Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com PEER REVIEW HISTORY BMJ Open publishes all reviews undertaken for accepted manuscripts. Reviewers are asked to complete a checklist review form (see an example) and are provided with free text boxes to elaborate on their assessment. These free text comments are reproduced below. This paper was submitted to the THORAX but declined for publication following peer review. The authors addressed the reviewers‟ comments and submitted the revised paper to BMJ Open where it was re-reviewed and accepted. ARTICLE DETAILS TITLE (PROVISIONAL) AUTHORS Diagnostic values of soluble mesothelin-related peptides for malignant pleural mesothelioma: updated meta-analyses Cui, Ai; Jin, Xiao-Guang; Zhai, Kan; Tong, Zhao-Hui; Shi, HuanZhong VERSION 1 - REVIEW REVIEWER REVIEW RETURNED GENERAL COMMENTS Pantazopoulos, Ioannis Sotiria General Hospital, 12th Dept of Respiratory Medicine 15-Sep-2013 Thank you very much for giving me the opportunity to review this manuscript. Recently, mesothelin family proteins (mesothelin & megakaryocyte potentiating factor) have attracted attention as potential candidates as malignant mesothelioma tumor markers. The authors of the present meta-analysis have investigated the diagnostic accuracy of mesothelin family proteins for the diagnosis of malignant pleural mesothelioma. Regarding the manuscript itself: Major remarks • The manuscript is generally written in acceptable English, but there are several sentences that could be polished to make the meaning sharper and more to the point. I strongly advice some editing by a native speaker. • The term “soluble mesothelin-related peptide” or “SMRP” is referred to the three isoforms of “serum mesothelin” which can enter the blood circulation, either by shedding of the membrane-bound portion (variants 1 and 2), or by a frameshift mutation (variant 3). Although serum mesothelin refers to all isoforms that are present in the circulation, research shows that variant 1 is predominantly expressed and released from the membrane (refer to http://www.ncbi.nlm.nih.gov/pubmed/16702385). For this reason, most experienced research groups now prefer the term “serum mesothelin” or “mesothelin”. The term SMRP is an outmoded term, which unfortunately is still used by some. I strongly advice the authors to omit the term „SMRP‟. A short letter by Hellstrom in 2008 (!) (http://www.ncbi.nlm.nih.gov/pubmed/18789894) clearly explains why it‟s better not to use the term „SMRP‟. To refer to both mesothelin and MPF you can use the term “mesothelin family proteins”. • In the conclusion section the authors state that “…positive test results indicate that further invasive diagnostic steps might be necessary for the diagnosis of MPM”. I agree that a positive mesothelin test would provide a strong incentive to urge ensuing Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com diagnostic steps. However, this is a suggestion and not a conclusion so it would be better to include this comment only in the discussion section. Furthermore, in the discussion section you report that patients with MPM have a near 6-fold higher chance of being SMRPpositive compared with patients without MPM, and that this is not high enough for the clinical purpose as it might lead to an inordinate number of individuals undergoing unnecessary diagnostic work-ups or biopsies. This is a contradictory statement. • The title of the current paper is almost the same with the previous paper that you have published entitled “Diagnostic value of soluble mesothelin-related peptides for malignant mesothelioma: A metaanalysis”. Change it or at least say that this is an update. Minor remarks • Discussion section: Explanations regarding SROC and DOR have been previously described in your paper entitled “Diagnostic value of soluble mesothelin-related peptides for malignant mesothelioma: A meta-analysis” (Respir Med 2010; 104:149-56). Do not repeat them. Just say “…as previously described” • Multiple assays are available today for the measurement of mesothelin. However, only Mesomark TM (Fujirebio Diagnostics Inc., Malvern, PA, USA) kit has been approved by the US Food and Drug Administration. If different assays were used in the studies that you included, please mention this in the limitations section? • Diagnostic accuracy section, line 16: “25 serum SMRP assays”. You mean 25 studies that measured SMRP for the diagnosis of MM? Same for line 34. • Page 10, line 57: Delete the word “that”. • Page 11, line 50: “…compared with from healthy controls or asbestos exposed people.” Delete the word from • Page 14, line 31: “It a value is greater than 10…” has to be “If a value is…”. - The manuscript receives two reviews at THORAX but the other referee had declined to make the comments public. VERSION 1 – AUTHOR RESPONSE Comment 1: The manuscript is generally written in acceptable English, but there are several sentences that could be polished to make the meaning sharper and more to the point. I strongly advice some editing by a native speaker. Response 1: We have tried our best to use correct English. Comment 2: The term “soluble mesothelin-related peptide” or “SMRP” is referred to the three isoforms of “serum mesothelin” which can enter the blood circulation, either by shedding of the membrane-bound portion (variants 1 and 2), or by a frameshift mutation (variant 3). Although serum mesothelin refers to all isoforms that are present in the circulation, research shows that variant 1 is predominantly expressed and released from the membrane (refer to http://www.ncbi.nlm.nih.gov/pubmed/16702385). For this reason, most experienced research groups now prefer the term “serum mesothelin” or “mesothelin”. The term SMRP is an outmoded term, which unfortunately is still used by some. I strongly advice the authors to omit the term „SMRP‟. A short Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com letter by Hellstrom in 2008 (!) (http://www.ncbi.nlm.nih.gov/pubmed/18789894) clearly explains why it‟s better not to use the term „SMRP‟. To refer to both mesothelin and MPF you can use the term “mesothelin family proteins”. Response 2: We agree that this is a very valid point. Throughout, “soluble mesothelin-related peptides/SMRPs” have been replaced by “mesothelin family proteins/SMFPs”. Comment 3: In the conclusion section the authors state that “…positive test results indicate that further invasive diagnostic steps might be necessary for the diagnosis of MPM”. I agree that a positive mesothelin test would provide a strong incentive to urge ensuing diagnostic steps. However, this is a suggestion and not a conclusion so it would be better to include this comment only in the discussion section. Furthermore, in the discussion section you report that patients with MPM have a near 6-fold higher chance of being SMRP-positive compared with patients without MPM, and that this is not high enough for the clinical purpose as it might lead to an inordinate number of individuals undergoing unnecessary diagnostic work-ups or biopsies. This is a contradictory statement. Response 3: The sentence “the positive test results would indicate that further invasive diagnostic steps might be necessary and could possibly lead to an earlier diagnosis.” has been removed from the conclusion section. The sentence “This might lead to an inordinate number of individuals undergoing unnecessary diagnostic work-ups or biopsies.” has been deleted from the revision. Comment 4: The title of the current paper is almost the same with the previous paper that you have published entitled “Diagnostic value of soluble mesothelin-related peptides for malignant mesothelioma: A meta-analysis”. Change it or at least say that this is an update. Response 4: We have revised the title. Comment 5: Discussion section: Explanations regarding SROC and DOR have been previously described in your paper entitled “Diagnostic value of soluble mesothelin-related peptides for malignant mesothelioma: A meta-analysis” (Respir Med 2010; 104:149-56). Do not repeat them. Just say “…as previously described” Response 5: We have revised the manuscript according to the above comments. Comment 6: Multiple assays are available today for the measurement of mesothelin. However, only Mesomark TM (Fujirebio Diagnostics Inc., Malvern, PA, USA) kit has been approved by the US Food Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com and Drug Administration. If different assays were used in the studies that you included, please mention this in the limitations section? Response 6: The following statement “Fourth, multiple assays were available for determining mesothelin concentrations, and Mesomark, which has been approved by the US Food and Drug Administration, was used in most studies. The other mesothelin ELISA kits were used in 4 studies. 21, 30, 31, 35 ” has been added into the revision. Comment 7: Diagnostic accuracy section, line 16: “25 serum SMRP assays”. You mean 25 studies that measured SMRP for the diagnosis of MM? Same for line 34. Response 7: Yes, I do. Corrected. Comment 8: Page 10, line 57: Delete the word “that”. Response 8: Done. Comment 9: Page 11, line 50: “…compared with from healthy controls or asbestos exposed people.” Delete the word from Response 9: Done. Comment 10: Page 14, line 31: “It a value is greater than 10…” has to be “If a value is…”. Response 10: Revised. VERSION 2 – REVIEW REVIEWER REVIEW RETURNED Kato, Bernet Imperial College London, Respiratory Epidemiology and Public Health 02-Nov-2013 GENERAL COMMENTS GENERAL COMMENTS This paper reports the results if a meta-analysis to evaluate the effectiveness of soluble mesothelin-related peptides (SMRP) in serum and pleural fluid to diagnose malignant pleural mesothelioma (MPM). Current therapeutic options for MPM are limited and the prognosis is poor. Therefore systematic reviews of the best available Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com evidence for diagnostic accuracy of biomarkers for MPM can inform decision making in clinical practice. The results are therefore of considerable interest in clinical practice. RESULTS AND CONCLUSIONS Page 15: Under the “Discussion” section it is not clear what message the authors are putting across in the sentence that begins “The positive SMRPs….”. This should be clarified. Furthermore, based on the results from the meta-analyses conducted in the paper would the authors recommend or not recommend the use of soluble mesothelin-related peptides (SMRP) in serum and pleural fluid to diagnose malignant pleural mesothelioma (MPM) in clinical practice? Minor comments Page 4: The second point under “Key messages” is not clear. Page 11, the meaning of the sentence “Except for 2 studies, all samples were collected from the consecutive patients in the remaining 28 studies” is not clear. Page 16, where limitations of the study are discussed: The sentence that begins with “Second, pathological types of MPM ….” is not clear. Page 17: The sentence that begins “The negative results of SMRP …” is not clear. Edits Page 4: Under “strengths and limitations of this study”, the first sentence should read “The studies included in this meta-analysis were methodologically satisfactory and their results were consistent. Page 8: Second sentence in paragraph 2 should read “The studies including at least 10 specimens were selected to be included in the meta-analyses, since very small studies may be vulnerable to selection bias”. Page 10, line 3: spelling of the word “Appendix” should be corrected. th Page 12, 4 line from the bottom: replace the word “somehow” with “some”. Page 47: In the last column of the table for STARD checklist for reporting of studies of diagnostic accuracy, what does A/N mean? Did the authors intend to write N/A (not applicable)? Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com VERSION 2 – AUTHOR RESPONSE DR. BERNET KATO Comment 1: Page 15: Under the “Discussion” section it is not clear what message the authors are putting across in the sentence that begins “The positive SMFPs….”. This should be clarified. Furthermore, based on the results from the meta-analyses conducted in the paper would the authors recommend or not recommend the use of soluble mesothelin-related peptides (SMFP) in serum and pleural fluid to diagnose malignant pleural mesothelioma (MPM) in clinical practice? Response 1: The sentence “The positive SMFPs results might be somehow helpful in confirming (ruling in) MPM, suggesting that invasive diagnostic steps, such as medical thoracoscopy, might be necessary.” has been revised to “SMFPs might be helpful in confirming (ruling in) MPM if the results were higher than the cut-off values. Thus, positive SMFP test results suggested that invasive diagnostic steps, such as medical thoracoscopy, might be necessary..” Based on the results from the meta-analyses, I insisted that the following statement was reasonable “In conclusion, current evidence supported that SMFPs in both serum and PF were helpful markers for the diagnosis of MPM. The overall diagnostic performance of SMFPs in serum and PF was similar, and serum MPF had superior diagnostic accuracy compared to serum mesothelin. The negative results of SMFP determinations were not sufficiently to exclude non-MPM, whereas the positive test results might be helpful in confirming MPM.” Comment 2: Page 4: The second point under “Key messages” is not clear. Response 2: The original sentence has been changed into “Determination of soluble mesothelinrelated peptides might be helpful in confirming pleural mesothelioma if the results were higher than the cut-off values, while the negative results were not sufficiently to exclude non-mesothelioma.” Comment 3: Page 11, the meaning of the sentence “Except for 2 studies, all samples were collected from the consecutive patients in the remaining 28 studies” is not clear. Response 3: The original sentence has been changed into “The samples were collected from the consecutive patients in all studies but not 2 studies.” Comment 4: Page 16, where limitations of the study are discussed: The sentence that begins with “Second, pathological types of MPM ….” is not clear. Response 4: The original sentence has been changed into “Second, pathological types of MPM were not specified in 2 studies,34,41 epithelioid subtype of MPM was the most common pathological type in all studies, excluding the one reported by Creaney et al.25” Comment 5: Page 17: The sentence that begins “The negative results of SMFP …” is not clear. Response 5: The original sentence has been changed into “The negative results of SMFP determinations were not sufficiently to exclude non-MPM; on the other hand, the positive test results might be helpful in confirming MPM, suggesting that further invasive diagnostic steps might be necessary and could possibly lead to an earlier diagnosis.” Comment 6: Page 4: Under “strengths and limitations of this study”, the first sentence should read “The studies included in this meta-analysis were methodologically satisfactory and their results were consistent. Response 6: Revised. Comment 7: Page 8: Second sentence in paragraph 2 should read “The studies including at least 10 specimens were selected to be included in the meta-analyses, since very small studies may be vulnerable to selection bias”. Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com Response 7: Revised. Comment 8: Page 10, line 3: spelling of the word “Appendix” should be corrected. Response 8: “Appendix Table 1” has been changed into “Online supplementary appendix 2”. Comment 9: Page 12, 4th line from the bottom: replace the word “somehow” with “some”. Response 9: Replaced. Comment 10: Page 47: In the last column of the table for STARD checklist for reporting of studies of diagnostic accuracy, what does A/N mean? Did the authors intend to write N/A (not applicable)? Response 10: Sorry, those were typos. Yes, the authors intended to write N/A (not applicable). VERSION 3 - REVIEW REVIEWER REVIEW RETURNED GENERAL COMMENTS Ioannis Pantazopoulos 4th Department of Respiratory Medicine, Sotiria General Hospital, Athens, Greece 06-Jan-2014 Thank you very much for giving me the opportunity to review this manuscript. The authors have investigated the diagnostic accuracy of mesothelin family proteins for the diagnosis of malignant pleural mesothelioma. Regarding the manuscript itself: 1. When referring to both mesothelin and MPF I would suggest using the term “mesothelin family proteins” instead of SMRP (soluble mesothelin related peptides). SMRP better defines the three isoforms of “serum mesothelin” which can enter the blood circulation, either by shedding of the membrane bound portion (variants 1 and 2), or by a frameshift mutation (variant 3). 2. The manuscript is generally written in acceptable English but I advice some editing by a native speaker. 3. Introduction section, page 7, third line “…our results showed that serum SMRP determinations played a role in the diagnosis of MPM”. Please change to…could play a role in the diagnosis of MPM if interpreted in parallel with clinical findings and the results of conventional tests. 4. Materials and methods, diagnostic accuracy section, page 12 second paragraph first line: “Figure 2B shows forest plot of sensitivity and specificity 12 PF SMRP studies.” It should be …specificity for 12 PF … 5. Discussion section, page 15, second paragraph, line 6: “However, the relative low sensitivity, especially serum SMRPs, that was not sufficiently low to exclude non-MPM when a patient‟s SMRP results were lower than the cut-off values. Therefore, the associated poor sensitivity of SMRPs clearly limits their added value to diagnosis of MPM”. Something is wrong here. A positive mesothelin test at a high-specificity threshold would provide a strong incentive to urge ensuing diagnostic steps. On the other hand, the low sensitivity will not allow exclusion of non-MM patients even if patients have mesothelin concentrations lower than the cutoff value. Please correct. 6. I agree with the authors that the application of mesothelin family proteins in the near future clinical practice will most probably be situated in monitoring response to therapy, rather than in guiding Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com diagnostic decisions and risk assessment of asbestos-exposed populations. Needless to say that the MESOMARK assay has not been approved for diagnostic use, but as an aid in the monitoring of epithelioid and biphasic MM. However, as the initial aim of this systematic review was to investigate the “diagnostic accuracy” of mesothelin family proteins for the diagnosis of malignant pleural mesothelioma, the last paragraph should be removed from the conclusion section and be placed in the discussion section. VERSION 3 – AUTHOR RESPONSE Comment 1: When referring to both mesothelin and MPF I would suggest using the term “mesothelin family proteins” instead of SMRP (soluble mesothelin related peptides). SMRP better defines the three isoforms of “serum mesothelin” which can enter the blood circulation, either by shedding of the membrane bound portion (variants 1 and 2), or by a frameshift mutation (variant 3). Response 1: I tried to use the term “mesothelin family proteins” instead of SMRP (soluble mesothelin related peptides) when referring to both mesothelin and MPF in the new revision. Comment 2: The manuscript is generally written in acceptable English but I advice some editing by a native speaker. Response 2: We have tried our best to use correct English. Comment 3: Introduction section, page 7, third line “…our results showed that serum SMRP determinations played a role in the diagnosis of MPM”. Please change to…could play a role in the diagnosis of MPM if interpreted in parallel with clinical findings and the results of conventional tests. Response 3: Changed. Comment 4: Materials and methods, diagnostic accuracy section, page 12 second paragraph first line: “Figure 2B shows forest plot of sensitivity and specificity 12 PF SMRP studies.” It should be …specificity for 12 PF … Response 4: Corrected. Comment 5: Discussion section, page 15, second paragraph, line 6: “However, the relative low sensitivity, especially serum SMRPs, that was not sufficiently low to exclude non-MPM when a patient‟s SMRP results were lower than the cut-off values. Therefore, the associated poor sensitivity of SMRPs clearly limits their added value to diagnosis of MPM”. Something is wrong here. A positive mesothelin test at a high-specificity threshold would provide a strong incentive to urge ensuing diagnostic steps. On the other hand, the low sensitivity will not allow exclusion of non-MM patients even if patients have mesothelin concentrations lower than the cutoff value. Please correct. Response 5: Corrected. Comment 6: I agree with the authors that the application of mesothelin family proteins in the near future clinical practice will most probably be situated in monitoring response to therapy, rather than in guiding diagnostic decisions and risk assessment of asbestos-exposed populations. Needless to say that the MESOMARK assay has not been approved for diagnostic use, but as an aid in the monitoring of epithelioid and biphasic MM. However, as the initial aim of this systematic review was to investigate the “diagnostic accuracy” of mesothelin family proteins for the diagnosis of malignant pleural mesothelioma, the last paragraph should be removed from the conclusion section and be placed in the discussion section. Response 6: The last paragraph has been removed from the conclusion section and been placed in the discussion section. Downloaded from http://bmjopen.bmj.com/ on June 18, 2017 - Published by group.bmj.com Diagnostic values of soluble mesothelin-related peptides for malignant pleural mesothelioma: updated meta-analysis Ai Cui, Xiao-Guang Jin, Kan Zhai, Zhao-Hui Tong and Huan-Zhong Shi BMJ Open 2014 4: doi: 10.1136/bmjopen-2013-004145 Updated information and services can be found at: http://bmjopen.bmj.com/content/4/2/e004145 These include: Supplementary Supplementary material can be found at: Material http://bmjopen.bmj.com/content/suppl/2014/02/24/bmjopen-2013-004 145.DC1 References This article cites 54 articles, 18 of which you can access for free at: http://bmjopen.bmj.com/content/4/2/e004145#BIBL Open Access This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 3.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. 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