Eastern Illinois University The Keep Masters Theses Student Theses & Publications 1-1-2014 Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL Ryan Patrick Hastings Eastern Illinois University This research is a product of the graduate program in Biological Sciences at Eastern Illinois University. Find out more about the program. Recommended Citation Hastings, Ryan Patrick, "Effects of Dams on Fish and Macroinvertebrate Communities in the Vermilion River, IL" (2014). Masters Theses. Paper 1264. http://thekeep.eiu.edu/theses/1264 This Thesis is brought to you for free and open access by the Student Theses & Publications at The Keep. It has been accepted for inclusion in Masters Theses by an authorized administrator of The Keep. For more information, please contact [email protected]. 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Date: Reasons: 61J_/ Date This form must be submitted in duplicate. http://www.ei u .edu/graduate/forrns/thesisreproductioncert.html 5/21/2014 EFFECTS OF DAMS ON F I S H AND MACROINVERTEBRATE COMMUNITIES IN THE VERMILION RIV ER, I L BY Ryan Patri ck Hastings THESIS S U B MITTED IN PARTIAL F U LF IL L MENT OF THE REQUI REMENTS FOR THE DEGREE OF MASTE R OF SCIENCE - B I OLOGICAL S CIENCES IN THE GRADUATE S CH O OOL, EASTERN I L L INOIS UNIVERSITY C H ARLESTON, I L L INOIS 2 014 I HEREBY RECOMMEND THAT THIS THESIS B E ACCEPTED AS FULFILLING THIS PART OF THE GRADUATE DEGREE C ITED ABOVE /�)/, �' '''Y "''l'! ,i :..�,, .;_�,� -1.,,:('.,l,f' 'cf - DEPARTMEJ\::frl'6CHOOL Cl-IA!R ./DAT)t ,. / Abstract Dams are a mai n source of anthropogeni c d isturbances on r iver systems and can affect rivers i n a variety of ways. Dams have the abi lity to change rivers from lotic to l entic habi tats, affect sediment transportation, connectivity, water qua l i ty, l inkages with wetlands and the qua lity of i n-stream and riparian habitats. The Danvi l l e Dam was constructed i n 1914 on the Vermil i o n River i n Danville, I l linois and i s becoming a safety hazard for human recreation o n the Vermilion River, resulting i n three deaths i n the last 10 years . The I l linois Department Natural Resources i n conj unction with the c ity of Danvil le has proposed to remove the Danvil l e dam o n the main channel fall 2015 and a n addi t ional l o w head dam, E l l sworth Dam, i n its tributary the North Fork V erm i li o n i n fal l 2 014. To assess the impacts of removing the E l l sworth and Danv i l l e dams on the aquatic b iota and stream habitat qua lity. Beginning October 2012, we assessed the fish and macroinvertebrate assemblages i n twel ve, 100 meter l ong sections of river. Six of the 1 2 s ites were l o cated i n the North Fork, referred to as E l lsworth Dam, and six sites i n the Vermilion, referred to as Danvi l l e Dam sites. Each dam consi sted two s ites below the dam and four s ites above the dam. The above dam sites consi sted of a s ite d irectly above the dam, the last 100 meters of the pool , the first 1 meters the river and an upstream site (the farthest accessible upstream l o cation). This sampl ing captures the community composition both above and below the dam (immediate i mpacts) and characteristics of s ites above the dam's i nfluence. The effects the dams were greatest seen at base flow, in the fa l l seasons. Data shows community composition demonstrates strong i nfluences of b oth dams on fish assemblages and revealed compositiona l differences between the two drainages. In sharp contrast, a c luster ana l ysis no separation in community composition between rivers or sites in the spring. Therefore base flow was used to assess the fish and macroinvertebrate community structure. Non-metri c Multidimensional Sca ling was used to assess the structure of fi sh and macroinvertebrate communities. Per-Manova analysis verified r iver, l o cation, and their interacti on to be significant on fish assemblages. Mantel tests showed there was an effect of habitat on fish community structure but no significant effect of physica l d istance on fish assemblages. Per-Manova reflected the compl ex ity of compositi onal relationships with both r iver and the interaction of r iver and location to be significant on macroinvertebrate assemblages. Unlike the fish, macroinve1iebrate assemblages were affected by distance but not l ocal environment. The Ve1m i li on R iver system i s one of the h i ghest qual ity systems in I l l inois. The removal of the dams will a llow the main channe l to reconnect and a l so provide access to upstream habitats in the North F or k tributary. E l im inating physica l barriers wil l a ll ow fish to move upstream a l l owing them to restore populations. Returning to a flowing system wil l increase macro inve1iebrate d iversity increasing aquatic resources . The combination of these factors wil l increase the qua lity of the V ermili on R iver and return it to its natural environment. The goal of thi s study i s to serve as a model to test the efficacy of dam removal in restoring the diversity and structure r iver communities. ii Dedication I woul d like to dedicate my thesis manuscript to my fiancee, Kate Gdowski, for her love and support through my Master's experiences at Eastern I l linois University. I woul d have never have been abl e to get through this process if it was not for her, nor ever applied to graduate school. a , Pam Hastings. to to c am e m was of it was m my career. a genume interest never say no to a my success so nature that m to morn will to on iii Acknowledgements I woul d l ike to thank my advisor, Rob C o lombo, a l l owing me the opportunity to work in h i s lab. This opportunity has a l l owed me to gai n the knowledge to become a better fi sheries b i ologist and a llowed me to present my data at multiple conferences . I woul d l i ke to thank my co-adv isor, S cott Meiners, for mentoring me throughout my proj ect throughout lucky to had his gui dance and support throughout my time at EIU . t o thank the rest of m y fami ly, m y dad M i ke Hastings, B rother C hris I woul d Hastings Master's degree. I was S cott's first student working on fish and am very S ister Jam i e Hastings for a l l thei r support through my Master's Degree. I woul d also l ike to thank my future in laws, Rich and N ina Gdowski for a l l thei r l ove and support throughout I time being away. l i ke to thank my lab mates for a l l their help and support throughout my proj ect Especiall y, C l int Morgeson for all the l ong days in the field d ipping more fish I coul d have ever ask and Sarah for helping me through my first year at Eastern I l l inois Universi ty and teaching how to track Catfish. iv Table of Contents Abstract Dedication m Acknowledgements L i st of Tables L ist of Figures vn I ntroduction Chapter 1: When to S ampl e: Seasonal Shi fts in Dam Effects on F i sh Assemblages 5 Chapter 2: Separating Environmental and B arrier Effects of Dams o n Fish and M acroinvertebrate Assemb l ages I ntroducti o n 12 Methods 16 Results 19 D i scussion 22 Conc lusions 38 Literature C ited 42 v of Tables Table 2.1. Laboratory water chemistry analysis of sites during the Fall 2012. 26 Table 2.2. Total catch of fam ilies by l o cation within river. 27 vi List of Figures Figure . Vermil ion (D) and North Fork Verm i li on River (E) sampl ing sites. 10 dam sites ( 1 ,2), pool sites (3,4) and upper river s ites Figure 1.2. C luster analysis fa ll 20 12 (A) and spring 20 1 3 (B) 1 1 communities using species presence absence. Figure 2.1. Map the Verm i lion River (D) and North Fork Verm i lion River (E). S ites are numbered by l ocation; Below Dam ( 1,2), Pool ,4), and River Figure 2.2, D istribution of substrate types across the d ams in the Verm i lion 29 River (A) and North Fork Verm i lion (B). QHEI S cores to the presence of dams on the Figure 30 Verm i lion (sol id) and North Fork Vermili on (dashed). Figure Response of S impson's Diversity Index of fish to the presence of 31 dams on the Vermi l i on River (so li d ) and North Fork Verm i li on (dashed). Figure 2.5. Response of index of biotic integrity scores to the presence of 32 dams on the Verm i li on River (solid) and North Fork Verm i lion (dashed). 2.6. Simpson' s D i versity I ndex of macroinvertebrates from the 33 Verm i lion River (so lid) and N orth Fork V ermil ion (dashed). Figure 2.7. Macroinvertebrate B i otic I ndex Scores V erm i lion (sol id) and North F ork Verm i lion (dashed). Figure Non-Metric Multidimensional Scaling of fish assembl ages using 35 presence-absence data from both years pooled. Figure 2.9. M u lt idimensional Scaling of sites based on rel ative 36 vii abundance of Macroi nve1iebrates. Figure 2.10. Average vel ocity (m/s) of water at s ites. Verm i l i on (so lid), North Fork (dashed). 37 Introduction Dams are a main source of anthropogenic d isturbances on river systems. Over 7 5,000 dams exi st i n the United States and 40,000 are greater than 5 0111 tall (Bednarek 200 1 , Gregory et al. 2002,). Historicall y, dams were constructed to provide a wide array of services; power generation, flood control , navigation, water supply and recreation (Bednarek 2007). However, many dams 1 , Leirmann, the United States have outlived thei r eco no m ic usefulness and l ast are removed to reestablish natural conditions and to i ncrease recreation safety. Over years, roughl y 600 dams have been removed In the state of the United States ( C o llins et al., approximatel y 1 ,600 dams currentl y exi st, 455 of which are over 5 0 years old and many are no serving their initi a l functio n (ASDSO, 2012; ASCE, 1 2). Ecologically, dams have the abi li ty to change rivers i n many of ways (Co l l i ns et 2007). The flow d ue to the impoundment causes hab itat above the dam to become a moving reservoir with a concomitant change i n b iota. The process of upstream pooling also changes sediment transportation. F i ne sediments settl e in the reservoi r area fil li ng in exi sting cobble, boulder and other l arge particles (Bednarek 200 1 ) Overtime, sedi ment b uilds up above . the dam; this sediment i s flow also reduces transported downstream during l arge floods. reduction natural transp01iation of l arger boul ders, cobble, and debris to downstream habitats. The accumulation of sediments and debris upstream may degrade downstream habitats because d ownstream ecosystems rely on thi s sediment and debris transportation for different life stages of biota (Leirmann et. a l 20 1 2). The retention of sediments also causes a water effect", which l imits sediment and nutrients to downstream habitats changing water chemistry ( Bednarek 2001 ). The temperatures increase surface area the upstream reservoir usuall y become stratified due to an decrease in flow (Bednarek 200 1 ). The discharge of hypol imnetic 1 water, water below the thermocline, downstream can decrease average water temperature i n downstream habi tats and i s often oxygen and low productivity water significantly alters 1 ). The B ednarek in dissolved oxygen and nutrients (Gregory et. al 2002, downstream habitats to decrease quality. Because there are few monitori ng programs, ecological effects of dams on biota are relativel y unknown. of 2005 , 5 00 dams were removed the United States and than of those dams underwent ecological studies (Thomson et. al 2005). B ecause dams are physical fish and macroi nvertebrate species, assessing the i mpacts of dams i s i mportant. The physical transformation of to reservoir habitat changes species composition allowing l entic tolerant fish species to establish and displace native l ot ic species to an upstream l ocation ( Burroughs et. al The change from lotic to l entic also causes changes in water quality l eadi ng to a shift in macroinvertebrate species from tolerant lotic species such as Ephemeroptera, and Trichoptera (EPT taxa), to intol erant species like Chironomidae. Sediment transportation may be one of the key d isturbances affecting accumulation The sediment above the dam reduces habitats for spawning of native species. Native species get disp l aced to upstream habitats where competition may increase. S i m i l arly, the sediment/debris transportation downstream greatly affects biotic assemblages. The buil dup of sediment reduces nutrients and sediment transfer downstream that may be needed for nesting and refuge for species (Leirmann et. al 20 1 2 ). D ams retain i mportant nutri ents incl uding s i l i ca, changing phytoplankton community structures downstream (Gregory et. al 2002). The trapping of nutrients can l ead to a cascade in food webs by changing the phytoplankton base whi ch can alter the macroi nvertebrate community, potential l y causing in a change to the fish community composition. 2 Altercations of water temperature, and/or releasing epi limnetic or hypolimnetic water can change species composition between cold water and warm water species (Bednarek 1 ). B iotic communities can also be affected b y s tream flow regul ation. Many dams regulate stream flow based on power usage. When more power i s needed, more water i s released. The surge flow downstream can d isperse many organ isms downstream (Vehanen et. al 2005). The from water entering i nto the turbine can increase morta lity of fi sh upstream not abl e to escape the high vel ocities (Vehanen et. al 2005) . Ab i ot ic and b i otic effects o f dams can greatl y influence the success o f individual species reducing or changing hab itats, food webs, reproductive success and m igration. The impacts of darn on· species can, therefore, affect community structure. With i n river d ispersal and recolonizati o n are important for communities to remain stable. D ispersal all ows species to move to new hab itats, find new sources and immigrate into other populations and communities. These inter-community i nterac t ions help define metacommunities. According to Leibold et aL a metacommun i ty i s a set of communities l i nked d ispersal multiple i nteracting species. can affect metacommuni ty composition by acting as a barrier to immigration emigration speci es across the dam. Dams with improper fish passages cause fish species below the damn to d i sconnected from popu l ations above the dam and e li m i nate passage to quality habitats. Dams can prevent species upstream from immigrating downstream because of physical changes. Riverine species with drift are i mpacted dams where reduction flow prevents l arval m igration to downstream sites (Ni s l ow et. al 20 1 1 ) . These b arriers may l ead to decreases l ocal abundance and potential l y decrease popul ation s ize and b iodiversity et. al 20 1 1 ). 3 I n this study we assessed the fish and macroinvertebrate assemblages rivers i n Danvi l le I l linois, Vermilion River and two impounded North Fork Vermilion. O ur goals were to: (1) assess seasonal effects of dams on fish assembl ages; assess species r ichness, diversity, and indexes of fish and macro invertebrates; ( 3 ) determine hab itat quality in relation to impoundments; ( 4) use a metacommunity approach to assess community structuring fish and macroinvertebrates in relation to impoundments. Overall , this study is to serve as a test efficacy of dam to i n restori n g the diversity and structure of r i ver communities. 4 to Sample: Seasonal Shifts Dam Effects on Fish Assemblages Anthropogenic forces are the main disturbances for waterways and typi c a ll y channel modification, i ndustr i al outflow and agriculture . Ecol o gi cally, i nvolve dams cause habitat changes from lotic to l enti c , affect sediment transportation, water quality, connectivity and the quality of in-stream hab itats ( Co l l ins et al. 2007). The generation of new habitat types within impounded reaches i ncreases the performance of species that otherwise rare i n l otic systems, leading to d i st inct fish assemb lages i n the pool s that form behind dams (Santucci et 2005; Butler & Wahl 1 0) . Dams can affect metacommunity composition b y alter i ng immigration emi gration of f i sh species across the dam. With i n r iver systems, dispersal i s cri ti cal for community as it a llows species to migr ate to new hab itats, locate shifting food sources and i ntegrate other populations. Dams with i mproper fish passages cause fish species below the dam to be excl uded from upstream reaches and e liminate passage to quality habi tats (Burroughs et al. 2010). Besides acting as physical b arri er s, dams can change can cause shifts upstream community assembl ages b oth downstream. The combi ned abiotic and individ ual species et effects of dams can greatly influence the success of changing hab itat, food web structure, reproductive success and m i gr ation 1 1). The aggregate alteration fish movement and hab itat structure can therefore dramaticall y affect fish community structure. F i sh community structure also changes seasonally b ased on 2000; Taylor 1 h istory differences, H igh flows can hab itat var i ab i lity and accessib i l ity (Taylor for d ifferent fish species to access habitats or may even alter preexi sting habitats all owing for util i zation for different fish species. (Taylor et al . 5 2006). Therefore. shifts i n seasonal discharge may mask the impacts impoundments on fi communities. The purported impacts to fish communities are one the maj or just ifications for the removal of impoundments (Helms et a l. 20 1 1 ). H owever, there is no standard sampling protocol that defines when surveys to assess dam impacts on fish should be conducted. Thi s paper aims to determine whether sampling season i nfluences the perceived impacts of dams on fish community assembl ages and determi ne appropriate samp l i ng season for assess i ng anthropogenic disturbances. The Vermilion River head dam, D anvil le Dam, �3 l ong dam Danvi l l e , I llino i s i s a tributary the Wabash River with a l ow- upstream from the confluence. It is a 3 . 3 5 acts as a barrier for most of the rn high 67.25 m Half a m i l e upstream dam is the confluence of the North Fork Verm il ion R iver ( F igure 1.] ) . Thi s tributary also has a 30 m l ong l ow-head dam, E l lsworth Dam, 0.08 upstream from the confluence. B oth of these dams act as barriers to fish movement at base flows. During spring floods the E l lsw01ih Dam i s typical l y submerged for connectivity with the North Fork of the Vermi lion. The Danville Dam can also become submerged, only during ten year floods (Trent Thomas, pers. observation.) . These spring floods may reduce the effects of the dams for a brief period. To assess impacts of the i mpoundments on fish assemb l ages, sampl ing was conducted sequentiall y during October 2012 and May 2 0 1 3 . F i sh were sampled in twel ve, ] of river; · i n the North Fork Vermilion (El lsworth Dam sites) and m sections i n the Verm i l i on (Danvil l e Dam sites) (Figure 1 . 1 ) . For each dam, sampl ing consisted of two s ites below the dam, 6 two s ites i n the pool (directl y above the dam and the l ast 1 00 meters of the pool ) and two river sites (the first 1 00 meters of river and the farthest accessible upstream E l lsworth Dam fal l sampl ing was conducted using DC barge shocking a 2 ,5 00 watt was electrofished for a total of 30 m inutes beginning downstream moving generator. Each upstream. Danv i l le Dam was sampl e d using D C boat shocking with a 4,000 watt generator with two W isconsi n droppers for a total of 30 minutes across the entire area. This methodology reflects l arger nature at the nearest this channel. Two seines were conducted at the Danv i l l e Dam s ites to ensure collection of smaller fish that DC boat shocking i s not capabl e of sampl ing. Spring sampl ing protocols changed due to i ncreased d i sch arge; both rivers were sampled in using DC boat shock i ng with a 4,000 watt generator. These samples were supplemented with two mini fyke nets at each s ite for 24 hours to col lect smaller fish. total of 54 fish species were col l ected in the and 56 species in sprmg. Of these, ten species were only found in the fal l and twelve species in the spring. The species found onl y m spring were l arger fishes, three native buffa l o species (Ictiobus spp. ), three species of gar (Lepisosteus spp. ) and the non-native s i l ver carp (Hypophthalmichthys molitrix). Species found , i n the fal l were mainly small er d arters and cyprinids that may have not been sampled i n spring due to the i ncrease i n flow. Catostomi d ae abundances varied dramat i ca l l y between seasons with i n pool sites. A bundances i n Vermilion pool s ites increased from . 0% to 1 3. 7% of the community (7 to 4 7 individuals) and from 0 . 0% to 5 . 0% ( 1 6 individuals) i n North Fork species were not captured anywhere with i n North Fork sites fal l but found all s ites in the spring. Overa l l, there were l arge seasonal changes i n composition, most of would not be related to capture effic iency. 7 examine spatial patterns of fish comnmnity composition, a h i erarchical cluster analysis was conducted for (McCune sampl i ng using a presence/absence matr i x i n P CORD 6 Grace 2002). Fall community composition showed strong influences of both dams on fish assembl ages and revealed compositional d ifferences between the two drainages ( F igure sharp contrast, the c luster analysi s showed n o separation i n community composition 1 .2a) . between r i vers or s ites in the spring (Figure l .2b). These analyses show how fish assembl ages change seasonall y . The separation of s ites i n the fall c luster definitively show effects o f the dams i n system and also show relationships among s ites. Below dam and upper r iver sections of the Vermi li o n were s i milar (Figure 2a), reveali ng a spatially limited dam i mpact and a large shift in composition caused were also compositionall y simil ar to the below dam sites on the Pool sections of the North the poo l . reflecting their connectiv ity. I n contrast, fish composition i n the spr i ng d i d not vary between the two drainages, suggesting that spatial structuring and dam i nfluences only base whereas composition i s measure communities mix at high flow. Seasonal variab i li ty at fish community caused by greater fish movement dur ing i ncreased d ischarge. As a second seasonal changes i n fish community structure, we used Mantel tests to relate p hysical d istance (stream l ength) between sites to compositional d i ss im i l ar ity ( Sorensen's d istance). These tests showed that s ites located further apart were overall less similar in fam i l y composition (P=0.003) and species composition (P=0.002). I n contrast, spring analyses showed no pattern for either fam i ly ( P=O. l or species (P=0.2 1 0) composition. S ites further i n d istance were less similar in fami ly and species composition i n structure (Thompson similar ity fal l suggesting d istance affected assemblage Townsend 2006; Ruiz-Gomez et al. 2008). The compositional downstream and river sect ions of the Verm i l li o n shown i n the cluster anal ysis was 8 not sufficient to d isrupt thi s overall pattern. There was no spatial pattern the spring, shmving greater mixing of fish assemblages during increased discharge. Together, these results indicate that the of sampli ng to determine the effects of dams may have profound influences on the The long term biological effects of dams are relatively unknown as there are sufficiently long studies. D espite the lack of informat ion, dam removal i s increasing across the United States (Thomson et al. 2005). The Verm ilion River system i s one of the highest qual ity river systems in Illinois and is used as the reference site for the I llinois eastern region i ndices of biotic integrity . Given the high qual ity of the river, there are few chal lenges to the system outside of the effects of the darns. Spring time floods in the Vermili o n show reduced effects of the dams are i n flows by i ncreasing connectivity. The presence of b uffalo species (!ctiobus in the river as well as multiple redhorse speci es i ncreased spp.) n the pools reflects in the lentic zones. Whether spring homogenizati o n i s driven by downstream fish migrating above the dam to spawn or upstream fish moving downstream is not clear. Nor is it clear whether thi s spring mixing is sufficient to ensure gene flow across dams. To adequately assess dam impacts on fish assemblages, sampling protocols must account for seasonal fluctuations i n both rivers the communities within them. To s ufficiently document dam i mpacts on fish assemblages, sampling must occur once base flow has been re-establi shed and the temporary mixing of communities has abated. These results also suggest that more work is needed to determine whether low-head dams are effectively i solating populations or whether h i gh events allow sufficient contact between upstream and downstream popul ations. 9 D6 Figure . Vermilion (D) and Fork Verm i li o n R iver (E) sam p li ng sites . (1 sites s ites (5,6). ,4) and upper darn sites 10 E2 ----_.; El --....... E3 ---. i--��� ����, -�����--E 4 ----' Es ������---_____, ----�E6 ------ B E 4 -----E3 �---�-----�----� E2 ���--����-Es ---.1--... ---' E6 --....... Figure 1.2. C luster analysis of fall 2012 (A) and spring 2 013 (B) communities using species presence absence. 11 Separating Environmental and Barrier Effects of on Fish and Macroinvert:ebrate Assemblages Introduction Dams are a major source of anthrnpogenic d isturbance on river systems. Historicall y dams were constructed t o provide a wide array o f services: power generation, flood control , nav igation, water supply and recreation (Bednarek 200 1 , Leirmann, 2 0 1 2). Attention to dam removal i s i ncreasi ng i n response to eco logical and socioeconomic pressures. dams the U ni ted States outlived their economic usefulness and are being removed both to reestab l i sh natural conditions and to i ncrease safety. Over the l ast years roughl y 600 dams have been removed in the United States (Co l li ns et al. , 2007). the state of I l l i nois approxi mately 1 ,600 dams currently exi st, 455 of which are over 50 years old and many are no longer serv i ng thei r i nitial function (ASDSO, 20 1 2; ASCE, Studies 1 2) . dam impacts commonly focused on how dispersal (Martinez et a l. 1 act as physical barri ers to Nislow et a l. 20 1 1 ). P hysical barriers i n river systems can cause for a variety of b iota at d ifferent l ife h istory stages. Many riverine fish taxa rely on natural flow regimes and channel connectivity to maintain reproductive success, genetic and access to food sources. The presence of these barriers can cause shifts i n community structure b y not all owing organisms t o move freely throughout system. Though egg and l arvae stages of macroinvertebrate taxa are mainly aquatic, multipl e taxa have flying adu l t stages ( Hershey et al. 200 1 , Merritt and Cummings, 1 996,). Therefore, dispersal can to be affected by dams as barriers i n aquatic l i fe h istory stages through dri ft. Though some i mpoundments addressed d ispersal concerns by adding fish l adders, s ide channels, or pumps, they may still result in d ispersal restriction (Nislow et al. 2 0 1 1 ). 12 I n add ition to acting as phys ical barriers i n river systems, dams also d isrupt ecological processes by changing habitat structure. The reduction i n flow due to i mpoundment causes river habi tat to become a reservoi r with a concomitant change i n The process o f upstream pool ing changes sediment transportati on, filling i n existing cobble, boulder and other large particles with fine sediments (Bednarek 2001 ). Over t ime, sediment buil ds up and may only transported downstream during large flood events. Transportation of l arger boulders, cobble, and debris to downstream habi tats is reduced leading to lower quality downstream habitats. B i ota i n the downstream ecosystem often reli es on sediment and debris transportation at various life stages (Leirmann et . al 2012). larger i mpoundments, there can also be alterati ons to d issolved oxygen levels, nutrient load i ng and suspended sol i d levels (Burroughs et. al Hammer l 0, Overall, these hab itat changes may cause shifts from natural community structure withi n i mpacted areas. The phys i cal transformati on of river to reservoi r changes species composition allowing lentic fish species to establish and displace native lotic species (Burroughs et. al 201 The accumulati on of sedi ment above the dam reduces habi tats for spawn i ng of stream fish species. This accumul ation also alters macroi nvertebrate communities by filling i n the i nterstitial spaces substrate. S im ilarly, upstream deposition of sediment reduces nutri e nts and sediment transfer downstream that may be needed for nesting and refuge certain taxa (Leirmann et al 12). This change from lotic to lentic causes changes water qual i ty shifting macroi nvertebrates abundan ces by decreas i ng Ephemeroptera, Plecoptera, and Tricoptera; whi le increas i ng i ntolerant speci es 2004). as C hironomidae (Hammer and L inke 2003 , T iemann et Dams retain i mportant nutri e nts such as s i l i ca, changi n g phytoplankton communities' downstream can cascade through i nvertebrate and food (Gregory et. al 2 002). 13 alterations of water temperature, and/or releasing epilimnetic or hypolimnetic water may also change species composition (Bednarek 200] ) . Episodic release events have the potenti a l to cause s urges that disperse many organisms downstream et. al 2005). Abiotic and biotic effects of dams can greatly influence the success of individual species changing habitats, food webs, reproductive success and migration; resulting in a potential ly affecting community structure. With i n river systems, dispersal and recolonization are important for community stability (Taylor et al. 2006, S l awski et al. 2008, Heino, 20 1 2). Dispersal all ows species to move to new habitats, find new food sources and integrate with other popul ations . The linkages among habitats reflect the metacommunity structure of riverine systems ( Leibold et al. 2004 ). Therefore, metacommunity theory can be used as a conceptual framework to understand how communities function i n fragmented l andscapes such as rivers with impoundments. Leibold (2009) out li ned four p aradigms to model metacommunity dynamics i ncluding mass effects, patch dynamics, neutral dynamics, and species sorting. Of these, patch dynamics, species sorti ng and, neutral dynamics appear important for impounded river systems. According to the patch dynamics paradigm, variation in community composition i s generated by patterns of extinction and colonization of i ndividual patches. Dams can affect metacommunity structure by acting as a barrier to immigration and emigration of species, disconnect popul ations and e liminate seasonal passage to different habitats. Darns may also prevent species migration because of physical changes i n the environment acting as a behavioral deterrent rather than as physical barriers (Taylor et a l. 2008). Variation in community composition may also be generated by species assorting along environmental gradients when d isper sal is not s uffici e nt to change d istribution (Leibol d et associated with alteration of 2 004). Environmental changes and the formation of pool s behind dams can i ncrease l entic 14 species' reproductive success. d isplac i ng l otic species upstream. S im il arly, reduction in flow and changes i n sediment structure may cause l ot ic fish species to disperse upstream to h i gher quality habitats. The d isplacement of fish upstream has the potenti al to i ncrease competition which can lead to changes i n commun i ty structure (Jackson et al. 200 l ) F i nally, . assemblage composition may be random, reflecting a l ack of d ispersal l im i tation or environmental filtering. Such neutral structuri n g (Leibold 2009) represents a null hypothesi s for the system. U nderstandin g how dams control metacommunity structure may suggests ways to ameli orate their i mpacts and predict the i mpacts metacommunity approach was used to understand dam i mpacts on assemblage structure of two i mpounded rivers i n Danville I l linois, the Vermil ion R iver North Fork Vermilion. Thi s was done separately for two groups of organ isms, fish and m acro invertebrates, respond to dams d i fferently to provi de an ecol o g ical contrast i n susceptibility to i mpoundment Dams represent physical barriers to fish movement, but should not macroinvertebrates with flying adult stages. d ispersal contrast, dams shoul d i n fluence macroinvertebrate communities primar i l y by altering habitat structure. Therefore, metacommuni ty responses to i mpoundment are expected to differ dramatically. Assemblage composition data across these two i mpoundments were used to address following goal s: ( 1 ) to assess spec i es richness, d iversity, and biotic i ntegrity of fish and macroinvertebrate assemblages i n response to dams, (2) to assess fish and macroinvertebrate community structure responses to dams, and (3) to determine rnetacommunity drivers of fish and macro i nvertebrate community structure. The overall goal of thi s study i s to serve as a model to test the efficacy of dam removal restorin g the diversi ty and structure of river communities. 15 Methods Study The Danville Dam was constructed i n 1 9 1 4 on the Vermil i on R iver i n Danv il le, Ill i nois. Thi s dam was h istorically u sed for hydropower, but thi s functi o n i s now obsol ete (Thomas 20 1 2). The Danv il le Dam is becomi ng a safety hazard for human recreat i on on the V erm i li on R i ver resulting i n fatalities since 1 99 5 ( IDNR). The I l l inoi s Department Resources i n conjunction with the main channel i n fall city of Danville has proposed to remove Natural Danv i l l e Dam on 1 5 . An additional proposal to remove/reconstruct E l lsworth dam Fork Verm i li o n was created as wel l for the fa l l of 20 1 4. The Vermi li o n on the basi n i s 1 ,485 square miles with three tributar ies, the Salt Fork, M i d dl e Fork and North Fork (IDNR, The North F ork tributary is a of 4 8 . 2 miles and dra i nage of 292 square m i l es (IDNR, There i s an i mpoundment approximately 0 . 5 3 m iles upstream, Ellsworth Dam, from the confluence. The Vermi li on River drains i nto the Wabash River near Cayuga, Indi ana with an impoundment (Danville Dam) 22 miles upstream of the confluence ( I DNR, Thomas, 20 1 Description To assess the impacts of removing the E l lsworth and Danv i l le dams on the aquatic and stream hab itat quality a three phase project was initiated. Beginning October 20 1 2, assessment of the fish and macroinvertebrate assemblages i n twelve, 1 00 meter l ong secti ons r iver began" of 12 surveyed were l ocated i n the North Fork Vennilion six s ites the Vermilion R iver ( F igure 20 l ) . Each dam consisted of two s ites below the and four s ites above the dam. The above dam s ites consisted of l ocations d irectly above the dam, the l ast 1 00 meters the pool, the first 1 meters of the and an upstream site (the farthest accessible 16 upstream l ocation). Th i s captures the community composition above and bel ow the dam (immediate i mpacts) and characteristics of sites above the dam's influence. Fish Sampling multiple gear approach for fish sampl ing was used to maintain capture effici ency across the system. E l lsworth Dam sites used DC barge shocking with a 2,5 00 watt generator and a five person crew (three probe/netters and two extra netters). Each site was electrofished for a total of 30 m i nu tes mov i ng upstream. Reflecti ng the l arger n ature of the Verm i l ion River, Danv i l l e Dam s ites were sampl e d using DC boat shocking with a 4 ,000 watt generator with two · droppers a total of minutes across the entire area. Two seine pul l s were conducted for a l l Danvil l e Dam s ites at the nearest sandbar to ensure col l ecti o n of smaller the D C boat shocking may have missed. Cyprinids and fish l ess than l 00 m m were euthanized and preserved in l 0% formali n solution for i dentification i n the l aboratory. Habitat Water conditions were col l ected u s i ng an Y S I Professional P lus I ncorporated, Yellow Springs, OH) at a l l s ites during all sampling periods measuri n g temperature ( C0), d issolved pH and conducti vity. Water samples were also collected at each pool , below d am ) seasonally and brought back to the l aboratory to measure suspended sol ids, dissolved solids, n itrogen, phosphorus and ammonia. P re l i m i nary showed l ittl e variation among sites, so these measures were dropped from a l l subsequent analyses. Velocity was recorded at each s ite, taki ng the average of six measurements, thalweg of start, middle, and end of each 17 Habitat quality and macroinvertebrate communities were assessed at a l l wadeabl e sites =8) using the O h io Quali tative Habitat Evaluation Index (QHEI). A set of j abs with a D frame net was conducted based on QHEI outcome to sampl e habitats proportionally. H abitat assessment the upper Danv il le Dam sites was done using a mod i fied QHEL Macroi nvertebrate samp l i ng for these sites i nc l uded a random set of 2 0 samples collected as the s ites are non-wadeable. To ensure consistency, seven random j abs (D-frame net) were conducted on each bank side and six ponar grabs i n the main channel . A l l macroi nvertebrate samples were preserved i n 95% ethanol for i dentification i n the l aboratory. A subset of 3 00 macroi nvertebrates was sampled using sampl e a spl itter and i dentified to genus (or to family i n the chironomidae). Statistical To assess metr ics fish and macroinvertebrate assembl ages between s ites and rivers nested one way ANOV As were conducted i n SAS v9.3. Non-metric multidimensional scaling (NMDS) was used to determine compositional var i ation among s ites for fish assemblages (presence/absence) and macroi nvertebrate assemblages (relat ive abundance). Presence/absence data were used fish assembl ages due to differences in gear types between rivers as a more conservative measure with seasons composition. Macroinvertebrate assembl ages were assessed abundance data as all s ites were sampl ed equivalently. Permutational were conducted to stat i st icall y assess compositional differences among s ites and r ivers. Mantel and partial Mantel tests were used to determine mechani sms dam i mpacts relating compositional d istance in macroi nvertebrate or fish assemblages (Sorensen's dissim i l ar ity) to physical d istance channel l ength) and environmental d i ss i m il ar ity (based on substrate 18 abundance, flow, water quali ty). Mantel tests, ord inat ions and permutational MANOVA were all conducted in PC-ORD 6 (McCune and Grace, 2002). Results System Quality Habitat The substrate of the Ver m i li on R iver below the Danvil l e Dam (D l , D2) consisted main l y of gravel and (Figure whereas upstream of the dam the substrate was h i gh l y dominated by sand The North Fork Ver m i lion had a consi stently gravel proporti on both below and above the dam. Upstream of the E l lsworth pool there was an i ncrease i n cobbl e whereas there was only appreciable sand at the l owest below dam site (Fi gure 2 .2b ). QHEI scores ranged from to 81 for both rivers. The l owest rated site was D3 with a poor rating of 42, and i s the c losest upstream site to the Danv i l l e Dam (Figure 2.3). The h i ghest rated s i te 81 "exce l l ent" was the most upstream s ite i n the North Fork Vermil ion, the furthest s ite from the Danv i l l e dam ( F igure Fish A total of 10,345 fish from 62 species were collected i n the Ver m i lion North Fork Verm i l ion species) and 1 speci es) R ivers in the fall of 2 0 1 2 and 2013. Of the 62 species collected, there were two state endangered and two state threatened speci e s; threatened: Eastern Sand Darter (Ammocrypta pellucidum), R iver Redhorse (Moxostoma carinatum); endangered B l uebreast Darter (Etheostoma camurum), B i geye Chub fam i lies col lected, d istribution amblops) . Of the 1 3 C atostomi d ae (F 1,5= 1 2 .23, P =0.002,), Centrarchidae 19 1,5=8 .2 8, P=0.0 1 0 ,) C l upeidae (F 1,5= 1 6. 1 3 P =0.008,), and Cyprinidae (F 1.s=23 . 83 , simil ar varied significantl y between rivers (Tab l e 2 . 2 ) . Simpson's Diversity patterns within each river; highest scores immediatel y below each dam, fol lowed by a decrease in the pool reach, and an Vennilion River exhibited higher I BI scores than the North Fork (Figure pool sites exhibited the The score of 5 2 . 5 was nvers I B I scores in the system (F1 u2= 1 3 .06, P<.000 1 ) (Figure 2 5 ) . . integrity scores ranged from 1 6. 5 (restricted) to 5 2 . 5 of Overall beyond the pool (F 1 1, 12=8 . 1 6, P=0.0005,) (Fi gure below Danv ille Dam and the l owest score of 1 The h i ghest at the upper end of the North Fork pool (Figure 2. 5 ). total of 7002 rnacroinvertebrates from l 09 taxa were identi fied in col l ections from fa l l 20 1 2 and fall 20 1 3 . The Vermilion River had the highest invertebrate diversity below the dam (Figure Diversity i n sites above D anville Dam decreased and showed high variab i lity (Figure 2.6 ) . The North Fork had the l owest macroinvertebrate diversity downstream, just above the confluence with the Vermilion, and the highest below the dam. There was a s i mi l ar decrease in diversity upstream of the dam as seen in the Vermilion River. M B I patterns showed better d ifferenti ation among systems (Figure 2 . 7 ) . The best quality sites were in the Verm i l ion below consistent increased M B I scores upstream of the dam. Analysis of North Fork the dam M B I scores showed the most downstream site farthest from the dam was Unlike poorest rated site. Vennili on, the North Fork M B I i ncreased to a "good" rating quality i n the most upstream site 2 . 7 ) . The M B I scores were significantly different among locations between rivers (F2.5=8.82, P=0 .002 1 ). 20 Community Structure Fish NMDS revealed compositional separation between the rivers ( F igure 2.8). The Verm i lion R iver sites below dam and upper river sites had similar fish structure whereas Verm i li o n River pool s ites grouped on their own based on dominance G izzard Shad (Dorosoma cepedianum) . The separation of the North Fork s ites i n the NMDS was heavil,y dependent on Ethostoma Percina spp., and Noturus spp. ( F igure 2 . 8 ) . Per-Manova analysis verified river, l ocation, their i nteraction to b e significant factors affectin g fish assemblages (River: Fl.!8 = 1 5 . 1 99, P=0.0002. Location : F2_18=2 .3694, P=0.006. RxL: Mantel tests showed there was an effect of hab itat on fish community structure (t=0. 3 7 5 , P=0.039) but n o sign i ficant effect Thi s association physical d istance (t=0.2 1 8, P=0. 1 04) on fish assembl ages. habitat dissimil arity was positive, indicating the more s i m il ar the physical habitat, the more s i m i lar the fish communities were. Consistent with these results, the parti al M antel test controlling for d istance stil l showed a strong environment effect (t=0.29 1 , P=0.039) and the pmii al test of d istance contro l ling for environment was non-si gnificant (t=-0.001, P=0. 500) . P atterns of macroinvertebrate community structure differed from fish assemb l ages in these sites. resulted i n dist inct groups of i nvertebrate composition (Fi gure 2 . 9) . S ites below the dam o n the Vermil ion R iver are clustered together and had h i gh abundances o f P otamanthi dae (craw li ng mayflies). S ites located between i mpoundments, except E2, were 21 These sites had h i gh abundances of Odonata, c lustered together as wel l (Figure D iptera. The remaining North Fork sites show Chironomidae, and var i ation in complexity rnacroi nve1iebrate assemblages. Permutational MANOVA reflected compositional rel at ionships; both river and the i nteracti o n of r iver and l ocation were si gnificant (River: F 1 18=5 P0=0.002; Location F2,18=] . 6853, P=0 . 1 1 2; R iver x Location: F2_1s=3. 3 693 , P=0.005). Macroinvertebrate communities showed d i fferent structuring patterns than fish assembl ages. Unlike the fi sh, macroinvertebrate assembl ages were affected test: t=0.407, P=.004), but not d istance ( Mantel l ocal environment (t=0.209, P=0.089). Partial Mantel tests control ling for environmental conditions retained d istance as a s i gnificant effect (t=0.3 67, P artial Mantel tests when contro l ling for d istance removed any chances of P=0 . 0 1 environmental effects P=0.728). Distance effects were positi ve, reflecting that the greater the separation of s ites in physical d istance, the greater their compositional dissimilarity. Discussion The Danvi l le Dam and E l lsworth Dam are having negative i mpacts on habi tat quality as as affecting fish and macroi nvertebrate assemblages i n the system. B oth dams are creating extens ive pool reaches l eading to a d ecrease i n flow and hab itat quality. As other studies, h i gher qual ity s ites were l ocated outside the pool reaches (Hammer and L inke, 2003 , T iemann et al. 2004, B utler and Whal, 20 1 0). The North Fork had a d ifferent pattern in substrate due to the confluence of the This resulted in site El bei ng heav i l y s ilted, and showing pool type characteristics. Thi s suggests the pooling effect from the Danvil le Dam i s being extended i nto the North Fork. The combinati o n of substrate types and QHEl scores i l lustrate the physical i mpact of these d ams in generating an environmental gradi ent i n habitat structure may i nfluence assemblage composition. 22 The Verm i lion lRiver had the h ighest I B I many impounded river systems due to L i nke, 2003 , N is low et sites below the dam. This i s common i n l ack of effici ent fish m i gration devices (Hammer and 2011). For exampl e, several fish species of Catostomidae and the Cypri n idae were found i n high abundances b elow the dams. I n both rivers, almost 5 0% total catch occurred i n the below s ites. Removal of the dams should all ow for greater abundances of these taxa to be found upstream ( Burroughs et al. 2 010). The comb ination of the I BI scores and abundances fish enforce that these dams are acting as b arriers to fish movement in the system. The existing fish l adder on the Danv i l l e Darn i s h i gh l y degraded with poor flow E l lsworth Dam has no fish m igration structure and often has no flow. most of the year and Therefore, both dams eliminate upstream and downstream connectivity except at high flow. Diversi ty and b iotic i ndexes of fish followed the expectat i on that fish should affected Analytical results of composition revealed the exact opposite. the dams as physical Compositi onall y there was strong separation between rivers and strong c l uster i ng of below dam (D l , D2) and upper r iver sites D6) of the Vermil ion R iver. Verm i li o n below upper river s ites were s im il ar i n QHEI and had the h ighest flows s ites and the Verm i l ion. The c lustering of these s ites i n the NMDS reflected that fish assembl ages were s i m il ar i n the Verm i li o n based on environmental simil ar ity. The lack of flow and l ower hab itat quality i n the Vermilion River pool sites caused 2005). S ites i n species fish to uti lize upstream or downstream habi tats (Santucci et al . N orth Fork had h igher variab i li ty i n flow QHEI which resul t i n greater compositi onal d issimilarity. There were s ignificantly fewer fish caught i n the pool sites of the Fork compared to the s ites i mmediatel y below the dam and river s ites. 23 OveralL the North Fork i s r iver with distinct poo l , riffle, and run habitats whi ch may directly lead to heterogeneity i n fish assemb lages (Pyron and Tayl or, 1993). diversity and b i otic indexes of macroinvertebrate assemblages fo llowed the expectation that macroinvertebrates shoul d primar i l y be affected by changes habitat. Analyses composition, as with the fish, revealed the exact oppos ite. However, macroinvertebrate assembl ages were affected by the dams differently than the fish. For macr o invertebrates, physical d istance was the main determinant of assemblage structuri ng, even when environmental effects were control l ed based on the number The NMS ordinati on, clearl y i l lustrates that s ites were clustered impoundments downstream. The most downstream sites were composit ional l y d istinct from all s ites above the Danv il le Dam. Likewise, s ites above the E l lsworth Dam were compositionall y dist inct from all other sites above the Danv i l l e Dam, regardl ess of strong var i at ion in hab itat quali ty. This suggests that the dams are acting as physi cal b arri ers to rnacroinvertebrate assembl ages at the larval stage. As eggs and l arvae l argely move with current, d ispersal of macro invertebrates should be primari ly from upstream to downstream ( Hersey and Lamberti, 2 001 ). Reduced flows from each dam may effectively filter out d i spersing macroinve1iebrates, reducing d iversity and altering composition. Environmental fi lter i ng may t hen reduce the abi li ty of upstream l ess tolerant taxa to persist behind impoundments. Alternatively, adj acent terrestri al habi tats may be control l ing habitat select ion by flying adults, l eading to spati a l heterogeneity, though thi s seems unl i kely. Implications Overall t hese dams are cau s i ng significant changes i n the b i ota of the Verm i l i on River and R iver creating l entic h ab itats and reducing habitat qua l ity. The reduction of 24 flow i n these pool s i s causing high sedimentation as wel l as reducing the downstream transportation different substrate types (Connol ly and Brenkman, 2008). These changes hab itat types are seen though changes i n fish assembl ages. There was a decrease i n fish, the pool reaches. They are abundance, diversity as wel l as a degradati on of b iotic i ntegrity also as physical barriers for many fish species especially, Catostomidae which are the Danv i l l e Dam. These dams are affecting macroinvertebrate assemblages concentrated as wel l by not having enough larval d ispersal, trapping l arvae i n the different i mpounded sections. removal of d ams upstream habi tats a ll ow the main channel to reconnect and also provide access to the North Fork tributary. E l i mi nating physical barriers may move upstream a l l owing them to restore populations (Brenkman et threatened species such as the B i g Eye Chub (Hybopsis (Etheostoma Eastern Sand D arter may fish to 200 8 ) . Endangered and B l uebreasted Darter pellucida), and the River Red Horse abl e to increase their range and all ow them to with upstream populations and increase the population size, similar to responses i n sport fish i n other dam removals (Kanehl et areas 1 997). of the dams mcrease i n the i mpounded the river, removing sediment and nutrient l oads. Returning to a free system wil l decrease lentic b i ota and i ncrease l otic b iota (Bushnaw-Newton et al. 2002, Burroughs et a l . 20 l 0 ) . The combi nation of these factors may i ncrease t he quality the Verm i li on and return it to a more natural environment. 25 Table . Laboratory analysis of water chemistry of sites in Fall 2 012. Total N i trogen (TON), Amonia (NH4), Total P hosphorous (TP), Souluble Reactive Phosphorous (SRP), Total Suspended S o li d s (TSS i n ppm), Total D issolved S o li ds (TDS i n ppm), and Total S o li d s (TS i n ppm) . S ite Season Hard n ess TON N H4 TP SRP TSS TDS TS El Fall 229.95 0.439 0.029 0 . 2 64 0 . 02 3 15 1 13 1 28 E2 Fall 229.95 0.439 0.029 0 .264 0 . 02 3 15 1 13 1 28 E3 Fal l 222.65 0.5 l 8 0 . 02 l 0. 1 78 2 .42E-05 3 1 94 1 25 E4 Fall 222.65 0.5 1 8 0 . 02 1 0 . 1 78 2 .42E-05 31 94 1 25 ES Fall 222.65 0.483 0.067 0. 1 28 0 40 77 1 17 E6 Fal l 222.65 0.483 0.067 0. 1 28 0 40 77 1 17 DJ Fal l 2 04.4 3 .9 8 8 0 . 04 1 0.247 0. 1 1 2 90 1 78 268 02 Fal l 204.4 3 .9 8 8 0.04 1 0.247 0. 1 1 2 90 1 78 268 03 Fall 200.75 4 . 774 0 . 09 0 0.320 0 . 1 84 90 207 297 04 Fal l 200.75 4 . 774 0 . 090 0.320 0 . 1 84 90 207 297 05 Fal l 204 . 4 3 .464 0 .03 5 0. 1 8 l 0. 1 1 2 90 1 83 2 73 06 Fal l 204.4 3 .464 0 . 03 5 0. 1 8 ! 0. 1 1 2 90 1 83 273 26 Table 2.2. Total catch of Family by Location within River. North Fork Vermilion Famil y Below Dam Pool River Below Dam Pool Atherinopsidae 85 36 7 0 0 0 69 1 80 7 l 8 411 322 829 404 857 1 52 31 0 0 490 1 647 910 23 351 Catostomidae C entrarchi dae 3 1 17 C l upeidae Cyprinidae 1 Esocidae 0 3 0 0 0 0 Fundul i dae 5 16 4 37 25 60 I ctalur idae 35 4 8 3 4 Lepisosidae 1 0 0 0 0 0 0 0 0 0 0 0 10 2 53 0 0 18 0 4 55 4 1 67 22 73 0 l 0 0 0 1 1 38 2400 1 945 462 1 47 1 Moronidae Poecil iidae Sciaenidae Grand Total 2929 1 1 1 14 27 ) � "- �'-' .,,, IJ.__,_-----'-����- -����- -��� Figure 2 . i . numbered the Verm il ion R iver l ocation; Dam (1 and North Fork Verm i li o n R iver (E). S i tes are P oo l and River (5,6). 28 1 0.8 • · · · · · · · ·� ·. · · -ti· · G ravel ·. ...... ° Cobble ... 0.2 0 1 2 4 3 5 6 Sites 1 0.8 '*' � 0.6 u !: !1l "O 5 .0 <( ...,,.._ S a n d : 0.4 • • 411• • G ravel """"* • Co b b l e 0.2 0 1 2 4 3 5 6 Sites Figure 2 .2 . Distribution of substrate types across the dams in the Vermilion River and North Fork Vermilion (B). 29 Ei1cellent 85 80 75 <II <lJ Good 70 0 65 u <.ll w 50 :c CJ Fair 55 50 45 Poor 40 1 3 Sites 4 5 Figure 2.3. Response of QHEI Scores to the presence of dams on 6 Vermi lion and Fork Verm i l ion (dashed). 30 12 10 x (!) "C .E > ..., 8 ·v; ... (!) > 0 6 _Ill !: 0 "' Q. 4 E Vi 2 0 1 2 4 3 5 6 Sites Figure 2.4. Response Verm i lion R iver S i mp son ' s D iversity Index of fish to and presence of darns on the Fork V erm i lion (dashed) . 31 60 55 45 40 35 00 e u_ iq_ u _n_ � 50 � ,/ / 30 _ __ ___ __ ,�'\ ''-,-<s:;/?:=� �lim ited 25 20 ., 15 _ _ _______ _ Restricted _ .. ,,. 10 5 0 1 2 3 4 5 6 Sites I<'igure 2.5. Response index of b iotic i ntegrity scores to the presence of dams on the R iver (solid) and North Fork Verm il ion (dashed). 32 8 7 @ 6 E .?; 5 -0 ·v; ... ill > Ci -"' i::: 0 VJ 0. 4 3 E Vi 2 1 0 1 2 4 3 5 6 Sites Figure 2.6. Simpson' s D iversity Index macroinvertebrates from the River (so l i d) and North Fork Verm i l ion 33 7.5 Poor • 7 " 6.5 iii 2: " ' " Fairly Poor " ' " - - - - �... - · - - - 6 - ----- • - - - - - - - - -Ill ,. , Fair ..... ...,., .... ' ... ... ... . 5.5 Good 5 4.5 4 1 2 4 3 Sites 5 6 F igure 2. 7. Macroinvertebrate B iotic I ndex Scores of Verm i l ion (solid) and North Fork Verm i lion (dashed) . 34 E1 A 04 "'" 03 A E3 A 06 .A C'l E2 4 05 A (j) ·x <( E4 A !l2 .A !l1 "' E6 4 E5 A Axis 'I Figure 2.8. Non-Metric Scali ng of fish assemblages using presence-absence data from both years pool ed. 35 01 A 02 A Hi A, N U'J · :x <a: 04 E2 .& A 06 E5 E1 A A A E4 A E3 A Axi s 1 Figure Non-Metric Multidimensional Scali n g of s ites based on relative abundance Macroi nvertebrates. 36 0.3 0.25 0.2 Vi - E � 0.15 ·u 0 Qi > 0.1 0.05 0 1 2 3 Sites 4 5 6 Figure 2 . 1 0 . Average velocity (m/s) of water at s ites. Verm i li o n (so lid), North Fork (dashed). 37 Conclusions Dam i s becomi ng an activity to allow r ivers and streams to return to thei r natural flow regimes, for natural sediment transportati o n and d ispersal of riverine organ i sms. Both the Danv i l l e Dam and E l lsworth Dam in the Vermi lion R iver system are causing changes in h ab itat macroinvertebrate composition. Seasonal variation i n water q uali ty, and i nfluencing fish head dams; therefore studies should be conducted at base flow can mask the effects of when the i mpacts of dams are most dist inct. resulting reaches of each base reduce the habi tat quality i n the pool altered fish community structures. Unl i ke fish communities, macroinvertebrate community assemblages were more affected by dams as not natural d ispersal macroinve1iebrate l arvae and eggs. Both dams are approved fal l of 1 S (Danvil l e Dam) . barri ers that compl ete removal i n the fal l 20 1 4 (Ellswo1ih Dam) and removal of these dams w il l have an immediate i mpact on the r iver systems by i ncreasi ng sediment transportation to downstream. Over t ime, these sediments should be dissipating allowing for natural sediment transportation to occur. Larger sediments (large gravel , cobbl e) w il l now be abl e to be transported into the pool sites i ncreasing habi tat quality. Overall , the of the dams should cause QHEI ratings to be no l ower than a good status due to h i gher abundances of l arger substrates to be transported to the s ites. Below dam s ites will also benefit frmn the removals over time by attaining larger substrates as wel l as gaining new habitat structure debris transported downstream. The removal of the dams w il l also have an impact on the water quali ty and flow. In fall 20 1 3 there was a large matted algal b loom i n upper nver as North Fork reaching from the dam to the first and a diatom bloom i n the Verm i lion reaching from the dam into the Fork up to the first river site. Such algal b looms can be dangerous to fish species i n the r iver 38 by causing over saturation of oxygen i n the day and hypoxi a at n i ght. These strong fluctuations i n oxygen l evel s can deadl y to many fish species. The removal of these dams wil l cause pool s ites to become free flowing and prevent such l arge algal masses. I mmediate i mpacts of removal may have a negative effect on fish assemblages i n below dam sites. Removal wil l cause a h i gh d ischarge of water whi c h may displace fish. Additionall y , fine sediments may fil l i n gravel and cobble habitats. These impacts should b e temporary and as the river develops natural flow regime and the sediments are be d i splaced evenl y downstream. The of the dams shoul d allow for fish species to be abl e to d isperse upstream. The Danvil l e Dam removal with be most important to species such as the Red Horse. Thi s genera of fish i s the most abundant i mmediatel y below Danv i l le Dam and i n the upper river sits of the Verm i lion. The removal of the dam should not only all ow these two populations to connect but also all ow for a greater potential habitat area when the pool reaches are removed. Furthermore, this removal should benefit the threatened species of the Verm i lion R iver, R iver Redhorse Eastern Sand Darter (Ammocrypta pellucida), and the endangered B ig eye C hub (Hybopsis amblops). A l l three of these species were found only i n the below d am s ites and upper river sites of the Verm i lion. The removal of the Danv i l le dam may a llow for higher reproductive success these species, i ncreasing the stab i li ty of thei r popul ations. L ike the Danv i l le Dam, removal of the E l lsworth Dam shoul d alter habitat and community assemblages. Given the North Fork V e1mil ion i s a small er tri butary to the Verm i li on, the dam may be more beneficial to smaller fish species. The North Fork had the h ighest abundances of darters and madtoms i n the system. Like the Verm i li on, these species were only collected immediately below the dam and in upper river sites. The removal of the dams should these small er species to occupy habi tats upstream and have more 39 success. The site i mmediately below the dam in the North Fork also had the only occurrence of endangered B luebreasted Darter (Etheostoma As seen with the QHEI, there are excel l ent rated habitats i n the upper r iver of the North Fork and access to these habi tats has the potential to the i ncrease the success of thi s species. Removal of the dams should also be beneficial to the macroinvertebrate community structure. After removal , a l arge sedi ment release from the pool s may sediments to for new l arger i ncreasi ng taxa quality. Over time, as l ower quality substrate gets d i splaced from the pool sections both and increasing M B I . The removals should the system which should cause macro invertebrate Thi s study h igher quality taxa w il l util i ze the new habi tat all ow for natural d ispersal of eggs s ites to have s i m ilar assembl ages l arvae i n similar indexes. continue to monitor the fish and macroinvertebrates i n thi s system until the dams are removed, i mmediately after removal, and post removal as the rivers return to their natural regimes. G i ven the high flows i n the spring whi ch may been displacing from upstream, we were not able to determi ne whether fi sh popul at ions were geneticall y di stinct. further assess the potential i mpacts of removal, in the spring (20 1 3 , 20 l multiple fish species were sampled for genetics. and fa l l (20 l each s ite multiple taxa were fincl iped for geneti c sampl ing. To ensure differences in l ife h i stories and d ispersal capab i lities a plethora taxa were chosen. Larger species, h ighest d i spersal, were the B l ac k Redhorse duquesnei), Golden Redhorse (Moxostoma S horthead Redhorse macrolepidotum ) , R iver Redhorse Redhorse These species have h i gh abundances i n the Verm i li o n R iver especial l y i mmedi ately below the dam and i n upper river s ites. also took geneti c samples from our most abundant species 40 which was the Longear S unfish (Lepomis megalotis), and smaller cyprin i ds such as the Spotfin Shi ner spilopterus) and Steel Color S h iner (Notropis spilopterus). Assessing the genetics of these species can more insight to fu l l the infl uences of dams on fish populations. 41 Literature American Society of C i v i l Engineers (ASCE). (20 1 2) . I l l i nois-Dams. Available: http://www.i nfrastructurereportcard.org/node/1 76. (December 2 0 1 2) . Association State Dam Safety Official s (ASDSO). (20 1 2) . I l li no i s D am Safety Program. Avail ab l e : http://www . damsafety.org/map/state.aspx?s= l 3 . 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