Plant Physiology Preview. Published on December 17, 2015, as DOI:10.1104/pp.15.01400 1 Research area: Cell biology 2 3 Article type: Research report 4 5 Short title: 6 UV avoidance behavior of the nucleus 7 8 Corresponding author details: 9 Prof. Ikuko Hara-Nishimura 10 Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan 11 Tel.: +81 (75) 753-4142; Fax: +81 (75) 753-4142 12 E-mail: [email protected] 13 1 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. Copyright 2015 by the American Society of Plant Biologists 14 15 Plant nuclei move to escape ultraviolet-induced DNA damage and cell death1[W] 16 17 Kosei Iwabuchi, Jun Hidema, Kentaro Tamura, Shingo Takagi, and Ikuko 18 Hara-Nishimura* 19 20 Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (K.I., 21 K.T, I.H-N.); Graduate School of Life Sciences, Tohoku University, Sendai 980-8577, 22 Japan (J,H); Graduate School of Science, Osaka University, Machikaneyama-cho 1-1, 23 Toyonaka, Osaka 560-0043, Japan (S.T.). 24 25 26 One-sentence summary: 27 In plant leaves exposed to ultraviolet B, nuclei are positioned to the side walls of cells in 28 an actin-dependent manner to mitigate DNA damage and cell death. 29 30 31 32 Footnote: 1 This work was supported by a Specially Promoted Research Grant-in-Aid for 33 Scientific Research to I.H-.N. (no. 22000014) and by Grants-in-Aid for Scientific 34 Research to K.I. (no. 23-1024), I.H.-N. (no. 15H05776), to J.H. (no. 23120502), S.T. 35 (no. 20570037), and K.T. (no. 20570036); from the Japan Society for the Promotion of 36 Science (JSPS). 37 * Address correspondence to [email protected]. 38 The author responsible for distribution of materials integral to the findings presented 39 in this article in accordance with the policy described in the Instructions for Authors 40 (www.plantphysiol.org) is: Ikuko Hara-Nishimura ([email protected]). 41 [W] The online version of this article contains Web-only data. 42 2 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 43 ABSTRACT 44 A striking feature of plant nuclei is their light-dependent movement. In 45 Arabidopsis thaliana leaf mesophyll cells, the nuclei move to the side walls of cells 46 within 1–3 h after blue-light reception, although the reason is unknown. Here, we show 47 that the nuclear movement is a rapid and effective strategy to avoid ultraviolet B 48 (UVB)-induced damages. Mesophyll nuclei were positioned on the cell bottom in the 49 dark, but sudden exposure of these cells to UVB caused severe DNA damage and cell 50 death. The damage was remarkably reduced in both blue-light-treated leaves and mutant 51 leaves defective in the actin cytoskeleton. Intriguingly, in plants grown under high-light 52 conditions, the mesophyll nuclei remained on the side walls even in the dark. These 53 results suggest that plants have two strategies for reducing UVB exposure: rapid nuclear 54 movement against acute exposure and nuclear anchoring against chronic exposure. 55 56 INTRODUCTION 57 Being sessile, plants are constantly exposed to strong light. One of the 58 mechanisms for coping with strong light is the relocation movement of organelles 59 (Wada and Suetsugu, 2004; Takagi et al., 2011; Griffis et al., 2014). The nuclei move to 60 the side walls of cells in response to strong light, a plant-specific phenomenon that is 61 conserved in vascular plants such as the fern Adiantum capillus-veneris (Tsuboi et al., 62 2007) and the seed plant Arabidopsis thaliana (Iwabuchi et al., 2007). In leaves of 63 Arabidopsis, nuclei of mesophyll and pavement cells are positioned at the center of the 64 cell bottom in the dark and relocate to the side walls within 1 h of continuous irradiation 65 with strong blue light (more than 50 µmol m-2 s-1) (Iwabuchi et al., 2007; Iwabuchi et al., 66 2010). 67 Analysis of Arabidopsis and Adiantum mutants indicated that the side-wall 3 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 68 nuclear positioning is regulated by the blue light receptor phototropin2 (Iwabuchi et al., 69 2007; Tsuboi et al., 2007; Iwabuchi et al., 2010). Moreover, pharmacological analysis 70 indicated that nuclear movement is dependent on the actin cytoskeleton (Iwabuchi et al., 71 2010). Recently, Higa et al. (2014) proposed a mechanism for moving nuclei to the side 72 walls in pavement cells of Arabidopsis: plastids attach to the nuclei (which cannot move 73 autonomously) and pull them toward the side walls. Plastids (chloroplasts) can 74 autonomously move toward any direction within cells according to the direction or 75 intensity of blue light (Tsuboi et al., 2009; Tsuboi and Wada, 2011; Wada, 2013). In 76 Arabidopsis, chloroplasts are positioned on the cell bottoms in the dark, and move to the 77 side walls in strong light. Chloroplast movement is also regulated by phototropins, the 78 actin cytoskeleton, and other proteins (Kong and Wada, 2014). 79 The mechanism of the dark-induced cell-bottom positioning of nuclei is different 80 from the mechanism of side-wall positioning. We reported that the cell-bottom 81 positioning of nuclei is regulated by the plant-specific motor myosin XI-i (Tamura et al., 82 2013). In myosin XI-i mutants, the cell-bottom positioning is aberrant but the side-wall 83 positioning occurs normally (Tamura et al., 2013). The actin cytoskeleton is also 84 required for the cell-bottom positioning (Iwabuchi et al., 2010). Thus, the dark-induced 85 positioning of nuclei is regulated by both myosin XI-i and actin cytoskeleton. 86 The physiological roles of the nuclear movement remain unknown. Ultraviolet B 87 (UVB) in sunlight (280-320 nm) damages nuclear DNA by directly producing 88 cyclobutane pyrimidine dimers (CPDs) and [6-4] photoproducts (Britt, 1996). These 89 photoproducts inhibit transcription and replication (Batista et al., 2009), and if the 90 damage cannot be repaired, cell death (apoptosis) occurs (Nawkar et al., 2013). 91 Eventually, UVB causes carcinogenesis in animals (Pfeifer and Besaratinia, 2012) and 92 growth inhibition and reduced crop yields in plants (Hidema and Kumagai, 2006). To 93 mitigate UV stress, plants have developed several protective mechanisms such as DNA 94 repair, pigmentation, and leaf thickening (Britt, 1996; Steyn et al., 2002). Here we 4 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 95 investigated whether nuclear movement is another UV-protection system. To this end, 96 we examined 1) the effect of UVB on a dominant-negative mutant (actin8D, also called 97 frizzy1) with a defect in actin polymerization (Kato et al., 2010), and 2) the effects of 98 high light conditions and field conditions on the positioning of nuclei. Our results 99 provide evidence for a new type of UV-protection in plants. 100 101 RESULTS AND DISCUSSION 102 Actin Cytoskeleton Differently Regulates Nuclear Movement in Mesophyll and 103 Pavement Cells 104 To confirm the involvement of the actin cytoskeleton in nuclear movement, we 105 used the actin8D, in which Glu-272 in the hydrophobic loop of ACTIN8 is replaced 106 with lysine, resulting in actin filament fragmentation (Kato et al., 2010). The 107 dark-induced-cell-bottom positioning of the nuclei was impaired in actin8D 108 palisade-mesophyll cells (Fig. 1, A and B, Dark-adapted): 57% of the actin8D nuclei 109 were aberrantly positioned on the side walls even in the dark (Fig. 1C, Mesophyll cells). 110 This result, together with the finding that myosin XI-i links the nuclear membrane and 111 actin filaments to control dark-induced nuclear positioning in palisade-mesophyll cells 112 (Tamura et al., 2013), indicates that the actin-myosin XI-i cytoskeleton drives nuclei to 113 the cell bottom during darkening. However, in actin8D pavement cells, 114 dark-induced-cell-bottom positioning was not substantially impaired (Fig. 1, Pavement 115 cells), suggesting involvement of actin cytoskeleton in the dark-induced nuclear 116 positioning depends on the cell type. On the other hand, in the presence of blue light, 117 the nuclear relocation to the side walls was completely impaired in actin8D pavement 118 cells (Fig. 1, Pavement cells), although the nuclear relocation was not able to be 119 determined in actin8D palisade-mesophyll cells because 57% of the nuclei were 120 positioned on the side walls before blue-light irradiation (Fig. 1, Mesophyll cells). 5 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 121 These results indicate that nuclear movement is regulated differently in mesophyll cells 122 and pavement cells (discussed below). 123 Side-wall Nuclear Positioning Protects Leaf Cells from UVB-induced Cell Death 124 The question is what are the physiological meanings of switching the nuclear 125 position within the cells. In spongy-mesophyll cells of dark-adapted leaves, the nuclei 126 moved to the topside (Fig. 2A), which is the opposite direction to that in 6 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 127 palisade-mesophyll cells. Similarly, the nuclear movements in pavement cells in 128 dark-adapted leaves were directed downwards in adaxial (upper) side of a leaf and 129 directed upwards in the abaxial (lower) side (Fig. 2A). Thus, plants in the dark tend to 130 position the nuclei on the side toward the body centre as if to keep genetic materials 131 farther from external environmental stresses. However, this nuclear positioning was 132 fatal to mesophyll cells under certain conditions. Irradiating dark-adapted cotyledons 133 with UVB at 2.5 W m−2 for 5 min (equivalent to midday sun) induced the death of 7 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 134 mesophyll cells (Supplemental Fig. S1). By contrast, UV-induced cell death was 135 noticeably suppressed in blue-light-treated cotyledons (Fig. 2B) and the dark-adapted 136 actin8D cotyledons (Fig. 2C), both of which positioned most mesophyll nuclei on the 137 side-walls of the cells (Fig. 1B). These results indicate that side-wall nuclear positioning 138 protects leaf cells from UV-induced cell death. 139 140 141 Side-wall Nuclear Positioning Mitigates DNA Damage to the Nuclei To quantitatively determine whether the side-wall nuclear positioning reduces 142 UV-induced DNA damage, blue-light-treated leaves and dark-adapted leaves were 143 irradiated with UVB for 5 min. UVB-induced DNA damage of the leaves was assessed 144 with an assay for CPDs, which were detected by immunostaining. In the 145 blue-light-treated mesophyll cells, 76% of the nuclei were positioned on the side walls 146 and their CPD levels were undetectable (Fig. 3A, right). By contrast, in the 147 dark-adapted mesophyll cells, only 8% of the nuclei were positioned on the side walls 148 and their CPD levels were high (Fig. 3A, left). Similar differences were observed in 149 pavement cells (Fig. 3B), while little difference was observed in guard cells, in which 150 the nuclei are less motile (Fig. 3C). To statistically analyze the correlation between 151 side-wall nuclear positioning and the UV-induced DNA damage, we used the leaves 152 treated with blue light for 0, 1, and 3 h, in which the side-wall nuclear-positioning rates 153 increased during the course of the blue-light treatment (Fig. 1B; Supplemental Fig. 154 S2A). The side-wall nuclear-positioning rates were negatively correlated with the CPD 155 amounts in mesophyll cells and in pavement cells (Fig. 3D). 156 Leaf nuclei are lens-shaped, so that the light-exposed surface area (the so-called 157 projection area) depends on the angle of incident light. A statistical analysis revealed 158 that the projection areas in pavement cells and mesophyll cells were negatively 159 correlated with the side-wall nuclear-positioning rates (Fig. 3E; Supplemental Fig. S2C). 8 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 160 These results suggest that the lens-shaped nuclei slide into the narrow space between the 161 plasma membrane and vacuolar membrane, and thereby the nuclear movement of nuclei 162 reduces DNA damage. Additionally, in mesophyll cells, nuclear movement causes them 163 to be shielded by chloroplasts (Fig. 1C). The nuclei might move with chloroplasts in a 164 way that reduces their light exposure because chloroplasts also exhibit a 165 blue-light-dependent side-wall positioning, which avoids the strong-light induced 166 stresses such as ROS generation (Kasahara et al., 2002; Wada et al., 2003). Pavement 9 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 167 cell nuclei are also hauled by the blue-light-dependent plastid (chloroplast) movement 168 (Higa et al., 2014). 169 To minimize the effect of the blue-light-dependent chloroplast movement on the 170 nuclear movement, we used the dark-adapted mesophyll cells of actin8D leaves, in 171 which chloroplasts were positioned on the cell bottoms as in the wild type (Fig. 1C). In 172 mesophyll cells, the side-wall nuclear-positioning rates were much higher in actin8D 173 than in the wild type (Fig. 3F). In addition, the nuclear projection areas (Fig. 3G) and 174 amounts of UVB-induced CPD (Fig. 3H) were lower in actin8D than in the wild-type. 175 Taken together, these results show that the side-wall nuclear positioning reduces the 176 amount of UVB-light that leaves receive, mitigating the DNA damage to the nuclei. 177 178 Side-wall Nuclear Positioning Is Associated with Light Conditions During Plant 179 Growth 180 Next, we examined the effects of ambient light conditions on nuclear positioning. 181 In plants grown under high-light conditions (200–220 µmol m−2 s−1) for 3 weeks, most 182 mesophyll nuclei remained on the side walls even in the dark, although in plants grown 183 under low-light condition (30-50 µmol m−2 s−1), most mesophyll nuclei remained on the 184 cell bottom in the dark (Fig. 4A). The side-wall nuclear-positioning rates of 185 high-light-grown plants remarkably increased in an incubation-time-dependent manner 186 (Fig. 4B). This was not the case with pavement nuclei (Fig. 4, A and B). The 187 high-light-grown plants exhibited blue-light-induced nuclear positioning in both cell 188 types (Supplemental Fig. S3, A and B). As expected, in Arabidopsis plants grown at a 189 sunny spot in the field, most mesophyll nuclei remained on the side walls in the dark 190 (Fig. 4, C and D). Hence, in sun leaves, the nuclei do not relocate from the side walls to 191 the cell bottoms during darkening in order to prepare for sunlight the next day, while in 192 shade leaves the nuclei relocate to the side walls to reduce their exposure to UVB light 10 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 193 194 (Fig. 4E). The present study provides two modes of UVB avoidance behavior of plant 195 nuclei: Mode I is for plants grown in the low light and Mode II is for plants grown in 196 the sun (Fig. 4E). In Mode I, pavement nuclei are located on the cell bottom in the dark 197 (Iwabuchi et al., 2007), relocated rapidly to the side walls during light irradiation 198 depending on actin (this study; Iwabuchi et al., 2010) and plastid movements (Higa et 199 al., 2014), and then move back to the cell bottom during dark adaptation depending on 11 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 200 actin (Iwabuchi et al., 2010) and an actin-myosin XI-i cytoskeleton (Tamura et al., 201 2013). On the other hand, mesophyll nuclei are anchored on the center of the cell 202 bottom depending on actin (this study) and an actin-myosin XI-i cytoskeleton (Tamura 203 et al., 2013). Nuclear movements during both light irradiation and dark adaptation 204 depend on actin (Iwabuchi et al., 2010), but not on myosin XI-i (Tamura et al., 2013). A 205 significant difference between Mode I and Mode II is the mesophyll nuclear positioning 206 in the dark: nuclei are anchored on the cell bottom in Mode I, while nuclei locate on the 207 side walls in Mode II. This result suggests that the actin-and-myosin XI-i system for the 208 cell-bottom nuclear anchoring is not functional under the high-light conditions. 209 Swichtching nuclear positions through the acin-and-myosin-XI-i system could be 210 important for adaptation to environments in plants. 211 Other methods, also induced by blue light, were reported to reduce the amount of 212 UVB light received by leaves: accumulation of the UVB-absorbing pigment 213 anthocyanin (Ahmad et al., 1995) and thickening of leaves (Lopez-Juez et al., 2007). 214 However, accumulating sufficient amounts of anthocyanin required more than 12 h of 215 continuous blue-light irradiation (Supplemental Fig. S4A) and leaf thickening required 216 more than 50 h (Supplemental Fig. S4B). Therefore, these two responses are too slow to 217 avoid UVB injury. In contrast, nuclear relocation to the side wall requires only 1-3 h of 218 blue-light irradiation (Fig. 1B). Nuclear relocation is an effective and rapid strategy to 219 avoid UVB-induced damage and cell death. However, UVB had no ability to induce 220 nuclear relocation, although UVA with a longer wavelength (320–400 nm) induced it 221 within 3-h irradiation (Supplemental Fig. S6). Thus, plants might use blue/UVA light as 222 an indicator of the presence of UVB. This is consistent with the result that the 223 side-wall-nuclear-positioning is regulated by the blue/UVA photoreceptor phototropin 2 224 (Iwabuchi et al., 2007; Iwabuchi et al., 2010). Sessile plants might have developed such 225 nuclear positioning strategies to overcome their inability to move away from excess 226 light and to survive fluctuating environmental conditions. 227 12 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 228 MATERIALS AND METHODS 229 Plants and Growth Conditions 230 Arabidopsis thaliana ecotype Columbia was used as the wild-type plant and the 231 actin8D mutant (Kato et al., 2010) was in the Columbia background. Seeds were sown 232 on compost and grown for 1–5 weeks at 22°C under conditions of 16 h white light (30– 233 50 µmol m-2 s-1 or 200–220 µmol m-2 s-1) and 8 h dark. Unless otherwise stated, 4– 234 5-week-old plants or 7-day-old seedlings grown under 30–50 µmol m-2 s-1 light were 235 used. The wild Arabidopsis thaliana (ecotype unknown) was harvested from 236 Kamogawa river in Japan. 237 Dark and Light Treatments 238 For dark treatment, detached leaves placed on GM plates (half-strength MS salts, 239 0.025% MES-KOH, pH 5.7, and 0.5% Gellan gum) or seedlings on soil were placed in 240 the dark for 16-24 h. For light treatment, samples were irradiated with 100 µmol m-2 s-1 241 blue light (470 nm) or 30 µmol m-2 s-1 red light (660 nm) using an LED light source 242 system (IS-mini; CCS). For UVB irradiation, 15 W m-2 UVA and 2.5 W m-2 UVB were 243 applied for 5 min or 3 h using UVA and UVB sources (FL20SBLB, FL20SE; Toshiba). 244 Light intensity was measured using a quantum sensor (LI-190SA; LI-COR) or a UVB 245 sensor (SD204cos; LI-COR). 246 Nuclear Staining 247 Samples were fixed in fixation buffer (50 mM PIPES, 10 mM EGTA, and 5 mM 248 MgSO4, pH 7.0) containing 2% formaldehyde and 0.3% glutaraldehyde for 1 h. Fixed 249 samples were stained with 5 µg/mL Hoechst 33342 (CalBiochem), diluted in fixation 250 buffer supplemented with 0.03% Triton X-100 for 1.5 h. 251 Nuclear Area Measurement 252 After nuclear staining, cells on the adaxial side were imaged using a fluorescence 253 microscope (Axioskop 2 plus; Zeiss) equipped with a charge-coupled device (CCD) 254 camera (VB-7010; Keyence). To determine the nuclear projection area, Hoechst-stained 255 images, which had been converted to 32-bit grayscale images, were binarized, their 256 nuclei were outlined and their surface area was determined using Image J 257 (http://rsb.info.nih.gov/ij). 13 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 258 259 Leaf Thickness Measurement Fixed leaves were cut into approximately 3 × 5 mm pieces and samples were 260 embedded in 5% agar. Transverse 200 µm-thick sections were prepared using a 261 vibrating blade microtome (VT1000; Leica). Sections were stained with Hoechst as 262 described for nuclear staining and then with 0.2 µg/mL Calcofluor White 263 (Sigma-Aldrich) for 10 min. Sections were observed using a fluorescence microscope 264 (Axioskop 2 plus) or a confocal laser scanning microscope (LSM780 META; Zeiss). 265 The thickness of three regions in each section was determined using Image J and the 266 mean of these three measurements was calculated as the thickness of the leaf. 267 Anthocyanin Content Measurement 268 The leaf anthocyanin content was determined as reported previously (Zhang et al., 269 2011). The fresh weight of each leaf was measured using an electronic balance 270 (XS105DU; Mettler Toled). The absorbance at 530 nm of sample solutions was 271 measured using a plate reader (Infinite 200 PRO; Tecan). The amount of anthocyanin 272 was expressed as absorbance at 530 nm per gram of leaf fresh weight. 273 Immunofluorescence Microscopy 274 After UVB irradiation, leaves were fixed as described for nuclear staining. Before 275 fixation, leaves were placed in the dark for 28 h so that all nuclei were positioned at the 276 bottom. This was important because the immunofluorescence signal might be 277 influenced by the position of the nuclei. For actin8D mutant analysis, leaves were 278 centrifuged at 13,000 × g for 1 min to artificially relocate nuclei to the bottom 279 (Supplemental Fig. S5). After fixation, leaves were cut into two pieces of approximately 280 5 × 10 mm and fixed to a cover glass with the adaxial side facing upwards using 281 cyanoacrylate glue (Konishi). Samples were further cut into pieces of approximately 1 × 282 1 mm on the cover glass and digested with fixation buffer containing 1% Cellulase 283 “Onozuka” RS (Yakult) and 0.1% Pectolyase Y-23 (Kyowa Chemical Products) for 5 284 min at 37°C. The adaxial layer was detached from the cover glass and further digested 285 for 1 min. Samples were permeabilized with fixation buffer containing 0.5% Triton 286 X-100 for 1 h and blocked in fixation buffer containing 20% fetal bovine serum 287 (Thermo Scientific) for 1 h. 14 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 288 To label CPDs, samples were immunostained with the mouse monoclonal primary 289 TDM-2 antibody (Cosmo Bio; diluted 1:500) at 37°C overnight and with 290 Alexa-488-conjugated anti-mouse IgG (Invitrogen; diluted 1:500) for 3 h. Antibodies 291 were diluted in fixation buffer supplemented with 5% fetal bovine serum. Nuclei were 292 stained with fixation buffer containing 5 µg/mL Hoechst 33342 for 15 min in the dark. 293 Each specimen was mounted on a glass slide with 0.1% p-phenylenediamine diluted in 294 13 mM NaCl, 0.51 mM Na2HPO4, 0.16 mM KH2PO4 (pH 9.0–9.5 with KOH), and 50% 295 glycerol, and observed with a fluorescence microscope (Axioskop 2 plus). The exposure 296 time was 0.04 s. Images of Hoechst staining and CPD staining were acquired for each 297 nucleus. The mean signal intensity of each nucleus was determined using Image J. 298 Hoechst-stained images that had been converted to 32-bit grayscale were binarized and 299 nuclei were outlined. The extracted outlines were overlaid onto the corresponding 300 CPD-stained images, and the mean signal intensity within each outline was measured. 301 The CPD signal intensity of each UVB-irradiated nucleus was subtracted from the 302 average intensity of non-UVB-irradiated nuclei. The net intensity of the CPD signal in 303 the nucleus of each cell type was expressed relative to the fluorescent intensity of CPDs 304 in the nucleus of a pavement cell that had undergone dark treatment followed by UVB 305 irradiation. Heat-maps of CDP levels were created using the Image J plug-in HeatMap 306 Histogram (http://www.samuelpean.com/heatmap-histogram/). 307 Cell Death Measurement 308 Seedlings were irradiated with 2.5 W m-2 UVB for 5 min and then with 30 µmol m-2 309 s-1 red light for 5 days. Emitted light with a wavelength of 491–552 nm (488 nm 310 excitation) was defined as autofluorescence of dead cells. Staining with trypan blue, 311 which has intrinsic fluorescence in the far-red region of the spectra(Mosiman et al., 312 1997), was performed as described previously (Kim et al., 2008). To quantify dead cells, 313 each trypan-blue-stained cotyledon was scanned from the upper to lower surface with a 314 confocal microscope (LSM780; 610–758 nm emission, 488 nm excitation). The 315 maximum intensity projection image of each cotyledon was binarized, and the total 316 surface area of dead cells per leaf area was determined using Image J. 317 Statistics 15 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 318 319 All data with error bars are represented as mean ± s.e. by using StatPlus. The P-values were determined with unpaired Student’s t-test. 320 321 Sequence data from this article can be found in the GenBank/EMBL data libraries under 322 accession number ACTIN8, At1g49240. 323 324 Supplemental Data 325 The following data are available in the online version of this article. 326 Supplemental Figure S1. Detection of UVB-induced cell death in mesophyll cells. 327 Supplemental Figure S2. Nuclear positioning on the side walls, nuclear projection 328 329 330 331 area, and UVB-induced DNA damage in nuclei after blue-light irradiation. Supplemental Figure S3. Distribution of nuclei in leaves of plants grown under various light conditions. Supplemental Figure S4. Changes in leaf thickness and accumulation of the 332 UV-absorbing pigment anthocyanin during blue light treatment for UV protection. 333 Supplemental Figure S5. Distribution of nuclei in mesophyll, pavement, and guard 334 335 336 cells before and after centrifugation of leaves. Supplemental Figure S6. Different irradiation effects of UVA and UVB on nuclear positioning. 337 338 339 ACKNOWLEDGMENTS We are grateful to Masao Tasaka (Nara Institute of Science and Technology) for his 340 donation of actin8D and to Tobias Baskin (University of Massachusetts) and James 341 Raymond (Eigoken) for critical readings of this manuscript. 342 343 344 345 AUTHOR CONTRIBUTIONS K.I. and I.H.-N. designed the project. K.I. performed all experiments. K.T., J.H., and S.T. discussed the project and data. K.I. and I.H.-N. wrote the paper. 16 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 346 FIGURE LEGENDS 347 Figure 1. Nuclear positioning in mesophyll and pavement cells after dark 348 adaptation and blue-light irradiation in a dominant-negative mutant of ACTIN8. 349 A, Cross sections of dark-adapted and 3-h-blue-light treated leaves of wild type and 350 actin8D (a dominant-negative mutant of ACTIN8). Blue, cell walls stained with 351 Calcofluor White; magenta, chloroplast autofluorescence; green (arrowheads), nuclei 352 stained with Hoechst 33342. B, Pavement and mesophyll cells of wild-type and actin8D 353 leaves after dark adaptation and 3-h-blue-light treatment. Cells are outlined with yellow 354 dotted lines. Nuclei stained with Hoechst 33342 are shown in blue. C, Side-wall 355 nuclear-positioning rates of pavement and mesophyll cells of wild-type and actin8D 356 leaves after blue-light irradiation. Data represent mean ± SEM (n = 5 leaves, *P < 0.05, 357 **P < 0.01). 358 359 Figure 2. Significant reduction of UVB-induced cell death in blue-light treated 360 cotyledons and actin8D cotyledons. A, Cross-section of a dark-adapted leaf of a 361 3-week-old plant. Blue, cell walls stained with Calcofluor White; magenta, chloroplast 362 autofluorescence; green (arrowheads), nuclei stained with Hoechst 33342. B, A set of 363 the dark-adapted and 3-h-blue-light-treated cotyledons were irradiated with UVB for 5 364 min (+ UVB) and unirradiated (- UVB). Dead cells were stained with trypan blue. Bars, 365 1 mm. Data of dead cells represent mean ± SEM (n = 5–7 leaves, **P < 0.01). C, A set 366 of the dark-adapted wild-type and actin8D cotyledons were irradiated with UVB for 5 367 min (+ UVB) and unirradiated (- UVB). Dead cells were stained with trypan blue. Bars, 368 1 mm. Data of dead cells represent mean ± SEM (n = 5–6 leaves, **P < 0.01). 369 370 Figure 3. UVB-induced DNA damage is negatively correlated with nuclear 371 positioning on the side walls. A-C, Mesophyll (A), pavement (B), and guard cells (C) 372 after dark adaptation and 3-h-blue-light treatment are shown together with nuclei 373 stained with Hoechst 33342 (blue) and the side-wall nuclear-positioning rates (%, mean 374 ± SEM). See Supplemental Fig. S2 for original data. A nucleus stained with Hoechst 375 33342 (nucleus) and a heat-map visualization of the UVB-induced CPD amounts (CPD). 376 See METHOD SUMMARY for details. Bars, 20 µm. D, Negative correlations between 17 Downloaded from on June 18, 2017 - Published by www.plantphysiol.org Copyright © 2015 American Society of Plant Biologists. All rights reserved. 377 UVB-induced CPD amounts and side-wall nuclear-positioning rates in mesophyll and 378 pavement cells. See Supplemental Fig. S2A and 2B for original data. Linear 379 regressions: y = -0.5583x + 58.759 and R² = 0.8014 for mesophyll cells; y = -1.3465x + 380 128.42 and R² = 0.9612 for pavement cells; y = 2.9351x + 59.02 and R² = 0.98489 for 381 guard cells. E, Negative correlations between nuclear projection areas and side-wall 382 nuclear-positioning rates in mesophyll and pavement cells. See Supplemental Fig. S2A 383 and 2C for original data. Linear regressions: y = -0.4514x + 67.242 and R² = 0.99615 384 for mesophyll cells; y = -0.4353x + 52.71 and R² = 0.993 for pavement cells; y = 385 -0.1148x + 9.5488 and R² = 0.0248 for guard cells. F-H, side-wall nuclear-positioning 386 rates (F), nuclear projection area (G), and CPD amount (H) of the dark-adapted 387 mesophyll cells of wild-type and actin8D leaves. See MATERIALS AND METHODS 388 and Supplemental Fig. S5 for details. Data represent mean ± SEM (upper, n = 5 leaves, 389 **P < 0.01; middle, n = 5 leaves, **P < 0.01; bottom, n = 5 leaves, *P < 0.05, **P < 390 0.01). 391 392 Figure 4. Positioning of nuclei on the side walls is associated with light conditions 393 during plant growth. A-D, Effects of light conditions on nuclear positioning in 394 mesophyll and pavement cells of dark-adapted leaves. Plants were grown for 3 weeks 395 under the light conditions indicated (A, B) and grown in the sun (C, D). Nuclei 396 (arrowheads), chloroplasts (magenta), and cell walls (blue) are shown in left panels. 397 Cells outlined with yellow dotted lines and nuclei stained with Hoechst (blue) are 398 shown in right panels. Bars, 20 µm. Side-wall nuclear-positioning rates in the 399 dark-adapted leaves are shown for plants grown for 1–3 weeks under the light 400 conditions indicated (mean ± SEM, n = 5 leaves, *P < 0.05, **P < 0.01) (B), and are 401 shown for four independent plants grown in the sun (D). E, Two modes of UVB 402 avoidance behavior of plant nuclei. Mode I is for low-light-acclimated plants in shade 403 and Mode II is for high-light-acclimated plants in the sun. Shown are involvements of 404 actin and myosin XI-i in each step of nuclear anchoring on the cell bottom in the dark, 405 side-wall nuclear-positioning during light irradiation, and nuclear movement to the cell 406 bottom during dark adaptation. 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