4 seem identical in mycolate pattern. INDIAN J EXP BIOL, OCTOBER 2001 968 1 2 / 03/ 1992 UG TR10-1 G C- M S L AB - B T h e D ata Syst e m I nstru m e nt : Trio - l Sample : sensiti vity BMSCAN 6 · 61 1 00 41 77920 87 #3 (0 ) 7ST " 5· 44 6·61 4177920 74 #2 5· 44 4·17 O ������F=MT�� 3 1 5 233088 100 TIC #1 UG 12 / 03 / 1992 LA B - B The TRIO - l GC MS Data System Intrument : Tri o - l 6.62 ·I. FS ( b) 1425408 87 #3 7-70 0 6 · 62 100 1802240 74 #2 7-70 ·I. FS 5·45 0 100 � 8·12 I 7.78 253421328 T IC #1 t.FS 0 Min 12·0 13·0 14 Fig. 5(a), (b)--Lipid profile of CAN bacterial strains CAN-BM (vide Table 2) and CAN-LL9 by Gas-chromatography mass-spectrometry with controls. Prominent constituent was palmitic acid only without any significant presence of fatty acids or tuberculostearic acid (Courtesy : Professor Lennart Larsson, University of Lund, Sweden). LB/CANb grown on gelatin minimal medium. , CHAKRABARTY et al. : LEPROSY BACILLUS-POSSIBLY THE FIRST CHEMOAUTOTROPIC HUMAN PATHOGEN frequently interspersed with bluish coccoid bodies 7 , 9 3 3 3 (identified as blastospores 29, 0; 4. 9 ; see Fig. 3a, b) , 3 and irregular staining arthrospores 20. 21 2 . 24 (see also Sections 7, 8) and serve as a convenient model for reference description of the nocardioform morphol 3 ogy 8-40 : the former are quite pleomorphic in size and shape and seem to be blastospores, commonly seen in many actinomycetes 4 1 , eumycetes, but not uncom monly among nocardiae, typically in N. brasiliensis 3.3 appearing as bulging conidia 29. 0 8 . Under favour able conditions, a coccoid body (spore) germinates 40 into a vegetative bacillary filament 21 . 37 which stains red when stained according to Ziehl-Neelsen method. The bacterial filaments lengthen, branch out to form (i) tufts of hyphae or mycelia, and form (ii) entangled compact masses, called granules or clumping of 3 macrophages 29. 9. 42-44 (Fig. 2a, b). These granules appear possibly to be the in vitro counterparts of the globi seen in vivo in the leproma tous leprosy (LL) cases (Fig. 3a, b). The globular or the circumscribed morphology seems . to be due to their location within the host macrophage cells (Vir chow cells; see Refs 5, 6). The granules or globi rep 3 resent aggregates of CAN bacteria (see Fig. 7) or , ,3 .3 . leprosy bacilli and other actinomycetes 21 29 0 9 44 . 7. Granules and glohi The long filaments (see above) of LB/CAN bacteria found in the initial stages, fragment into slender acid fast bacilli which may look like lepra bacilli (Fig. 2b). The unfragmented filaments, as well as, CAN bacteria differentiate into cells with refractory or granular cy toplasm 5 and are characterised as nocardioform ar throspores (see below) 20. 21 . 24. 25 ; these do not bulge the cell-wall, or develop into blastospores which .3 .3 3 cause swelling of the bacterial cells29 0 8. 9 (Figs 3a, b); the latter, when detached from the parent cells, look like coccoid bodies, and may lie singly or in Table 6---D ifferentiation of Mycobacteria, Nocardia, Corynebac teria etc. on the basis of G+C% mole and genome size of DNA Organisms Corynebacterium Mycobacterium M. tuberculosis M. leprae CAN bacteria : LL9, TI33 Rhodococcus Nocardia G+C % mole Genome size 5 1 -59 6 1 -73 6 1 -73 56-57 57-59 59-69 6 1-69 1 . 1 x 1 09 2 x 1 09 1 .9 x 1 09 ' ( 1 . 6- 1 .8) x 1 09 9 1 .6 x 1 0 ? ? * Due to probable deletion mutation with a smaller size result ing in a loss of capacity of heterotrophism 969 Table 7-Radiation resistance of leprosy bacillus and related ones Radiation UV Ray y Ray Organisms Corynebacteria Mycobacteria CAN bacteria # S S R : 2.5 M Rad R : 2.5 M Rad S S R* R Rhodococcus (Nocardia related)* (Micrococcus radiodurans) Deinococcus radiodurans R : 2.5 M Rad R M. leprae # S Sensitive; R Resistant # From the results of Dr. RJW Rees, IMMLEP, London on tissue harvests of armadillo which yielded both M. leprae and CAN bacteria; * some members only, 2.5M Rad 2500000 RadslUnits of radiation; R* also resistant to UVRIsunlight as substantial reduction in viability 87 did not occur even by 7 days . = = = = Table 8-Collagenase aided mutilation - Effects of different fac tors on experimental mutilation of mouse footpads (MFP) Type of Inoculum CFUIMFP in O. 1 ml* Mouse Footpads Inoculated (No. ) Effects observed (> 4 months) Permanent con tractures clawing! deformities! mu tilations observed in MFP (No.) CAN Bacteria (3) 8 1 07/ 1 0 /109 CFU 1 mouse footpad* Le os" bacillus 10 110 1 1 09 BI 1 mouse footpad* 72 54 52 30 78 o 20 20 o e Controls Uninoculated cage-mates Litters of infected mice Forelimbs (uninfected) Collagenase alone Heated CAN bacteria · alone Nocardia brasiliensis 102+ 1 o t *Collagenase : 40 JlgIMFP; Collagenase producer, but not mutilogenic Table 9--Gelatin particle agglutination test (GPAT) and HUTRA test Antisera Source of Gelatin PGL-I against Leprosy particle HUTRA CANbacillus agglutinatitre antigen tion titre LL2 LL9 R 71 BM LL HUMAN LL HUMAN LL ARMADILLO MFP (x 30) LL control serum KIT control serum 2 048 512 2048 512 5 12 256 512 256 256 256 512 256 LL, lepromatous leprosy; MFP, mouse footpad passaged 30 times 970 INDIAN J EXP BIOL, OCTOBER 2001 2,4 c1usters 5 3 (Figs 2a, 3b), Although the thickness of hyphae of Actinomyces spp, practically never exceeds 8 1 micron across 29, 30, 3 , a blastospore may measure several fold its width, but may also be as small as tiny 2 dots 9, 44 . Slide culture of LB (Fig. 2a) shows forma tion of these spores from hyphal elements, which may in turn produce a fresh vegetative growth. Significance of spores of LB--Since the original 6 observation of Hansen 2, on spores of LB, a wide va riety of such forms (conidiospores, arthro 6 , spores 20,21 ,2 ,29 30 and blstospores 29,30) has been reported among the actinomycete nocardio 2,8 forms 20,2 1 , 9 3 comprising Corynebacterium, Myco- bacterium, Nocardia, Rhodococcus etc.. There are several reports23 , 24 on occurrence of spores among LB and LB-derived CAN bacteria and other in vitro cul tures 9, 10. The report of Microbiology Workshop of 1 4th ILC (Ref. 34) noted the occurrence of arthro spores and blastospores in LB/CAN bacteria. Katoch et at. could also repeatedly observe the mycelial and spore-like structures in LB/CAN bacterial culture maintained by them (see Refs 60-62). Desikan and Desikan 35 have reported on persistent foci of LL macrophage granuloma in the tissues of patients de spite prolonged chemotherapy and lack of any overt LB in such lesions , which could presumably be due to Fig. 6- 1 1-{6) Smear of growth of LB/CAN bacteria from GM liquid medium after 12 days, showing cigar-shaped acid-fast bacilli strik ingly similar to cigar-shaped cells within globi in LL cases. Hyphae bearing arthrospores (A) and blastospores (B) can be seen (800 X in o.i.f. Z-N stain); (7) Smear of a ruptured granule (in a homogeniser) of LB/CAN bacteria from GM agarose (22 days old). Mycelial net work, bacilli with clumps of coccoid bodies are seen (800 in o.iJ. Z-N stain); (8) Mouse footpad harvest showing LB into which strain BM was passaged. (800 X in o.iJ. Z-N stain); (9) Experimental mutilation in hind footpads of mice 6 months after inoculation of 1 07 CAN bacteria in the MFP adjuvanted with collagenase. This shows moderate degree of clawing (side view), with necrotic vascular 8 changes; ( 1 0) Mutilation seen in the hind MFPs 8 months after inoculation of 1 0 CPU of CAN bacteria aided with collagenase. J 2 shows loss of some terminal toes with necrotic vascular granuloma; and ( I I ) Section of mouse liver tissue showing numerous granules of CAN bacteria throughout the parenchymal cells and the sinusoidal spaces. The granules appear to primarily consist of blastospores or 'blue' bodies. (800 X in o.i.f. Fite-Faraco stain). CHAKRABARTY et al. : LEPROSY BACILLUS-POSSIBLY THE FIRST CHEMOAUTOTROPIC HUMAN PATHOGEN 97 1 viable spores in these tissues. The viability and infec tivity of the so called artI-.rospores (and blastospores) are difficult to determine and remained controver sial 44. 45. Many workers believe that these are the non viable forms of LB (Refs 36, 44, 45). The fact that the arthrospores of many actinomycete or eumycotic or ganisms are both viable and infective, it suggests that those of LB or CAN bacteria may have similar char acteristics 6. 27. The coccoid bodies on the other hand, seem to be the seeds which can withstand many in imical conditions e.g. host phagocytosis and antago nistic immune factors, higher temperatures (in vitro 90°C for 1 5 min) 43, strong UVR, intense gamma radiation (2.5 megarads for 114 hr) and exposure to other agents like Na-dodecyl sulfate (SDS), lysozyme etc.23.25 (see also section 8 and Table 7). These seeds seem to have potential to propagate the leprosy ba cillus in nature and human environments under inimi cal conditions as well as, during chemotherapy. Under favourable conditions (see below), these spores ger minate into vegetative bacilli4O. The growth cycles may repeat indefinitely 2 1 .37.40 . For more details see below (Section 8, Table 7, Fig. 3a, b). Spores are easily identified by acid-fast stain, Go mori's, as well as, Gram stains (partially). The blasto spores lack mycolates and do not show the acid-fast red colour. These take up blue or deep blue stain of methylene blue, and are called blue coccoid bodies9• 1 O• 8. Problems of morphological variations of leprosy . bacilli and CAN bacteria (CANb) These are described in Table 4 and the following paragraphs. It is evident that in vitro CAN bacteria have more hyphaVmycelial elements, as well as, ar- throspores, blastospores and granules, whereas, the leprosy bacilli in vivo have a preponderance of bacil lary rods (lepra bacilli) or bacilli - packed phagocytic cells; some showing irregular staining arthrospores, others coccoid bodies (or blastospores); yet others as non-sporulating hyphae or mycelia which are en countered infrequently in the tissueslblood, but can occur during massive, overwhelming LL infections; or in the nostrils in LL cases which somewhat simu late in vitro conditions. Thus, these show a distinct dimorphism between the culture (in vitro) form and the infectious in vivo bacillary form [cf. dimorphic fungi 3. 17. 30]. This diversity has produced considerable complexity. Apparently, medical microbiolo gists/leprologists are trained for and familiar with the recognition of typical lepra bacilli from tissues, but considerable confusion seems to exist in recognising all other form variants occurring both in vitro and in vivo (Table 4). The coccoid bodies, mycelial or hy phal forms, mycelial granules encountered repeatedly (Figs 2a, 3b, 6, 7 ) are either overlooked or not recog nised as true form variants of the leprosy bacilli, as also those bacilli that are weakly or incompletely acid-fast (see below; section 9). The blastospores or the seeds are of great impor tance in the life cycle of leprosy bacillus/CAN bacte ria (Fig. 3b). Adverse biological (nutritional), immu nological (host CM!), chemical (drugsi5 and physical agencies (higher temperature, y and UV [see Table 7] radiations, particularly in vitro) may lead to a switch over of vegetative cells (lepra bacilli) into blasto spores and arthrospores. The reverse process i.e. a germination (Figs 2a, 3a) of spores (Fig. 6) occurs upon withdrawal of the harmful influences and the Table 1 0000promin versus CAN-AGS responses in humans Antigen AFB mimi * No. cases Status Lepromin Alone CAN-AGS* CAN-AGS 160 3 IT 160 40, 80, 160+ 24 31 IT CAN-AGS CAN-AGS 160 160 CAN-AGS Alone 160 9 3 Vaccinated 3 LL BL LL Tf Dennal Response Nodular > l O mm Anergy (-) Nodular > 3 - > l O mm Weak, Variable Nodular* > lO mm 73/99 * mlmL, 1 million bacteria in each millilitre x thereof + Includes 6 cases of sonicated CAN-AGS*; independent of Lepromin described in Table 10 * CAN - AGs (4) as Incidence Lepromin Control 3/3 OK 92/92 80/81 OK, Except 3 OK, Dhannendra-AG Variable Weak, Variable 6/6 Parallel to Lepromin Not used 97 2 INDIAN J EXP BIOL, OCTOBER 2001 triggering effects of CaCI 2 , gelatin, xylene etc. and availability of guanine 34, 55, similar to gennination of spores4O as have been observed elsewhere. Additional factors are also probably involved in different eco systems. Difficulties of identification of CANblstored LB Rees devised protocols to declump leprosy bacilli de rived from armadillo splenic harvests26; Shepard et al. 36 (vide also Ref. 66) have applied a similar treat ment procedure on leprosy bacilli from mouse footpad (MFP) harvests. Despite these, all specimens of lep rosy bacilli predominantly showed non-acid fast clumps/granules or free bacteria after storage and transhipment. We also noted that many human biopsy and MFP harvests initially comprising mostly AFBs, gradually changed over, on storage, to non-AFB granular/bacillary fonns. On the other hand, CAN bacteria cultures consisting of a variable mixture of AFBs/non-AFBs when sent by us to several leprosy workers (D. Williams, USA; J. van Embden, The Netherlands; P. Klatser, The Netherlands) could not be easily recognised by them as cultures containing any typical LB/AFB. This was obviously because of fonn variations that occur spontaneously on storage as already observed by us (Table 4). Contrarily, several workers who had previous experience of such fonn variants (D. Pal4 1 , Calcutta; P. Basak, Calcutta; S. Gokhale, Pune) had no difficulty in recognising such dimorphic bacteria: van Soolingen (The Netherlands); F Portael (Belgium); V N Bhatia (Calcutta), because of their theoretical and practical understanding27 (per sonal communication to authors). Katoch et al. on the other hand could repeatedly verify these as true in vitro cultural fonns of or derived from leprosy bacilli as described by US46. 60-62 (also personal communica tion to authors; see section 1 5). The spontaneous clumping has also been described in vitro by Yama gami et al. 42 of macrophages. 9. Acid-fastness of leprosy bacillus and CAN bacteria Although nocardioform morphology is typical of this group, CAN bacteria apart from exhibiting such morphology, possess other distinctive characteristics too. These are moderately acid-fast when smears are prepared from leprous biopsy materials and stained according to Ziehl-Neelsen stain; however, these are much weakly acid-fast or even non acid-fast when obtained from stored biopsy homogenates, or from patients receiving chemotherapy, as well as, from in vitro cultures and many other sources 23. 27. 45 . For this reason, use ()f H 2S0 ( 1 %) coupled with a shorter 4 period of decolorisation has been recommended for acid-fast stain of leprosy bacillus/CAN bacteria 23. 24. Interestingly, the nocardiae themselves are weakly acid-fast and are stained, using H 2 S0 (1 %) only. 4 Some mycobacteria are also weakly acid-fast, how ever, not as weak as LB/nocardiae are. The weaker level of acid-fastness of LB is also reflected by its pyridine extractability in contrast with that of typical mycobacteria6. Other distinctive staining characteris tics of LB/nocardiae are their ready staining with Gram's23 and Gomori's33 stains, in contradistinction with that of mycobacteria. Despite the striking similarities between the leprosy bacillus and CAN bacteria on morphological grounds, more studies were carried out to find if further ho mology and identity exist between them. 10. Mycolate and lipid profiles as distinctive markers Mycolic acids occur only among several patho genic members of mycobacteria, nocardiae and cory nebacteria. These unique branched-chain lipids vary considerably in chain length, as well as, in the number of carbon (C) atoms in the chains in each of the dif ferent genera 2 1 . 40. While the chain length of myco lates and their C numbers are longest and highest re spectively among the mycolates produced by myco bacteria (C # 60-90), those produced by the nocardiae are comparatively shorter with fewer C atoms (C # 40-60). However, in some nocardia-related ones, e.g., Gordona-Aurantiaca, mycolates may be close (C # 68-74) to those of mycobacteria, and thus there may be an overlapping characteristic of mycolates among these 3 groups. The corynebacteria produce much shorter chains with fewer C atoms 3 8-40. Apart from their chain length and carbon (C) num ber, mycolates also serve as important tools for taxo nomic identification at genus and even species levels. Interestingly, there are . several components of myco lates which occur in some typical combinations among mycobacteria and are useful in their type identification (Table 5). Determination of mycolate and other lipid profiles of leprosy bacillus and CAN bacteria is thus of much importance for proving the identity of these 2 with each other. We found that opinion differs as regards occurrence of a methoxy or methoxy-like mycolate as a third component in M. Zeprae apart from ex and keto components46 (Table 5; see also Ref. 5 1 ). It was not detected on TLC when extraction was done by alkaline methanolysis process; this, however, was seen regularly when mycolates CHAKRABARTY et at. : LEPROSY BACILLUS-POSSIBLY THE ARST CHEMOAUTOTROPIC HUMAN PATHOGEN . were extracted by the acid methanolysis process (Datta et aI. 47). This could be due to a fragmentation (Philip Draper, personal communication, 1988) of some methyl mycolate component resulting in meth oxy or methoxy-like artifacts. However, acid metha nolysis of mycolates of M. bovis which has a similar lipid profile with a methyl mycolate component (Por taels et al. sl ) does not generate such fragments. Fur 8 ther, Datta et a1. 47, and Patil et al. 4 , studying M. lep rae from human biopsies found that the methoxy-like component from M. leprae (along with u and keto) always co-chromatographed with the reference u, methoxy and keto components from M. tuberculo sis following acid methanolysis. This suggested that if fragmentation of mycolates indeed occurs, it will in volve those of M. tuberculosis as well. These findings indicate that the third type of my colate i.e. the methoxy-like component genuinely ex ists in M. leprae, and being somewhat alkali labile, may escape detection if present in small amounts, as may haf-pen to some in vivo specimens (cf. Kondo & Kanai 4 ). It thus appears that CAN bacteria and LB possess an identical set of 3 different components of myco lates which was supported by the findings of Por taels SI (Table 5). This controversy, like several oth ers, based on biopsy derived characterisation of the · leprosy bacillus (e.g catalase; tuberculostearic acid etc) can be settled with reference to in vitro pure cultures of CAN bacteria. On the other hand, this also serves to identify the leprosy bacillus with CAN bac teria, and distinguish these 2 (and M. gordonae) from all other mycobacteria (Fig. 4). A similar controversy also centred around whether another marker namely, tuberculostearic acid (TSA) occurs as a true lipid constituent of leprosy bacillus, or not. The finding so. S I of several workers was that TSA was detectable in leprosy bacillus derived from armadillo livers when liver contains TSA, but not when it lacks TSA. Thus, this could be due to leprosy bacillus or other mycobacteria efficiently absorbing many host-derived metabolites, including TSA from liver 21 . 46, rather than producing it endogenously. TSA may thus originate from a miscellaneous bag of arma dillo derived mycobacteria (ADM) which the arma dillo usually hosts, even though no viable ADM could be always detected. The results showed 46 that TSA could neither be detected in any of the 4 in vitro CAN bacteria tested (Table 5), nor in any of the most bacil liferous (BI > 5) LL biopsies, in contrast to its pres ence being reported from 2 biopsies with poor bacil- 973 lary content (BI < 1 ; not in Table 5); the latter could· presumably be due to TSA-rich mycobacteria (other than leprosy bacillus) being present in many LL pa tients as superinfection. Although, evidences are much in favour of LB (and CANb) not having any TSA (Fig. 5a, b) as a genuine constituent of their lipid layers, the problem was investigated further by choosing another yardstick of contamination i.e. an extraneous (ADM) product that was known not to be a constituent of the leprosy bacillus. These were the secondary alcohols produced by ADM. The premise was that if the secondary alcohols were also absent in the leprosy bacilli, then a contamination of leprosy bacillus with extraneous metabolites e.g. secondary alcohols (and TSA) can be excluded and these may be genuine endogenous products of LB. This premise, however, turned out to be fallacious, as absence of these alcohols could be due to their rapid catabolic removal and failure to be detected. This explains why there is a wide fluctuation in the content of TSA in different armadillo-derived M. leprae dependent on the tissue concentration of TSA in each animal which is not compatible with an idea of endogenous bio synthesis 46. The most crucial evidence in this regard, however appears to be that of Kusaka and Izumi (1983i2 in which leprosy bacilli from two human lep romata showed absence of TSA. These findings are also in conformity with the results reported (Table 5, Fig. 5a, b; and personal communication) by Dr. L. Larsson. Thus, all the data and their critical evalua tion, led to the conclusion that the mycolate and lipid profiles of leprosy bacillus despite being shrouded in the complexities of host-derived contamination, ap peared to be as described in Table 5. These observa tions have been consistently supported by Wayne and Kubicas3 • Thus, the pure in vitro cultures of CAN bacteria because of identical patterns uphold the in vivo findings i.e. LB was TSA negative and possessed 3 mycolate components. 1 1 . Na-palmitate as a mycolate precursor substance in CAN bacteria / leprosy bacillus An analysis of the lipid layer of CAN bacteria re vealed further that palmitic acid was the principal constituent of lipid layer (L. Larsson, 1 992, personal communication to authors, vide Fig. 5a, 5b). The Mi crobiology Workshop of the 14th ILC 34 also reported on a role of palmitate in biosynthesis of mycolates of 5 leprosy bacillus. Kato et al. 4 reported on growth of leprosy bacillus in a palmitate medium. We devised a modification of the basic chemoautotrophic cultiva- 974 INDIAN J EXP BIOL, OCTOBER 2001 tion medium which was enriched with sodium palmi tate at a concentration of 1 mg/mL dissolved in di methyl sulfoxide (DMSO). Our preliminary studies, showed that there was a preponderance of acid-fast bacteria staining red, instead of blue or violet staining nocardioform granules. coccoid bodies of CAN bacte ria, suggesting more mycolate synthesis by the cells. It is known that leprosy bacilli can often be weak acid-fast, and even more so in vitro (as CAN bacte ria), possibly due to insufficient availability of pal mitate for synthesis of mycolates in the minimal me dia23 • Thus, the various characters of the leprosy bacillus and CAN bacteria studied showed a close identity between them involving a chemoautotrophic metabo lism, a nocardioform morphology, a weak acid fastness. and a Gram and Gomori stain positivity. Ex clusive mycolate and lipid profiles of these bacteria, seen now, strengthen the trend witnessed at different stages. 12. Physical characteristics and molecular biology : Studies on the DNA relationship of leprosy ba cilli and CAN bacteria We examined relationship with respect to their DNNnucleic acid make-up, between LB and CAN bacteria. Firstly. each type of DNA was examined for its G+C % mol (Ref. 55, 56). and for determination of genome size by gel electrophoresis. Finally, DNA was further used to carry out studies on gene(s) for 65 kDa protein for identification of the genus Mycobacterium and later for gene translating 36 kDa protein for iden tification of M. Zeprae specific sequences. The techni cal details are given in the following paragraphs (Section l 3). 13. Studies on mycobacterial DNA For tests to characterise DNA of LB/CANb, geno mic DNA was extracted both from M. leprae and CAN bacteria and studies were done on 1 6S rRNA, specific DNA for 36 kDa heat shock protein and an other two mycobacterial specific genes 57 with 383 and 44 1 bp fragments (work done in collaboration of Dr. P. Khandekar of National Institute of Immunol ogy, Delhi). Extraction of DNA from M. leprae showed that the cells were extremely resistant to lysis. Fresh LL biop sies with high BI count yielded rich M. leprae har vests which were easier to lyse for extracting DNA. However, stored LB suspensions/CAN bacterial cul tures offered high degree of resistance to lysis both by SDS digestion method ( 1 00°C for 8 hr) or by French pressure cell for cell lysis in guanidium buffer 58. While sequencing of 1 6S rRNA was difficult and la borious, base sequencing of the polymorphic region of Mycobacterium gene that translates a 65 kDa pro tein called heat shock protein (common generic and species specific) ' has proved useful for determining the position of M. leprae. Furthermore. 65 kDa DNA is for identification of genus and 36 kDa is species specific. PCR amplification of 383 bp and 44 1 bp genes with purified genomic DNA of M. leprae and CAN bacteria was done. PCR products were analysed by agarose gel electrophoresis. 14. Details of PCR technique for amplifzcation of 383 and 441 bp genes Tests were performed using 5 JlL of the purified DNA as unit volume; 50 J.1L of PCR reaction mixture (+ dNTPs; each, 200 J.LM, 1 .25 UTAQ DNA polymer ase and 0.5 J.LM. pooled). Required amplification: probes were TB I + TB2 and TB 1 1 + TB 1 2. M. tuber culosis DNA was used as reference DNA (see also Refs. 57, 58). Determination of presence of 36 kDa epitope by PCR was done in collaboration with Dr R Hartskeerl of Royal Tropical Institure of Amsterdam. The strains used were armadillo-derived M.leprae and a CAN bacterium, strain BM. The details of the method fol lowed have been described by Hartskeerl et ai. 59 ear lier. 15. Experiments on nucleic acid hybridisation Entire work was undertaken independently from cultivation steps of CAN bacterialleprosy bacilli. CAN bacteria from leprous human, mouse foo ad 23 ;26 and armadillo tissue specimens were obtained and purified cultures were propagated serially. Nine CAN bacterial cultures gave good growth by ATP biomass assessment and also by visual matching, and 20 more CAN bacterial cultures could also be grown subsequently. Independently cultivating/propagating leprosy bacillus/CAN bacteria in a new laboratory (CJIL, ICMR, Agra) was successfully achieved 60-62 . Extraction of nucleic acids was done as described by Katoch and COXS8, and adequate growth could be ob tained. All subsequent works on the nucleic acids and mycolate characterisation were carried out on the cultures developed at CJIL, Agra, India (see also Ref. 82). Studies were also carried out on nucleic acid hy bridisation using restriction fragment length polymor- � CHAKRABARTY et al. : LEPROSY BACILLUS-POSSmLY THE ARST CHEMOAUTOTROPIC HUMAN PATHOGEN phism (RFLP) and special PCR tests60-62 . At a physi caUchemical level, G+C% mole determination seemed of value to exclude some organisms from be ing considered either as LB/CANb (Tables 6, 7 )6 . Additional information on y and UV ray resistances of bacteria were available to evaluate if such heavily sequestrated markers (conferring such resistances) can be helpful in taxonomic identification of leprosy ba cillus and the suspected ones. (Table 7). These infor mation were available from Dr. R J W Rees, IMMLEP, London, as well- as, from our own work, presented at 14th International Leprosy Congress at Orlando. USA, 1 993 (Microbiology Workshop)34 . The results showed that on the basis of G+C% mole, lep rosy bacillus was close to CAN bacteria and Rhodo coccus sp. On the other hand, corynebacteria showed some similarities, but could be excluded from further considerations of relatedness to leprosy bacillus on account of widely differing genome size. All other bacteria in Table 7 needed to be excluded in consid eration of both these DNA parameters. It was found57-62 on the basis of initial hybridisation experiments that the results of homology studies be tween leprosy and CAN bacteria were definitely promising. Hybridisation occurred with respect to two M. leprae specific probes 6 1 . Subsequent detailed in vestigation on various gene regions showed marked differences from the known molecular characterisa tions based on a single reference strain of M. leprae. Information on 28 more clinical isolates is awaited and when available would be most interesting to find the extent of diversity or homogeneity that exists among M. leprae strains (see also subsequent sections 17, 1 8). 16. Evaluation based on other DNA parameters and probes Molecular probes, if applicable on in vitro CAN bacteria and in vivo leprosy bacilli may bridge the information gap on the characteristics of the latter, as seen on the basis of in vitro studies. On the other hand, information based on DNA RFLP tests appear to be of considerable value, but still needs to be fully evaluated. The polymerase chain reaction based on amplification of specific gene sequences (translating specific proteins of 1 0, 12, 1 8, 36 and 65 kOa) has proved useful in limited ways, although recent infor mation on genotypic strain diversity had made its ap plication of limited value34. 63. The initial idea concerning an absolute genetic ho mogeneity of all leprosy bacilli based on analysis of 97 5 only few isolates seemed untenable, as gradually a large number of strains from different geographical situations and often associated with discrete clinical states, became available for analysis and comparison. It showed in unequivocal terms, that CAN bacteria which had become indistinguishable from leprosy bacillus on numerous grounds examined so far, now show similarity of their DNA too by hybridising with 2 M. Zeprae probes61 . 62 , despite the fact that there are no valid universal probes for all isolates and other limitations (vide Section 1 8, para 1). 1 7 . The cluster called leprosy bacillus (M. leprae) Studies on DNA relatedness revealed a diversity among different LB isolates which could be due to its being prevalent for thousands of years over widely separated regions like India, China, Egypt, Africa, Europe, as well as, the New World with chances of segregation and divergent evolution, probably compa rable to those existing among plague and tubercle ba cille. These differences seen in phenotypes or clinical types of leprosy bacilli possibly depend on genotype differences. These often may result ,in a geographical segregation. Thus, M. leprae may form a dense cluster of human pathogenic strains, possibly genetic sub types, as evident from the work of different workers. The clinical diversities observed may be accountable in terms of discrete genetic diversities, e.g. multi bacillary or gaucibacillary5, clinical LL or IT types; lucio type64. s, histoid type64.65 , alopecia type64.6S, hy perbacillary single nodule type64. 65, pure neurific type64.65, ulcerative type64.65 and skin f:ustule type, and xanthenelhypoxanthene utilising type 3,24.26. These had thrown new light on several distinctly different bio logical types too e.g. those with long/short generation time (slow/fast growers) ; those with low or high yields in vitro; slow or fast growers in the mouse footpads66• These distinct but stable biotypes confirm the wide genetic variability within the cluster called leprosy bacillus which actually comprises many het , erogeneous subtypes. 18. Results of study on CAN bacteria : Could DNA homology be the yardsticks of their identifica tion ? Contrary to previous beliefs, studies carried out during last 5 years on DNA relatedness of different LBs using reference strains for comparison, revealed that a widespread diversity exists among these instead of a uniformitylhomogeneity. Studies on our strains suggested a considerable degree of homology with 976 INDIAN J EXP BIOL. OCTOBER 2001 different LB strains34,57.59 . Similar studies on homol ogy among and with respect to other LB isolates, as well as reference LB strains, revealed a lack of either genetic homogeneity or existence of a single identi fying yardstick67-70 or adequate number of specific probes. A variability of hybridisation intensities71 •72, seen could be accounted for due the fact that only 50% of DNA domain had been explored63 so far. Thus, on the basis of DNA, leprosy bacilli isolated from different human/animal/or geographical sources may be greatly heterogenous but sub-divisible into different types. In conclusion, identification of LB, based on nu merous characters which are shared by all the strains, like chemoautotrophic nutrition, nocardioform mor phology, specific mycolates, PGL-I, animal pathoge nicity and lepromin anergyIMitsuda74 responses may be relied upon as gold standards. DNA characteristics may be used to identify subtypes within M. leprae cluster for investigating ecological, epidemiological and global biovariability arid not for identifying the leprosy bacillus as a universal single type being im possible for the purpose. 19. Experimental mouse pathogenicity of leprosy bacillus/and CAN bacteria : from multiplication to mutilation Since the discovery of leprosy bacillus by Hansen2 (also widely known as Hansen's bacillus), it was not possible for a long time to establish either successful infection with this bacterium or reproduction of a mutilating disease in animals which was necessary for qualifying this pathogen as causing leprosy and fulfil the basic tenets of Koch3 . Shepard's discovery of the mouse footpad model showed the first extra-human multiplication of the leprosy bacillus rather than being a pathogenicity model5 • Gradually, however, with the discovery of a minimal local pathogenicity coupled with an occasional nerve infiltration, much of the psy chological reservations against it were overcome. The armadillo infection model which came soon after, proved its pathogenicity with an assured certainty75 ; still, however, a mutilation model in animal(s) which would typically duplicate the human leprosy for which it had been considered so unique and stigma tised, had yet to come. Our studies on pathogenicity of this germ were aimed at producing such a model advancing sequentially through the various stages of infective pathology of the disease ending up in muti lation. 20. Mouse pathogenicity of leprosy bacillus/CAN bacteria Several variants of the pathogenicity test were rec ognised76 - (i) In 2-3 week old mice : footpad multi plication of bacilli was transferable in series; (ii) Nerve infiltration in the footpads was observed occa sionally; (iii) Organ infiltration was observed regu larly; (iv) Minor deformities of toes at a low fre quency occurring spontaneously following footpad inoculation; and (v) In infant mouse : with the adju vanting effects of collagenase77 : deformity, clawing, contractures of toes of the footpads; loss of toes with necrotic vascular granuloma, at high frequency; and progressive bacillary infiltration of the internal organs and muscles. 21. Characteristics of the bacillary multiplication model in mouse footpads The model was reproducible using ca. 103 CPU (mainly bacilli) / MFP inoculum (Fig. 8) · for each mouse (n = 40 each batch), 2-3 week old, Swiss A strain. Periodically sacrificed and autopsied mice were assessed on the basis of microbiological, histo pathological and imprint smears of MFP tissues, as well as, the internal organs; these showed characteris · tics which had been reported earlier76• Additional features . noted were post-inoculation inflammatory . responses at 2, 6 and 10- 1 1 weeks which subsided slowly. All these reactions were considerably milder compared with those of Nocardia brasiliensis (control organism). When the inocula consisted of granules of CAN bacteria, a mild localised inflammation also oc curred which lasted for 4-6 weeks. The granules of CAN bacteria evoked typical granulomatous response in the subcutaneous tissues and showed their gradual disintegration. Infiltration of muscles, connective tissues and epithelial cells by bacillary or mycelial masses was seen frequently, and that of the nerve bundles only occasionally. Plenty of mycelial tufts emerged from many granule - laden macrophages (macrophage globi). By 6-8 months, the granules of CANb disintegrated nearly completely. releasing a large number of free acid-fast bacilli (AFB), single layered rings of AFB , small globi and some residual mycelia. These AFB . harvested from mouse foot pad (MFP), were similar to or indistin guishable from the bacillary preparations from in vitro cultures23.24 • and those from the human biopsy derived leprosy bacillus. or those after passages into MFP; the identity of these MFP isolates with leprosy bacillus CHAKRABARTY et al. : LEPROSY BACILLUS-POSSIBLY THE FIRST CHEMOAUTOTROPIC HUMAN PATHOGEN 977 / was established on the basis of several criteria studied including 36 kDa gene positivity59. 25 ; other important 21 criteria studied were a typical mycolate profile , PGL-I positivity and immunological identity with lepromin, and mutilation (Figs 9, 1 0). The histopathological pictures seen in the sections through liver spleen, kidney, muscles and other tis sues revealed a closely similar appearance. Myce lia/hyphae were seen running through the tissue layers beyond tissue boundaries, or parenchymal cells and collagen layers etc. Kidney showed maximum bacil lary masses, as granules or mycelial tufts invading and disrupting the nonnal architecture. Section of an infected liver has been shown in Figure 1 1 . Conversion of human, MFP or armadillo leprosy derived AFB into nocardioform granules in vitro, and their conversion to bacillary forms in vivo (in MFP) by host immunity mechanisms revealed their dimor phic character (Fig. 3a,b) described earlier. Thus, LL globi can be recognised as rudimentary granules within the host macrophages in immunodeficient LL 3 cases • 5. Our studies on multiplication of leprosy bacillus from different sources as well as of CAN bacteria in the mouse footpads with higher infecting inoculum 9 showed a multiplication potential up to 10 in course of 6-8 post-inoculation months. Invasion of kidney tissue by M. leprae in experimentally infected mice had been reported78• Such tissue invasion and morbid pathology as a result of MFP infection with leprosy or CAN, bacilli had not been often observed or reported by earlier workers, possibly because of lack of a fa miliarity with the dimorphic variations as occur in vitro or in the animal systems. However, it thus re vealed that the immunity mechanisms in mice could not contain or keep confined the infection within MFP only, which may get widely disseminated in the mouse, possibly due to an alteration of immunological 44 18 status comparable to the human LL cases5. • • 22. Studies on experimental mutilation model of lep rosy Strains used were - human biopsy derived leprosy bacillus (LL l , LL2, BM), and corresponding CAN bacteria (3 strains), and a reference pathogenic strain of Nocardia brasiliensis. The mice, as the same strain used originally, comprised 6- 10 day old ones in each batch (n=20), were similarly inoculated in both the hind foot-pads subcutaneously; uninfected mice served as controls (n=20). Each inoculum comprised ca. 101 or 108 or 1 09 CFU of AFB of leprosy bacilli or CAN bacteria in 0. 1 mL of liquid culture medium (GM) without, or mixed with, 40 J.1g (for each MFP) of collagenase (type VII lyophilised, Sigma laborato ries, USA), injections were given under stringent ste rility precautions. The experimental protocol followed is described in Table 8. A composite picture of the various deformities cli maxing into mutilations and loss of toes was recorded in Table 8. Figures 9, 1 0 show mutilations in different stages and that these occurred in significantly high frequencies when aided with collagenase in the start ing inoculum. Earliest deformities manifested around 9 10- 1 2 weeks with the largest inoculum (10 CFU) in some mice only. Gradually, and with the passage of time (> 4 months), the earliest seen deformities pro gressed to clear-cut clawing, contractures, loss of one or more toes, and necrotic vascular granuloma (only with high inoculum supported by collagenase) ending up in extensive mutilations at high frequency in ani mals after 7 -8 months. Animals with inoculum sizes of lower magnitude showed milder and slower devel opment and lesser permanent deformities/mutilations. In animals where the inocula did not contain any col lagenase, these could occasionally develop any clear cut clawing, and definite mutilations were never seen. Biopsy sections from the florid mutilation lesions showed infiltration of host tissues by leprosy bacil lus/and CAN bacterial1 , which could be repeatedly isolated from such lesions and their identity was veri fied19 • Histologically, the sections showed extensive loss of tissue structure and collagen architecture, with disintegration of muscle fibres and tissues studded with acid-fast granules associated with perivascular infiltration of blood vessels by mononuclear cells and lymphocytes. Nerve infiltration was frequent. We discovered that collagenase produced endoge nously by the leprosy bacillus or given exogenously provided in tum gelatin, serving a ready source of nutrition for the leprosy bacillus or CAN bacteria, thereby acting as a key metabolic factor responsible for virulence. Once the growth of these bacteria was initiated they could produce their own collagenase and keep the cycle going. N. brasiliensis, though a good collagenase producer30 and could produce granulomatous pathology in man and mouse, was un able to cause mutilation, possibly due to differences in the specificity of its collagenase action, or other cru cial virulence factors which it lacked. In the context of our observations, the large number of other evi dences on the leproma juice-derived growth factors 81 (Dhople and Hanksso, Dhople and Ibanez ) and gela- 978 INDIAN J EXP BIOL, OCTOBER 2001 nerves and produced clawing, loss of toes in high fre quency, and mutilation as in the humans, when adju vanted with collagenase; and (4) MFP or armadillo passaged LB or CAN bacteria yielded identical CAN bacteria. Presence of identical mycolate and lipid profile, lepromin anergy and Mitsuda response, PGL-I and 36 kDa protein specificity, typical genome size and G+C % mole were in further conformity with the postulates of Koch. tin as an important metabolic substrate (Katoch et al. 82) for the leprosy bacillus (LB/CANb) thus became explainable. Urea which is another metabolisable sub strate of leprosy bacillus (Chakrabarty et al. 23.24) is also present abundantly in the host systems and may adequately supplement the nutritional requirements of the leprosy bacillus (see also Section 4). In florid lepromatous leprosy cases, a known bio chemical process is an extensive destruction of colla gen tissues in the body and an excretion of hydroxy proline in urine (Dharmendrai. Although mutilation can frequently occur due to trauma to, and infection of, the insensitive limbs, possibly even without de struction of collagen tissues5 •64,65 , a common under lying pathology in many LL cases seems to be an ex tension of lepromatous granulomatous process into connective tissue of bones and joints, resulting in a loss of collagen materials, leading to their dislocation and sublaxation. This may result in a shortening of fingers/toes and other more severe types of mutila tions, even in absence of injury and infection5 , as may also occur when the joints become swollen, and the digits angulate and shorten65 . The destruction of col lagen tissues in the fingers and toes in such cases pos sibly accounts for deformities/mutilations 5.34. Mutilations seen in humans seem to be uniquely symbolic of leprosy. This is because, leprosy infec tions are known to occur naturally or experimentally in a number of animals. In primates, granulomatous tissue hyperplasia had been noted in chimpanzees and sooty mangabey monkeys in the face and ears in some instances, mimicking the human features of deform ity. Yet loss of toes/fingers etc. is not seen commonly. Armadillos which present a clinical state like human LL, also do not manifest mutilationlloss of toes etc. The mouse, possibly used extensively including the different immunocompromised ones (nude, skid etc.), also do not commonly develop mutilation, or loss of toes or other anatomical deformities. Mutilation there fore naturally develops only in human LL cases rather late, and experimentally in the mouse model as de scribed. We have noted that the principles or postulates laid down to establish the aetiological role of an organism as a pathogen had met with difficulties with respect to the leprosy bacilli. The present studies showed that Koch' s postulates could possibly be fulfilled as ( 1 ) AFBs regularly occur as LB/CAN bacteria in leprosy cases; (2) these could be easily cultivated and main tained in appropriate media as CAN bacteria in vitro ; (3) CAN bacteriaILB multiplied in MFP, infiltrated 23. PGL - I, lepromin and CAN bacterial antigens as test parameters J The specific anergy to leprosy bacillus appears largely due to the presence of unique phenolic gly colipid (PGL-I). In studying, therefore, anergy to CAN bacteria (as well as leprosy bacilli), it is neces sary to show firstly that all CAN bacteria tested as antigens (CAN-Ag) do indeed have PGL-I as their constituent. We, therefore, undertook in vitro tests (Table 9) to detect the presence of PGL-I; secondly by intradermal tests for detecting anergy in LL cases, side by side, with nodular reactions in IT cases with these antigens. It had been noted earlier (Table 2) that a large number of CAN bacteria were isolated by 2 .25.27 .36 US 3 ; four representative cultures of these CAN bacteria obtained by in vitro cultivation of LBs (2 from LL cases and 1 each from an armadillo and a mouse footpad) were used as antigens for being tested in parallel with the standard human biopsy derived lepromin comprising LB (Table 9). Tests were done in 2 different ways - detecting PGL-I specific antibodies in various positive sera, by using known PGL-I-antigen (PGL-Ag), and detecting PGL-Ag in CAN bacteria by using such sera con taining anti-PGL-Ab. Antibody detection tests were based on the reference sera from the manufacturers (Serodia®, Fujirebio, Japan), and those procured by us from clinically and bacteriologically confirmed un treated LL cases. PGL-I-Ags were provided (i) by the manufacturers (Fujirebio) as a triglyceride fragment incorporated within gelatin particles, this was called gelatin particle agglutination or GPA test; or (ii) as prepared by us by coating tanned human RBC (0 group, Rh +) with standard (reference) PGL-I ob tained from Dr. J.Colston (IMMLEP, MRC, London, Courtesy WHO); and additionally (iii) by using boiled antigen (presumably PGL-I, see below, Table : 9) ex tracted from CAN bacteria to coat RBC as in (ii) and perform tests called Human Tanned RBC Agglutina tion (HUTRA) test. Preparation of hyper-immune CHAKRABARTY et al. : LEPROSY BACILLUS-POSSIBLY THE FIRST CHEMOAUTOTROPIC HUMAN PATHOGEN 979 anti-PGL-I rabbit sera was done by us which required prolonged immunisation extending over (10- 1 2 injections i.c/s.c/i.m) 2-2 1/2 months. Noteworthy features sought an immunological answer to the question of identity of CANb with LB. We found that anergy, or contrarily, Mitsuda-type responses towards 4 chemo rabbits, autotrophic nocardioform antigens (CAN-Ags) and a disappeared in the middle order range and higher di and borderline cases of leprosy. The antigens injected ticles or on RBC as carrier particles, reference (manu plete anergy to CAN-Ags was seen in were immunological paralysis in severai while marked prozone effects at lower dilutions which lutions. Using known PGL-I,Ag either in gelatin par control standard lepromin were tested in 73 LL, per patient varied from 5 IT to a minimum of 2. Com 92/92 instances facturer's) antiserum, known LL patients' sera, and tested on were run in parallel to determine cross-reactivity with been vaccinated before. Concurrent studies with the antisera prepared against CANb antigens (see below) 24 LL cases. The anergy was weakly modi fied or unmodified in 3 other LL cases which had each other. The results showed that mutual cross same antigens tested on 33 IT cases showed clear that PGL-I synthetic Ag-fragment, PGL-I complete instances. CAN bacteria, therefore, despite their ori reactivity of a high order was present which meant Ag (MRC, WHO) and that extracted from CAN bacteria, were closely related or possibly even identi cut, dose-dependent, Mitsuda-type responses in 80/8 1 gin from different unrelated leprous human, mouse footpad (MFP) and armadillo tissues (Table 2), ap- cal. Once the identity of Ag (PGL-I) was established, . peared to be immunologically and pathogenetically dilutions (11500) for slide/tube agglutination tests to bacillus, on the basis of these and other parameters74 detect PGL-I in CANb. as described earlier (Table several hyper-immune rabbit sera were used in high Results of both the gelatin particle agglutination test (GPAT) and HUTRA (vide Table 9) tests for de tection of PGL-I Ag in various CANb are described in Table 9. It could be seen that these results tallied fairly close with each other (both the systems), how ever, confirming the presence of PGL-I in all CANb tested. The higher titres of Ab obtained with HUTRA identical with each other and also with the leprosy 10). 24. Further parameters of study for distinguishing or identifying LB with CANb and how these are applicable in practice Additional parameters studied were the antibiotic 3 sensitivity8 and electron microscopic morphology84, as well as, an assessment of taxonomic relatedness 82 or more characters33. These studies .-fur tests suggested that the presentation of PGL�I com based on than GPAT whose suitability for the purpose is not ceedingly close homology of the leprosy bacilli with pOnse lates by leprosy bacilli and CAN bacteria with the aid plete antigen on human RBC was of higher sensitivity fully understood. Another reason for this observed difference could be due to differences in res between humans and rabbits with respect to PGL-1. The interesting point to note was that PGL-I was formed in large amount in GM medium45, as evident from unstained hallow around CANb in acid-fast stain. Problems observed while immunising rabbits were the failure to produce antibodies initially in sev eral rabbits and prozone effects in others, resembling immune - complex phenomenon in LL cases. These antigens thus provided an opportunity to de ther illustrated their similarity and showed an ex different CAN bacteria. Fulfilment of Koch' s postu of collagenase appears to be a strongly sugges tive I corroborative point too (vide section Thus, nity spectrum (LL to IT). Moreover, the responses of LB at LL and IT poles seem to be respectively, either one of complete anergy (in LL cases), or one of late nodular reaction (in IT cases). On the other hand, it is believed that when a suspect bacillus produces anergy in LL cases, but a Mitsuda type response in IT cases74; it is most likely to be a leprosy bacillus 1 • Us ing CANb-Ag side by side with lepromin-Ag, we in vitro culture forms or in vitro cultures of leprosy bacilli apart from revealing LB in a new light, had offered solution to some unsolved practical prob lems, - the questions of non-viable forms of LB etc. were evaluated earlier (vide section questions of practical solved. termine the responses of anergy or late nodular reac tion among leprosy patients across the leprosy immu 22). 7). Several other significance may now Generation time (GT) of LB based on clinical or be in vivo assessments suggested this to vary from 1 2 to 1 3 days6 or even much longer. Determination of GT on in vitro isolates of CANb showed it to be from ca. 40 to 44 hr (Ref. 85). earlier This was significantly shorter than (in vivo)' assessments, although it was still much longer than that of most slow-growing bacteria. One reason f�r such errors seems to be due to the fact that GT for all bacteria has been determined with re spect to in vitro cultures, and the in vivo values com- 980 INDIAN J EXP B IOL, OCTOBER 200 1 puted for LB represented multiplicity of unanalysed factors, e.g. host immune processes, opportunities for , -2 germination of spores (as in the case of LB 9, 1 0 20 4 ; vide section 7), as well as, other factors like chemo therapy. As it was possible to objectively determine GT by in vitro parameters (instead of indirect in vivo methods), GT became an important tool, firstly to suspect genuine phenotypic differences between lep rosy bacillus strains, and secondly to find out the ge 23 25 66 netic basis of such variations5 , - , (vide also section 1 8). Prior to in vitro cultivation of LB , controversy ex isted on almost all the characteristics described for it. It was presumably so because such descriptions were based on host-derived and host-modified LB, often contaminated with host-products. Similar controversy existed whether the catalase enzyme occasionally re ported in biopsy-derived LBs, truly belonged to LB or was just a host derived contaminant. Surprisingly, even with the actual detection of a katG gene in LB 86 (for catalase-peroxidase), its non functional nature remained unexplained, possibly because spores in Mycobacterium could not be thought of; this, how ever, could be easily explained in terms of LB/CAN bacterial spores (Tables 4, 6), which like all spores do not store vegetative enzymes3 , and appear non func tional (see also Section 7). It was clear that genesis of most of these problems was due to failure to appreciate that LB could belong to a genus other than Mycobacterium, although the LB had been constantly compared to mycobacteria and M. tuberculosis for understanding it, too often 41 with misleading results • Because both LB and tuber cle bacillus shared similar characters of acid-fastness, these were included within the genus Mycobacterium during the later half of 1 9th century when the princi ples of nomenclature of bacteria and their appropriate taxonomic allocation were not well developed, and often done prematurely and arbitrarily. In such a background Hansen' s bacillus was allocated to Myco bacterium, and as it caused leprosy, it was called My cobacterium leprae. However, it was not known until 1 888 when Nocard discovered another group, . later called Nocardia which was closely related to the my cobacteria and many related groups, which were also acid-fast and often pathogenic. Chakrabarty and Das tidar33 on the basis of a taxonomic study of 82 char acters initially, suggested that LB could be closer to Nocttrdia than to Mycobacterium. Pal et al. 4 1 corrobo rated these observations concentrating on its human 45 pathogenic aspects. Chakrabarty and Dastidar re- viewing the data obtained by various workers on the relationship of LB with mycobacteria and related gen era based on molecular biology and taxonomy, felt that inclusion of LB within Mycobacterium could be seriously questioned for a re-examination. In this background, in vitro CAN bacterial cultures had generated an accurate picture of leprosy bacillus which had helped redraw I reconstruct with fidelity the often indistinct/incomplete characters of in vivo leprosy bacillus. This pertains to nearly all the char acters studied. Thus, a vast array of evidences seem to have finally established the identity of leprosy bacil lus with in vitro cultivable form of human pathogenic chemoautotrophs derived from leprosy tissues. It is evident that LB is fundamentally a soil chemo 1 autotroph 9,3 1.32 which has adapted itself to a human pathogenic career in course of evolution like most of the nocardioforms or actinomycetes. It is plausible to hypothesise that LB or soil CAN bacteria are trans mitted primarily as soil-to-human infections, and then as man-to-man one33•86. These involve epidemiologi cal and containment strategies for leprosy different from the one being followed at present which is mainly based on eradication by use of multidrug ther apy (MDT). Acknowledgement The authors are grateful to late Dr. S K Chaudhuri, former Professor & Head, Deptt of Leprology, School of Tropical Medicine, Calcutta. We also acknowledge with gratitude the help obtained from Profs F. Por taels, L. 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