Studies Towards a Scalable Second-Generation Total Synthesis of the Aplyronines as Novel Payloads for Antibody-Drug Conjugates! Nika Anžiček, Simon Williams, Michael P. Housden and Ian Paterson! University Chemical Laboratory, Lensfield Road, Cambridge, CB2 1EW, UK! E-mail: [email protected]! 1. Introduction 2. Retrosynthesis O •" The aplyronines (A-H) comprise a family of structurally complex and extremely scarce marine macrolides isolated from the Japanese sea hare Aplysia kurodai by Yamada.1" Me2N OH O 7 O OH O MeO boron aldol, dehydration, reduction OMe 14 O Yamaguchi macrolactonisation O O O TESO 23 N OH C28−C34 side chain (B) 1 O O OMe Ba(OH)2-mediated HWE OMe OAlloc C15−C27 aldehyde (C) C1−C14 phosphonate (A) antibody Cys Aplyronine A-actin complex tBu BnO O O Sn(OTf)2, Et3N CH2Cl2, −78 °C OTIPS + H BnO OH 21 88%, 9:1 dr O OTIPS O 27 23 O tBu Si O OTIPS H Ba(OH)2-mediated HWE9 78% over 4 steps tin(II)-mediated aldol7 (TS-I) TBSO PMP O CO2H OH O O OH tBu 1 OTIPS O 4. C15−C27 Aldehyde Synthesis O H 1. SmI2, EtCHO, −20 °C 2. TESOTf, 2,6-lutidine, −78 °C 3. DIBALH, −78 °C 3,4-syn Ti(OiPr)Cl3, iPr2NEt CH2Cl2, −78 °C OBn PMBO 21 82%, 12:1 dr OH O OBn 27 23 titanium-mediated aldol reaction8 (TS-II) improved dr and scalability PMBO OH OTES O O 1. TCBC, Et3N, DMAP (60% of 26m macrocycle) 2. Ti(OiPr)4, CH2Cl2 (1:3 26m : 24m) 3. HF (40% aq. sol.) 4. TESOTf, 2,6-lutidine 5. 4:1:1 THF:AcOH:H2O 42% over 5 steps OBn 89%, >95:5 dr 1. DDQ 2. DIBALH, −78 °C 3. Dess−Martin periodinane 52% O P(OMe)2 15 OMe C15−C20 phosphonate (E) O PMBO OTES TESO OMe OBn 20 1. (S)-Me CBS catalyst, BH3•SMe2, −20 °C 2. NaH, MeI O Ba(OH)2, 40:1 THF:H2O 27 15 88%, >95:5 E:Z OTIPS 27 1 O 28 TES O 15 OMe •" lack of protecting group orthogonality 34 O CHO TES TESO O 27 Ba(OH)2-mediated HWE Me OAc N TES TESO 1 O O 27 3. Burgess reagent 4. [CuH⋅PPh3]6, wet PhH 56% over 4 steps OMe MeO OTES OBn TESO OMe PMBO H OTES stronger chelation of the electron-rich OBn to the more Lewis-acidic titanium leads to better selectivity of the aldol H PMBO Me Me MeO O Me TS-I OBn O H SnOTf O H 1. THF:AcOH:H2O (5:2:1) 2. DMP 90% H OTIPS BnO OAlloc 57% O TiLn OMe PMBO OTES 27 H O 15 OAlloc OH O 9 7 O 1 O Me2N R O O OH 23 •" 29 steps LLS, 1.6% overall (vs. Yamada 47 LLS, 0.39% yield)" orthogonal protecting groups at C23, C25 and C27 MeO Me OAc 29 yield5 C15−C27 aldehyde (C) Me TS-II O Me2N CHO NMe2 , DCC, HO DMAP•HCl R 3. HF•py, py 4. N,N,O-trimethylserine, TCBC DMAP, Et3N 30% over 4 steps H 34 1. Zn(BH4)2, 0 °C 2. O OMe C21−C27 aldehyde (D) 10 steps, 38% yield 1. LiDBB, −78 °C 2. allyl chloroformate, CH2Cl2:pyr (1:1) Me OAc N 23 OH OBn MeO O OTES C28−C34 ketone (B) 23 PMB OTES 21 91%, >95:5 dr PMBO O 1. (COCl)2, DMSO, Et3N 2. cHex2BCl, Et3N, −78 °C O 27 H O + P(OEt)2 H O 20 TESO 14 tBu Si O 1,4-syn TESO O 45% over 6 steps 14 MeO P(OMe)2 Ba(OH)2 40:1 THF:H2O OTBS O 27 23 O 20 PMP 1 O 15 78% over 5 steps + OTES 15 H 3. First-Generation Total Synthesis S •" An efficient and scalable total synthesis is required to access viable quantities of suitably modified aplyronines incorporating a linker for conjugation to selected antibodies." O PMBO 27 P(OMe)2 14 O CHO 34 OTBS OTES CHO 34 •" The aplyronine side chain intercalates into a hydrophobic cleft of actin with both amino acid residues protruding into the bulk solvent region.4 This allows for attachment to antibodies through amino acid modification without foreseeable loss of actin binding ability." PMBO Me OAc N OTES 27 14 NMe2 28 1 O O DMGly = NMe2 TES TESO N n O DMAla = NMe2 O OMe O TMSer = Me OAc 29 23 MeO H C1−C27 macrocyclic alcohol 1 O N O MeO Me2N O Aplyronine A1 R1 = TMSer R2 = DMAla Aplyronine C1 R1 = H R2 = DMAla Aplyronine D1 R1 = TMSer R2 = DMGly Me OAc 34 alkylation MeO O R2O OH 27 •" It forms an unprecedented heterotrimeric complex with its cellular targets, cytoskeletal proteins actin and tubulin, disrupting cell division. This novel dual mode of action makes it an exciting payload candidate for a new class of antibody-drug conjugates for targeted cancer chemotherapy.4" MeO O 23 •" Aplyronine A exhibits potent biological activity in vivo2 and picomolar cancer cell growth inhibition against the NCI 60 cell line panel.3" Aplysia kurodai 1 OR1 HO N 34 CHO R = Me Aplyronine A R = H Aplyronine D OMe • first total synthesis of aplyronine D esterification occurs exclusively on the C7 alcohol in the challenging final step 5. C1−C14 Phosphonate Synthesis 3,4-anti PMBO O O + CO2Me cHex 2BCl, Et3N Et2O, 0 °C PMBO O 11 H 86% over 4 steps 6. Completion of the Macrocycle and Conclusions 1 OH CO2Me TESO 7 87%, >95:5 dr OTES 1,4-syn 85% 1. SmI2, EtCHO, −20 °C 2. PPh3, PhOH 3. K2CO3, MeOH 14 O OTES 1. TESOTf, 2,6-lutidine, −78 °C 2. DDQ, CH2Cl2−pH 9.2 buffer (4:1) 2. I2, PPh3, imid. O OH H O OTBS 75% OMe OTES PMB OTBS CO2H OH O OTES O 14 P(OEt)2 C1−C14 phosphonate (A) Me H Me H 1. NaH, MeI 2. DDQ, 1:1 DCM:pH 7 buffer 3. NaClO2, NaH2PO4⋅H2O, 2-methyl-2-butene, H2O, tBuOH TES TESO O OTBS PMB O OTES OAlloc formyl H-bond O 1 O (R)-Me CBS catalyst, BH3•SMe2, −5 °C OMe TES TESO NaH, nBuLi, HMPA, 0 °C 85% I 14 O 15 OAlloc TESO 1 11 OAlloc 37% (99% BRSM) O P(OEt)2 OTES Ba(OH)2, 40:1 THF:H2O OMe PMBO TESO OAlloc O 67% 97% + O OH OMe I 1. DIBALH, −78 °C 2. TBSOTf, 2,6-lutidine, −78 °C OTES 27 P(OEt)2 O 27 PMBO O OTBS PMB 1 O OTES TES TESO 1 boron-mediated aldol reaction (TS-III) TESO OTBS c-Hex O MeO OMe HO B O c-Hex 1. TCBC, Et3N, DMAP 2. Pd(PPh3)4, dimedone H TS-III O OMe •" synthesised multi-gram quantities of the C21−C27 aldehyde (D) via the revised route, successfully substituting the tin(II) for titanium(IV) aldol" TES TESO 1 O O OTES 27 7. References 1 2 3 4 5 6 7 8 9 (a) Yamada, K.; Makoto, O.; Ishigaki, T.; Yoshida, Y. J. Am. Chem. Soc. 1993, 115, 11020; (b) Yamada, K.; Ojika, M.; Kigoshi, H.; Suenaga, K. Nat. Prod. Rep. 2009, 26, 27; (c) Ojika. M.; Kigoshi, H.; Suenaga, K.; Imamura, Y.; Yoshikawa, K.; Ishigaki, T.; Sakakura A.; Mutou, T.; Yamada, K. Tetrahedron 2012, 68, 982" (a) Ojika, M.; Kigoshi, H.; Yoshida, Y.; Ishigaki, T.; Nisiwaki, M.; Tsukada, I.; Arakawa, M.; Ekimoto, H.; Yamada, K. Tetrahedron 2007, 63, 3138 " Dr David Newman, NCI, personal communication to Prof Ian Paterson" (a) Saito, S.; Watabe, S.; Ozaki, H. J. Biochem. 1996, 120, 552; (b) Hirata, K.; Muraoka, S.; Suenaga, K.; Kuroda, T.; Kato, K.; Tanaka, H.; Yamamoto, M.; Takata, M.; Yamada, K.; Kigoshi, H. J. Mol. Biol. 2006, 356, 945; (c) Kuroda, T.; Suenaga, K.; Sakakura, A.; Handa, T.; Okamoto, K.; Kigoshi, H. Bioconjug. Chem. 2006, 17, 524; (d) Kita, M.; Hirayama K.; Yoneda, K.; Yamagishi, K.; Chinen, T.; Usui, T.; Sumiya, E.; Uesugi; Kigoshi, H. J. Am. Chem. Soc. 2013, 135, 18089" (a) Paterson, I.; Fink, S. J.; Lee, L. Y. W.; Atkinson, S. J; Blakey, S. B. Org. Lett. 2013, 15, 3118 (b) Williams S., Paterson, I., manuscript in preparation" (a) Paterson, I.; Woodrow, M. D.; Cowden, C. J. Tetrahedron Lett. 1998, 39, 6041; (b) Paterson, I.; Cowden, C. J.; Woodrow, M. D. Tetrahedron Lett. 1998, 39, 6037" Paterson, I.; Tillyer, R. D. Tetrahedron Lett. 1992, 33, 4233" Solsona, J. G.; Nebot, J.; Romea, P.; Urpí, F. J. Org. Chem. 2005, 70, 6533" Paterson, I.; Yeung, K.-S.; Smaill, J.B. Synlett. 1993, 774" 23 MeO OH •" altered the protecting group strategy to enable sitespecific macrolactonisation and convergence on to a known intermediate" OMe known intermediate from the first-generation route O Me OAc N known endgame5 28 aplyronine A, C, D •" prepared the C15−C20 phosphonate (E) using a highly enantioselective pig liver esterase mediated desymmetrisation on 15 g scale" 34 CHO •" future work will involve completion of the secondgeneration total synthesis, synthesis of macrocycle analogues and investigation of linker strategies to produce ADCs We thank Drs Cam Cowden, Michael Woodrow, Simon Blakey, Lydia Lee, Stephen Atkinson and Sarah Fink for their contributions to the first-generation total synthesis of the aplyronines; the EPSRC for support and the National Mass Spectrometry Facility for providing mass spectroscopy data; the Slovene Human Resources Development and Scholarship Fund (NA), the Todd–Raphael Scholarship (SW) and the Isaac Newton–Mays Wild Fellowship from Downing College (MPH)."
© Copyright 2026 Paperzz