UTILIZATION OF SOYBEAN PRODUCTS AS FISH-MEAL PROTEIN REPLACEMENTS IN YELLOW PERCH Perca flavescens FEEDS BY SCOTT C. SINDELAR A thesis submitted in partial fulfillment of the requirements for the Master of Science Major in Wildlife and Fisheries Sciences Specialization in Fisheries Sciences South Dakota State University 2014 iii ACKNOWLEDGEMENTS I thank the following persons for making this study possible: Dr. Michael Brown for his unparalleled mentoring and assistance throughout the study, Dr. David Willis for admitting me into the program, Dr. William Gibbons for providing the soy ingredients, Dr. Steven Chipps for serving on my committee, South Dakota Game, Fish, and Parks for providing the fish, Michael Grey for helping with method development, Timothy Bruce for assisting in analysis, Dustin Shultz for assisting in sampling, and Michael Barnes for assisting with histology. I also thank Erinn Ipsen, Caleb Green, Hunter Brown, Cody Treft, Tabor Martin, Janae Oein, and Jacob Fernholtz for their assistance. A special thanks to my wife Alissa, son Timber, and daughter Melrose, for their support, encouragement, and understanding throughout my difficult graduate study. Also, thanks to my parents, Jim and Wanda for support and encouragement throughout my academic career. Support for this research was provided by the South Dakota Soybean Research and Promotion Council, United Soybean Board, South Dakota Game, Fish and Parks, South Dakota State University Department of Natural Resource Management, and South Dakota Agricultural Experiment Station. Fish handling and sampling procedures were conducted in compliance with the Animal Welfare Act (South Dakota State University Animal Care and Use Committee protocol approvals #11-62A and 12-101A). iv TABLE OF CONTENTS List of Abbreviations ........................................................................................................viii List of Figures .................................................................................................................... xi List of Tables .................................................................................................................... xii Abstract ..............................................................................................................................xv CHAPTER 1. ALTERNATIVE FEEDSTUFFS IN AQUACULTURE NUTRITION RESEARCH Introduction ..............................................................................................................1 Hypotheses and Research Objectives ......................................................................5 Soybean Products .....................................................................................................6 Antinutritional Factors ...........................................................................................10 Processing Methods ...............................................................................................15 Full-Fat Flours and Grits ..........................................................................16 Soy Oils ......................................................................................................16 Soybean White Flake..................................................................................18 Soybean Meal .............................................................................................18 Extruded Soy Protein .................................................................................19 Soy Protein Concentrate ............................................................................20 Soy Protein Isolate .....................................................................................22 Bioprocessed Soy Protein ..........................................................................22 Yellow Perch Culture .............................................................................................24 Recirculating Aquaculture System (RAS) .............................................................26 v Water quality ..........................................................................................................28 Feed Formulation and Nutritional Requirements ..................................................33 Proteins and Amino Acids..........................................................................35 Lipids and Fatty Acids ...............................................................................36 Carbohydrates............................................................................................37 Minerals .....................................................................................................38 Vitamins .....................................................................................................39 Other Supplements .....................................................................................40 Pelleting .................................................................................................................41 Feeding...................................................................................................................42 Summary ................................................................................................................44 CHAPTER 2. BIOPROCESSED SOY DIGESTIBILITY IN JUVENILE YELLOW PERCH Introduction ............................................................................................................55 Methods and Materials ...........................................................................................57 Experimental Diets and Fish .....................................................................57 Culture System ...........................................................................................58 Feeding ......................................................................................................59 Sample Collection ......................................................................................59 Compositional Analysis .............................................................................60 Results ....................................................................................................................60 Discussion ..............................................................................................................62 Summary ................................................................................................................65 vi CHAPTER 3. PERFORMANCE OF YELLOW PERCH FED BIOPROCESSED WHITE FLAKE Introduction ............................................................................................................71 Methods and Materials ...........................................................................................73 Experimental Design and Diet Formulation..............................................73 Compositional Analysis .............................................................................75 Culture System ...........................................................................................75 Feeding Trial .............................................................................................76 Physical Pellet Properties..........................................................................78 Statistical Analysis .....................................................................................79 Results ....................................................................................................................80 Soy Ingredient Composition.......................................................................80 Digestibility ................................................................................................81 Survival, Growth, and Health Performance ..............................................81 Physical Pellet Properties..........................................................................83 Discussion ..............................................................................................................84 Summary ................................................................................................................89 CHAPTER 4. PERFORMANCE OF YELLOW PERCH FED BIOPROCESSED SOYBEAN MEAL Introduction ............................................................................................................96 Methods and Materials ...........................................................................................97 Experimental Design and Diet formulation ...............................................97 Culture System ...........................................................................................98 vii Feeding Trial .............................................................................................99 Statistical Analysis ...................................................................................101 Results ..................................................................................................................101 Discussion ............................................................................................................104 Summary ..............................................................................................................105 REFERENCES ................................................................................................................113 viii LIST OF ABBREVIATIONS ADC ................................................................................. Apparent digestibility coefficient ADC-P.................................................................. Apparent digestion coefficient of protein ADC-E .................................................................. Apparent digestion coefficient of energy AOB ......................................................................................... Ammonia oxidizing bacteria ANF..................................................................................................... Antinutritional factor ANOVA ................................................................................................Analysis of variance ANCOVA ......................................................................................... Analysis of covariance BD ..................................................................................................................... Bulk density BP....................................................................................................................Bioprocessing CG ...................................................................................................... Compensatory growth °C ................................................................................................................... Degree celsius db............................................................................................................................ Dry basis DDG .................................................................................................... Distillers dried grains DDGS............................................................................ Distillers dried grains with solubles DE ............................................................................................................. Digestible energy df ............................................................................................................ Degrees of freedom DHA ...................................................................................................Docosahexaenoic acid dm ........................................................................................................................ Dry matter DO ............................................................................................................. Dissolved oxygen EAA ..................................................................................................... Essential amino acid EPA .................................................................................................... Eicosapentaenoic acid FCR ..................................................................................................... Feed conversion ratio ix FM ................................................................................................. Marine-derived fish meal g.................................................................................................................................... Gram GE .................................................................................................................... Gross energy GMO .................................................................................... Genetically modified organism HSI ....................................................................................................... Hepatosomatic index K............................................................................................... Fulton-type condition factor Kcal ......................................................................................................................Kilocalorie Kg........................................................................................................................... Kilogram L ..................................................................................................................................... Liter Lpm ............................................................................................................ Liters per minute Lys...............................................................................................................................Lysine Met ...................................................................................................................... Methionine MC ............................................................................................................. Moisture content Min ............................................................................................................................. Minute MJ ....................................................................................................................... Mega Joule m .................................................................................................................................. Meter µg .........................................................................................................................Microgram mm ....................................................................................................................... Millimeter NEAA ........................................................................................... Non-essential amino acid NFE ............................................................................................................ Non-fiber extract NOB .............................................................................................. Nitrite oxidizing bacteria NSP ............................................................................................. Non-starch polysaccharide n.................................................................................................................... Sample number x P ................................................................................................................. Probability value PDI ..................................................................................................... Pellet durability index PDII ............................................................................................Protein dispersability index PER ................................................................................................... Protein efficiency ratio RG ................................................................................................................ Relative growth SBM ................................................................................................................ Soybean meal SE ....................................................................................................................Standard error SPC ..................................................................................................Soy protein concentrate SPI ............................................................................................................Soy protein isolate VFD................................................................................................Variable frequency drive VFI ............................................................................................................ Visceral fat index VSI .................................................................................................... Visceral somatic index TAN ................................................................................................ Total ammonia nitrogen TIA ................................................................................................ Trypsin inhibitor activity TIU .....................................................................................................Trypsin inhibitor units U.S. .................................................................................................................. United States USD........................................................................................................ United States dollar UV ........................................................................................................................ Ultraviolet wb........................................................................................................................... Wet basis WSI .................................................................................................... Water solubility index xi LIST OF FIGURES Figure 1-1. Average commodity price of FM and SBM over the previous 10 years (World Bank 2014) .............................................................................................................49 Figure 1-2. Total global fish production by primary production source (FAO 2012b) .....50 Figure 1-3. Total value of U.S. Atlantic Salmon imports for the previous 26 years (USDA 2014) ......................................................................................................................51 Figure 1-4. Total world production of FM and SBM over the previous 10 years (USDA 2014) ......................................................................................................................52 Figure 1-5. General soybean protein and oil processing flow diagram (modified from Swick 1994; Brown and Hart 2010) ......................................................................53 Figure 1-6. Total production of Yellow Perch by method and source...............................54 Figure 4-1. Average relative growth (RG, %) response standardized to reference diet ([treatment average RG] – [reference average RG]). Dark bars indicate 40% FM replacement, light bars indicate 70% FM replacement. Different overhead line ranges indicate significant difference (P<0.05) among treatments. .....................112 xii LIST OF TABLES Table 1-1. Trypsin inhibitor activity (TIA) of soybeans and soy products .......................46 Table 1-2. Proximate composition of commercially processed soy products (g/100g dm except where noted) ...............................................................................................47 Table 1-3. Various Microbes, process (solid state fermentation-SSF, and liquid state fermentation-SLF), and feedstock used in fermentation of soy products. .............48 Table 2-1. Composition of the primary protein sources (g/100 g, dm unless noted) incorporated into the experimental digestibility diets for Yellow Perch ...............67 Table 2-2. Digestibility feed formulations and estimated dietary composition of the reference and test diets (g/100g, dm). Ranges are given for soy diets only ..........68 Table 2-3. Apparent digestibility coefficients (ADC) of protein (ADC-P) energy (ADCE) for test ingredients fed to Yellow Perch ............................................................69 Table 2-4. Apparent digestibility coefficients (ADC) of essential amino acids (EAA) and non-essential amino acids (NEAA) for experimental bioprocessed soy products fed to Yellow Perch ...............................................................................................70 Table 3-1. Feed formulations (g/100g dm) of the experimental Yellow Perch diets. .......90 Table 3-2. Composition of the primary protein sources (g/100 g, dm unless noted) incorporated into the experimental diets. EAA=essential amino acids; NEAA=non-essential amino acids; ANFs=antinutritional factors ........................91 Table 3-3. Analyzed diet compositions (g/100g dm unless noted) and digestibility results. ADC=Apparent Digestibility Coefficient; GE=gross energy; DE=digestible energy; PE=protein to energy ratio; PDE=protein to digestible energy ratio ........92 xiii Table 3-4. Growth performance indices. Values given are treatment means±SE. Values not significantly different (P>0.05) have the same letter within a given column. .93 Table 3-5. Necropsy variables for Yellow Perch. Values given are treatment means±SE. Values not significantly different (P>0.05) have the same letter within a given column GI=gastrointestinal distal inflammation score; HSI=hepatasomatic index; VSI=viscerasomatic index; VFI=visceral fat index ...............................................94 Table 3-6. Physical properties of the feed extrudates. Values given are treatment means±SE. Values not significantly different (P>0.05) have the same letter within a given row.............................................................................................................96 Table 4-1. Primary ingredients, fish meal (FM) replacement levels, and coding of FM and SBM treatments that are either Extruded (Ex), Bioprocessed (BP), or GMO variety ..................................................................................................................107 Table 4-2. Proximate composition, trypsin inhibitor activity (TIA), and amino acid profile of the main protein sources. Values are g/100 g dm unless noted. ANF=antinutritional factor; EAA=essential amino acid; NEAA=non-essential amino acid. ...........................................................................................................108 Table 4-3. Feed formulations and nutrient composition including only high level FM replacement (70%) treatments. All values reported as g/100 g dm .....................109 Table 4-4. Feed formulations and nutrient composition including only low level FM replacement (40%) treatments. All values reported as g/100 g dm .....................110 Table 4-5. Survival (S, %), mean relative growth (RG, %), specific growth rate (SGR), Fulton-type condition factor (K), total tank consumption (TC, g), food conversion ratio (FCR), and protein efficiency ratio (PER) for Yellow Perch fed experimental xiv diets. Values given are treatments means±SE. Significant differences (P<0.05) from one-way analysis of variance (ANOVA) are indicated by different letters within a given column ..........................................................................................111 xv ABSTRACT UTILIZATION OF SOYBEAN PRODUCTS AS FISH-MEAL PROTEIN REPLACEMENTS IN YELLOW PERCH Perca flavescens FEEDS SCOTT C. SINDELAR 2014 As a result of increasing demand, uncertain availability, and increasing cost for fish meal (FM), fish nutritionists have been driven to find alternative sources of protein. Particularly for carnivorous species such as Yellow Perch Perca flavescens (Mitchell), alternative plant-based feedstuffs have shown decreased performance compared to FM. Processed (mechanical, chemical, or microbiological) soybean products are of primary interest as alternative feedstuffs due to their availability, domestic production, low price and nutritional profile; however, use of processed soy has displayed varying degrees of success. Novel soy ingredients created through bioprocessing technology potentially provide more highly digestible nutrients with fewer anti-nutritional factors (ANFs) than traditionally processed soy products. To examine the utility of certain bioprocessing technologies, ingredient compositions were compared and incorporated into three Yellow Perch feeding trials. The first feeding trial was completed to measure apparent digestibility of protein and energy of commercial and experimental bioprocessed soybean meal (BP-SBM), and other common feed protein ingredients. Bioprocessing consistently upgraded the bioavailability of protein in defatted soybean meal, while commercially bioprocessed xvi Hamlet HP 300 provided the highest digestibility of all soy products tested. Extrusion as a pretreatment to bioprocessing had a negative effect on digestibility. The second experiment was a 14-week feeding trial to evaluate growth performance, digestibility, and organosomatic responses of Yellow Perch fed diets containing commercial alcohol-washed soy protein concentrate (SPC), bioprocessed soy white flake (BP-WF), or extrusion pretreated BP-WF as complete FM replacements. Each soy protein source was replicated in diets with and without supplemental lysine + methionine. BP diets consistently performed better than SPC diets. Extrusion pretreatment led to improved consumption and growth performance over unextruded products. Lysine and methionine supplementation further improved growth. SPC diets provided the best feed conversion ratio (1.62) and highest apparent digestibility of protein (91.8%), but examination of anatomical characteristics revealed significant deficiencies in fish fed SPC diets. In the final 16-week feeding trial we evaluated growth performance, feed intake, and organosomatic responses of Yellow Perch fed diets containing various processed SBM products. Treatment factors included soybean variety (GMO or non-GMO), extrusion pretreatment, BP, and FM replacement levels (40 and 70%). An FM control and 14 soy-based diets were formulated on a dry matter basis to contain similar crude protein (45%), lipid (9%), and gross energy (20.9 MJ/Kg). Five soy treatments displayed higher relative growth (RG) than the FM control diet and nine were lower. A non-GMO, nonextruded, BP-SBM provided enhanced growth at both inclusion levels when compared to FM. Both varieties of commercial SBM provided similar growth to the reference diet at the low FM replacement level, but growth was depressed at the higher level. 1 CHAPTER 1. ALTERNATIVE FEEDSTUFFS IN AQUACULTURE NUTRITION RESEARCH Introduction The future of aquaculture and aquafeed industry growth will depend greatly on the use of alternative ingredients to displace fish meal (FM) and fish oil (FO) (Glencross et al. 2007; FAO 2012a, 2014). FM has been a primary driver of high feed costs, which can comprise over 50% of total production cost (FAO 2009). In June of 2014, the average price of 64-65% protein FM ($2,001 per metric ton) was approximately 386% greater than the price of soybean meal (SBM, $519 per metric ton) (Figure 1-1; World Bank 2014), and within the next decade, FM and FO price are forecasted to minimally increase by 50% (FAO 2012a, 2014). Grain production is more stable and efficient than FM production and will continue to cost much less than fixed supplies of FM products (FAO 2012a, 2014). Recent development of aquafeeds has been significant, which is apparent from decreasing feed conversion ratios (FCR); 29.2 million tons were produced in 2008 with substantial increases forecasted (FAO 2012a). World population growth has created an increased demand for seafood, a source of high quality protein, which has been supported with increased aquaculture production (Figure 1-2). The worldwide aquaculture industry has sustained an average growth of 8.8% per year for the last three decades, greater than any other food production sector (FAO 2012a). For example, aquaculture production of Atlantic Salmon Salmo salar has greatly surpassed production through wild capture fisheries, and has sustained a rapidly growing import value for the previous 26 years (Figure 1-3). In 2013, the United States imported $33.2 billion USD in seafood and other fisheries products (edible and non- 2 edible) while $23.0 billion was exported, creating a trade deficit of $10.2 billion (NOAA 2013). The U.S. contributes very little to world aquaculture volume compared to several other countries around the world; especially China, which produced 60% of global aquaculture volume in 2010 (FAO 2012a). Conversely, the U.S. imports at least 60% of all fish products, including seafood, FM and FO, which were valued collectively at $17.5 billion in 2011 (FAO 2012a). By the year 2020, the world will require an estimated 23 million tons of seafood and other fish products if the current per-capita consumption trend continues (FAO 2012a). The most recent global production data (USDA 2014), shows that approximately 193 million metric tons more SBM was produced than FM, and over the past 10 years SBM production increased by 126%, while FM production decreased by 35% (Figure 14). Although seafood production from wild-capture fisheries has remained relatively constant (FAO 2014), production of both FM and fish oil from marine-derived sources have shown reduced volumes in recent years and are forecasted to continue falling (Jackson 2012). Additionally, aquaculture that utilizes FM as a primary protein source actually consumes more volume of FM for feeding than volume in fish produced (i.e. fish in:fish out; Naylor et al. 2000). Competition for FM and FO used in swine, poultry, ruminants, and companion animal feeds also exacerbates inconsistency and uncertainty in future availability. Additionally, the European Union’s stringent regulations including banning on the use of animal-derived ingredients in feeds for ruminant animals destined for human food (EU Regulations, 2009) has also compelled research on improving plant ingredients for monogastrics. Understandably, the future development of aquafeeds and 3 aquaculture cannot sustainably utilize FM and fish oil as primary ingredients and maintain cost-effective production. In addition to sustainable and economic production, the ultimate goal of plantbased feed research is to produce highly bioavailable feeds that are low-polluting and provide growth performance equivalent to FM-based feeds. Culture of carnivorous fishes is particularly challenging given high quality nutrient requirements. Plant-based aquafeeds have been successful in many omnivorous aquaculture species, such as carp and tilapia (FAO 2009); however, carnivorous species such as Rainbow Trout Oncorhyncus mykiss and Yellow Perch cannot utilize raw plant material effectively (Gatlin et al. 2007; Yamamoto et al. 2010). There has been considerable aquaculture research on a variety of processed plant feedstuffs including soybeans (Kaushik et al. 1995), canola (Higgs et al. 1982), lupin (Glencross et al. 2003), corn (Webster et al. 1991), and others (Aslaksen et al. 2007). The high available protein content of soybeans and soy products make them one of the most valuable alternative ingredients for carnivorous fish diets. Additionally, high production and availability makes soybeans the most commonly used plant protein in aquaculture feeds. However, the upper limit of inclusion for defatted SBM is between 20-30% in carnivorous fish diets (Storebakken et al. 2000). Without further processing, SBM and other plant products contain high levels of indigestible complex carbohydrates such as fiber, oligosaccharides, and other non-starch polysaccharides (NSPs), which are not efficiently utilized by carnivorous fish. Other antinutritional factors (ANFs) such as trypsin inhibitors and phytate found in plant materials can also have negative impacts on fish growth and health. For this reason, plant ingredient processing techniques are 4 essential to minimize carbohydrates and ANFs, meanwhile increasing usable nutrients (Gatlin et al. 2007). Soy protein concentrate (SPC) or soy protein isolate (SPI) products are better utilized by carnivorous fish (Storebakken et al. 2000). However, high price hampers use of SPC and SPI as complete FM replacements. Local sourcing of ingredients can also facilitate a more consistent supply and lower shipping costs. Biotechnology is rapidly expanding in several industries, and has created great interest in the economic production of enhanced soy and other feed products (Pandey et al. 2000; Chen et al. 2013). In the U.S., soybeans are one of the largest and most important oilseed commodities, with the Midwestern states producing the majority of soybeans and soybean products (USDA 2007). Iowa, Illinois, Minnesota, Indiana, Ohio, Nebraska, Missouri, South Dakota, North Dakota, and Arkansas continue to be the to be the top 10 producers, which collectively account for 82.8% of the total domestic soybean production (USDA 2007). Because soybean products are considered to be the most promising alternative to FM (Dersjant-Li 2002), there is considerable opportunity to develop new aquafeed markets using plant-based alternative ingredients. Additionally, aquaculture production is progressing in the Northern Great Plains, and the development of sustainable, alternative feed production is well supported by the soybean industry (USSEC 2008). The purpose of this research is to assess composition, nutrient availability, and fish performance responses to several soybean products produced through various commercial and novel processing technologies. The ultimate goal is reducing dependence on FM while stimulating the advancement of aquaculture for a relatively undeveloped 5 aquaculture species (Yellow Perch). This research also supports improving food sustainability and security for a rapidly growing population. Increasing global food demand requires more efficient food production technologies that improve the sustainability of earth’s renewable natural resources. Hypotheses and Research Objectives Four main objectives were developed to examine the utility of different soy processing technologies when used to replace FM in Yellow Perch feeds. Initially we characterized composition with in vitro chemical analysis (Objective 1), progressing to in vivo bioavailability (Objective 2), and ending with complementary growth, health, and feed intake trials (Objectives 3 and 4). Based on a literature review of alternative feedstuffs, bioprocessed soy has been shown to have beneficial properties for carnivorous fish like Rainbow Trout (Yamamoto et al. 2010), Atlantic Salmon (Refstie et al. 2005), Hybrid Striped Bass Morone chrysops x M. saxatilis (Rombenso et al. 2013) and sensitive life stages of other domestic food animals (Hung 2008). Therefore, we hypothesized that bioprocessing would significantly affect the performance and efficiency of soy products in aquafeeds for Yellow Perch. Consequently, the primary research objectives included: 1) Analysis of nutrient composition and antinutritional factors (ANF) of FM, commercial SPC, and various forms of bioprocessed soybean meal (BP-SBM). The scope of analysis included proximate composition, amino acids, minerals, and primary ANFs. Commercial and bioprocessed ingredients were selected based on differences in primary processing method. 6 2) Characterize primary nutrient bioavailability by utilizing in vivo apparent digestibility determinations for nutrients in Yellow Perch feeds. Apparent digestibility trials were completed for each main ingredient to determine potential inefficiencies, processing effects, and also to provide recommendations for future feed formulations based on digestible nutrients. 3) Evaluate Yellow Perch growth performance using practical feeds replacing FM with commercial or bioprocessed soy products. Growth performance, health, and feed intake were compared in two feeding trials. Supplements and inclusion rates were also investigated using factorial designs. Soybean Products Soybeans Glycine max are legume oilseeds that have long been recognized as an alternative or supplemental protein source to fish meal (FM). Soybean products (proteins, oils, and lecithin) have shown promising results in several aquatic species, and some soy products are routinely used in commercial feeds (Forster 2002). Soybean products are generally preferred over other plant products, due to their high protein content, favorable amino acid profile, high digestibility, low cost, consistency and domestic availability. Additional to nutrition, the physical characteristics of soy provide functional benefits for food and feed production (Thomas and Poel 2001; Dersjant-Li 2002). Whole soybeans provide a substantial amount of protein (35-40% db) and lipid (17-25%) (Wolf 1970). Whole beans are more valuable when separated into their constituent carbohydrates, protein, and oil (Peisker 2001; Chen et al. 2013). Beans are first crushed into flakes and the hulls are then removed which creates white flake (WF) 7 (Peisker 2001). Soybean oil is subsequently solvent extracted leaving soybean meal (SBM), which is the most common soy product used in animal feeds (Drew et al. 2007). Soy protein concentrates (SPC) and isolates (SPI) are further refinements of the soybean’s valuable protein (Peisker 2001). Soybeans often provide a more compositionally consistent product than FM; however, soy products can vary in composition depending on growing conditions, genetic strain and processing conditions (Swick 2007). These variations can influence price and quality of soy products (Swick 2007). Like most plant ingredients soybeans are especially well known to differ in nutritional characteristics depending on soil type, precipitation, climate, and cultivar. In lupin products for example, the digestibility of protein and energy differs substantially between cultivars (Glencross et al. 2004). Soybean strains developed and grown in the U.S. generally provide a higher lysine to crude protein ratio than other strains (Swick 2007). Due to high levels of proteins and stachyose sugars, soybean plants are also known for their ability to undergo periods of desiccation, and then continue to grow when conditions are more favorable (Blackman et al. 1992). However, the components that protect the plant (e.g., stachyose, trypsin inhibitors) are not utilized or are inhibitory in carnivorous fishes and therefore must be removed through processing. Several indigenous or genetically modified soybean strains have been found to contain varying amounts of antinutritional factors and oligosaccharides (Parsons 2000), which may be more suited for carnivorous fish feeds (Gatlin 2007). Beneficial effects of soy processing on growth and digestibility have occurred in herbivorous, omnivorous, and carnivorous fishes (Kim and Kaushik 1992; Gatlin 2002). 8 Various soy processing technologies affect ANFs differently, and their removal can improve digestibility, palatability, and growth performance. One of the primary processing technologies used to inhibit ANFs is thermal treatments. ANFs can be either heat stable or heat labile, whereby the latter can easily be removed by commercial toasting methods for SBM (Francis et al. 2001). Thermal treatments, however, can also damage proteins making them unavailable for fish for growth (Glencross et al. 2007). Lysine is one of the amino acids most susceptible to overheating, and the total amount of lysine can diminish. The lysine to crude protein ratio or a reactive lysine assay are common methods used to test for heat damaged soy products (Fontaine et al. 2007). Other approaches to test the degree of soy processing include urease activity, protein dispersibility index (PDII), and potassium hydroxide solubility (Batal 2000). The sulfur amino acids and threonine have also been found to be sensitive to heat damage (Dhurandhar and Chang 1990; Olli et al. 1994b). Heat stable ANFs include saponins, NSPs, antigenic proteins, phytoestrogens, and phenolic compounds (Van der Poel 1989) and must be removed using other processes such as alcohol washing, activated carbon exposure, or chromatography. Heat damage has also been associated with color, where lighter color indicates higher availability of lysine. For example, darker color of dried distillers grains with solubles (DDGS) was found to have reduced amino acid digestibility in swine and poultry (Fastinger and Latshaw 2006; Fastinger and Mahan 2006). There are several other processes that can enhance the quality of protein. For example, creating shorter-chain peptides or reducing allergenic protein fractions is important. For this reason, PDII is commonly used as a measure of soy protein quality as well as a measure of heat damage (Lusas and Riaz 1995; Thomas and Poel 2001). Higher 9 PDII values typically indicate higher solubility, higher enzyme activity, higher ANFs, and lower protein efficiency in animals (Horan 1974; Lusas and Riaz 1995). However, Barrows et al. (2007) found no significant relationship between PDII and growth of Rainbow Trout. The carbohydrate fraction of soy is made up of sucrose, oligosaccharides (αgalactosides), and mostly (20-30% of defatted SBM) non-starch polysaccharides (NSPs; i.e. cellulose, hemicellulose, pectin, β-glucans, and gums) (Krogdahl et al. 2005; Gatlin et al. 2007;Choct et al. 2010). Certain carbohydrates such as hemicelluloses, pectins, and starches are also useful pellet-binding agents (Krogdahl et al. 2005). Other carbohydrate fractions such as sucrose, are simple sugars which readily available to fish. Oligosaccharides and most NSP’s are more complex and are indigestible by most fishes (Refstie et al. 1998; Krogdahl et al. 2005; Choct et al. 2010) and other monogastric animals (Zdunczyk et al. 2011). The primary carbohydrate fraction in soy is NSP, which is associated with reduced protein and lipid digestibility (Refstie et al. 1999) as well as a positive correlation with increased water content of feces (Gatlin et al. 2007). NSPs have also been linked to soy-induced enteritis in salmonids (Bureau et al. 1998; Yamamoto et al. 2008), but it appears that inflammation might be reversible if subsequently fed an FMbased diet (Baeverfjord and Krogdahl 1996). Hybrid Striped Bass Morone saxatilis x M. chrysops (Gallagher 1994) and Rainbow Trout (de la Higuera et al. 1988) were also found to have reduced feed intake when fed high levels of NSP. Oligosaccharides occur in SBM primarily in the forms of sucrose (6-7%), raffinose (1-2%), and stachyose (5-6%) (Francis et al. 2001). These complex 10 oligosaccharides can have a prebiotic effect by creating a fermentable substrate for beneficial gastrointestinal microflora (Zdunczyk et al. 2011). However, the majority of these sugars are generally considered antinutritional (Francis et al. 2001) and should be kept at low dietary levels for all carnivorous fishes. Salmonids in particular are known to exhibit a species-specific response to dietary oligosaccharides (Francis et al. 2001). Beyond direct oligosaccharide inefficiencies, their removal has also been reported to improve digestibility of the NSP portion in poultry diets (Slominski et al. 1994). Antinutritional Factors The use of soy products in carnivorous fish feeds is met with difficulty because soybeans, like other plant products, contain several ANFs including protease inhibitors, lectins, phytic acid, saponins, phytoestrogens, antivitamins, and antigenic compounds (Francis et al. 2001). ANFs including NSPs and oligosaccharides are contained in various levels in all plant products, and are created by the plant to protect itself from harmful substances, environmental conditions, or predation from insects or herbivores (Osagie and Eka 1998; Enneking and Wink 2000). Strategies for reducing ANFs or reducing the impact from ANFs include processing (e.g., heating, fermentation), genetic manipulation (e.g., artificial or natural selection), and diet supplementation (e.g., enyzmes) (Enneking and Wink 2000). One of the most inhibitory and important of the ANFs are protease inhibitors, which directly disable the activation of digestive enzymes and reduce feed efficiency (Francis et al. 2001). Trypsin inhibitors (Table 2-1) are well known protease inhibitors that inhibit the activation of two protease enzymes: trypsin and chemotrypsin (Norton 11 1991). Trypsin is a powerful serine protease (digestive enzyme) produced in the pancreas, which cleaves peptide bonds of proteins into smaller peptides or amino acids, which can then be absorbed through the intestine and used for growth (Hedstrom 2002). Inhibition of trypsin protease activation leads to reduced digestion, thus decreasing overall feed efficiency. Soybeans contain two groups of trypsin inhibitors: the Kunitz trypsin inhibitor and the Bowman-Birk protease inhibitor (Francis et al. 2001). The Bowman-Birk inhibitor can block two protease molecules and is also more heat-stable than the Kunitz inhibitor, which can block only one protease molecule (Norton 1991). The Kunitz inhibitor is also more sensitive to acid treatments (Francis et al. 2001). Generally typical thermal treatments for SBM or SPC reduce most of the trypsin inhibitor activity (TIA). Extrusion cooking has also been shown to reduce TIA (Romarheim et al. 2006). Sensitivity of TIA is particularly high in carnivorous fishes. Impairments in Rainbow Trout digestion have been attributed to inhibition of both trypsin (Sandholm et al. 1976) and chemotrypsin (Dabrowski et al. 1989). Fish have also been shown to respond to protease inhibitor activity by secreting more trypsin and chemotrypsin, or increasing the surface area of the intestine (Dabrowski et al. 1989; Olli et al. 1994a; Francis et al. 2001). For most fish, trypsin inhibitor amounts below 5 mg/g do not seem to inhibit digestibility significantly as enough extra proteases can be produced to mitigate the inhibitory effect (Francis et al. 2001). However, soybean meal has been reported to contain up to 15.0 mg/g of trypsin inhibitors (Gao et al. 2013). Phytate is the major form of phosphorus storage in plants (Han and Wilfred 1988). Phytate (also known as phytic acid or inositol) is a heat-stable cyclic compound that is found in almost all soy products unless enzymatically hydrolyzed (Liener 1994). 12 Soybeans and typical processed soy products regularly contain 1-2% (db) phytate (Liener 1994; Francis et al. 2001). This organic phosphorus is unavailable in monogastrics and prevents phosphorus utilization as well as other di- and trivalent metals such as calcium, magnesium, zinc, copper and iron (Liener 1994; Francis et al. 2001). Additionally, phytate can form into phytate-protein complexes which reduce protein digestibility, as well as inhibit nutrient absorption due to toxic damage in the pyloric ceca (Francis et al. 2001). Phytate also contributes to phosphorus pollution contained in effluent (Cain and Garling 1995). Richardson et al. (1985) found dramatic changes is health, growth, and mortality of Chinook Salmon Oncorhynchus tshawytscha due to dietary phytate. Those researchers found that 25.8 g/kg dietary phytate increased mortality, depressed growth, protein efficiency ratio, and thyroid function, as well as caused cataract formation and increased vacuolization in the pyloric caeca (Richardson et al. 1985). Therefore, it appears phytic acid is extremely detrimental to salmonids and possibly other carnivorous fish at elevated levels. Usually phytate is found in SBM at lower levels than above, and does not result in dramatic responses in most fishes (Francis et al. 2001). Due to the concern about mineral deficiency and inefficiency when feeding soy products containing phytate, the phytase enzyme is often included in dietary formulations. Phytase can be produced through microbial fermentation methods and subsequently purified (Han and Wilfred 1988). Hydrolyzing the phytate with phytase during fermentation can significantly increase the availability of inositol as well as inorganic phosphorus (Han and Wilfred 1988). Dietary exogenous phytase enzymes have also been added into the diets of Rainbow Trout, which substantially improved phosphorus availability of phosphorus in both SBM and FM-based diets (Riche and 13 Brown 1996). The maximum suggested amount of phytate in salmonid diets is about 5-6 g/kg (Francis et al. 2001). Soybean lectins, or soybean agglutinin (SBA) are glycoproteins which are present in soy protein products (Liener 1994) and soy oil (Klurfeld and Kritchevsky 1987), and have been found to cause major digestive problems in rats; however, little information exists on their effects on fish (Lajolo and Genovese 2002). It is known that the SBA protein fraction is resistant to digestion in fish (Francis et al. 2001). One study found that SBA has the ability to disrupt brush border surfaces of the intestine of Atlantic Salmon (Hendriks et al. 1990). SBA are normally heat-labile, and denaturation requires moist heating of at least 100°C for 10 min (Francis et al. 2001). The destruction of lectin also typically parallels that of TIA, but there may be vast differences in lectin levels depending on the soybean genetic strain (Liener 1994). Saponins are heat stable steroid or triterpenoid glycosides including galactose, arabinose, rhamnose, glucose, xylose, and glucuronic acid (Francis et al. 2001; Liener 1994). Both positive and negative effects from saponins have been alleged (Liener 1994). Saponins exist in defatted toasted SBM up to 67 mg/kg (Fenwick et al. 1991). Saponins have been linked to bitter taste (Liener 1994), significant intestinal damage, and when dissolved in water can damage the respiratory epithelium of the gills (Bureau et al. 1998; Francis et al. 2001). Other research has shown that saponins in solvent-extracted soybean products did not produce significant negative effects on performance of Atlantic Salmon (Krogdahl et al. 1995). Saponins have also been found to inhibit the chemotrypsin protease, which resulted in reduced hydrolysis of total protein and allergenic proteins (glycinin and β-conglycinin) (Shimoyamada et al. 1998). Although more research is 14 needed on species-specific responses to saponins, recommended levels for most species are below 1 g/kg of diet (Francis et al. 2001). Phenolic compounds such as tannins, phytoestrogens, and others (e.g., syringic acid) are believed to play an important role in creating adverse organoleptic properties in plant products, as well as affect normal bodily functions of animals (Liener 1994). Tannins are generally lower in soybeans (0.45 g kg-1) than in other legumes (e.g., up to 20 g kg-1 in faba beans) and so little attention has been paid to this ANF in regard to soybean products (Liener 1994). Phytoestrogens are also present in soybeans, usually in the form of glycoside isoflavones (Francis et al. 2001). Their levels in soybean products are typically low enough to cause little harm, but processing can concentrate some isoflavones, in particular genistein (Liener 1994). These compounds can disrupt a wide variety of body functions involving reproduction, as do other estrogens. Therefore, careful management of phytoestrogens may be important for brood stock and early life stage feeds. Additionally, phenolic compounds can be removed from soy products using activated carbon, which results in improved odor and flavor (How and Morr 1982). Antivitamins are also contained in raw soybean products, but are typically heat labile and inactivated with a proper thermal treatments (Liener and Kakade 1980). Heat labile antivitamins contained in untoasted soy products can inhibit availability of vitamin B12, vitamin D, and potentially vitamin E (Liener 1994). However, there has been some indication that lipoxygenase decreases the availability of vitamin A and carotene whether or not a thermal treatment was done (Shaw et al. 1951). In humans and other animals, allergenicity to unheated soybean products can also be a problem, but most of the immunochemical reactivity in soybean products is 15 eliminated with heat treatment. Immunologically active allergenic compounds include glycinin and β-conglycinin, which make up a large portion of soy protein (Liener 1994) and have been shown to negatively affect rainbow trout growth performance (Rumsey 1993). These compounds have also been found to cause intestinal mucosal legions, villi abnormalities, intestinal enteritis, compromised immune responses, and abnormal flow of digesta through the intestine (Krogdahl et al. 2000). Processing Methods Processing technologies are necessary to transform soybeans into usable products for a wide variety of applications including food, fuel, and other goods. Typical soybean processing consists of several steps (Figure 1-1). Soy products are primarily sold as ingredients for remanufacturing into other products or feeds with the exception of a few products such as edamame or meat substitutes such as texturized soy protein for human consumption. Most soybeans grown in the U.S. are processed for oil removal, which is used in biodiesel production as well as food products such as vegetable oil for use in a wide variety of processed foods. Processing may alter the nutritional, functional, and antinutritional aspects of an ingredient (Table 1-2). While one processing approach can provide a soy product with adequate nutritional characteristics for one species, the same product does not always provide a similar result in a different species. For this reason, the characterization of ingredient processing technology is important to consider in relation to digestibility and growth performance studies (Glencross et al. 2007). In addition, processing can also affect the palatability of soy products. Soybean meal may impart a “beany” flavor, which 16 is caused by certain carbohydrates that can be removed by selective processing (Forster 2002). Full-fat flours and grits The first step in soybean processing is selecting, cleaning and sizing the beans to remove any unwanted material. The hulls are then removed by aspiration after cracking or crushing the bean. Hulls offer little value in diets for carnivorous fish, and are sold loose or pelleted as low-value “filler” ingredients for ruminant feeds. Dehulling (NSP reduction) has a large impact on improving digestibility in monogastrics and also increases the nutritive value of plant products (Booth et al. 2001). The product after dehulling is referred to as full-fat white flakes which can be ground, extruded, micronized, or roasted to create full fat products, which contain about 35.2% crude protein (wb) (Swick 2007; NRC 2011). Full-fat products generally are avoided in animal feeds due to their “beany” flavor created by lipases, primarily lipoxygenase (Lusas and Riaz 1995). Many times, soy products can have refined soy oil or lecithin added back to the products from which the crude oil was previously extracted (Lusas and Riaz 1995). Soy Oils At this step in the process, the oil is extracted from soybeans by exposing full-fat white flake to a fat extraction system using hexane (most common) or other solvents (Muller and Schweiger 1973; Lusas and Riaz 1995; Brown and Hart 2010). Crude oil can also be extracted by mechanically extracting, or “expelling”, which is not as efficient as 17 solvent extraction (Brown and Hart 2010). Expelled soy products typically contain higher oil (4-9%) than solvent extracted products (<1%) (Kasper et al. 2007; Brown and Hart 2010). Oil is a valuable component of the soybean, and is commonly used for biodiesel, cooking, and other uses (Singh et al. 2008). Soy oil is regarded as a good source of energy and n-6 fatty acids in fish feeds; however, soy oil lacks adequate long-chain (2022 carbon) n-3 fatty acids necessary for normal growth and health in species incapable of desaturating and elongating shorter (18 carbon) n-3 fatty acids (Storebakken et al. 2000). However, linoleic acid, phospholipids and natural antioxidants found in soy oil are beneficial to fish (Storebakken et al. 2000; Swick 2007). Beneficial linoleic acid is concentrated up to approximately 54% in crude soy lecithin (Hertrampf and PiedadPascual 2003). Soy lecithin is primarily composed of phospholipids, which are indispensable nutrients for fishes. The primary soy oil phospholipids include phosphatidylcholine, phosphatidylethanolamine, and phosphatidylinositol (Hertrampf and Piedad-Pascual 2003). The crude soy oil can be further processed with a de-gumming process by adding water to heated oil, which binds to lecithin and creates a gum that is then separated from the soy oil (Hertrampf and Piedad-Pascual 2003). The gum or “sludge” can be purified by various additional methods until either a standardized soy lecithin composition is obtained or a pure, de-oiled lecithin is created (Hertrampf and Piedad-Pascual 2003). 18 Soybean White Flake The majority of soy product produced comes in the intermediate form of defatted white flakes (WF). These are created after exposing full-fat flakes to the hexane lipid extraction process. WF can then be ground to make soy flour, toasted to make SBM, or further processed to produce SPC or SPI. Defatted soy flour usually contains a minimum of 50% protein on a wet basis (Lusas and Riaz 1995). WF can have extremely high PDII values of 95, but can also be produced with PDII’s of 20, 70, or 90, depending on the thermal exposure (Lusas and Riaz 1995). Therefore, adequate thermal treatments of WF are recommended for use in carnivorous fish feeds to reduce PDII and ANFs. Soybean Meal Typically, defatted WF is flash desolventized using steam, followed by a toasting process to drive off any residual solvents which are collected in a vacuum (Swick 2007). This toasting process also inactivates certain heat-labile antinutritional factors (ANFs) such as proteinase inhibitors (NRC 2011). The product after toasting is the industry standard SBM (dehulled, solvent extracted, desolventized and toasted) and on average contains about 48.5% (wb) protein (NRC 2011) and a low PDII of 10-50 (Lusas and Riaz 1995). SBM also contains approximately 5-8% (db) oligosaccharides (Zdunczyk et al. 2011). Dehulled, defatted, toasted SBM provides adequate protein for most carnivorous fish diets, and a favorable amino acid profile with methionine being the first limiting amino acid (NRC 2011). However, cysteine is generally higher in SBM, which reduces the influence of low methionine. These two amino acids are considered semi-essential or 19 conditionally essential, and their amounts are often added together and considered as total sulfur amino acids (NRC 2011). SBM is a popular component in herbivorous and omnivorous fish dies and is sometimes included at high levels (Gatlin 2002; NRC 2011). Carnivorous fishes have a low tolerance for SBM, and require further processing (van den Ingh et al. 1991; Olli et al. 1994b; Baeverfjord and Krogdahl 1996; Kasper et al. 2007). Extruded Soy Protein Extrusion is often used to create texturized soy protein from soy flours or SPCs (Lusas and Riaz 1995; USSEC 2008). This is accomplished by plasticizing the ingredient at high temperature (120-180°C) and pressure within the extruder barrel (Lusas and Riaz 1995). When the product exits the die, immediate depressurization causes expansion, creating a texturized structure similar to meat (Lusas and Riaz 1995). Typically, extruded products contain a similar protein and lipid content as the starting material (Lusas and Riaz 1995). Extrusion of soy products has been shown to improve digestibility and growth performance when included in carnivorous (Romarheim et al. 2006; Barrows et al. 2007) or omnivorous (Allan and Booth 2004) fish diets. Extrusion cooking has been found to improve carbohydrate digestibility through gelatinization of starch and fiber (Björck et al. 1984). The conditions of the extruder (e.g., temperature, moisture, screw speed, retention time) can be manipulated to cause desirable physical and chemical changes within the extrudate (Fallahi et al. 2014). This allows a greater susceptibility to enzymatic 20 hydrolysis (Björck et al. 1984; Karunanithy et al. 2012) either by gastrointestinal enzymes, or through fermentation. The extreme temperature and pressure during extrusion can also reduce soy ANFs such as trypsin inhibitor activity (Barrows et al. 2007) and phytic acid (Allan and Booth 2004). Extrusion has also improved the digestibility of other legume seeds (Bangoula et al. 1992; Burel et al. 2000b). Soy Protein Concentrate SPC can be produced from either WF or SBM (Muller and Schweiger 1973), but is typically produced from WF (Lusas and Riaz 1995), and contains on average 63.6% (wb) protein (NRC 2011). The United States Soybean Export Council (USSEC) describes high-quality SPC as having a minimum of 65% (wb) protein (USSEC 2008). The primary purpose of an SPC process is to reduce strong-flavor components and flatulence sugars contained in WF and SBM; however, other soluble compounds and minerals are also extracted (Lusas and Riaz 1995). This creates a bland product, which is preferred because it readily inherits flavors of other ingredients when mixed into a feed blend. In the traditional process, WF is desolventized and the material is passed through an ethanol extractor, which removes some carbohydrates and ANFs, while concentrating protein and fiber (Swick 2007). The material can then be optionally neutralized to pH 6.5-7 after the acidic ethanol-water wash, dried, and milled (Lusas and Riaz 1995). The ethanol extraction solution and processing time may also be modified to produce a “low antigen, feed-grade” SPC (USSEC 2008). 21 SPC has provided promising results in carnivorous species like Atlantic Salmon, likely due to additional heating and the removal of oligosaccharides and other alcoholsoluble components (Olli et al. 1994b). Additionally, SPC processing creates a more concentrated and balanced amino acid profile, which makes SPC a more valuable feed ingredient. SPC generally contains fewer soluble carbohydrates, lectins, trypsin inhibitor activity, glycinin, β-conglycinin, and saponins than regular SBM (USSEC 2008). Ingh et al. (1996) completed an experiment where the alcohol-soluble extract (which contained oligosaccharides, saponins, and other unidentified factors) was added to an Atlantic Salmon diets containing either no SBM, 26% untoasted SBM, or 26% toasted SBM. The authors found that SBM diets resulted in intestinal morphology changes, while the FM control did not. In a study done by Bureau et al. (1998), Chinook Salmon suffered from severe intestinal damage when fed alcohol-soluable extract, but it had minimal impact on Rainbow Trout. Therefore, the alcohol washing process of SPC must remove heat stable antinutritional components of soybeans, but there are obvious differences in speciesspecific responses to the ANFs. Commercial alcohol/water washing procedures are known to remove the majority of the heat stable oligosaccharides (Choct et al. 2010), and an enzymatic process is not required for removal (Slominski et al. 1994). However, alcohol/water washing is not completely efficient at removing oligosaccharides from SPC. Often, SPC contains about 3% (db) total oligosaccharides (Zdunczyk et al. 2011). 22 Soy Protein Isolate Soy protein isolate (SPI) is the most purified protein produced in soy processing, which contains about 80.7% (wb) protein (NRC 2011), and is created by dissolving and precipitating proteins from defatted white flake in a pH 6.8-10 alkali solution (Lusas and Riaz 1995). The precipitate centrifuged to remove fiber, acid precipitated (pH 4.5), and centrifuged again to create a curd. The curd is then optionally neutralized to pH 6.5-7 and spray-dried to create SPI (Lusas and Riaz 1995). SPI can also be processed further into globulins, which are highly affected by pH and salinity (Lusas and Riaz 1995). Sometimes prior to spray drying, the curd is treated with enzymes or chemicals (Lusas and Riaz 1995). This SPI processed is commonly used as a whipping enhancer in aerated confectionary food products such as marshmallows, while non-enzyme treated SPI can be used in creamer or yogurt (Kolar et al. 1979; Lusas and Riaz 1995). As a feed ingredient, SPC is preferred over SPI because the increased price is not substantiated by fish performance. Additionally, SPI has also been found to produce similar digestibility compared with SPC in Rainbow Trout (Glencross et al. 2005). SPI which was processed with reduced phytate and phenolic compounds was found to have increased in vitro pepsin digestibility (Ritter et al. 1987). Only trace amounts of oligosaccharides remain in SPI’s (Zdunczyk et al. 2011). Bioprocessed Soy Protein Recently there has been interest in utilizing the alcohol/water soluble portion in the creation of an ethanol coproduct from fermentation (Karunanithy et al. 2012). The development of novel bioprocessing methods that could eliminate ANFs further than the 23 typical alcohol-washing process, meanwhile producing a valuable fuel source, could potentially yield a much more efficient, and economical SPC manufacturing process. Removal of the costly alcohol washing step could also provide an opportunity to reduce the overall cost of a complete feed. The protein content (about 55-65% wb) of these products is typically less, however, than ethanol-extracted SPC (Swick 2007). Bioprocessing technologies can eliminate the need for the alcohol washing solvents, thus significantly reducing the cost of processing. A variety of microbes, conditions, and feedstocks have been tested in soy bioprocessing (Table 1-3). Enzyme hydrolysis and/or fermentation can also be used to produce SPC alternatively to alcohol washing, and these methods have been shown to not only convert carbohydrates, but also hydrolyze phytate and allergenic proteins, making the protein fraction more digestible (Swick 2007) and increasing mineral availability (Liener 1994). Additionally, hydrolysis can reduce peptide length of the final product (Swick 2007). Fermented soy ingredients have been shown to reduce various physiological and morphological abnormalities in Rainbow Trout, normally caused by feeding commercial soybean meal (Yamamoto et al. 2010). Fermentation processes are often characterized as either submerged liquid fermentation (SLF) or solid state fermentation (SSF) (Mienda et al. 2011; Subramaniyam 2012), although moisture content and solid loading rates lie on a continuum. The SSF process minimizes the energy inputs required for drying which results in the most cost effective and environmentally friendly process (Mienda et al. 2011). However, certain microorganisms require high moisture content, and SLF has the potential to eliminate 24 water-soluble ANFs in the separation of mash and water. Both SLF and SSF processes can reduce indigestible and antinutritional components in soy products. Gao et al. (2013) used SSF to show a reduction in trypsin inhibitors from 15.0 mg/g in untreated SBM down to 1.6 mg/g in fermented SBM. Song et al. (2008) used SLF for SBM to demonstrate a significant reduction in the β-conglycinin subunits and subsequently a greatly reduced immunoreactivity in humans. Gao et al. (2013) determined that SSF with Aspergillus oryzae degraded trypsin inhibitors in SBM significantly better than with Lactobacillus brevis. In other studies, SSF with Lactobacillus sp. lowered phytate, reduced intestinal inflammation, and improved digestibility of starch and fat for wheat flour, barley flour, or defatted soy WF when included in extruded Atlantic Salmon feeds (Refstie et al. 2005; Skrede et al. 2002). Although bioprocessed products have been successful, the industry is in its infancy and continued research in biotechnology is necessary to reduce the influence on carbohydrates and other ANFs present in soybeans and soy products. Yellow Perch Culture The increasing global demand for food is straining the earth’s capacity to sustain natural food supplies, and animal protein production has recently focused on the efficiencies in aquaculture production. Because of their aquatic environment, fish have lower basal energy needs, and provide better feed conversion ratios than farmed terrestrial animals (Kaushik and Seiliez 2010). Accordingly, aquaculture is the fastest growing food production sector in the world (8.8% per annum); meanwhile, worldwide capture fisheries are static or decreasing (FAO 2012a; FAO 2014). Aquaculture of 25 species such as Atlantic Salmon successfully produces far more human food (>99%) than taken through capture fisheries (FAO 2014). The research presented in this thesis is primarily focused on Yellow Perch Perca flavescens, which is a small aquaculture species by volume but having high regional recognition and demand in the Midwestern U.S. (Malison 2003). The market demand for Yellow Perch cannot be sustained by wild capture fisheries (i.e. Great Lakes) or current aquaculture production (Malison 2003). The commercial harvest of Yellow Perch has diminished since the 1960’s and early 70’s (Figure 1-1), primarily due to the introduction of aquatic nuisance species (e.g., zebra mussels), overharvest, and variable recruitment in the Great Lakes (Knight et al. 1984). In the 1990s, abundance of Walleye Sander vitreus and Yellow Perch was discovered to be significantly lower than the previous decade in the Michigan waters of Lake Erie (Thomas and Haas 2000). Additionally, since the outbreak of Viral Hemorrhagic Septicemia (VHS) in the Great Lakes, fish populations have suffered and regulation of interstate trade has become much more stringent (Bowser 2009). This has further spurred an interest in developing Yellow Perch aquaculture outside of states with VHS. In 2005, there were a total of 99 small commercial producers raising Yellow Perch, with a value of about $692,000 USD (USDA-NASS 2006). Yellow Perch are a high-value fish with flaky-white, low-oil flesh often exceeding $12 per pound (retail) in the north-central region of the U.S. (Burden 2013). Yellow Perch have also been found to be significantly better tasting than Walleye, with no difference detected between farmed or wild-caught fish (Delwiche et al. 2006). Yellow Perch have long been a popular food fish, but Midwestern retailers, restaurateurs, and consumers often do not have the opportunity or availability to select Yellow Perch over 26 imported seafood (Malison 2003). Increasing demand for Yellow Perch has far outgrown its current commercial fishing and aquaculture production capability, and so abundant opportunity exists in the development of aquaculture production (Malison 2003). Hence, there is great interest in improving culture methods for Yellow Perch from both production and marketing perspectives (Burden 2013). Many commercial Yellow Perch producers use extensive pond culture that suffer from with high production variability due to natural food abundance and extant pond conditions (Malison 2003). The use of supplemental aquafeeds can be used in extensive pond rearing, but only a portion of the fish’s nutritional requirements would be supplied by the introduced feed. Supplemental feeding in extensive aquaculture will not be discussed here. Genetic research on improved aquaculture performance of Yellow Perch is an area of recent interest (Han-Ping et al. 2009) and investigators have made significant advances in characterizing specific microsatellite loci for broodstock management (Li et al. 2007). Furthermore, there are also distinct advantages to producing monosex female Yellow Perch populations for food production (Malison and Garcia‐Abiado 1996). This study will utilize wild, local Midwestern strains of mixed sex; however, continued research is needed to further advance genetic pairing with plant-based feeds for increased intensive production. Recirculating Aquaculture System (RAS) Growth of finfish aquaculture in the upper Midwest is reliant on increasing efficiency not only in nutrition but in culture environments. Several problems have arisen 27 from high waste effluent and environmental contamination from aquaculture operations (Boyd 2003). Commercial aquaculture commonly utilizes net pens and extensive pond culture, which lead to aquatic pollution and natural habitat degradation (FAO 2012a). It is well known that these environmental issues must be resolved for the industry to grow, particularly for intensive culture operations in climate-restricted locations. Advances in closed recirculating system (RAS) technology have proven successful in producing economically sustainable amounts of fish with a reduced environmental footprint (Bergheim et al. 2009), but RASs are frequently not economically viable, so continued improvements are imperative (Badiola et al. 2012) to enable broader species applications. Implementing RAS technology requires more costly initial capital investments than extensive systems, with up to eight year payback (Badiola et al. 2012). Most companies who have grown Yellow Perch in RASs have closed for similar reasons (Malison 2003). However, recent engineering improvements have allowed these systems to produce high densities of fish and reach almost 100% efficiency in operating water usage (Timmons and Ebeling 2007). Advantages of RASs also include increased biosecurity, smaller footprint, sustainability, infinitely expandable, reduced effluent pollution, and ability to stringently monitor and control water quality to maximize production and minimize risk (Timmons and Ebeling 2007). Because of the operational complexity of these systems, technicians must be highly trained (Badiola et al. 2012). A thorough understanding of water chemistry, fish behavior and aquaculture engineering is needed to operate intensive systems. The high level of water quality control, fish health maintenance, space utilization, and solids removal efficiency of a RAS is growing in acceptance with rising 28 costs of land, water, and energy (Malison 2003). Even though intensive aquaculture requires high startup cost and requires more frequent monitoring than extensive aquaculture, intensification can also lead to more consistent, year-round production (Badiola et al. 2012). Water quality Selecting a suitable water source and maintaining optimal water quality is critical for healthy fish and a productive aquaculture operation (Piper 1986). There are several guidelines published for water quality characteristics, and many (e.g., temperature) are species specific for optimal production (Timmons and Ebeling 2007). Diligent water quality monitoring is especially important in RAS (Summerfelt 2003; Timmons and Summerfelt 2007). The first step in maintaining RAS water quality is efficient solids removal. Uneaten feed and fecal solids remaining in an intensive system contributes to many water quality problems as well as directly affecting fish by interfering with oxygen transport across gills, decreasing oxygen concentrations during decomposition, and harboring pathogens (Cripps and Bergheim 2000; Timmons and Ebeling 2007). As a general rule, for every kilogram of feed fed, fish can generate 0.3 to 0.4 kg total suspended solids (TSS), or about 25% of feed fed (db) (Timmons and Ebeling 2007). The maximum recommended level of TSS for freshwater fish is 10 mg TSS/L (Timmons and Ebeling 2007). Primary elimination of settleable and large suspended solids include bead filtration, sand filtration, and screening systems (Terjesen et al. 2013). Although settleable and some suspended solids can be removed through gravity clarification or 29 sedimentation processes, depending on their particle size and specific gravity, dissolved solids are more difficult to remove (Timmons and Ebeling 2007; Terjesen et al. 2013). Technologies such as ozonation, foam fractionation, and hydrocyclones can be used to reduce dissolved solids (Summerfelt 2003; Timmons and Ebeling 2007; Terjesen et al. 2013). Ozonation (O3) works well in high-density intensive RASs to oxidize larger materials as well as destroy organic molecules that cause water color issues (Summerfelt 2003). Dissolved oxygen (DO) is the most important water quality parameter (Timmons and Ebeling 2007). A DO concentration below about 2.0 mg/L was found to significantly reduce growth rates of Yellow Perch, while DO above 3.5 mg/L did not affect growth (Carlson et al. 1980). DO concentrations below about 0.84 mg/L is lethal to Yellow Perch (Petit 1973). DO can be added by diffused air, pure oxygen injection, low head oxygenators (LHO™), packed columns, U-tubes, spray towers, or ozonation with subsequent ozone destruction via UV filter (Summerfelt et al. 2000). Air diffusers are not recommended for high density systems, as the efficiency of oxygenation is very low (Colt and Watten 1988). Daily monitoring of DO is especially important in intensive systems containing high fish densities, where major fish kills can occur within minutes of an oxygen system failure. One large drawback to maintaining DO is that the saturation point of water decreases with increasing temperature. Increasing temperature also causes increased metabolism, respiration rate, and thus an increased need for oxygen. Water also contains much less oxygen than the ambient air (21% oxygen), and so fish are forced to devote more energy towards respiration. DO saturation at the optimum temperature for Yellow Perch is around 8.7 mg/L. Some species are more tolerant of low DO conditions. 30 Similar to Yellow Perch, Salmonids require a higher DO (6-8 mg/L) than catfishes (Ictaluridae) or tilapia (Oreochromis spp.) (2-6 mg/L) (Timmons and Ebeling 2007). Temperature is the second most important water quality parameter and can directly affect several aspects of fish physiology (Tidwell et al. 1999) as well as influence toxicity of other water quality parameters (Timmons and Ebeling 2007). Fish species are generally grouped by thermal tolerance into three categories: Cold-water (~15°C), coolwater (15-20°C), and warm-water species (>20°C) (Timmons and Ebeling 2007). Because fish are poikilotherms, their physiological processes are greatly affected by ambient temperature (Stickney 1979). Therefore, the species optimum temperature for efficient growth should be maintained in the intensive production system. Although Yellow Perch are considered a cool-water fish, the optimum temperature for Yellow Perch growth ranges from about 23 to 25.4°C (Fischer and Hall Jr. 1989; Tidwell et al. 1999; Brown and Smith 2004). Un-ionized ammonia (NH3) is highly toxic to fishes and should be monitored on a regular basis (Piper 1986). Even at low concentrations (LC50 0.08—2.2 mg/L) un-ionized ammonia can be toxic, and should be maintained below 0.0125 mg/L for salmonids and below 0.05 mg/L for other species (Timmons and Ebeling 2007). Unlike terrestrial animals, aquatic animals excrete ammonia as the primary waste product of protein catabolism (Wright 1995). It can also result from decomposition of uneaten feed (Piper 1986). The portion of total ammonia nitrogen (TAN) which is un-ionized increases with increasing temperature and pH (Thurston et al. 1981). A healthy biofilter containing chemoautotrophic nitrifying bacterial colonies (e.g., Nitrosomonas, Nitrobacter) is essential for reducing ammonia into a non-toxic form of 31 nitrogen. Starting a biofilter is sometimes difficult because different species of nitrifying bacteria will colonize and proliferate at different times and rates; if not properly stabilized before stocking fish, ammonia or nitrite levels may become a concern. There are two main steps involved in the oxidation of ammonia. The first step involves oxidation of ammonia to nitrite by ammonium oxidizing bacteria (AOB), which is typically represented by Nitrosomonas species. The nitrite (NO2-) produced by AOB during this step is also very toxic to fish and must be monitored on a regular basis. The AOB are the first species to proliferate in the biofilter with high levels of ammonia and nitrite spikes occur several days later. The second step involves nitrite oxidizing bacteria (NOB), which are represented usually by species of the Nitrobacter genus. This step produces the relatively non-toxic nitrate (NO3-) which spikes shortly following nitrite reduction (Timmons and Ebeling 2007). One of the benefits of ozone treatment is the ability to oxidize the toxic nitrite to the non-toxic nitrate (Summerfelt 2003). The pH is also important in that extreme levels can be stressful or lethal, but pH also has an effect on toxicity of other water quality characteristics such as ammonia (Timmons and Ebeling 2007). Yellow Perch have been considered to be relatively tolerant of acidic conditions compared to other species like juvenile Rock Bass Ambloplites rupestris, Black Crappie Pomoxis nigromaculatus, and Largemouth Bass Micropterus salmoides (McCormick et al. 1989). Juvenile Yellow Perch have been found to endure soft water of pH 5.0, but at pH 4.0 the perch do not survive (McCormick et al. 1989). Various life stages of Yellow Perch have been found to respond differently to pH (Fischer and Hall Jr. 1989). Additionally, pH has been found to affect the taste preferences in fish (Kasumyan and Doving 2003). 32 Alkalinity and hardness also share important interactions with pH. Alkalinity is a quantitative measure of the waters ability to neutralize an acid. Carbonates and bicarbonates can be added to water in several forms (Timmons and Ebeling 2007) to increase alkalinity. Alkalinity is closely related to hardness (mineral content), which at low levels can result in acute toxicity of copper (Taylor et al. 2003). Yellow Perch have been found to be more tolerant of copper binding to gills than Rainbow Trout (Taylor et al. 2003). Carbon dioxide (CO2) can also be a problem in RAS culture, and is directly associated with pH and the carbonate system (e.g., carbonic acid, bicarbonate ions, carbonate ions) (Timmons and Ebeling 2007). Yellow Perch have been found to be more sensitive to CO2 than Brown Bullhead Ameiurus nebulosus, but similar in sensitivity to Brook Trout Salvelinus frontinalis and White Sucker Catostomus commersonnii (Black et al. 1954). Carbon dioxide is created through respiration as well as solids decomposition and should be maintained at low levels (<20 mg/L) (Timmons and Ebeling 2007). High levels of CO2 can cause physiological problems including respiratory acidosis, but there has been some research in using high levels of CO2 as an anesthetic (Timmons and Ebeling 2007). CO2 removal in RASs includes both gas transfer and chemical processes in addition to simply increasing water replacement rates (Summerfelt et al. 2007). Tank aeration and degassing towers can off-gas to the atmosphere, while pH control will equilibrate the carbonate acid-base system to help reduce CO2 concentrations (Summerfelt et al. 2007). Other water quality parameters such as salinity, chlorine, phosphorus, and conductivity can present problems at certain levels. Water quality measurements also 33 depend on the specific situation (e.g., testing for chlorine while using a dechlorinated municipal water supply). However, the above water quality parameters are important to control in every type of system and they will often be the first to deteriorate when there is a problem. Often when a water quality problem is detected, fish are already stressed or dying. It is for this reason why frequent water quality measurements and monitoring systems are of utmost importance to high density RAS aquaculture. Feed Formulation and Nutritional Requirements Commercial fish feeds are often least-cost formulated based on availability and pricing constraints of certain ingredients and not necessarily optimal performance. The feeds not only require complete nutrition and palatability but also functionality due to water immersion. Ingredients may be included in diets to act as binders for pellet stability and durability purposes, while others may be included for enhanced immunity and improved organoleptic properties (Glencross et al. 2007). Feeds which rely on not only FM and oil, but any single ingredient pose a higher risk associated with fluctuating prices, quality, or availability. Feed costs can represent 40-60% of operational costs of aquaculture production (Brown et al. 1996). It is suggested that a combination of plant-based ingredients would be required to fully replace FM, including supplemental amino acids, palatability enhancers, and pellet property augmentations (Gatlin et al. 2007). Formulation software is available from several commercial providers and also can be produced on spreadsheets by nutritionists. Feed formulation software is often based on linear, least-cost software which may provide an optimal recipe based on user-defined 34 limitations of cost, availability, digestibility, and nutritional requirements. Some software products have the capability of implementing stochastic variation based on changing commodity growing conditions and also seasonal variation in ingredient composition (Pesti and Seila 1999). Using stochastic software is often more accurate at providing a guaranteed nutritional composition (Pesti and Seila 1999). Regardless of software, ingredient quality and variability must be considered in any formulation. The nutritional requirements of fish vary greatly between carnivorous species which need high amounts of protein compared to omnivorous or herbivorous species which grow favorably on feeds made similar to poultry or swine feeds (Storebakken et al. 2000). Formulations in the present research were based on a compilation of information from requirements suggested by Hart et al. (2010), Twibell and Brown (2000), Dr. M. Brown (personal communication), and unknown nutrient requirements were based on Rainbow Trout requirements (NRC 2011). Diet formulations included supplements due to an incomplete nutritional profile of plant ingredients (including soybeans), compared with animal ingredients (NRC 2011). The nutritional components, antinutritional components and known interactions of ingredients must also be characterized and combined with other ingredients to provide all essential proteins, lipids, carbohydrates, vitamins, and minerals. Palatability and attractability are the first determinants of whether a feed ingredient is “good” or “bad,” and are considered some of the most important components of a feed, although there is sometimes no apparent relationship between the two determinants (Kasumyan and Doving 2003). Regardless of the nutritional quality, if fish do not consume a feed because of poor palatability, the nutritional quality cannot 35 support growth and results in wasted feed and unwanted water contamination. There have been several palatability enhancing supplements identified in the literature, however these enhancements are highly species-specific (Kasumyan and Doving 2003; Yackey 1998). Ingredient processing can also impart certain flavors on soy products as well as the final pelleted feeds (Refstie et al. 1998). Proteins and Amino Acids Dietary protein is one of the most important components of a complete feed because it is used for energy, growth and maintenance (Kaushik and Médale 1994). FM has been the traditional protein source in carnivorous aquafeeds because it has outperformed plant products in feed uptake and growth performance. Some commercial feed formulations for carnivorous fish include FM in excess of 50% (Glencross et al. 2007). However, due to the rising price of FM along with fluctuating availability and uncertain quality, producers and feed manufacturers who rely on FM are faced with a considerable risk. Therefore it has been suggested that future FM-based feeds will be used only for expensive starter, finisher and broodstock feeds (Tacon and Metian 2008) Plant-derived protein products can be added as a protein substitute or supplement to FM, only as long as the final amino acid profile meets or exceeds species requirements. In a review of soy proteins in aquafeeds, Storebakken et al. (2000) mentioned several species of carnivorous fish for which 75 to 100% of the FM protein was successfully replaced with SPC. Protein concentrates generally work well to supply the bulk of essential amino acids, but supplementation with lysine and methionine is often necessary to meet all requirements (Storebakken et al. 2000). Multiple plant meals 36 is one way to provide all the essential amino acids (Gatlin et al. 2007). Corn gluten, wheat gluten, wheat midds, and others are commonly used in aquafeeds to provide different and complementary amino acid profiles as well as for improving pellet functionality or taste (Gatlin et al. 2007). There have been mixed results on protein requirements of Yellow Perch, and evidence seems recommend higher levels of protein (at least 36% db) than previously thought (Brown et al. 1996, Ramseyer and Garling 1998). Other preliminary studies indicate Yellow Perch may require up to 45% protein for maximum growth (Dr. M. Brown, Personal Communication). Lipids and Fatty Acids Most plant oils including soybean oil lack adequate amounts of essential long chain n-3 fatty acids Eicosapentaenoic acid (EPA) and Docosahexaenoic acid (DHA) which are found in FM and fish oil. EPA and DHA are known to be important in the nervous, circulatory and immune systems in humans (Simopoulous 2002) and they are also important for Yellow Perch (Mjoun et al. 2012). Soybean oil contains high n-6 fatty acids and cannot fully replace fish oil to maintain health and growth of Yellow Perch (Mjoun et al. 2012). Additionally, replacing fish oil with soybean oil can also change the organoleptic properties of the fish flesh (Storebakken et al. 2000). In feeding trials with Red Drum Sciaenops ocellatus, Tucker et al. (1997) found no difference in growth when low levels of soybean oil were used to replace menhaden fish meal. Growth was restricted when those fish were fed higher levels of soybean oil, which may have been caused by the decrease in EPA and DHA (Tucker et al. 1997). 37 Phospholipids, which are the major constituent of soy lecithin, are vital to cell structure and function in fish (Hertrampf and Piedad-Pascual 2003). However, there is some evidence that smaller, fast growing fish have a higher requirement than larger fish (Poston 1990a; Poston 1990b). Choline, inositol, and phosphorus are all essential nutrients which are present in soy lecithin in the form of phospholipids. Inadequate or absent dietary phosphatidylcholine can lead to accumulation of fat in the liver due to interference with lipid metabolism, fatty acid transport, and fat-soluble vitamin absorption (Hertrampf and Piedad-Pascual 2003). Additionally, soy lecithin has been found to act as an antioxidant as well as an attractant (Hertrampf and Piedad-Pascual 2003). There has been success replacing soy lecithin with artificial choline chloride (Hertrampf and Piedad-Pascual 2003); however, Poston (1990a) found improved growth in Atlantic Salmon when fed soy lecithin over artificial choline chloride. The dietary requirements of these phospholipids depend on the age of the fish, total fat content of the feed, and cold water species require more than warm-water species (Hertrampf and Piedad-Pascual 2003). Carbohydrates It is well known that plant products contain more complex indigestible carbohydrates than FM and are normally not as easily digested by carnivorous fish (Glencross et al. 2007). This variability is attributed to structural and functional differences within the intestine and related organs of herbivorous or omnivorous fish. While sucrose is an oligosaccharide which is readily available to carnivorous fish, the other complex oligosaccharides (i.e. raffinose and stachyose) are not digestible due to 38 the lack of α-galactosidase enzyme production in fish (Gatlin et al. 2007). Before nutrient absorption can occur, a polysaccharide must be broken down to a monosaccharide by various enzymes produced by microbes within the intestine. Sometimes, the limiting enzyme may be available in the intestine, but intestinal conditions (e.g., pH, temperature) are not conducive to carbohydrate digestion. It has also been noted that fish may be able to adapt in different ways to various carbohydrate levels (Krogdahl et al. 2004; Krogdahl et al. 2005). Genetic selection programs may also provide strains more suitable for maximizing production when fed alternative plant-based protein sources (Hardy 1998), which tend to have higher carbohydrate levels. Minerals Mineral requirements of Yellow Perch are essentially unknown, so salmonid requirements are typically substituted. There are, however, several suggested requirements for various cold, cool, and warm-water fish species summarized in NRC (2011). Quantifying mineral requirements of any species is difficult due to the incredible amount of interaction between various minerals. Quantifying requirements of a fish species presents an especially difficult task, due to the fish’s ability to absorb minerals directly from the water, feed leaching, and significant variability in bioavailability (NRC 2011). FM appears to provide a better bioavailable source of minerals than plant-based products (NRC 2011). Therefore, it is well known that supplementing plant-based diets is critical (NRC 2011). Additionally, ingredient processing and the addition of exogenous enzymes such as phytase can increase the bioavailability of minerals (Riche and Brown 39 1996; Storebakken et al. 1998b). Some of the major signs of mineral deficiency in fish include impaired growth, skeletal deformities, anemia, cataracts, and impaired nutrient utilization (NRC 2011). Vitamins Vitamin content and bioavailability varies widely between different dietary ingredients and are influenced by processing methods of both feed ingredients and final feeds (Barrows et al. 2008; NRC 2011). Vitamins can be classified as either water soluble or fat soluble. Water soluble vitamins include the B complex vitamins, ascorbic acid, choline, and inositol (NRC 2011). Fat soluble vitamins include vitamins A, D, E, and K are stored by the body, unlike water soluble vitamins, which require a constant dietary supply (NRC 2011). Very little information exists on vitamin requirements for Yellow Perch, but relatively complete requirements have been determined for Chinook Salmon, Rainbow Trout, and several warm-water species (Barrows et al. 2008; NRC 2011). However, due to the lack of adequate vitamin bioavailability data, formulations are generally overcompensated with additional vitamin mixtures assuming minimal bioavailability from primary ingredients (Gatlin et al. 2007; NRC 2011). Plant products that are vigorously processed such as through extrusion have been found to require a different supplemental vitamin profile compared with previous formulations containing fish and animal ingredient-based diets (Barrows et al. 2008). For example, ascorbic acid (vitamin C) is often inactivated by heat produced in the feed making process, so additional 40 phosphorylated (heat stable) ascorbic acid must be supplemented. Ascorbic acid, choline, and inositol are required in larger quantities than other vitamins (NRC 2011). Barrows et al. (2008) observed that Rainbow Trout fed a plant-based diet with an inadequate vitamin profile, exhibited reduced survival, feed intake, protein digestibility, energy digestibility, hematocrit, and Hepatosomatic Index (HSI). Other signs of vitamin deficiency include decreased lipid utilization, abnormal swimming, emaciation, cataracts, skeletal deformities, and liver abnormalities (NRC 2011). Other Supplements A variety of feed additives, can be included in a diet to enhance the physical or chemical properties of a feed. These include antimicrobial agents, antioxidants, binders, pigmentation, enzymes, organic acids, palatability enhancers, immunostimulants, prebiotics, and probiotics (NRC 2011). Commercial formulations commonly include a variety of feed additives for specific purposes (NRC 2011). Enzymes are now commonly used in complete feeds. The addition of phytase can improve the availability of phosphorus as well as minerals that are normally bound in SBM and other plant products by phytic acid (Gatlin et al. 2007). Maximizing utilization of intact phosphorous by releasing the bound phosphorus from phytic acid reduces phosphorus pollution (Storebakken et al. 1998b). Unfortunately, commercial phytase is heat labile and also less effective at low water temperatures, which creates problems when included in extruded feeds fed to cold-water species (Storebakken et al. 2000). Anti-microbial chemicals are commonly added to feeds as either a therapeutic or to extend shelf-life (NRC 2011). Depending on culture system and logistics, oral delivery 41 of antibiotics is more feasible than immersion treatment in a large system. A variety of compounds can be added to increase product shelf-life, including benzoic acid, propionic acid, sorbic acid, and other salts (NRC 2011). Pigments such as astaxanthin have been supplemented to salmonid diets, to mimic natural coloration of the fillet (NRC 2011). This is because most natural pigments in fish and shrimp flesh is the result of natural dietary items (Barrows et al. 2007). Plant-based diets are particularly lacking of the pigments necessary to create a natural salmon fillet color (NRC 2011). It is also important to consider functionality when selecting ingredients. The functional color, size, moisture, shape or texture of pellets may also have an effect on ingestion. Both nutritional functionality and physical strength of the pellets are important, so several functional agents can be added. For example, wheat gluten’s viscoelasticity properties are related to the quality of bread (Shewry et al. 2002). It is also important to predict ingredient functionality prior to processing, especially when using cooking extrusion, which can impart changes in chemical structure (Barrows et al. 2007). Pelleting Extrusion cooking technology provides feed manufacturers the capability to produce floating, slow sinking, or sinking feeds which are more stable in water than other types of feed production. Major aquafeed manufacturers often use extrusion for larger pellets (>1 mm) and spheronizers (marumerizers) or sieved crumbles for smaller pellet sizes. However, extrusion of smaller sizes (~200 µm) is also possible. Steam-pelleting and screw-pressing pellets can also be used to create aquafeeds, but are typically less 42 durable and water stable than extruded pellets. Extruding the final formulation into a complete pellet improves characteristics such as pellet stability and durability, due to carbohydrate gelatinization (Fallahi et al. 2014). Pelleting temperature is critical in both extruded and non-extruded aquafeed production. Extrusion usually offers a much higher degree of temperature control than screw-pressing due to steam injection, jacketed barrel segments, and temperature monitoring. Heating feeds via extrusion has also been shown to reduce trypsin inhibitors (Romarheim et al. 2006) and increase the digestibility of plant-based feeds in several fish species (Burel et al. 2000a; Stone et al. 2003; Stone et al. 2005). However, adverse processing conditions from excessive heat are known to cause decreased quality in feed constituents (Öste and Sjödin 1984). The amount and type of protein, carbohydrate, lipid and moisture all have an effect on reactions experienced in cooking extrusion (Öste and Sjödin 1984). Hence, caution must be used in extrusion processing because overheating can cause a Maillard reaction wherein amino acids react with sugars and interfere with amino acid digestion of the feed (Öste and Sjödin 1984). Additionally, overheating soybean products will result in reduced lysine bioavailability (Swick 2007). Because under-heating will produce less stable pellets, an optimum, stable extrusion temperature is necessary. Feeding Feeding a prepared feed is generally easier and more consistent than feeding live feeds. However, feeds and feeding methods change from one life stage to the next. Feed 43 can be distributed by hand, belt, vibratory, pneumatic, or demand systems. Both feeding level and feeding frequency can be optimized for a particular species, life stage, and feed. Feeding frequency of Yellow Perch can be several times per day, and is typically more frequent during early life stages (≥5 feedings per day), and can reduce to 1-4 feedings per day at later life-stages. There is some interest in inducing compensatory growth (CG) of Yellow Perch (Schaeffer et al. 2012) as well as other species (Bavcevic et al. 2010), to improve feed conversion ratios by manipulating feed-fast cycles. CG is a natural compensatory response experienced by wild fish under harsh conditions or food shortages (Jobling 1994). CG is a potential opportunity to increase the economic viability of aquaculture production, however, more research is needed on this topic. Feed acclimation is important when feed training larvae transitioning from endogenous to exogenous feeding, switching juveniles from a live diet to a prepared diet, and acclimating fish from an FM-based diet to a plant-based diet. Switching from FMbased diets to SPC-based diets often leads to temporary decreased feed consumption and growth in salmon (Storebakken et al. 1998b). Yellow Perch often show a similar reaction when using soy-based feeds with inadequate palatability (Malison 2003). Providing mixtures of feeds during feed transitioning is often used in commercial aquaculture to minimize negative reactions. Accurate feed intake is also critical for the assessment of palatability by discriminating the effects of voluntary feeding and nutrient utilization (Glencross et al. 2007). Feed intake estimates can be measured in several ways including specialized collection structures, collecting and measuring, or pellet counting (Helland et al. 1996). 44 Feeding levels used in this research were based primarily on consumption estimates of juvenile Yellow Perch through the pellet counting method. Summary The success of soy ingredients in human food and animal feed is attributed to processing technologies. While a single processing method will not be adequate for a complete aquafeed, soy processing methods optimized to meet the requirements of carnivorous fish will definitely help in overcoming the issues associated with alternative proteins for aquafeeds. There are still considerable research needs to characterize species-specific fish responses to dietary soy ANFs and improvements in processing. Bioprocessing is one of the fastest growing and most promising methods of creating lower-cost processing technologies that can create more cost-efficient soy products for use in carnivorous fish diets. Little is known about the nutritional requirements of Yellow Perch and there are very few domestic producers in comparison to more commonly culture species of Rainbow Trout, Atlantic Salmon, Channel Catfish, Hybrid Striped Bass, and Tilapia. Greater knowledge of Yellow Perch dietary needs and culture methods must be developed to facilitate production. Ultimately, cost-effective, commercial feeds designed for Yellow Perch life stages that provide high conversion, good growth, and minimal solids would be ideal for RAS production. Fish fed nutritionally complete diets exhibit higher growth rates and produce less waste than fish fed natural forage or nutritionally incomplete artificial diets (NRC 2011). Meeting the energetic needs of a Yellow Perch, 45 while providing optimal protein for somatic growth enhances protein efficiency and reduces diet cost. In addition to the nutritional aspects of Yellow Perch culture, research on genetics, optimum water quality requirements, disease prevention, and intensive RAS technology are also critical for efficient and economical production. 46 Table 1-1. Trypsin inhibitor activity (TIA) of soybeans and soy products. Material Defatted white flake TIA (mg/g wb) 28-32 Source Rackis et al. 1985 Soybean Meal 2-15.0 Rackis et al. 1985; Synder and Kwon 1987; Gao et al. 2013 Soy Protein Concentrate 5.4-7.3 Peace et al. 1992 Soy Protein Isolate Bioprocessed SBM 1.2-30 1.6-6.4 (db) Rackis et al. 1985; Peace et al. 1992; Gao et al. 2013 47 Table 1-2. Proximate composition of commercially processed soy products (g/100g dm except where noted). Moisture Material Protein (% wb) Full-fat soy 42 ≤10 flour Fat Fiber Ash NFE 20-21 5.6 4.7 27-28 Source Lusas and Riaz (1995); Forster (2002) Defatted White flake 56-59 6-8 0.5-1.1 2.7-3.8 5.4-6.5 32-34 Lusas and Riaz (1995) Soybean Meal 50-59 6-11 0.5-1.4 2.7-6.9 5.4-6.9 32-34 Lusas and Riaz (1995); Forster (2002); NRC (2011) Soy Protein Concentrate 65-84 4-8 0.5-1.0 0.1-5.0 3.8-6.5 20-22 Lusas and Riaz (1995); Forster (2002); NRC (2011) Soy Protein Isolate 90-92 4-6 0.5-1.0 0.1-0.2 4.0-5.0 3-4 Lusas and Riaz (1995) 48 Table 1-3. Various Microbes, process (solid state fermentation-SSF; liquid state fermentation-SLF), and feedstock used in fermentation of soy products. Microbe Aspergillus ficcum Process SSF Feedstock SBM Aspergillus oryzae SSF SBM 50% MC Aspergillus usami Aspergillus oryzae+ 40-60% MC Lactobacillus casei Bacillus subtilis ~50% MC Aspergillus+Bacillus spp. Bacillus spp. compound Bifidobacterium lactis Lactobacillus brevis Lactobacillus brevis Lactobacillus plantarum Rhizopus oligosporus Saccharomyces cereviseae Proprietary SSF SLF SSF SSF SLF SSF SLF SBM Source Han and Wilfred 1988 Hong 2004; Gao et al. 2013 Matsui et al. 1996 SBM Chen et al. 2010 Texturized soy protein PepSoyGen SBM SBM SBM WF SBM SBM SBM Kim et al. 2010 Barnes et al. 2014 Yamamoto et al. 2010 Song et al. 2008 Gao et al. 2013 Refstie et al. 2005 Song et al. 2008 Buckle 1985 Song et al. 2008 Jul‐04 Dec‐04 May‐05 Oct‐05 Mar‐06 Aug‐06 Jan‐07 Jun‐07 Nov‐07 Apr‐08 Sep‐08 Feb‐09 Jul‐09 Dec‐09 May‐10 Oct‐10 Mar‐11 Aug‐11 Jan‐12 Jun‐12 Nov‐12 Apr‐13 Sep‐13 Feb‐14 Average Price (US Dollars per Metric Ton) 49 2500 Fish meal Bank 2014). Soybean Meal 2000 1500 1000 500 0 Date Figure 1-1. Average commodity price of FM and SBM over the previous 10 years (World 50 Aquaculture 200 180 160 140 120 100 80 60 40 20 0 1950 1953 1956 1959 1962 1965 1968 1971 1974 1977 1980 1983 1986 1989 1992 1995 1998 2001 2004 2007 2010 Total Production (Million Metric Tons) Capture Fisheries Year Figure 1-2. Total global fish production by primary production source (FAO 2012b). Total Value of Atlantic Salmon imports (1 million U.S. dollars) 51 2500 2000 1500 1000 500 0 Figure 1-3. Total value of Atlantic Salmon imports to the U.S. for the previous 26 years (USDA 2014). 52 SBM 7000 190000 6500 170000 6000 150000 5500 130000 5000 110000 4500 90000 4000 70000 3500 50000 3000 1994 1995 1996 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014 210000 Total FM Production (1000 metric tons) Total SBM Production (1000 metric tons) FM Year Figure 1-4. Total world production of FM and SBM over the previous 10 years (USDA 2014). 53 Figure 1-5. General soybean protein and oil processing flow diagram (modified from Swick 1994; Brown and Hart 2010). 54 1000 Capture Fisheries (USA) 900 14000 Capture Fisheries (Canada) 12000 700 Aquaculture 10000 800 600 8000 500 6000 400 300 4000 200 2000 100 2010 2006 2002 1998 1994 1990 1986 1982 1978 1974 1970 1966 1962 1958 1954 0 1950 0 Year Figure 1-6. Total production of Yellow Perch by method and source. (FAO 2012b). Aquaculture Production (Metric Tons) Capture Fisheries Production (Metric Tons) 16000 55 CHAPTER 2. BIOPROCESSED SOY DIGESTIBILITY IN JUVENILE YELLOW PERCH Introduction Considerable research has been recently done to determine sustainable, plantbased alternatives that can support growth equivalent to marine-derived protein (i.e., fish meal; FM) (Gatlin et al. 2007; NRC 2011). Plant-based aquafeeds have been successful in omnivorous and herbivorous fishes (Gatlin 2002), but carnivorous fishes do not readily accept or digest plant-based feeds (Gatlin et al. 2007). Soybean Glycine max products have been of particular interest as an FM replacer due to the dense nutritional content; however, indigestible, deficient, and antinutritional (ANF) components limit the bioavailability of nutrients in soy and other plant products (Tacon and Jackson 1985; Francis et al. 2001; Sinha et al. 2011). Bioprocessing (BP) technology has been shown to enhance the nutritional quality of soybean meal (SBM) (Hong et al. 2004). Although fermentation of soy products is a common processing method for human food production and some animal feedstuffs, alternative BP methods have been developed with the goal of improving the palatability and bioavailability of soy nutrients in carnivorous fish feeds. Researchers have related improved composition and fish performance to BP (Rombenso et al. 2013; Trushenski et al. 2014). BP-soy contains higher protein, reduced antinutritional factors (ANF) (Han and Wilfred 1988; Chen et al. 2013; Gao et al. 2013), shorter peptides (Hong et al. 2004), and in some cases, improved digestibility (Skrede et al. 2002). Digestibility is the measurement of nutrient absorption from a feed or a feed ingredient and can be expressed as true or apparent digestibility. Nutrient digestibility 56 information can be very useful in the comparative evaluation of feedstuff processing technologies, however it is also difficult to measure (Austreng 1978b). Applied fish nutrition research is generally focused on apparent digestibility due to the limitations of collecting feces and quantifying nitrogenous waste excreted from gills. Usually, digestibility measurements are reported as apparent digestibility coefficients (ADC) (e.g., protein [ADC-P] or energy [ADC-E]), but the estimates can be considered biased due to many factors interfering with digestion (Alarcón et al. 1997; Glencross et al. 2007). Nutrient utilization interference is complex and difficult to analyze, even when changing one ingredient (Alarcón et al. 1997; Glencross et al. 2007). Nutrient absorption rates are constantly changing, especially within a variable feeding strategy or with temperature (Kitchell et al. 1977; Post 1990). ANFs, amount ingested (due to appetite or palatability), and amount of stomach distention can all have an effect on the digestive enzymes produced, digesta mobility, and nutrient absorption (Garber 1983; Alarcón et al. 1997; Glencross et al. 2007). Given the need to develop improved soy products as FM replacers and understand fish responses to soy ingredients, the aim of this set of experiments was to evaluate the effect of soy processing on protein and energy digestibility in Yellow Perch Perca flavescens. This study was done to provide data for several forms of BP-soy to assist optimization of nutrient upgrading approaches. 57 Methods and Materials Experimental Design and Diet Formulation A completely randomized design was applied to soybean white flake (WF) and soybean meal (SBM) of two genetic types (GMO or non-GMO) bioprocessed with and without extrusion pretreatment. BP and extrusion parameters were held constant between products. Soy products were extruded with a Plasti-Corder PL2000 single-screw laboratory extruder (C.W. Brabender, South Hackensack, NJ) using conditions optimized for oligosaccharide hydrolysis (Karunanithy et al. 2012; Karuppuchamy 2011). Experimental BP-soy was obtained from Prairie AquaTech (Brookings, SD). In addition, commercially available enzymatically treated soy (Hamlet HP 300), fermented soy (PepSoyGen), FM, wheat flour, and wheat gluten were also tested. Each treatment was delivered to tanks containing 100 to 125 juvenile Yellow Perch of about 30-70 g each. Reference feed blends were slightly modified from a formulation used for Rainbow Trout Oncorynchus mykiss and Hybrid Striped Bass Morone chrysops× M. saxatilis ADC measurements (Barrows et al. 2012). Test diets were blended using 70% of the bulk reference diet (db) and 30% of the test ingredient (db); a chromic oxide tracer (0.5%, db) was kept constant in diets. Large particle ingredients were ground through a 1.27 mm screen using a Fitzpatrick comminutor (Elmhurst, IL) prior to dry blending. Dry ingredients were then blended in a Hobart HL200 mixer (Troy, OH) where oil and water are added and blended until homogenous for approximately 5 min. Dough was then screw-pressed using a Hobart 4146 grinder equipped with variable speed feed screw and cutting head with a 3.5-mm die plate. Extrudates were then dried for ~12 min in a Despatch UDAF electric 58 conveyor drier (Minneapolis, MN) with maximum temperature set at 120°C. Feeds were then cooled with forced air prior to packaging, and stored at -20°C pending use. All calculations of digestibility were based on the dry matter composition of nutrients in both feeds and feces. Apparent digestibility coefficients were calculated using the formulas described by Kleiber (1961) and Forster (1999): 100 100 % % ∗ ∗% ∗% ∗ where a = nutrient contribution of the reference diet to the test diet = (level of nutrient in reference diet) * (100-i); b = nutrient contribution of test ingredient to nutrient content of test diet = (level of nutrient in test ingredient) * i; i = level of test ingredient in combined diet (%); and (a + b) = level of nutrient in combined diet (%). Statistical analysis was not used to compare ADC values due to a lack of sample replications. Culture System The 5,678 L recirculating aquaculture system (RAS) consisted of six, 719 L circular tanks, radial flow settler, fluidized biofilter, bead filter, UV filter, heat pump, and a secondary sump equipped with water level control and electronic water quality monitoring probes. Temperature was maintained at 20-23°C, and flow rates were maintained at 1.5 tank water turnovers per hour (18.0 Lpm). Tanks and bioreactors were oxygenated with forced air diffusers. Replacement water was sourced from a municipal water supply and dechlorinated using activated carbon filters and stored in an indoor 15,200 L head tank. 59 Feeding Prior to feeding treatment diets, Yellow Perch fingerlings were fed a complete FM reference diet and were fed to apparent satiation twice daily. Satiation was determined by hand-feeding each tank of fish while monitoring feeding activity. When feeding activity slowed and a significant amount of pellets were visible on the tank bottom, apparent satiation was assumed. The same feeding strategy was maintained after treatment diet feeding began; diets were then fed for at least 10 days prior to stripping fecal material. Sample Collection Fecal samples were collected by distal gastrointestinal stripping (Austreng 1978a; Gaylord et al. 2008). Prior to collecting, anesthetic (80 ppm buffered tricaine methanesulfonate, MS 222) and recovery baths (6 ppt NaCL, 250 ppm KCL, 163 KPO4, 118 ppm MgSO4) were prepared using water from the RAS. Approximately 20 fish were sampled in batches to minimize handling and exposure time in the anesthetic bath. After equilibrium was lost, fish were individually removed and prepared by holding upside down and gently towel drying the ventral area. A consistent amount of external abdominal pressure was applied in a peristaltic motion to only the distal portion of the intestine as described by Austreng (1978b). In an effort to reduce dilution of sample from water splashing or dripping into the sample, fecal matter was expressed onto a latex gloved finger, then immediately transferred with tweezers to a pre-weighed aluminum tin. Fecal samples were pooled by tank. Fish batches were placed in an aerated recovery 60 baths for approximately 10 minutes prior to returning to their original RAS tank. Sample moisture loss was mitigated by covering the aluminum tin between subsets. After all fish from a tank were sampled, sample tins were immediately weighed and frozen at -20°C, and then freeze-dried for analysis. Freeze-dried feces were then weighed to the nearest 0.1 mg to determine moisture loss from freeze drying. Compositional Analysis Ingredients, diets, and freeze-dried fecal samples were ground to a fine powder using a mortar and pestle prior to analysis. Dry matter was analyzed according to NFTA method I (Undersander et al. 1993). Analysis of crude protein (%N x 6.25, AOAC 2006, method 990.03), amino acids (AOAC 2006, method 982.30 E [a,b,c]) and chromic oxide (acid digestion and spectrophotometry) were completed by a certified laboratory. Gross energy was analyzed with a Parr model 6200 Isoperibol calorimeter (Parr Instrument Company, Moline, Illinois) equipped with a semi-micro bomb to accommodate small samples (~0.25 g). Results Nutrient analysis of primary protein sources revealed notable differences in proximate (Table 2-1) and amino acid composition. Average crude protein of experimental BP-soy products (61.8 g/100g dm) was 4.7% higher than unconverted nonGMO SBM (57.1 g/100g dm). Crude fiber was also reduced from 6.2 g/100g dm in BPsoy products to 3.4 g/100g dm in unconverted SBM. Non-fiber extract (NFE) was lower in extruded BP-soy (23.5 g/100g dm) than all other soy products including unextruded 61 BP-soy (27 g/100g dm). Extruded BP-soy products also contained higher ash (9.7 g/100g dm) than all other soy products. Hamlet HP-300 contained a similar protein level (59.3 g/100g dm) to the experimental BP-soy products (61.2 g/100g dm), while crude protein in PepSoyGen (54.9 g/100g dm) was lower. Feed formulations were identical and resulting estimated compositions were similar among soy diets (Table 2-2). Dietary crude protein was considerably higher in test diets containing Empyreal (54.2 g/100g dm) and wheat gluten (52.7 g/100g dm), but considerably lower for wheat flour (34.2 g/100g dm). Crude protein in the FM diet (49.6 g/100g dm) was comparable to the experimental soy diets (range 45.9 to 49.2 g/100g dm). Apparent protein and energy digestibility for the feedstuffs are given in Table 2-3. The highest apparent digestibility of protein (95.3) of any ingredient measured was observed for Hamlet HP 300, followed by bioprocessed, unextruded SBM (GMO SBM#2, 94.4). Soy bioprocessing generally provided higher protein digestibility than commercial soybean meal. Protein in commercial bioprocessed products was generally more digestible than experimental bioprocessed products. However, the commercial products provided lower energy digestibility than any other ingredients. Hamlet HP-300 delivered the lowest energy digestibility of soy products (50.7), but wheat flour was the lowest of all ingredients (44.9). The highest energy digestibility was observed for FM (97.4), which was considerably higher than found for all other products (range 44.9 87.0). Two bioprocessed, unextruded GMO SBM products (GMO SBM#2 and #4) produced high ADC-P values (94.4 and 93.5, respectively) and relatively high ADC-E 62 (87.0 and 67.7, respectively). GMO SBM was the best performing feedstock over nonGMO SBM. ADC-P was also high for wheat gluten (94.1). Apparent amino acid digestibility was on average 4.9% higher for unextruded products than extruded products (Table 2-4). ADCs of the essential amino acids lysine, methionine, arginine, leucine, and valine were improved from extrusion of WF, but negatively impacted from extrusion of SBM. ADCs for lysine (89.2), methionine (91.3), cysteine (60.7), and total amino acids (90.8) were highest for unextruded, non-GMO, BPSBM. Digestibility of taurine fluctuated drastically between diets, and showed an average ADC reduction of 22.2% in extruded products. Non-essential amino acids hydroxylysine and hydroxyproline also exhibited a large reduction in extruded products (16.2 and 15.8% lower ADCs, respectively). On average, unextruded BP-soy products performed favorably to extruded products. Extrusion caused a reduction in protein and energy digestibility for both NonGMO SBM and GMO SBM; however, digestibility of GMO WF was improved from extrusion. Over-processing of SBM could be the cause of decreased improvement. Unlike SBM, WF is not toasted and thus benefited to a greater extent from extrusion pretreatment. Discussion ADCs of protein and energy of FM, SBM, Empyreal, wheat gluten, and wheat flour found in this study were similar to values obtained for Rainbow Trout and Hybrid Striped Bass (Barrows et al. 2012). The special select FM and unconverted SBM in this 63 study also performed similar to the high-quality FM and SBM used in another study with Rainbow Trout (Aksnes and Opstvedt 1998). Energy digestibility of soybean meal was higher than wheat flour and corn gluten, but was similar to wheat gluten, and much lower than FM. Allan and Booth (2004) also found soybeans to provide higher energy digestibility than other plant-meals in Silver Perch Bidyanus bidyanus (Mitchell). Although firm relationships could not be discerned here, lipid constituents could greatly affect energy digestibility, and may be the cause for lower energy digestibility in plant meals than in FM. Results indicate extrusion of WF improved digestibility of protein and amino acids, but extrusion of SBM degraded digestibility. Extrusion reduced NFE and consequently non-starch polysaccharides, which are negatively correlated with protein and lipid digestibility (Refstie et al. 1999). The reduction of NFE along with improved digestibility of WF would be in agreement with other research that has found extrusion processing of raw ingredients to improve nutrient digestibility in many species (Barrows and Hardy 2001; Romarheim et al. 2006; Barrows et al. 2007), especially those ingredients with high levels of starch or heat-labile antinutritional factors (Glencross et al. 2011). Other researchers have found extrusion improved digestibility of dry matter, organic matter, and energy in soybean meal by about 3 to 14% (Allan and Booth 2004). Also, extrusion has been shown to reduce soy ANFs such as trypsin inhibitor activity (Barrows et al. 2007) and phytic acid (Allan and Booth 2004), but excessive heat damage is known to make proteins of several plant meals unavailable for fish growth (Glencross et al. 2007). The extruded SBM used in this study may have been exposed to heat damage due to the subsequent thermal treatments (toasting/desolventizing and extrusion cooking). 64 These products showed reduced protein and amino acid digestibility, which supports the probability of excessive heat damage. Since extrusion parameters were not optimized for digestibility of these individual ingredients, ADCs found for Yellow Perch in this study may be conservative values. In addition to ingredient processing, experimental conditions and diet formulation have been suggested to cause variability in results (Bailey and Alanara 2006). These conditions were maintained consistent for test diets in this study. Although relative differences in digestion may be experimentally compared, several factors have been found to affect nutrient absorption rates including sampling method, developmental stage of fish, feeding regime, amount ingested, stomach distention, evacuation rates, and antinutritional factors (Garber 1983; Henken et al. 1985; de la Higuera et al. 1988; Andersen 1998; Francis et al. 2001; Jobling et al. 2007). The feeding strategy of apparent satiation was adopted in this study as a means to reduce variability and increase repeatability in performance results (Petrell and Ang 2001). In addition, a feeding rate of twice per day was used, which was found to be the optimal feeding schedule for Silver Perch (Rowland et al. 2005), and was generally easily implemented with hand-feeding. Feeding to apparent satiation, however, has also been found to decrease digestibility due to larger meal size and subsequently faster gastric evacuation rates (Henken et al. 1985). This may be one source of bias in comparing the results of this study with others (Aksnes and Opstvedt 1998; Barrows et al. 2012). Fecal stripping generally provides a representative fecal sample as long as care is taken to squeeze only the distal third of the intestine with a consistent amount of pressure (Austreng 1978b). The stripping method has been found to underestimate digestibility, 65 most likely because of the incomplete digestion in the hindgut (Austreng 1978b; Vandenberg and De La Noüe 2001). However, other collection methods which involve collecting feces after it is evacuated often causes overestimation due to leaching (Rawles et al. 2010). Stripping limitations include the possibility of including undigested matter, and also contaminating feces with intestinal epithelium and mucus, which can all lead to underestimation of digestibility (Storebakken et al. 1998a). In order to more accurately define ADC values using the stripping method, the amount of nutrient absorption in the hindgut should be studied. Chromic oxide is widely used as a tracer in digestibility studies, and is thought to be predominantly inert. However, the inclusion of chromic oxide at higher levels (≥1.5%) has been shown to affect digestibility and reduce growth and carbohydrate digestibility in tilapia (Shiau and Liang 1995). Considerable research has been done on the influence of chromic oxide, but the effects are relatively minor at low inclusion levels and probably do not change digestibility results (Ng et al. 2004). We assumed our inclusion rate of 0.5% had a negligible effect on digestibility. Summary Very little information exists on feedstuff digestibility in Yellow Perch, a species suited for intensive production growth. Therefore, characterization of plant-based alternative ingredients to FM are critical. Feed formulation on a digestible basis can allow for more economical production, with less waste and faster production. Bioprocessing consistently improved digestibility over unconverted material. Unextruded BP-soy provided a slight advantage in protein digestibility, including FM. 66 However, there was considerable variation in ADC-E values detected between BP conditions. With the growing cost and decreased availability of FM, sustainable plant-based sources are an essential alternative for use in aquaculture feeds. This study has indicated that commercial and novel soy bioprocessing technologies can improve bioavailability of nutrients in Yellow Perch. Further research in optimizing processing technology and carnivorous fish responses will help create more consistent production and better feed ingredients, able to be utilized to a greater extent than conventional plant-based products. 67 Table 2-1. Composition of the primary protein sources (g/100 g, dm unless noted) incorporated into the experimental digestibility diets for Yellow Perch. Constituent Ingredient Fish Meal Special Select Moisture Protein (wb) Lipid Crude fiber Ash Energy (MJ/kg) NFE 67.2 7.6 5.2 0.2 25.3 19.2 2.1 Soybean Meal Non-GMO SBM 57.1 8.3 1.1 6.2 7.2 19.7 28.5 Commercial BP-soy PepSoyGen Hamlet HP-300 54.9 59.3 6.5 9.5 1.2 1.7 2.6 5.1 7.2 7.7 20.1 20.1 34.1 26.2 Unextruded BP-soy GMO WF GMO SBM #1 GMO SBM #2 GMO SBM #3 GMO SBM #4 Non-GMO SBM 55.9 61.5 61.3 61.6 61.1 65.8 4.1 3.5 4.7 6.0 3.8 5.9 0.9 0.8 0.4 0.4 0.5 0.8 3.6 3.9 4.4 2.4 3.4 1.9 11.8 9.5 5.6 5.0 4.2 11.1 19.2 19.7 19.0 19.4 19.5 20.2 27.8 24.3 28.3 30.6 30.8 20.3 Extruded BP-soy GMO WF GMO SBM Non-GMO SBM 62.3 62.7 62.3 3.6 3.1 6.3 0.6 1.0 0.8 2.6 2.0 6.3 9.1 11.0 9.0 19.9 19.6 20.1 25.5 23.4 21.7 Other feed ingredients Empyreal Wheat Flour Wheat Gluten 83.3 15.7 77.5 8.5 10.7 7.1 4.9 1.8 0.0 1.1 2.2 0.2 1.4 2.0 0.7 25.4 18.7 23.4 5.8 78.4 21.7 68 Table 2-2. Digestibility feed formulations and estimated dietary composition of the reference and test diets (g/100g, dm). Ranges are given for soy diets only. Ingredient Fish meala Test Ingredient Whole wheat flourb Vitamin premixc Mineral premixd Stay-Ce Fish Oilf Chromic Oxideg Reference Diet 55.0 0.0 33.2 1.0 1.0 0.3 9.0 0.5 Test Diets 38.5 29.9 23.2 0.7 0.7 0.2 6.3 0.5 Estimated Composition Crude Protein 42.2 45.9-49.2 Crude Fat 12.5 8.8-9.2 Crude Fiber 0.8 1.1-2.4 Ash 16.9 13.1-15.3 NFE 24.1 22.9-27.0 Gross Energy (GE, MJ/kg) 19.2 19.1-19.5 Protein Energy Ratio (g/MJ) 22.0 23.8-25.5 a b Special Select, Omega Protein, Houston, TX; Bob’s Red Mill Natural Foods, Milwaukie, OR; cARS 702 vitamin premix, Nelson and Sons, Murray, UT; dARS 640 trace mineral premix, Nelson and Sons, Murray, UT; eArgent Laboratories, Redmond, WA; fVirginia Prime Gold, Omega Protein, Houston, TX; gFisher Scientific, Pittsburg, PA. 69 Table 2-3. Apparent digestibility coefficients (ADC) of protein (ADC-P) energy (ADC-E) for test ingredients fed to Yellow Perch Ingredient ADC-P ADC-E Fish Meal Special Select 88.8 97.4 Soybean Meal Non-GMO SBM 85.2 57.8 Commercial BP-soy Pep Soy Gen Hamlet HP 300 84.7 95.3 57.9 50.7 Unextruded BP-soy GMO WF Non-GMO SBM GMO SBM #1 GMO SBM #2 GMO SBM #3 GMO SBM #4 78.4 89.6 86.8 94.4 90.4 93.5 54.7 76.6 71.1 87.0 70.9 67.7 Extruded BP-soy GMO WF Non-GMO SBM GMO SBM 79.9 76.5 85.2 67.9 66.5 64.4 83.7 70.2 94.1 57.4 44.9 74.5 Other feed ingredients Empyreal Wheat Flour Wheat Gluten 70 Table 2-4. Apparent digestibility coefficients (ADC) of essential amino acids (EAA) and non-essential amino acids (NEAA) for experimental bioprocessed soy products fed to Yellow Perch. Non-Extruded FM Ref Diet GMO WF Extruded GMO SBM NonGMO SBM GMO GMO WF SBM NonGMO SBM EAA Arginine Histidine Isoleucine Leucine Lysine Methionine Phenylalanine Threonine Valine NEAA Alanine Aspartic Acid Cysteine Glutamic Acid Glycine Hydroxylysine Hydroxyproline Ornithine Taurine Proline Serine Tyrosine 86.4 84.8 88.6 90.1 89.5 86.6 88.2 84.7 87.0 89.7 84.1 84.0 83.9 80.6 80.6 86.9 72.3 83.5 97.9 91.2 90.2 89.5 86.8 86.9 93.9 80.4 90.4 97.3 92.9 92.6 91.6 89.2 91.3 93.1 82.6 94.2 92.4 84.0 84.0 84.6 82.0 83.5 86.1 72.1 84.3 94.5 89.1 89.0 88.6 84.2 87.3 90.6 79.4 89.6 89.5 79.5 81.5 82.7 77.2 81.8 84.4 70.1 80.8 82.5 81.3 56.9 88.4 68.8 45.3 45.4 81.8 69.1 79.1 83.0 88.4 82.0 78.3 44.5 86.4 79.2 25.4 39.9 109.9 7.4 84.5 76.5 85.5 91.1 83.5 46.2 91.7 91.1 64.3 59.1 83.8 35.8 90.7 84.8 92.1 92.1 85.7 60.7 92.8 91.4 45.0 40.9 93.8 25.5 92.0 87.5 91.8 83.5 75.6 45.0 86.3 79.4 18.3 23.3 89.0 -28.2 83.6 80.1 85.2 87.1 79.2 54.8 89.5 82.7 27.5 30.4 95.6 29.6 87.1 84.1 88.6 81.9 68.4 34.5 84.5 75.0 40.2 38.9 82.8 0.8 80.4 77.8 84.0 Total AA 83.6 82.1 89.2 90.8 82.3 86.3 78.9 71 CHAPTER 3. PERFORMANCE OF YELLOW PERCH FED BIOPROCESSED SOY WHITE FLAKE Introduction Expansion of Yellow Perch Perca flavescens intensive aquaculture is highly dependent upon creating more efficient and cost effective feeds. Commercial feeds commonly fed to Yellow Perch contain high levels of fish meal (FM) as the primary protein and essential amino acid source (Kasper et al. 2007); however FM is becoming more expensive due to decreasing availability and increasing market competition (Tacon and Metian 2008). The current world supply of FM is relatively stable and arguably sustainable, but demand will exceed supply if aquaculture and aquafeed continue to grow using FM-based formulations (Gatlin et al. 2007). Therefore, FM must be replaced by alternative feedstuffs for the sustainability of FM stocks as well as for aquaculture and aquafeed industry growth. Additionally, most Yellow Perch feeds are formulated based on the requirements of Rainbow Trout Oncorhyncus mykiss (Brown et al. 1996), which contain higher levels of FM than feeds for herbivorous or omnivorous species (Kasper et al. 2007). Defatted soybean Glycine max meal (SBM) is one of the most commonly used alternatives to FM, due to a well-balanced amino acid profile, moderately high protein content, consistent quality, relatively low cost, and high domestic availability (Sales 2009). Compared to FM, SBM has lower methionine, which is considered to be the first limiting amino acid for fish (Storebakken et al. 2000), while lysine and threonine are also known to be limiting in SBM (Gatlin et al. 2007). SBM and other processed (mechanical, chemical, and/or microbiological) soy products have been used to replace FM in 72 aquaculture feeds for several species with varying degrees of success (Kaushik et al. 1995; Refstie et al. 1997; Brown 2008). Experiments which utilized carnivorous species have revealed limited inclusion levels of dietary SBM (Olli et al. 1994b; Baeverfjord and Krogdahl 1996;). For example, Olli et al. (1994b) found that Atlantic Salmon Salmo salar, L., fed either full-fat or defatted SBM impaired growth performance with increasing inclusion levels, while a solvent-extracted soy protein concentrate (SPC) was comparable to FM up to 56% of the total protein (37.6% of diet). SPC and soy protein isolate (SPI) with reduced antinutritional factors (ANFs such as trypsin inhibitors and phytic acid) and bioavailable protein have been successful, but high processing costs hamper their use as complete FM replacements (Gatlin et al. 2007). Soy bioprocessing (BP) technologies are being optimized to increase protein content, reduce indigestible components (e.g., oligosaccharides), reduce ANF’s, or improve digestibility (Refstie et al. 2005). Cooking extrusion as a BP pretreatment has been found to increase the hydrolysis of oligosaccharides into simpler, fermentable sugars for improved bioprocessing (Karunanithy et al. 2012; Karuppuchamy 2011). Extrusion causes a change in carbohydrate structure and peptide length and is accomplished under extreme pressure, sheer, and high temperature (Barrows and Hardy 2001). Final feeds used in this study were produced via warm extrusion (<50°C), but extrusion cooking is also the primary method of producing commercial aquaculture feeds, and can improve both nutritional and physical qualities of a feed. Most fish nutrition studies do not report physical pellet characteristics, while both nutritional and functional aspects of the final feeds are important. Aquaculture feeds 73 should have good pellet durability, stability, and other physical traits so that feed waste (fines, leaching, spoilage, etc.) is minimized. Plant-based ingredients such as glutens, starches, or other ingredients are commonly added to conventional diets to improve pellet functionality. The primary objective of this study was to evaluate Yellow Perch growth performance, feed efficiency, general health, and gastrointestinal responses to conventional and BP-soy products fed as main protein sources. We also assessed the nutritional composition, ANF’s, and functionality of the primary protein sources. Lastly, we examined the effects of soy processing technologies on physical pellet characteristics. Methods and Materials Experimental Design and Diet Formulation A factorial design with an FM reference was used to test the effects of complete FM replacement with one of three soy protein sources with and without amino acid supplementation. Soy protein sources included one commercial SPC, and two BP-soy white flake (BP-WF) products obtained from Prairie AquaTech (Brookings, SD). One lot of white flake was originally obtained from South Dakota Soybean Processors (Volga, SD), from which half was immediately subject to BP and the remaining half was extruded prior to BP. White flake was extruded with a Plasti-Corder PL2000 single-screw laboratory extruder (C.W. Brabender, South Hackensack, NJ) using conditions optimized for oligosaccharide hydrolysis (Karunanithy et al. 2012; Karuppuchamy 2011). 74 Seven dietary treatments were used with four replications. Diets were coded as follows: FM control (Ref), commercial SPC, SPC with Lys + Met (SPCaa), unextruded BP (BPWF), BPWF with Lys + Met (BPWFaa), extruded BP WF (ExBPWF), and ExBPWF with Lys + Met (ExBPWFaa). Main protein sources were incorporated into diets specifically formulated for Yellow Perch (Table 3-1) based on requirements suggested by Twibell and Brown (2000); Hart et al. (2010); and Dr. M. Brown (personal communication); unknown requirements were based on Rainbow Trout requirements (NRC 2011). Lipid composition of the feeds in this study incorporated flaxseed oil as a partial replacement for fish oil, but effects were not specifically examined. Diets were formulated to balance mass of the primary soy protein sources as well as other ingredients, and also to be similar in composition to the reference diet. Formulations targeted a composition of 42% crude protein, 10% crude lipid, and protein to energy (PE) ratio of 30 MJ/g protein by modifying wheat flour, wheat gluten, celufil, fish oil, and flax oil. Other supplements, except lysine and methionine, were included equally in all diets based on the most limiting diet. Large particle ingredients were ground with a Fitzpatrick comminutor (Elmhurst, IL) with 1.27 mm screen prior to dry blending. Dry ingredients were blended for 20 min using a V-10 mixer containing an intensifier bar (Vanguard Pharmaceutical Machinery, Inc., Spring, TX). Dry blended feedstuffs were then transferred to a Hobart HL200 mixer (Troy, OH) where oils and moisture content (30% wb) were added and blended for ~5 min. Feeds were then screw-pressed using a Hobart 4146 grinder with a 2.5 mm die and dried to ~10% MC under cool, forced-air conditions. Following drying, feeds were milled 75 into pellets using a food processor, sieved to achieve consistent pellet size, and placed in frozen storage at -20o C, pending use for feeding or analysis. Compositional Analysis Chemical analyses of primary protein sources and feeds were completed by certified private laboratories. Analyses were completed for crude protein (%N x 6.25, AOAC 2006, method 990.03), crude fat (AOAC 2006, method 921.39), crude fiber (AOAC 2006, method 978.10), moisture content (MC; AOAC 2006, method 934.01), ash (AOAC, method 942.05) and amino acids (AOAC 2006, method 982.30 E (a, b, c)). ANF’s were also analyzed by certified private labs and included oligosaccharides (Bhatti et al. 1970; Churms et al. 1982), phytic acid (AOAC 2006 method 986.11), and trypsin inhibitor activity (AACC 2006, method 22-40). Culture System The feeding trial was done in a 3,370 L RAS composed of 30, 110 L circular tanks, radial flow settler, bead filter, secondary sump with water level control and electronic water quality monitoring devices, moving bed bioreactor, UV filter, and heating/chilling unit. Individual tanks were also equipped with a solids settling column attached to the drain line for heavy solids removal and tank water level control. Tanks and bioreactor were each supplied with air diffusers fed by a regenerative blower. The RAS was supplied with municipal water, dechlorinated with adsorptive carbon and stored in a 15,200 L head tank. Temperature was maintained at 22°C (range 19-23°C). Flow rate was monitored daily using calibrated manometers installed on each tank supply. 76 Dissolved oxygen, pH, ammonia, nitrite, and alkalinity were also monitored and maintained within acceptable culture levels. Feeding Trial A total of 588 juvenile Yellow Perch were randomly stocked into 28 tanks. The fish were previously held on a commercial trout diet (BioVita Fry; Bio-Oregon, Warrenton, OR). After a two-day period of system acclimation, tanks were randomly assigned a treatment diet, and fish were fed a graded mixture of the commercial diet and the assigned treatment for a week and then fed 100% of the treatment diets. To monitor growth performance, tank biomass was sampled (mean±SE, 4.13±0.64g) after feed acclimation and subsequently every other week until trial end. Individual lengths (mm) and weights (+0.01g) were measured on four randomly sampled fish from each treatment during each sampling period. Tank density was initially 789±79 g/m3 with 21 fish per tank providing a tank biomass of 86.78±2.94g. Sampled individuals were also briefly examined for health issues (e.g., fin erosion, gill color, skin color). Fish were fed to apparent satiation twice daily (0800 and 1600 hr) and feeding rates were modified to slightly overfeed based on feed consumption assessments at least twice per week. Consumption (%) was estimated by counting uneaten pellets 30 min after feeding. This method assumes fish consume feed independent of pellet size (Helland et al. 1996), although the feeds made in this study were sieved and composed of similar size pellets. On a weekly basis, tank consumption averages were used to estimate actual consumption (g). Palatability was inferred from the amount of feed consumed or rejected, especially early in the trial. 77 Upon completion of the trial, five fish per tank were euthanized with 300 ppm buffered MS-222 and examined for ending performance measures including specific growth rate (SGR), relative growth, Fulton condition factor (K), feed consumption, survival, feed conversion ratio (FCR), protein efficiency ratio (PER), fillet weight ratio, fillet composition, hepatosomatic index (HSI), liver color, viscerosomatic index (VSI), apparent protein and energy digestibility, and energy conversion efficiency. Fulton-type condition factor (K) was calculated as: 100,000. Δmass wet, g initialmass wet, g 100% Relative growth (RG) was calculated as: Specific growth rate (SGR) calculated as: ln finalwt g ln startwt g 100 Estimated feed intake values were used in the conversion calculations: Feed conversion ratio (FCR) was calculated as: , , Protein efficiency ratio (PER) was calculated as: growth wet, g massofproteinconsumed dry, g Organosomatic parameters were calculated by the following equations: Hepatosomatic Index (HSI) was calculated as: HSI Viscerosomatic Index (VSI) was calculated as: VSI Visceral Fat Index (VFI) was calculated as: VFI 100, and 100. 100, 78 Intestinal sections were also analyzed for dietary induced inflammation (enteritis) with histological examination. Small sections (~2mm) of proximal and distal intestines were sampled from all euthanized fish. Sections were fixed in 10% buffered formalin for 48 hr and subsequently stored in 70% ethanol until being sent to the South Dakota Animal Disease Research and Diagnostic Laboratory (ADRDL) for sectioning and mounting. Intestine sections were qualitatively scored using the protocol described by Colburn et al. (2012). After the end of the growth trial, the remaining fish in the system were offered the digestibility diets with 1.0% chromic oxide Cr2O3 (Austreng 1978b) for 10 days. Fecal material was collected via gastrointestinal stripping under anesthesia (80 ppm MS-222). Diets and dried feces were then analyzed for gross energy (Parr 6200 bomb calorimeter) and chromic oxide and crude protein (%N x 6.25) analysis. The apparent digestibility coefficient (ADC) for protein (ADC-P) and energy (ADC-E) in the test diets used the following calculation (Kleiber 1961). 100 100 % % % % Physical Pellet Properties Samples of each feeding trial diet were analyzed in triplicate for water activity (aw-), bulk density (BD), pellet durability index (PDI), water solubility index (WSI) and color (Hunter L,a,b-); compressive strength (CS), and diameter (mm) were determined for 10 replications. Water activity of 2 g pellet samples was measured with a Lab Touch aw analyzer (Novasina, Lachen SZ, Switzerland). Three pellet color variables were 79 measured with a spectrophotocolorimeter (LabScan XE, HunterLab, Reston, VA) as Hunter L (brightness/darkness), Hunter a (redness/greenness), and Hunter b (yellowness/blueness); the illumination/observer was D65/10°. BD was estimated by weighing 100mL of pellets and dividing the mass by 0.0001m3 and then converting to kg/m3. PDI was determined according to ASAE standard method S269.4. PDI was calculated as: PDI (%) = (Ma/Mb) x 100, where Ma was the mass (g) after tumbling and Mb was the mass (g) before tumbling. WSI was determined by the static method, and was calculated as loss of weight from leaching/dry weight of initial sample (Obaldo et al. 2002). Pellet diameter was measured using a digital Starrett caliper (Arthol, MA). CS was calculated as peak fracture force of the stress-strain curve from a perpendicular axial direction. Pellets were tested for CS using a TA.XT Plus Texture Analyzer (Scarsdale, NY). Statistical Analysis Performance measures were analyzed for treatment effects with single-factor analysis of variance ANOVA (a priori α = 0.05). Two-way analysis of covariance ANCOVA was used to test the influence of amino acid supplementation in soy diets. Tukey’s HSD test was used for all post-hoc comparisons. Where needed, data were transformed to the confines of a normal distribution and equal variance prior to analysis. 80 Results Soy Ingredient Composition Analysis of primary protein sources indicated substantial differences in proximate composition, amino acids, and ANFs (Table 3-2). Crude protein was highest in SPC followed by FM, BPWF, and extruded BPWF. Crude lipid was highest in FM followed by BPWF, extruded BPWF, and not detected in SPC. Crude fiber was significantly higher in SPC than the other ingredients. Contrary to expectation, fiber was also higher in extruded BPWF than unextruded BPWF. Corresponding to higher protein, SPC also had a greater concentration of essential amino acids (EAA) compared to BP-soy. FM had a greater concentration of methionine, and slightly higher lysine than SPC. All other EAAs were higher in SPC. FM provided more alanine, glycine, hydroxyproline, and taurine than any soy product. Extruded BPWF provided a greater total of amino acids than unextruded BPWF, with a greater concentration of Arginine and a lower concentration of hydroxylysine. Raffinose was not detectible in any soy products. Stachyose was 0.24% (dm) in SPC while bioprocessing completely eliminated stachyose. Phytic acid was reduced from 0.39% in unextruded BPWF to 0.18% (dm) in extruded BPWF, which was similar to levels in SPC (0.23% dm). Trypsin inhibitor activity was substantially reduced from 16,750 TIU/g in unextruded BPWF to 6,538 TIU/g in extruded BPWF. Trypsin inhibitor activity was also high in the commercial SPC (13,630 TIU). Diet analyses revealed similar but not isonitrogenous diets (Table 3-3). Analyses showed that crude protein of unsupplemented diets was highest for FM (44.9%) followed by SPC (43.2%), BPWF (36.8%), and lowest for ExBPWF (37.5%). Differences in other 81 constituents except for ash were negligible between diets. Crude lipid was approximately 10% for all diets. Amino acid analysis of feeds did not reveal deficiencies among any of the trial diets in comparison to estimated Yellow Perch requirements. Digestibility The SPC diet provided the highest ADC-P (91.8) and the FM diet provided the highest ADC-E (81.9) (Table 3-3). Lower consumption or possibly slower gastric evacuation rates may have improved ADC-P of the SPC by increasing contact time with digestive enzymes. BPWF showed similar ADC-P to FM, while ExBPWF produced the lowest ADC-P (84.5) and also lowest ADC-E (63.6). SPC diets also had a moderate protein to digestible energy ratio (PDE). The highest PDEs were observed for FM (29.2) ExBPWF (28.6) and ExBPWFaa (28.6), corresponding with the order of relative growth. Survival, Growth, and Health Performance Survival was significantly different among treatments (P<0.01). Fish fed the FM control had the highest survival (98%) but was not significantly different from ExBPWF (95%), ExBPWFaa (92%), or BPWFaa (85%). All other diets provided lower survival but were not significantly different. Initial tank weights were not significantly different (P=0.76) among tanks or treatments. All endpoint growth performance parameters were significantly different among treatments (P<0.05) (Table 3-4). The FM diet produced significantly higher RG (401.8%) than SPC, SPCaa, and BPWF (205, 294, and 275%, respectively), but more comparable results to BPWFaa, ExBPWF, and ExBPWFaa (305, 310, and 338%, respectively). The commercial SPC provided significantly lower growth than both FM 82 and ExBPWF; but not significantly different from BPWF. RG of supplemented diets was greater than unsupplemented diets. SGR followed a similar trend with FM (0.71) outperforming SPC diets, but not significantly different from ExBPWFaa (0.65). The SPC diet (0.49) had a significantly lower SGR than all other treatments. Fulton’s condition factor (K) differed among between treatments (P<0.01), and was highest for fish fed ExBPWF (1.22), which was significantly higher than SPC and BPWF (1.05 and 1.10, respectively). Diets with low K values were correlated with low consumption and growth, which may indicate lower palatability. Total dry matter consumption was significantly different (P<0.01) and was highest for FM (658 g), followed by ExBPWF (525 g), and ExBPWFaa (491 g), and then lowest for BPWF (335 g), SPCaa (305 g), and SPC (198 g). Feed conversion ratio (FCR) was significantly different between diets (P=0.04). SPCaa fed fish provided the best FCR (1.62), but was not significantly different from SPC (1.74) and BPWF (1.81). Both supplemented BP diets BPWFaa (1.96) and ExBPWFaa (1.95) produced the highest FCRs and were only significantly different from SPCaa. Protein efficiency ratio (PER) was significantly different between treatments (P<0.01). PER was highest in BPWF (1.50) followed by SPCaa (1.49), and these were significantly different from the FM control (1.16). There were significant differences in fish anatomical measurements resulting from of the experimental diets (Table 3-5). The BP diets produced fish which on average had a higher VFI than the FM control or commercial SPC diets. Significant differences existed in VFI (P<0.01). The ExBPWF treatment had the highest VFI (3.4) and SPC had the lowest (1.7), which was significantly lower than all BP diets. The HSI was not 83 significant between diets. However, qualitative examination of liver color did vary among treatments wherein livers of SPC fish tended to be pale in comparison to the control fish or fish fed bioprocessed soy. Color was most variable in the FM control. No significant differences existed in fillet yield, HSI, VSI, and Hunter color analysis of the fillets. Additionally, there were no statistically significant differences in the gastrointestinal histology scores but there was a trend. The ExBPWF treatment provided the highest average score (13.3) for distal sections, and ExBPWFaa provided the lowest score (9.8). FM scored a moderate 11.9, which was considered to be a normal baseline. Physical Pellet Properties Pelleted feeds exhibited significant differences among treatments (Table 3-6). Water activity (aw) ranged from 0.58 for FM to 0.74 for ExBPWFaa. Water stability index (WSI) was moderate in all diets (range 9.65 to 14.43). Pellets did not visibly dissolve until at least 30 min after feeding, which allowed sufficient time for feeding. The highest WSI was for SPC (11.9), which differed significantly (P<0.01) only from ExBPWFaa (6.7). Due to the nature of screw-pressed pellets, WSI was expected to be low to moderate. PDI was very high in all diets (range 98.05 to 99.48%). However, there was a significant difference between BPWFaa, ExBPWF, and ExBPWFaa diets compared to the others. CS varied significantly from 24.36 to 67.03 g force and the FM diet exhibited the lowest CS (24.36). BD ranged from 634.87 to 695.9 kg/m3. FM had a lower BD as well as a visually greater pellet heterogeneity. 84 Hunter color parameters (L, a, b) revealed an association with growth performance. Hunter a (redness) was highest in FM (5.15) and lowest in SPC (2.80). Hunter b (yellowness) was highest in BPWF (22.81) and FM (22.76) and lowest in SPC (18.07). Hunter L (brightness) was highest in SPCaa (68.48) and lowest in FM (47.91). FM provided the largest diameter pellets which was on average 200 µm larger than the 2.5 mm die. Pellet expansion due to pressure changes when exiting die were expected to be minimal due to low dietary starch as well as low processing temperature and pressure of screw-pressed pellets. Discussion The soybean products used in this study demonstrated fish dietary responses to a range of processes, which resulted in differing performance. It is evident that commercial SPC processing results in higher protein than the BP methods used in this study. However, there appears to be other advantages of BP including reduction of antinutritional factors, which is essential for improved growth for Yellow Perch. Regardless of extrusion pretreatment, BP eliminated oligosaccharides from 0.8% raffinose and 4.8% stachyose in commercial WF (Karunanithy et al. 2012). This result was supported by the observation of Dust et al. (2004) who found extrusion had minimal effect on soy flour when compared to other ingredients having higher starch and fiber contents. These results indicate that oligosaccharide removal occurs from either commercial or biological processing, but a small amount (0.24%) of stachyose remains in SPC. Trypsin inhibitors were reduced primarily due to extrusion. Unextruded BPWF and SPC ingredients contained high levels of trypsin inhibitors. Trypsin inhibitors are one 85 of the largest and most diverse groups of ANFs (Rawlings et al. 2004) and their effects could be a factor in diet consumption and utilization. Soybeans contain natural trypsin inhibitors which are effective for insect resistance; contributing to the disruption of digestive enzyme activation. The elimination of natural soybean trypsin inhibitors from thermal treatments and extrusion has been recognized as an essential component of soybean based aquafeeds (Francis et al. 2001). These processes can reduce trypsin inhibitors to safe levels (<5 mg/g or 9500 TIU/g assuming 1µg of trypsin inhibitor has a TIU of 1.9) for most fishes (Viola et al. 1983; Olli et al. 1994b; Anderson and Wolf 1995; Francis et al. 2001). ExBPWF contained lower protein than the BPWF, which could either be an effect of extrusion, BP, starting material, or their combination. This is similar to the results of Allan and Booth (2004) in which soy extrusion resulted in slightly less protein. Extrusion has been reported to reduce certain protein fractions in wheat flour (Rebello and Schaich 1999). This may also indicate a higher amount of non-protein nitrogen (NPN) remaining in the unextruded BPWF, however this is not confirmed. NPN is used in ruminant nutrition to supply gastrointestinal flora with additional nitrogen which is converted into cellular protein (Loosli and McDonald 1968). NPN remaining in bioprocessed material may indicate a limiting agent for monogastric organisms. Growth performance overall was best for the FM control, but the ExBPWFaa treatment was highly comparable and more favorable than SPC diets, despite having lower protein. The considerable variation in protein between reference and BP diets may have been an important factor in the observed performance. We speculate that if diets had been isonitrogenous, there might be a potential for higher RG of fish fed the lower 86 protein diets. For example, adjusting observed RG values by linearly standardizing to the protein content of the control diet would provide an adjusted mean RG of 405% for ExBPWFaa, which would be similar to the control diet (401%). By standardizing RG to protein content, all diets were not significantly different except for the SPC diet (213%). Daily changes in feed intake were observed throughout the trial, independent of dietary treatment. Although this may suggest an environmental fluctuation or disturbance, treatments were randomly distributed and each tank was maintained from a collective water source. Direct comparisons of feed intake, or consumption, can be indicative of palatability (Helland et al. 1996). In addition to a complete nutritional profile, providing feeds with high palatability with high feed intake contributes to increased growth and production. Lack of palatability and reduced consumption can lead to malnutrition, emaciation and death, which was thought to be the cause of significantly lower survival for diet 2 (82.3%), the commercial SPC diet. Lower consumption of the commercial SPC diets may also have increased apparent digestibility as a result of slower feed evacuation rates with increased contact with digestive enzymes (Garber 1983). PDE values showed a greater correlation with RG than did PE. Variable PDE with negligible differences in dietary lipid content between diets may be an indication that protein exhibited a greater nutritional effect than lipid. The diets used in this study consisted of fish oil and flaxseed oil which are fairly well balanced sources of essential fatty acids. Other studies that have found a correlation with lipid content and reduced growth and feed efficiency (Francis et al. 2007; Montero et al. 2008). This is because most plant material lacks important long chain omega-3 fatty acids such as Eicosapentaenoic acid (EPA) and Docosahexaenoic acid (DHA) which are found in fish 87 oil. While fatty acid composition was not specifically examined in this study, we noticed that fish fed the SPC diet had generally paler livers than other treatments. A pale liver color has been found in other species that have been fed diets with essential fatty acid deficiencies (Takeuchi and Watanabe 1982; Watanabe et al., 1989; Ruyter et al., 2006). In addition, excess fat in the visceral cavity is sometimes considered an indication of poor health (Craig et al. 1999; Mathis et al. 2003) and is not desired in cultured food fish. Excess lipids can affect the visual sense and odor of the final product (Grigorakis 2007) and decrease the carcass yield (Mathis et al. 2003). No enteritis was observed and all intestines appeared relatively normal; however, distal intestine sections provided more variance in inflammation scores than did proximal sections, as observed in other research (UrÁN et al. 2008). Other researchers have linked compounds in soy products to enteritis in salmonids (Baeverfjord and Krogdahl 1996; Krogdahl et al. 2000; UrÁN et al. 2008). Significant differences in MC were likely due to textural inequalities resulting in uneven moisture loss during pellet drying. The pellets used in this experiment were dried at room temperature on a forced air drying rack, so drying at or below ambient humidity was limiting. MC may have had an effect on pellet performance parameters such as PDI, BD, CS, and color. Higher moisture contents may lead to better acceptance due to a “softer” texture with lower CS. Water activity was high in all diets. Higher water activity may lead to shorter storage life due to microbiological growth. aw values over 0.50 tend to allow diverse microbial growth at room temperatures. Feeds were stored in a freezer at -20° C to preserve the microbiological and chemical stability. 88 Low CS of the FM diet can be partially attributed to increased heterogeneity of pellet constituents and also that FM and other animal proteins are cooked during processing, which generally decreases their functionality. The softer texture of the FM diet may be associated with higher consumption. A softer texture is also preferred by other species such as Gilthead Sea Bream Sparus aurata L. (Andrew et al. 2004). CS was considerably higher for all soy diets compared with the FM control, and there was no consistent soy processing effects on CS. Our analysis was unable to find any differences associated with PDIs and diet compositions. The differences could be the result of inconsistencies with the pelleting process (e.g., feed rate, temperature) or possibly a fraction of carbohydrate or the addition of carbomethylcellulose (CMC), which was added as a binder to increase the PDI and aw of screw pressed feeds (Ruscoe et al. 2005). A high PDI for transport and handling coupled with a low CS for fish acceptability and palatability would be ideal for commercial aquafeed and aquaculture producers. The FM reference feed in this study was redder, yellower, and darker than soy diets. The commercial SPC diet was brighter (+L), less yellow (-a), and less red (-b) than other soy products tested. Contradictory to these results, others have found lighter colored feeds to contain higher concentrations and availability of lysine than darker colored feeds (Cromwell et al. 1993; Fastinger et al. 2006). SPC and FM diets contained similar amounts of lysine, but BP-soy contained lower lysine. Both SPC and ExBPWF showed an increased L value with lysine supplementation, but BPWF did not. Our results generally agreed with studies that have found that more yellow equates to better nutrient quality (Goihl 1993; Ergul et al. 2003). 89 Summary This nutritional and functional study provides useful information on the value of biological and mechanical soy processing technologies for production of main protein sources in formulated Yellow Perch feeds. We noticed a consistent increase trend in growth with amino acid supplementation within each soy protein source; however, when compared between protein sources, SPC provided more lysine, but also the most restricted growth and health. This indicates that an alternative nutrient limitation or lower palatability affected growth performance of the commercial SPC diets. Our results indicate overall the FM control diet to be a more balanced and bioavailable nutritional composition than the experimental bioprocessed soy proteins. Yellow Perch aquafeed containing soy proteins as a main ingredient is at the early stages of development, and there is a definite potential for these ingredients to be utilized for commercial aquaculture performance, economic sustainability and ultimate success. These results have developed a baseline for designing the next round of experimental diets. The information does inquire the need to develop higher quality BPsoy which would support growth performance equivalent to or superior than diets containing FM, hence reducing cost of commercial food fish production. The improvement of soy macronutrient composition, digestibility, and palatability through extrusion pretreatments and BP optimization depends on information like that presented in this research. 90 Table 3-1. Feed formulations (g/100g dm) of the experimental Yellow Perch diets. Diet # Ingredient FM SPC SPCaa BPWF BPWFaa ExBPWF ExBPWFaa Menhaden FM a 50.0 0.0 0.0 0.0 0.0 0.0 0.0 Commercial SPC 0.0 45.0 45.0 0.0 0.0 0.0 0.0 HQSPC Trial 5 0.0 0.0 0.0 45.0 45.0 0.0 0.0 HQSPC Trial 6 0.0 0.0 0.0 0.0 0.0 45.0 45.0 Yellow corn gluten b 5.0 5.0 5.0 5.0 5.0 5.0 5.0 Wheat flour c 18.0 21.0 21.0 21.0 21.0 21.0 21.0 6.0 5.0 5.0 5.0 5.0 5.0 5.0 Wheat gluten b CMC d 5.0 5.0 5.0 5.0 5.0 5.0 5.0 d Celufil 3.7 3.6 3.6 3.5 3.0 3.5 3.0 Menhaden oil e 4.59 8.19 8.19 8.37 8.37 8.37 8.37 Flax oil f 0.51 0.91 0.91 0.93 0.93 0.93 0.93 0.5 0.5 0.5 0.5 0.5 0.5 0.5 Vitamin premix g Mineral premix h 0.1 0.1 0.1 0.1 0.1 0.1 0.1 i Vitamin C 0.05 0.05 0.05 0.05 0.05 0.05 0.05 0.2 0.2 0.2 0.2 0.2 0.2 0.2 Choline j k Phytase 0.037 0.037 0.037 0.037 0.037 0.037 0.037 Brewer’s yeast l 2.0 2.0 2.0 2.0 2.0 2.0 2.0 j L-Lysine 0.0 0.0 0.3 0.0 0.3 0.0 0.3 L-Betaine j 0.5 0.5 0.5 0.5 0.5 0.5 0.5 j 0.0 0.0 0.2 0.0 0.2 0.0 0.2 L-Methionine Sodium chloride m 1.0 1.0 1.0 1.0 1.0 1.0 1.0 Potassium chloride m 0.8 0.8 0.8 0.8 0.8 0.8 0.8 m Magnesium oxide 0.05 0.05 0.05 0.05 0.05 0.05 0.05 Calcium phosphate m 2.0 1.0 1.0 1.0 1.0 1.0 1.0 a b Special Select, Omega Protein, Houston, TX; Consumers Supply Distributing, Sioux City, IA; c Bob’s Red Mill Natural Foods, Milwaukie, OR; d USB Corporation, Cleveland, OH; e Virginia Prime Gold, Omega Protein, Houston, TX; f Thomas Laboratories, Tolleson, AZ; g ARS 702 premix, Nelson and Sons, Murray, UT; h ARS 640 trace mineral premix, Nelson and Sons, Murray, UT; i U.S. Nutrition, Bohemia, NY; j Pure Bulk, Roseburg, OR; k DSM Nutritional Products, Parsippany, NJ; l Diamond V Mills, Cedar Rapids, IA; m Fisher Scientific, Pittsburg, PA. 91 Table 3-2. Composition of the primary protein sources (g/100g, dm unless noted) incorporated into the experimental diets. EAA=essential amino acids; NEAA=nonessential amino acids; ANFs=antinutritional factors. FM Commercial Unextruded Extruded Constituent (reference) SPC BPWF BPWF Protein 66.77 72.18 61.61 56.86 Moisture (wb) 7.62 9.73 5.14 7.89 Lipid 5.21 0.00 1.70 1.26 Crude fiber 0.18 10.08 0.81 4.86 Ash 25.33 7.10 8.82 5.21 EAA Arginine 3.69 5.30 2.44 3.65 Histidine 1.26 1.84 1.41 1.40 Isoleucine 2.73 3.30 2.89 2.92 Leucine 4.47 5.61 4.64 4.87 Lysine 4.58 4.56 3.47 3.41 Methionine 1.72 1.00 0.83 0.90 Phenylalanine 2.51 3.62 2.89 3.08 Threonine 2.32 2.80 2.36 2.31 Tryptophan 0.58 1.00 0.79 0.82 Valine 3.10 3.51 3.13 3.10 NEAA Alanine 3.97 3.03 2.71 2.66 Aspartic acid 5.47 8.08 6.72 6.45 Cystine 0.48 0.97 0.87 0.88 Glutamic acid 7.73 12.51 8.70 8.85 Glycine 4.81 2.96 2.67 2.51 Hydroxylysine 0.27 0.04 0.81 0.10 Hydroxyproline 1.19 0.08 0.10 0.07 Lanthionine 0.00 0.02 0.00 0.00 Ornithine 0.14 0.04 0.14 0.04 Proline 3.31 3.65 3.17 2.92 Serine 1.85 3.07 2.28 2.73 Taurine 0.42 0.08 0.09 0.10 Tyrosine 2.01 2.57 1.98 2.25 Total AA 58.61 69.64 55.09 56.02 ANFs Raffinose -0.00 0.00 0.00 Stachyose -0.24 0.00 0.00 Phytic acid -0.23 0.39 0.18 Trypsin inhibitor (TIU/g) -13,630 16,750 6,538 92 Table 3-3. Analyzed diet compositions (g/100g dm unless noted) and digestibility results. ADC= Apparent Digestibility Coefficient; GE=gross energy; DE=digestible energy; PE=protein to energy ratio; PDE=protein to digestible energy ratio; EAA=essential amino acid; NEAA=non-essential amino acid. Diet Constituent Protein Moisture (wb) Lipid Crude fiber Ash ADC-P ADC-E GE (MJ GE/kg) DE (MJ DE/kg) PE (g/MJ GE) PDE (g/MJ DE) EAA Arginine Histidine Isoleucine Leucine Lysine Methionine Phenylalanine Threonine Valine NEAA Alanine Aspartic acid Cysetine Glutamic acid Glycine Hydroxylysine Hydroxyproline Proline Serine Taurine Tyrosine FM 44.93 7.90 10.60 3.44 16.80 87.5 81.9 18.77 15.37 23.94 29.22 SPC 43.23 10.10 9.09 3.84 6.90 91.8 76.1 21.05 16.02 20.54 26.99 SPCaa 43.63 10.90 9.57 4.62 6.84 NA NA 21.05 16.02 20.72 27.23 BPWF 36.76 13.90 10.10 4.01 8.65 87.1 68.7 20.66 14.20 17.79 25.89 BPWFaa 37.13 10.00 10.19 4.04 8.90 NA NA 20.70 14.22 17.94 26.11 ExBPWF 37.50 9.68 10.20 3.80 8.77 84.5 63.6 20.62 13.12 18.19 28.58 ExBPWFaa 37.71 11.80 9.69 2.87 8.71 NA NA 20.72 13.19 18.20 28.59 2.30 0.91 1.76 3.36 2.56 1.04 1.89 1.60 2.06 2.78 1.07 1.96 3.62 2.30 0.58 2.20 1.49 2.22 2.75 1.05 1.91 3.57 2.46 0.74 2.21 1.50 2.09 2.06 0.87 1.74 3.28 1.80 0.55 1.96 1.37 1.96 2.01 0.87 1.78 3.22 1.99 0.70 1.96 1.29 1.94 2.07 0.88 1.82 3.29 1.85 0.56 1.99 1.36 2.05 2.05 0.87 1.85 3.34 2.05 0.74 2.02 1.36 2.04 2.62 3.36 0.46 7.56 2.89 0.14 0.56 2.84 1.51 0.25 1.37 1.95 4.12 0.63 9.02 1.77 0.02 0.03 2.87 1.64 0.03 1.50 1.89 4.05 0.63 8.08 1.74 0.00 0.00 2.70 1.72 0.00 1.46 1.77 3.40 0.58 7.15 1.56 0.05 0.03 2.49 1.60 0.03 1.34 1.70 3.31 0.57 6.56 1.53 0.00 0.00 2.29 1.46 0.09 1.29 1.78 3.43 0.58 7.10 1.57 0.03 0.04 2.46 1.51 0.03 1.34 1.80 3.44 0.58 6.85 1.58 0.00 0.00 2.35 1.64 0.09 1.32 93 Table 3-4. Growth performance indices. Values given are treatment means+SE. Values not significantly different (P>0.05) have the same letter within a column. Performance Characteristic Diet RG SGR S TC FCR PER K FM 401.8±20.2a SPC 205.1±9.4b SPCaa 293.8±17.8cd BPWF 274.6±22.7d BPWFaa 304.7±25.9cd ExBPWF 309.7±7.8cd ExBPWFaa338.0±23.7c 0.71±0.02a 0.49±0.01b 0.60±0.02c 0.58±0.03cd 0.61±0.03cd 0.62±0.01cd 0.65±0.02ad 97.6±1.4a 71.4±4.3b 77.4±1.2bc 79.8±3.0bc 84.5±4.5c 95.2±0.0a 91.7±3.6ac 658.4±49.9a 198.4±13.1b 305.1±13.0bc 335.2±40.6c 415.7±64.9cd 525.0±50.9d 491.3±40.9d 1.92±0.05a 1.74±0.34ab 1.62±0.10b 1.81±0.07ab 1.96±0.10a 1.92±0.09a 1.95±0.05a 1.16±0.03a 1.33±0.03b 1.49±0.04b 1.50±0.07b 1.40±0.07b 1.40±0.07b 1.37±0.03b 1.21±0.02a 1.05±0.04b 1.16±0.04ac 1.10±0.02bc 1.21±0.02a 1.22±0.02a 1.20±0.02a Relative growth (RG, %), specific growth rate (SGR), survival (S, %) total consumption (TC, dmb, g), food conversion ratio (FCR), protein efficiency ratio (PER), and Fulton-type condition factor (K) 94 Table 3-5. Necropsy variables for Yellow Perch. Values given are treatment means+SE. Values not significantly different (P>0.05) have the same letter within a given column. GI=gastrointestinal distal inflammation score; HSI=hepatasomatic index; VSI=viscerasomatic index; VFI=visceral fat index. Diet FM SPC SPCaa BPWF BPWFaa ExBPWF ExBPWFaa Fillet/Wt. 34 ± 1a 32 ± 1a 36 ± 2a 33 ± 1a 34 ± 1a 32 ± 2a 35 ± 1a Anatomical Characteristic GI Score HSI VSI 11.9 ± 0.9a 11.0 ± 0.8a 11.0 ± 1.1a 11.8 ± 1.4a 11.6 ± 1.2a 13.3 ± 1.3a 9.8 ± 0.5a 2.0 ± 0.1a 1.6 ± 0.1b 1.9 ± 0.1ab 2.0 ± 0.1a 1.9 ± 0.1ab 1.9 ± 0.1ab 1.9 ± 0.1ab 5.1 ± 0.3a 4.9 ± 0.3a 5.9 ± 0.4a 5.4 ± 0.3a 5.5 ± 0.3a 5.3 ± 0.3a 5.9 ± 0.4a VFI 2.2 ± 0.2ab 1.7 ± 0.2a 2.4 ± 0.2abc 3.0 ± 0.3bcd 3.1 ± 0.3cd 3.4 ± 0.3d 3.1 ± 0.3cd 95 Table 3-6. Physical properties of the feed extrudates. Values given are treatment means±SE. Values not significantly different (P>0.05) have the same letter within a given row. Diet Properties FM SPC SPCaa BPWF BPWFaa ExBPWF ExBPWFaa aw (-) BD (kg/m3) CS (g) PDI (%) WSI (%) L (-) a (-) b (-) Dia (mm) 0.58±0.02a 634.8±3.0a 24.4±0.7a 98.1±0.4a 10.2±0.0ab 47.9±0.2a 5.2±0.0a 22.8±0.1a 2.2±0.0a 0.67±0.00b 648.6±3.2b 56.1±1.8b 98.1±0.8a 11.9±0.0a 58.5±0.1b 2.8±0.0b 18.1±0.1b 2.1±0.1a 0.69±0.00c 659.4±2.4bc 42.9±2.3c 98.1±0.7a 9.1±0.0ab 68.5±0.5c 3.2±0.1c 20.2±0.1c 2.1±0.0a 0.68±0.00bc 674.5±0.5d 44.9±3.8bc 98.3±0.3a 8.9±0.0ab 59.9±0.3bd 4.3±0.0d 22.8±0.1a 2.0±0.0a 0.68±0.00bc 688.9±0.6e 54.8±2.3b 99.3±0.3b 9.1±0.0ab 53.7±0.2e 4.4±0.0d 21.4±0.1d 2.0±0.0a 0.68±0.00bc 669.3±2.8cd 67.0±2.2b 99.5±0.2b 8.2±0.0ab 60.6±0.3d 2.9±0.0b 20.3±0.0ce 2.0±0.0a 0.74±0.01d 695.9±2.2e 60.1±3.9b 99.5±0.3b 6.7±0.0b 63.8±0.4f 2.9±0.0b 20.7±0.1e 2.0±0.0a MC (% db) = moisture content; aw (-) = water activity; BD (kg/m3) = bulk density; CS (g) = compressive strength; PDI (%) = pellet durability index; WSI (%) = water solubility index in still water; L (-) = Hunter brightness; a(-) = Hunter yellowness; b(-) = Hunter redness; Dia (mm) = diameter. 96 CHAPTER 4. PERFORMANCE OF YELLOW PERCH FED BIOPROCESSED SOYBEAN MEAL Introduction The increasing cost, demand, and fixed availability of FM has stimulated an increased use of plant-based aquafeed (Gatlin et al. 2007; Glencross et al. 2007). Soybeans Glycine max are generally considered to be the most favorable plant material for use in carnivorous fish feeds, due to their high yields and nutritional quality (Gatlin et al. 2007). However, there are still apparent and unidentified biologically active compounds in soy products that inhibit the complete replacement of FM in carnivorous fish feeds (Gatlin et al. 2007; Barnes et al. 2014). A balance between feed cost and improved nutritional factors much be reached for Yellow Perch Perca flavescens producers to become more profitable (Malison 2003). Soy proteins are known to vary in composition based on processing method, plant growing conditions, and genetic variety (Swick 2007). Soybeans which have been processed into soy protein concentrate (SPC) have provided favorable growth performance in carnivorous fish culture but are currently too costly for broad application (Olli et al. 1994b; Ingh et al. 1996). Typical soybean meal (SBM), however, is not as well tolerated by carnivorous fish (van den Ingh et al. 1991; Olli et al. 1994b; Baeverfjord and Krogdahl 1996; Kasper et al. 2007). Bioprocessing (BP) of soy white flake (WF) and SBM have been shown to provide favorable growth along with a reduction in physiological and morphological problems normally caused by WF or SBM (Skrede et al. 2002; Yamamoto et al. 2010). The present research explored the effects of additional processing to commercial SBM using three primary soy processing factors (extrusion pretreatment, BP, typical 97 SBM) and two secondary factors (soybean variety and FM replacement level) in experimental diets for juvenile Yellow Perch. The objective was to determine growth or health benefits from these processes, and illustrate the effect of increasing dietary inclusion levels. Methods and Materials Experimental Design and Diet Formulation A 16-week Yellow Perch feeding trial was conducted using a factorial design with four sampling points to assess growth performance and organosomatic responses of soy products. Fourteen soy-based diets and an FM control were designed to examine differences in SBM variety (GMO vs. Non-GMO) and BP with or without extrusion pretreatment. Diet descriptions and codes are provided in Table 4-1. Soy products were extruded with a Plasti-Corder PL2000 single-screw laboratory extruder (C.W. Brabender, South Hackensack, NJ) using conditions optimized for oligosaccharide hydrolysis (Karuppuchamy 2011; Karunanithy et al. 2012). BP parameters were held constant with the exception of GMO-BP-SBM (2), which used a modified process but duplicated feedstock to GMO-BP-SBM (1). Bioprocessed products were obtained from Prairie AquaTech (Brookings, SD). The primary soy ingredients were included in the diet at two levels of FM replacement (40% or 70%). Chemical analyses of primary protein sources were completed by certified laboratories (Table 4-2). Analyses were completed for crude protein (%N x 6.25, AOAC 2006, method 990.03), crude fat (AOAC 2006, method 921.39), crude fiber (AOAC 2006, method 978.10), moisture content (AOAC 2006, method 934.01), ash (AOAC, method 942.05) and amino acids (AOAC 2006, method 982.30 E (a, b, c)). Trypsin 98 inhibitor activity (AACC 2006, method 22-40) was measured using the same certified laboratory. Main protein sources were incorporated into diets formulated for Yellow Perch based on requirements suggested by Twibell and Brown (2000); Hart et al. (2010); and Dr. M. Brown (personal communication); unknown requirements were based on Rainbow Trout Oncorynchus mykiss requirements (NRC 2011). Diets were formulated on a dry matter basis with a targeted composition of 45% crude protein, 9% crude lipid, and protein to energy (PE) ratio of 23.2 g protein/MJ by modifying celufil and soybean oil. High (70%) FM replacement rate formulations (Table 4-3) contained a higher amount of soybean oil than low (40%) replacement diets (Table 4-4) in order to maintain isocaloric diets. Feed supplements were applied in equal amounts among all diets. Large particle ingredients were ground with a Fitzpatrick comminutor (Elmhurst, IL) prior to dry blending. Dry ingredients were then blended in a Hobart HL200 mixer (Troy, OH) where oil and water are added and blended until homogenous for approximately 10 min. Dough was screw-pressed using a Hobart 4146 grinder equipped with variable speed feed screw, 2.5 mm die, and cutting head. Extrudates were then dried in a Despatch UDAF electric conveyor drier (Minneapolis, MN) with maximum temperature set at 120°C. Feeds were then allowed to cool prior to packaging, and stored at -20°C pending use. Culture System The 6,738 L recirculating aquaculture system (RAS) consisted of 60, 110 L circular tanks equipped with Cornell-style dual-drains, clarifier sump, bead filter, secondary sump with water level control and electronic water quality monitoring devices, 99 moving bed bioreactor, UV filter, and heater/chiller. Tanks and bioreactor were each individually oxygenated with air diffusers fed by a regenerative blower. The RAS was supplied with municipal water, dechlorinated with adsorptive carbon and stored in a 15,200 L head tank. Temperature was maintained at 22°C (range 19-23). Flow rate was monitored daily (3-4 L/min) using calibrated manometers installed on each tank supply. Temperature, dissolved oxygen and pH were measured daily, while ammonia, nitrite, alkalinity, and chlorine were measured weekly and maintained within acceptable levels for cool-water fish culture (Timmons and Ebeling 2007; NRC 2011). Feeding Trial Juvenile yellow perch of mean weight 6.81g (0.10 SE) were randomly stocked (n=1,200) at a density of 20 fish per tank. Each of the 15 treatments were randomly assigned to four experimental units. After stocking, fish were acclimated to experimental feeds by incrementally increasing test diets mixed with the control for three days. Following the feed acclimation period, fish were fed slightly above apparent satiation as determined by the pellet counting method (Helland et al. 1996). Fish were fed to apparent satiation twice daily (0800 and 1600 hr) and feeding rates were modified to slightly overfeed based on feed consumption assessments at least twice per week. Consumption was estimated by counting the uneaten pellets 30 to 45 min after feeding. This method assumes fish do not eat after the pellet count and that pellet size variation has no effect on intake (Helland et al. 1996). Pellets were sieved to minimize pellet size variability. Estimated feed intake values were used for the indirect inference of palatability, and in the conversion calculations as follows: 100 Feed conversion ratio (FCR) was calculated as: , Protein efficiency ratio (PER) was calculated as: , , , Tank biomass was sampled a total of 5 times (stocking, wk 4, wk 8, wk 12, wk 16) in order to monitor changes in growth throughout the trial. Mortalities were accounted for in growth metrics by using average weight per fish from dividing the tank biomass by the number of individuals present. Average final weight per fish was then used to calculate growth performance metrics. Upon completion of the trial, three fish per tank were euthanized (300 ppm buffered MS-222) and examined for ending organosomatic indices. Relative growth (RG) was calculated as: Δmass wet, g initialmass wet, g 100% Specific growth rate (SGR) calculated as: ln finalwt g ln startwt g 100 Fulton-type condition factor (K) was calculated as: 100,000. Hepatosomatic Index (HSI) was calculated as: HSI Viscerosomatic Index (VSI) was calculated as: VSI Visceral Fat Index (VFI) was calculated as: VFI x 100, x 100, and x 100. 101 Statistical Analysis Treatment data were examined for normality and homogeneity of variance (SAS Institute Inc. 2011); transformations were completed as necessary. Results were analyzed first against the reference diet using one-way Analysis of Variance (ANOVA). Subsequently, the reference diet was removed and data were analyzed for effects of soy ingredients and FM replacement level. Here, two-way Analysis of Covariance (ANCOVA) was used with soy ingredient as a main factor and FM replacement level as a covariate. If either analysis was significant (a priori α=0.05), Duncan’s multiple range post hoc test was implemented. Survival data were analyzed with the chi-squared statistic from a non-parametric Kruskal-Wallis test. Results There was apparent differences in proximate composition, amino acids, and trypsin inhibitors among SBM and BP-SBM products (Table 4-2). Average crude protein of BP-SBM products was improved by an average of 9.8% over GMO-SBM and 5.6% over non-GMO SBM. The GMO SBM had less protein, fiber, and ash, but higher gross energy and lipid than the non-GMO variety. Fiber was reduced in BP-SBM, but not others. Ash was higher in all BP-SBM products than SBM. Leucine, Threonine, aspartic acid, and glycine were higher in BP-SBM than both varieties of un-converted SBM. Trypsin inhibitors were substantially reduced in all BP-SBM products regardless of extrusion pretreatment. Typical SBM products averaged 6,298 TIU/g (dm) and bioprocessed products averaged 379 TIU/g (dm). 102 Water quality in the RAS was maintained within reasonable limits throughout the trial duration (temperature 19.2-23.0°C, D.O. 6-9 mg/L, pH 6.6-8.6, unionized ammonia <0.1 mg/L, free chlorine <0.06 mg/L). Sodium bicarbonate and sodium chloride were added when necessary to maintain a consistent water chemistry (pH, chloride concentration, and alkalinity) throughout the trial. Soy consumption varied significantly among treatments (P=0.03) and revealed that differences were a result of BP (P=0.03) to a greater effect than FM replacement level (P=0.29) (Table 4-5). The fish accepted most diets readily, with the exception of the low pH GMO-BP-SBM (2) diets 12 and 13 (pH 5.05 and 4.45, respectively) which were not accepted readily by the fish, indicating a problem with palatability. All other diets ranged from pH 5.88 (diet 3) to 6.24 (diet 14) and did not show a correlation with consumption or growth performance parameters. Ex-GMO-BP-SBM at a low inclusion level (diet 8) provided the highest consumption (623g, dm) and resulted in moderate growth and efficiency parameters. Survival was not significantly affected by main ingredient (P=0.92; chisquared=7.3; df=14) or FM replacement level (P=0.36; chi-squared=0.8; df=1). Survival was high and the few mortalities observed were attributed to stress from handling during sampling events. The lowest survival was observed for two BP soy products Ex-GMOBP-SBM and GMO-BP-SBM (2) which also presented reduced relative growth rates and increased FCR. Relative growth (RG) was improved over an FM-based reference diet when 40% of the FM was replaced with most BP-SBM products. The ANCOVA for RG was significant (P=0.02) with covariate FM replacement level also significant (P<0.01). Five soy treatments displayed higher RG than the FM reference diet and nine were lower 103 (Figure 4-1). Dietary soy product and inclusion rate effects created a range of RG from 62.1% greater than FM to 124.0% lower than FM. The BP-SBM protein source improved RG over the reference diet at both inclusion levels. At a low FM replacement level, three processed soy products (BP-SBM, Ex-BP-SBM, and GMO-BP-SBM (1)) and one conventional soy product (GMO-SBM) improved RG over the reference diet. Both conventional soybean meals provided similar RG to the reference diet at low FM replacement levels. The slowest RG was observed when 70% of FM was replaced with Ex-GMO-BP-SBM, GMO-SBM, or GMO-BP-SBM (2). Specific growth rate (SGR) analysis revealed a pattern similar to RG and provided a significant ANCOVA (P=0.02) with covariate FM replacement rate (P<0.01). Fulton’s condition factor (K) provided insignificant (P=0.08) influence from primary protein source. However, when low inclusion soy and FM diets were removed from the data, significant differences existed (P=0.02). Two bioprocessed soy products GMO-BP-SBM (1) and Ex-BP-SBM produced significantly higher (P<0.05) condition factor than GMO-SBM, conventional soybean meal. Feed conversion ratio (FCR) was significantly affected by treatment (P=0.01). Most of the differences were attributed to FM replacement level (P<0.01) over soy treatment (P=0.25). FCR was lowest for diets 6 (0.97) and 1 (0.99) and highest for diets 7 (1.26) and 13 (1.26). Protein efficiency ratio (PER) was also significant (P=0.02) and produced identical results to FCR as is expected for highly isonitrogenous diets. Opposite of FCR, PER signifies a unit of growth for each unit of protein, so higher values indicate greater protein efficiency. Hepatasomatic index (HSI) was significantly different (P<0.01) among diets. HSI of both unconverted SBM (1.59) and GMO-SBM (1.63) and FM (1.74) showed lower HSI than BP products (average 2.15). Diet 2 provided a significantly higher HSI (3.37) 104 than all other diets, indicating possible problems with liver function and lipid storage. Viscerasomatic index (VSI) was also significant (P<0.01) with high VSI values when fed high FM replacement levels of BP-SBM and GMO-BP-SBM (2). Lower inclusion of the duplicate products responded similar to FM. The FM ref diet provided the lowest fillet yield (33.4%), and soy products maintained an average of approximately 40% with the exception of diet 3 which reached 57.5%. Discussion Bioprocessing had a substantial effect on nutritional composition, which is consistent with other compositional results of BP-soy (Osagie and Eka 1998; Refstie et al. 2005) where protein was increased and ANFs were removed. Antinutritional trypsin inhibitors were also reduced substantially from previously measured BP-WF (16,750 TIU/g), SPC (13,630 TIU/g) to extruded BP-WF (6,538 TIU/g), SBM (5647-6950 TIU/g), and much lower levels in the present experimental soy. All BP products were also exposed to the same degree of forced-air drying (<100°C) subsequent to BP. The lowest TIU value was obtained in the low pH GMO-BP-SBM (2) (131 TIU/g), indicating some susceptibility of trypsin inhibitors to the specific BP conditions. Severely reduced growth was found with high inclusions of traditional GMOSBM and the low pH GMO-BP-SBM (2) indicated a critical buffering or electrolyte misbalance that was interfering with the final palatability or digestibility. Organic acidifiers have been recommended as feed supplements (Luckstadt 2008), but the acidity of GMO-BP-SBM (2) may have decreased palatability resulting in lower growth of diets 12 and 13. 105 Accurate measures of palatability and consumption are difficult to obtain, and common errors in bioenergetics modeling has been attributed to inaccurate consumption estimates (Bajer et al. 2003). We used pellet counting as the consumption method of choice, due to the ease of implementation, and the consistency of pellets (Helland et al. 1996). This method, however, assumes that feeding is not selective on certain pellet sizes, and that no pellets went down the drain (Helland et al. 1996). Drain restrictors were placed on drains, which blocked uneaten pellets from entering the waste streams. Although extruded soy products can offer improved digestibility (Opstvedt et al. 2003), extrusion in this study was primary accomplished to improve the degree of hydrolysis during bioprocessing. Research has found extruded soy to have a greater susceptibility to enzymatic hydrolysis than unextruded soy (Björck et al. 1984). In addition, extrusion can reduce ANFs such as trypsin inhibitor activity (Barrows et al. 2007) and phytic acid (Allan and Booth 2004) prior to bioprocessing. Generally, the FM reference tended to produce intermediate growth performance compared with soy treatments which provided either improved or depressed performance in each metric, depending on product and inclusion rate. Lesser inclusion rates (Barnes et al. (2014) also found supporting evidence that 35% fermented soybean meal provided equivalent growth FM in Rainbow Trout Oncorhynchus mykiss diets. Summary In conclusion, implications of this research could provide a better understanding of Yellow Perch nutritional requirements and soybean bioprocessing technology. This research has shown that soy processing method has a significant effect on growth performance of Yellow Perch, and extrusion pretreatment had a lesser effect. Growth 106 performance was also sensitive to specific BP parameters, resulting in both commendable and defective soy products. As the present study suggests, the future of alternative aquafeeds and the advancement of Yellow Perch aquaculture depend on continued research into replacing FM through developing novel feed and feed ingredient processing technologies. 107 Table 4-1. Primary ingredients, fish meal (FM) replacement levels, and coding of FM and SBM treatments that are either Extruded (Ex), Bioprocessed (BP), GMO variety. Diet Label 1 2 3 4 5 6 7 FM Replace Level 40% 70% 40% 70% 40% 70% Main Ingredient Reference Ex-BP-SBM Ex-BP-SBM GMO-BP-SBM (1) GMO-BP-SBM (1) GMO-SBM GMO-SBM Diet Label 8 9 10 11 12 13 14 15 FM Replace Level 40% 70% 40% 70% 40% 70% 40% 70% Main Ingredient Ex-GMO-BP-SBM Ex-GMO-BP-SBM BP-SBM BP-SBM GMO-BP-SBM (2) GMO-BP-SBM (2) SBM SBM 108 Table 4-2. Proximate composition, trypsin inhibitor activity (TIA), and amino acid profile of the main protein sources. Values are g/100 g dm unless noted. ANF=antinutritional factor; EAA=essential amino acid; NEAA=non-essential amino acid. Soy Product Constituent Protein Moisture (wb) Lipid Crude fiber Ash Energy (MJ/kg) EAA Arginine Histidine Isoleucine Leucine Lysine Methionine Phenylalanine Taurine Threonine Tryptophan Valine NEAA Alanine Aspartic acid Cysteine Glutamic acid Glycine Hydroxylysine Hydroxyproline Lanthionine Ornithine Taurine Proline Serine Tyrosine Total AA ANF TIA (TIU/g) SBM 57.06 9.02 1.05 6.16 7.24 19.7 GMOSBM 52.94 12.37 1.13 2.93 6.38 21.3 BP- Ex-BP- GMO-BP- GMO-BP- Ex-GMOSBM SBM SBM (1) SBM (2) BP-SBM 65.83 62.25 61.53 61.19 62.71 5.86 6.31 3.45 4.74 3.11 0.83 0.79 0.79 0.39 1.02 1.91 6.25 3.93 4.66 1.96 11.11 9.00 9.47 5.72 10.95 20.2 20.1 19.7 19.0 19.6 4.02 1.33 2.38 3.94 3.26 0.70 2.58 0.09 1.86 0.64 2.53 3.81 1.36 2.45 4.01 3.34 0.71 2.63 0.03 1.91 0.83 2.74 4.06 1.57 3.55 5.72 3.88 1.03 3.65 0.03 2.72 1.00 3.83 3.45 1.38 3.13 5.10 3.22 0.94 3.26 0.03 2.55 0.87 3.43 3.93 1.50 3.14 5.10 3.61 0.95 3.16 0.02 2.50 0.93 3.38 4.00 1.51 3.01 4.92 3.65 0.92 3.13 0.05 2.39 0.88 3.13 3.94 1.54 3.22 5.16 3.62 0.93 3.32 0.02 2.48 0.95 3.45 2.12 5.89 0.73 9.01 2.16 0.02 0.13 0.02 0.04 0.09 2.76 2.12 1.81 50.14 2.24 5.85 0.70 8.88 2.18 0.03 0.08 0.00 0.06 0.03 2.60 2.02 1.78 50.24 3.22 7.45 0.96 9.44 2.95 0.05 0.06 0.00 0.12 0.03 3.34 2.93 2.50 64.06 2.95 6.78 0.91 8.74 2.82 0.13 0.12 0.00 0.11 0.03 3.22 2.76 2.32 58.22 2.82 6.85 0.90 9.28 2.78 0.02 0.07 0.00 0.05 0.02 3.26 2.74 2.25 59.24 2.70 6.82 0.94 9.59 2.63 0.15 0.06 0.00 0.05 0.05 3.03 2.61 2.23 58.4 2.85 6.95 0.91 9.38 2.81 0.04 0.07 0.00 0.10 0.02 3.18 2.69 2.36 59.97 5647 6950 853 353 269 131 291 109 Table 4-3. Feed formulations and nutrient composition including only high level FM replacement (70%) treatments. All values reported as g/100 g dm. Diet Diet Composition Crude Protein Crude Lipid Crude Fiber Ash NFE GE (MJ/kg) PE (g CP/MJ) pH Ingredient Fishmeal Ex-BP-SBM GMO-BP-SBM (1) GMO-SBM Ex-GMO-BP-SBM BP-SBM GMO-BP-SBM (2) SBM Empyreal 75 Wheat flour Wheat gluten CMC Celufil Vitamin premix Mineral premix Stay-C L-Lysine Histidine Taurine Sodium chloride Potassium chloride Magnesium oxide Calcium phosphate Calcium propionate Menhaden Oil Soybean Oil Totals 1 45 9 12.7 17.1 15 19.6 23.0 6.01 3 45 9 11.4 17.6 15.7 20.6 21.8 5.88 5 45 9 10.4 17.7 16.7 20.8 21.6 5.93 7 45 9 5.6 19 20.1 21 21.4 6.22 9 45 9 10.3 17.5 16.8 21.5 20.9 5.94 11 45 9 11.6 17.2 16 20.9 21.5 6.15 13 45 9 10.2 17.7 16.8 21.5 20.9 4.45 15 45 9 8.8 12.2 23.7 21.6 20.8 5.91 41.7 12.51 12.51 12.51 12.51 12.51 12.51 12.51 0 31.3 0 0 0 0 0 0 0 0 31.67 0 0 0 0 0 0 0 0 36.81 0 0 0 0 0 0 0 0 31.08 0 0 0 0 0 0 0 0 29.6 0 0 0 0 0 0 0 0 31.89 0 0 0 0 0 0 0 0 34.39 8.79 8.79 8.79 8.79 8.79 8.79 8.79 8.79 15 15 15 15 15 15 15 15 8 8 8 8 8 8 8 8 3 3 3 3 3 3 3 3 10.12 6.74 6.37 1.4 7.03 8.44 6.04 3.76 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.8 0.8 0.8 0.8 0.8 0.8 0.8 0.8 0.04 0.04 0.04 0.04 0.04 0.04 0.04 0.04 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 1.23 1.23 1.23 1.23 1.23 1.23 1.23 1.23 1.27 1.27 1.27 1.27 1.27 1.27 1.27 1.27 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 1.3 1.3 1.3 1.3 1.3 1.3 1.3 1.3 0.0025 0.0025 0.0025 0.0025 0.0025 0.0025 0.0025 0.0025 6.13 6.13 6.13 6.13 6.13 6.13 6.13 6.13 0 1.27 1.27 1.1 1.2 1.27 1.38 1.16 100 100 100 100 100 100 100 100 110 Table 4-4. Feed formulations and nutrient composition including only low level FM replacement (40%) treatments. All values reported as g/100 g dm. Diet Composition 2 Crude Protein 45 Crude Lipid 9 Crude Fiber 12.0 Ash 18.5 NFE 15.4 GE (MJ/kg) 20.5 PE (g CP/MJ) 22.0 pH 5.91 Ingredient Fishmeal 25.02 Ex-BP-SBM 17.89 GMO-BP-SBM (1) 0 GMO-SBM 0 Ex-GMO-BP-SBM 0 BP-SBM 0 GMO-BP-SBM (2) 0 SBM 0 Empyreal 75 8.79 Wheat flour 15 Wheat gluten 8 CMC 3 Celufil 8.1875 Vitamin premix 1 Mineral premix 1 Stay-C 0.1 L-Lysine 0.8 Histidine 0.04 Taurine 0.5 Sodium chloride 1.23 Potassium chloride 1.27 Magnesium oxide 0.02 Calcium phosphate 1.3 Calcium propionate 0.0025 Menhaden Oil 6.13 Soybean Oil 0.72 Totals 100 4 45 9 11.4 18.5 16.0 21 21.4 5.9 6 45 9 8.6 19.3 17.9 20.9 21.5 6.09 Diet 8 45 9 11.3 18.4 16.1 21.2 21.2 5.9 25.02 0 18.1 0 0 0 0 0 8.79 15 8 3 7.9775 1 1 0.1 0.8 0.04 0.5 1.23 1.27 0.02 1.3 0.0025 6.13 0.72 100 25.02 0 0 21.03 0 0 0 0 8.79 15 8 3 5.1375 1 1 0.1 0.8 0.04 0.5 1.23 1.27 0.02 1.3 0.0025 6.13 0.63 100 25.02 0 0 0 17.76 0 0 0 8.79 15 8 3 8.3575 1 1 0.1 0.8 0.04 0.5 1.23 1.27 0.02 1.3 0.0025 6.13 0.68 100 10 45 9 12.0 18.2 15.6 20.9 21.5 6.19 12 45 9 11.3 18.6 16.0 20.8 21.6 5.05 14 45 9 10.5 15.4 20.0 21.1 21.3 6.24 25.02 0 0 0 0 16.92 0 0 8.79 15 8 3 9.1475 1 1 0.1 0.8 0.04 0.5 1.23 1.27 0.02 1.3 0.0025 6.13 0.73 100 25.02 0 0 0 0 0 18.22 0 8.79 15 8 3 7.7875 1 1 0.1 0.8 0.04 0.5 1.23 1.27 0.02 1.3 0.0025 6.13 0.79 100 25.02 0 0 0 0 0 0 19.65 8.79 15 8 3 6.4875 1 1 0.1 0.8 0.04 0.5 1.23 1.27 0.02 1.3 0.0025 6.13 0.66 100 111 Table 4-5. Survival (S, %), mean relative growth (RG, %), specific growth rate (SGR), Fulton-type condition factor (K), total tank consumption (TC, g), food conversion ratio (FCR), and protein efficiency ratio (PER) for Yellow Perch fed experimental diets. Values given are treatments means±SE. Significant differences (P<0.05) from one-way analysis of variance (ANOVA) are indicated by different letters within a given column. Diet 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 S 97.5±2.5 96.3±2.4 96.3±3.4 96.7±2.9 96.3±1.3 97.5±2.5 95.0±5.0 96.3±2.4 91.3±4.3 96.3±2.4 97.5±2.5 91.3±5.2 92.5±3.2 98.8±1.3 96.3±2.4 Performance Characteristic SGR K TC RG abc 433±20 462±18ab 427±24abc 452±33ab 394±20abcd 444±31abc 342±32cd 403±37abcd 368±33bcd 495±20a 437±21abc 416±37abc 309±47d 430±17abc 375±41bcd abc 1.49±0.03 1.54±0.03ab 1.47±0.03abc 1.52±0.05ab 1.42±0.04abcd 1.51±0.05abc 1.32±0.07cd 1.44±0.07abcd 1.37±0.06bcd 1.59±0.03a 1.48±0.04abc 1.44±0.08abc 1.24±0.10d 1.49±0.03abc 1.38±0.08bcd 1.25±0.05 1.26±0.05 1.25±0.05 1.22±0.03 1.29±0.07 1.21±0.04 1.15±0.03 1.20±0.04 1.20±0.04 1.19±0.05 1.18±0.05 1.19±0.06 1.21±0.03 1.21±0.05 1.21±0.03 abcd 561±16 608±13ab 596±2abc 590±28abc 575±29abcd 572±22abcd 613±29ab 623±14a 605±44ab 598±25abc 558±11abcd 529±25cd 509±14d 553±5abcd 539±19bcd FCR PER ab 0.99±0.03 1.01±0.04ab 1.06±0.04ab 1.05±0.05ab 1.11±0.05abc 0.97±0.03a 1.26±0.06c 1.02±0.05ab 1.15±0.05bc 1.01±0.06ab 1.04±0.04ab 1.05±0.05ab 1.26±0.10c 1.03±0.03ab 1.12±0.06abc 2.33±0.07ab 2.32±0.10ab 2.20±0.08abcd 2.24±0.11ab 2.13±0.10abcd 2.40±0.07a 1.91±0.09cd 2.27±0.11ab 2.06±0.08abcd 2.30±0.12ab 2.28±0.08ab 2.23±0.12abc 1.90±0.16d 2.26±0.06ab 2.04±0.11bcd 112 Standardized Relative Growth (%) 100.0 50.0 62.1 28.3 19.1 11.1 FM 3.7 Ref. 0.0 -2.9 -50.0 -6.2 -17.4 -29.9 -39.4 -58.0 -100.0 -64.8 -91.8 -150.0 -124.0 -200.0 10 2 4 6 11 1 14 3 12 8 5 15 9 7 13 Diet Figure 4-1. Average relative growth (RG, %) response standardized to reference diet ([treatment average RG] – [reference average RG]). Dark bars indicate 40% FM replacement, light bars indicate 70% FM replacement. Different overhead line ranges indicate significant difference (P<0.05) among treatments. 113 REFERENCES Aksnes, A., and J. Opstvedt. 1998. Content of digestible energy in fish feed ingredients determined by the ingredient-substitution method. Aquaculture 161(1-4):45-53. Alarcón, F., M. Díaz, and F. Moyano. 1997. Studies on digestive enzymes in fish: Characterization and practical applications. Cahiers Options Mediterraneennes 22:113-121. Allan, G. L., and M. A. Booth. 2004. Effects of extrusion processing on digestibility of peas, lupins, canola meal and soybean meal in Silver Perch Bidyanus bidyanus (Mitchell) diets. Aquaculture Research 35(10):981-991. Andersen, N. G. 1998. The effect of meal size on gastric evacuation in whiting. Journal of Fish Biology 52(4):743-755. Anderson, R. L., and W. J. Wolf. 1995. Compositional changes in trypsin inhibitors, phytic acid, saponins and isoflavones related to soybean processing. Journal of Nutrition 125(3s):581-588. Andrew, J. E., J. Holm, and F. A. Huntingford. 2004. The effect of pellet texture on the feeding behaviour of Gilthead Sea Bream (Sparus aurata L.). Aquaculture 232(14):471-479. Aslaksen, M. A. and 8 coauthors. 2007. Screening of nutrient digestibilities and intestinal pathologies in Atlantic Salmon Salmo salar, fed diets with legumes, oilseeds, or cereals. Aquaculture 272(1-4):541-555. Austreng, E. 1978a. Digestibility determination in fish using chromic oxide marking and analyses of contents from different segments of the gastrointestinal tract. Aquaculture 13(3):265-272. 114 Austreng, E. 1978b. Digestibility determination in fish using chromic oxide marking and analysis of contents from different segments of the gastrointestinal tract. Aquaculture 13(3):265-272. Badiola, M., D. Mendiola, and J. Bostock. 2012. Recirculating Aquaculture Systems (RAS) analysis: Main issues on management and future challenges. Aquacultural Engineering 51:26-35. Baeverfjord, G., and Å. Krogdahl. 1996. Development and regression of soybean meal induced enteritis in Atlantic Salmon Salmo salar L., distal intestine: a comparison with the intestines of fasted fish. Journal of Fish Diseases 19(5):375-387. Bailey, J., and A. Alanara. 2006. Digestible energy need (DEN) of selected farmed fish species. Aquaculture 251(2-4):438. Bajer, P. G., G. W. Whitledge, R. S. Hayward, and R. D. Zweifel. 2003. Laboratory evaluation of two bioenergetics models applied to yellow perch: identification of a major source of systematic error. Journal of Fish Biology 62(2):436-454. Bangoula, D., J. Parent, and F. Vellas. 1992. Nutritive value of white lupin (Lupinus albus var Lutop) in Rainbow Trout (Oncorhynchus mykiss). Effect of extrusion cooking. Reproduction, nutrition, development 33(4):325-334. Barnes, M. E. 2014. Inclusion of fermented soybean meal in rainbow trout diets. Ph.D. dissertation. South Dakota State University, Brookings. Barnes, M. E. and 4 coauthors. 2014. Rainbow Trout rearing performance, intestinal morphology, and immune response after long-term feeding of high levels of fermented soybean meal. North American Journal of Aquaculture 76(4):333-345. 115 Barrows, F. T. and 4 coauthors. 2008. The effect of vitamin premix in extruded plantbased and fish meal based diets on growth efficiency and health of Rainbow Trout, Oncorhynchus mykiss. Aquaculture 283(1):148-155. Barrows, F. T., T. G. Gaylord, W. M. Sealey, and S. D. Rawles. 2012. Database of nutrient digestibility's of traditional and novel feed ingredients for trout and Hybrid Striped Bass. Available: http://www.ars.usda.gov/Main/ dowcs.htm?docid=21905 (June 2014). Barrows, F. T., and R. W. Hardy. 2001. Nutrition and feeding. Pages 483-558 in G. Wedemeyer, editor. Fish Hatchery Management, 2nd edition. John Wiley & Sons, Inc., New York, NY. Barrows, F. T., D. A. J. Stone, and R. W. Hardy. 2007. The effects of extrusion conditions on the nutritional value of soybean meal for Rainbow Trout (Oncorhynchus mykiss). Aquaculture 265(1):244-252. Batal, A. B., M. W. Douglas, A. E. Engram, and C. M. Parsons. 2000. Protein dispersibility index as an indicator of adequately processed soybean meal. Poultry Science 79(11):1592-1596. Bavcevic, L. and 4 coauthors. 2010. Compensatory growth in Gilthead Sea Bream (Sparus aurata) compensates weight, but not length. Aquaculture 301(1):57-63. Bergheim, A., A. Drengstig, Y. Ulgenes, and S. Fivelstad. 2009. Production of Atlantic Salmon smolts in Europe-Current characteristics and future trends. Aquacultural Engineering 41(2):46-52. Bhatti, T., R. E. Chambers, and J. R. Clamp. 1970. The gas chromatographic properties of biologically important N-acetylglucosamine derivatives, monosaccharides, 116 disaccharides, trisaccharides, tetrasaccharides and pentasaccharides. Biochimica et Biophysica Acta (BBA)-General Subjects 222(2):339-347. Björck, I., N.-G. Asp, D. Birkhed, and I. Lundquist. 1984. Effects of processing on availability of starch for digestion in vitro and in vivo; I Extrusion cooking of wheat flours and starch. Journal of Cereal Science 2(2):91-103. Black, E. C., F. E. J. Fry, and V. S. Black. 1954. The influence of carbon dioxide on the utilization of oxygen by some fresh-water fish. Canadian Journal of Zoology 32(6):408-420. Blackman, S. A., R. L. Obendorf, and A. C. Leopold. 1992. Maturation proteins and sugars in desiccation tolerance of developing soybean seeds. Plant Physiology 100(1):225-230. Booth, M. A., G. L. Allan, J. Frances, and S. Parkinson. 2001. Replacement of fish meal in diets for Australian Silver Perch, Bidyanus bidyanus: IV. Effects of dehulling and protein concentration on digestibility of grain legumes. Aquaculture 196(12):67-85. Bowser, P. R. 2009. Fish diseases: viral hemorrhagic septicemia (VHS). Northern Regional Aquaculture Publication 201-2009. College Park, Maryland. Boyd, C. E. 2003. Guidelines for aquaculture effluent management at the farm-level. Aquaculture 226(1-4):101-112. Brown, M. L., and K. A. Smith. 2004. Temperature-dependent growth models for South Dakota Yellow Perch, Perca flavescens, fingerling production. Journal of Applied Aquaculture 16(1-2):105-112. 117 Brown, P. B. 2008. Utilization of soy products in diets of freshwater fishes. Pages 225260 in C. Lim, C. D. Webster, and C. Lee, editors. Alternative protein sources in aquaculture diets. Haworth Press, New York. Brown, P. B., K. Dabrowski, and D. L. Garling. 1996. Nutrition and feeding of Yellow Perch (Perca flavescens). Journal of Applied Ichthyology 12(3-4):171-174. Brown, P. B., and S. D. Hart. 2010. Soybean oil and other n-6 polyunsaturated fatty acidrich vegetable oils. Fish oil replacement and alternative lipid sources in aquaculture feeds. CRC Press, Boca Raton, FL:133-160. Buckle, K. 1985. Reduction in phytic acid levels in soybeans during tempeh production, storage and frying. Journal of food Science 50(1):260-263. Burden, D. 2013. Yellow Perch. USDA Ag Marketing Resource Center. Available: http://www.agmrc.org/commodities__products/aquaculture/yellow_perch.cfm (August, 2014). Bureau, D. P., A. M. Harris, and C. Young Cho. 1998. The effects of purified alcohol extracts from soy products on feed intake and growth of Chinook Salmon (Oncorhynchus tshawytscha) and Rainbow Trout (Oncorhynchus mykiss). Aquaculture 161(1-4):27-43. Burel, C., T. Boujard, F. Tulli, and S. J. Kaushik. 2000a. Digestibility of extruded peas, extruded lupin, and rapeseed meal in Rainbow Trout (Oncorhynchus mykiss) and Turbot (Psetta maxima). Aquaculture 188(3-4):285-298. Burel, C., T. Boujard, F. Tulli, and S. J. Kaushik. 2000b. Digestibility of extruded peas, extruded lupin, and rapeseed meal in Rainbow Trout (Oncorhynchus mykiss) and Turbot (Psetta maxima). Aquaculture 188(3):285-298. 118 Cain, K. D., and D. L. Garling. 1995. Pretreatment of soybean meal with phytase for salmonid diets to reduce phosphorus concentrations in hatchery effluents. The Progressive Fish-Culturist 57(2):114-119. Carlson, A. R., J. Blocher, and L. J. Herman. 1980. Growth and survival of channel catfish and yellow perch exposed to lowered constant and diurnally fluctuating dissolved oxygen concentrations. The Progressive Fish-Culturist 42(2):73-78. Chen, C. C., Y. C. Shih, P. W. S. Chiou, and B. Yu. 2010. Evaluating nutritional quality of single stage- and two stage-fermented soybean meal. Asian-Australasian Journal of Animal Science 23(5):598-606. Chen, L., and 4 coauthors. 2013. Value added products from soybean: Removal of antinutritional factors via bioprocessing. Pages 161-179 in HA El-Shemy, editor. Soybean: Bio-Active Compounds. InTech, Rijeka, Croatia. Choct, M., Y. Dersjant-Li, J. McLeish, and M. Peisker. 2010. Soy oligosaccharides and soluble non-starch polysaccharides: A review of digestion, nutritive and antinutritive effects in pigs and poultry. Asian-Australasian Journal of Animal Sciences 23(10):1386-1398. Churms, S. C., G. Zweig, and J. Sherma. 1982. CRC handbook of chromatography. CRC Press. Boca Raton, Florida. Colt, J., and B. Watten. 1988. Applications of pure oxygen in fish culture. Aquacultural Engineering 7(6):397-441. Craig, S. R., B. S. Washburn, and D. M. Galtlin III. 1999. Effects of dietary lipids on body composition and liver function in juvenile Red Drum, Sciaenops ocellatus. Fish Physiology and Biochemistry 21:249-255. 119 Cripps, S. J., and A. Bergheim. 2000. Solids management and removal for intensive landbased aquaculture production systems. Aquacultural Engineering 22(1-2):33-56. Cromwell, G. L., K. L. Herkelman, and T. S. Stahly. 1993. Physical, chemical, and nutritional characteristics of distillers dried grains with solubles for chicks and pigs. Journal of Animal Science 71(3):679-86. Dabrowski, K., P. Poczyczynski, G. Kock, and B. Berger. 1989. Effect of partially or totally replacing fish meal protein by soybean meal protein on growth, food utilization and proteolytic enzyme activities in Rainbow Trout (Salmo gairdneri). New in vivo test for exocrine pancreatic secretion. Aquaculture 77(1):29-49. de la Higuera, M., and 5 coauthors. 1988. Evaluation of lupin seed meal as an alternative protein source in feeding of rainbow trout (Salmo gairdneri). Aquaculture 71(12):37-50. Delwiche, J., R. Liggett, and G. Wallat. 2006. Consumer perception of cultured Yellow Perch (Perca flavescens) and its market competitors. Journal of food Science 71(8):S579-S582. Dersjant-Li, Y. 2002. The use of soy protein in aquafeeds. L. E. Cruz-Suárez, D. RicqueMarie, M. Tapia-Salazar, M. G. Gaxiola-Cortés, and N. Simoes, editors. Avances en Nutrición Acuícola VI. Memorias del VI Simposium Internacional de Nutrición Acuícola. 3 al 6 de Septiembre del 2002., Cancún, Quintana Roo, México. Dhurandhar, N., and K. Chang. 1990. Effect of cooking on firmness, trypsin inhibitors, lectins and cystine/cysteine content of navy and red kidney beans (Phaseolus vulgaris). Journal of food Science 55(2):470-474. 120 Drew, M. D., T. L. Borgeson, and D. L. Thiessen. 2007. A review of processing of feed ingredients to enhance diet digestibility in finfish. Animal Feed Science and Technology 138(2):118-136. Dust, J. M., and 4 coauthors. 2004. Extrusion conditions affect chemical composition and in vitro digestion of select food ingredients. Journal of Agricultural and Food Chemistry 52(10):2989-2996. Enneking, D., and M. Wink. 2000. Towards the elimination of antinutritional factors in grain legumes. Pages 375-384 in R. Knight, editor. Linking Research and Marketing Opportunities for Pulses in the 21st Century. Current Plant Science and Biotechnology in Agriculture, Volume 34. Kluwer Academic Publishers, Dordrecht/Boston/London. Ergul, T., and 5 coauthors. 2003. Amino acid digestibility in corn distillers dried grains with solubles. Poultry Science 82(S 1):70. EU Regulations. 2009. Laying down health rules as regards animal by-products and derived products not intended for human consumption and repealing regulation. O. J. o. t. E. Union, editor Regulation (EC) No 1069/2009 of the European Parliament and of the council. Fallahi, P., K. A. Rosentrater, K. Muthukumarappan, and M. L. Brown. 2014. Characteristics of vegetable-based twin-screw extruded Yellow Perch (Perca flavescens) diets containing fermented high-protein soybean meal and graded levels of distillers dried grains with solubles. Cereal Chemistry 91(1):79-87. Food and Agriculture Organization (FAO). 2009. Impact of Rising Feed Ingredient Prices on Aquafeeds and Aquaculture Production. United Nations, Rome, Italy. 121 Food and Agriculture Organization (FAO). 2012a. The State of World Fisheries and Aquaculture. United Nations, Rome, Italy. Food and Agriculture Organization (FAO). 2012b. Common Database. Available: http://www.fao.org/fishery/statistics/collections/en (June, 2014). Food and Agriculture Organization (FAO). 2014. The State of World Fisheries and Aquaculture. United Nations, Rome, Italy. Fastinger, N., J. Latshaw, and D. Mahan. 2006. Amino acid availability and true metabolizable energy content of corn distillers dried grains with solubles in adult cecectomized roosters. Poultry Science 85(7):1212-1216. Fastinger, N., and D. Mahan. 2006. Determination of the ileal amino acid and energy digestibilities of corn distillers dried grains with solubles using grower-finisher pigs. Journal of Animal Science 84(7):1722-1728. Fenwick, G., K. Price, C. Tsukamoto, and K. Okubo. 1991. Saponins. Pages 285-327 in J. D'Mello, C. Duffus, and J. Duffus, editors. Toxic Substances in Crop Plants, The Royal Society of Chemists, Cambridge, UK. Fischer, S. A., and L. W. Hall Jr. 1989. A synthesis of water quality and contaminants data for Yellow Perch, Perca flavescens. Coastal Zone Information Center. Fontaine, J., U. Zimmer, P. J. Moughan, and S. M. Rutherfurd. 2007. Effect of heat damage in an autoclave on the reactive lysine contents of soy products and corn distillers dried grains with solubles. Use of the results to check on lysine damage in common qualities of these ingredients. Journal of Agricultural and Food Chemistry 55(26):10737-10743. 122 Forster, I. 1999. A note on the method of calculating digestibility coefficients of nutrients provided by single ingredients to feeds of aquatic animals. Aquaculture Nutrition 5(2):143-145. Forster, I. 2002. Use of soybean meal in the diets of non-salmonid marine fish. United Soybean Board and American Soybean Association. Francis, D. S., G. M. Turchini, P. L. Jones, and S. S. De Silva. 2007. Growth performance, feed efficiency and fatty acid composition of juvenile Murray Cod, Maccullochella peelii peelii, fed graded levels of canola and linseed oil. Aquaculture Nutrition 13(5):335-350. Francis, G., H. P. S. Makkar, and K. Becker. 2001. Antinutritional factors present in plant-derived alternate fish feed ingredients and their effects in fish. Aquaculture 199(3-4):197-227. Gallagher, M. L. 1994. The use of soybean meal as a replacement for fish meal in diets for Hybrid Striped Bass (Morone saxatilis x M. chrysops). Aquaculture 126(12):119-127. Gao, Y.-l., C.-s. Wang, Q.-h. Zhu, and G.-y. Qian. 2013. Optimization of solid-state fermentation with Lactobacillus brevis and Aspergillus oryzae for trypsin inhibitor degradation in soybean meal. Journal of Integrative Agriculture 12(5):869-876. Garber, K. J. 1983. Effect of fish size, meal size and dietary moisture on gastric evacuation of pelleted diets by Yellow Perch, Perca flavescens. Aquaculture 34:41-49. 123 Gatlin, D. M. 2002. Use of soybean meal in the diets of omnivorous freshwater fish. Department of Wildlife and Fisheries Sciences. Texas A&M University System. Gatlin, D. M., and 17 coauthors. 2007. Expanding the utilization of sustainable plant products in aquafeeds: a review. Aquaculture Research 38(6):551-579. Gaylord, T. G., F. T. Barrows, and S. D. Rawles. 2008. Apparent digestibility of gross nutrients from feedstuffs in extruded feeds for Rainbow Trout, Oncorhynchus mykiss. Journal of the World Aquaculture Society 39(6):827-834. Glencross, B., J. Curnow, and W. Hawkins. 2003. Evaluation of the variability in chemical composition and digestibility of different lupin (Lupinus angustifolius) kernel meals when fed to Rainbow Trout (Oncorhynchus mykiss). Animal Feed Science and Technology 107(1-4):117-128. Glencross, B., and 6 coauthors. 2005. Evaluation of the digestible value of lupin and soybean protein concentrates and isolates when fed to rainbow trout, Oncorhynchus mykiss, using either stripping or settlement faecal collection methods. Aquaculture 245(1-4):211. Glencross, B., D. Evans, W. Hawkins, and B. Jones. 2004. Evaluation of dietary inclusion of yellow lupin (Lupinus luteus) kernel meal on the growth, feed utilisation and tissue histology of Rainbow Trout (Oncorhynchus mykiss). Aquaculture 235(1-4):411-422. Glencross, B., and coauthors. 2011. A comparison of the effect of diet extrusion or screw-press pelleting on the digestibility of grain protein products when fed to rainbow trout (Oncorhynchus mykiss). Aquaculture 312(1-4):154-161. 124 Glencross, B. D., M. Booth, and G. L. Allan. 2007. A feed is only as good as its ingredients - a review of ingredient evaluation strategies for aquaculture feeds. Aquaculture Nutrition 13(1):17-34. Goihl, J. 1993. Color, odor good indicators of DDGS nutritional value. Feedstuffs 65(21):11. Grigorakis, K. 2007. Compositional and organoleptic quality of farmed and wild gilthead sea bream (Sparus aurata) and sea bass (Dicentrarchus labrax) and factors affecting it: A review. Aquaculture 272(1-4):55-75. Han-Ping, W., and 9 coauthors. 2009. Evaluation of relative growth performance and genotype by environment effects for cross-bred yellow perch families reared in communal ponds using DNA parentage analyses. Aquaculture Research 40(12):1363-1373. Han, Y. W., and A. G. Wilfred. 1988. Hydrolysis of phytate in soybean and cottonseed meals by Aspergillus ficuum phytase. Journal of Agricultural and Food Chemistry 36(2):259-262. Hardy, R. W. 1998. Collaborative opportunities between fish nutrition and other disciplines in aquaculture: an overview. Aquaculture 177(1-4): 217-230. Hart, S. D., and 5 coauthors. 2010. Predicting the optimal dietary essential amino acid profile for growth of juvenile Yellow Perch with whole body amino acid concentrations. Aquaculture Nutrition 16(3):248-253. Hedstrom, L. 2002. Serine protease mechanism and specificity. Chemical Reviews 102(12):4501-4524. 125 Helland, S. J., B. Grisdale-Helland, and S. Nerland. 1996. A simple method for the measurement of daily feed intake of groups of fish in tanks. Aquaculture 139(12):157-163. Hendriks, H. G. C. J. M., T. S. G. A. M. Van den Ingh, A. Krogdahl, J. Olli, and J. F. J. G. Koninkx. 1990. Binding of soybean agglutinin to small intestinal brush border membranes and brush border membrane enzyme activities in Atlantic Salmon (Salmo salar). Aquaculture 91(1-2):163-170. Henken, A. M., D. W. Kleingeld, and P. A. T. Tijssen. 1985. The effect of feeding level on apparent digestibility of dietary dry matter, crude protein and gross energy in the African Catfish Clarias gariepinus (Burchell, 1822). Aquaculture 51(1):1-11. Hertrampf, J. W., and F. Piedad-Pascual. 2003. Handbook on ingredients for aquaculture feeds. Springer-Verlag. Heidelberg, Germany. Higgs, D. A., and coauthors. 1982. Evaluation of tower and candle rapeseed (canola) meal and bronowski rapeseed protein concentrate as protein supplements in practical dry diets for juvenile Chinook Salmon (Oncorhynchus tshawytscha). Aquaculture 29(1-2):1-31. Hong, K. J., C. H. Lee, and S. W. Kim. 2004. Aspergillus oryzae GB-107 fermentation improves nutritional quality of food soybeans and feed soybean meals. Journal of Medicinal Food 7(4):430-5. Horan, F. E. 1974. Soy protein products and their production. Journal of the American Oil Chemists’ Society 51(1):67A-73A. How, J., and C. Morr. 1982. Removal of phenolic compounds from soy protein extracts using activated carbon. Journal of food Science 47(3):933-940. 126 Hung, T. Y., S. Y. Lin, C. K. Lin, S. C. Liu, and J. J. Lu. 2008. Effect of multi-strain microbial fermented soybean meal on growth performance, serum profile and intestinal physiological status of weaned piglets. Livestock Research for Rural Development 20(9) Article #143 Retrieved August 26, 2014, from http://www.lrrd.org/lrrd20/9/hung20143.htm. Ingh, T., J. Olli, and Å. Krogdahl. 1996. Alcohol‐soluble components in soybeans cause morphological changes in the distal intestine of Atlantic Salmon, Salmo salar L. Journal of Fish Diseases 19(1):47-53. Jackson, A. 2012. Fishmeal & fish oil and its role in sustainable aquaculture. International Aquafeed 15(1), 18-21. Jobling, M. 1994. Fish Bioenergetics, volume 13. Chapman & Hall, London. Jobling, M., and coauthors. 2007. Techniques for Measuring Feed Intake. Pages 49-87 in Food Intake in Fish. Blackwell Science Ltd. Osney Mead, Oxford, UK. Karunanithy, C., V. Karuppuchamy, K. Muthukumarappan, and W. R. Gibbons. 2012. Selection of enzyme combination, dose, and temperature for hydrolysis of soybean white flakes. Industrial Biotechnology 8(5):309-317. Karuppuchamy, V. 2011. Sugar recovery from defatted soybean meal, white flakes, and soybean hull using extrusion, microwave, and ultrasound pretreatments. M.S. Thesis. South Dakota State University, Brookings. Kasper, C. S., B. A. Watkins, and P. B. Brown. 2007. Evaluation of two soybean meals fed to Yellow Perch (Perca flavescens). Aquaculture Nutrition 13(6):431-438. Kasumyan, A. O., and K. B. Doving. 2003. Taste preferences in fish. Fish and Fisheries 4:289-347. 127 Kaushik, S. J., and coauthors. 1995. Partial or total replacement of fish meal by soybean protein on growth, protein utilization, potential estrogenic or antigenic effects, cholesterolemia and flesh quality in Rainbow Trout Oncorhynchus mykiss. Aquaculture 133(3-4):257-274. Kaushik, S. J., and F. Médale. 1994. Energy requirements, utilization and dietary supply to salmonids. Aquaculture 124(1-4):81-97. Kaushik, S. J., and I. Seiliez. 2010. Protein and amino acid nutrition and metabolism in fish: current knowledge and future needs. Aquaculture Research 41(3):322-332. Kim, J. D., and S. J. Kaushik. 1992. Contribution of digestible energy from carbohydrates and estimation of protein/energy requirements for growth of Rainbow Trout (Oncorhynchus mykiss). Aquaculture 106(2):161-169. Kim, J.-E., K. Hwang, and S.-P. Lee. 2010. ACE inhibitory and hydrolytic enzyme activities in textured vegetable protein in relation to the solid state fermentation period using Bacillus subtilis HA. Food Science and Biotechnology 19(2):487495. Kitchell, J. F., D. J. Stewart, and D. Weininger. 1977. Applications of a bioenergetics model to Yellow Perch (Perca flavescens) and Walleye (Stizostedion vitreum). Journal of the Fisheries Board of Canada 34(10):1922-1935. Kleiber, M. 1961. The Fire of Life: an Introduction to Animal Energetics. John Wiley & Sons, New York & London. Klurfeld, D. M., and D. Kritchevsky. 1987. Isolation and quantitation of lectins from vegetable oils. Lipids 22(9):667-668. 128 Knight, R. L., F. J. Margraf, and R. F. Carline. 1984. Piscivory by walleyes and yellow perch in western Lake Erie. Transactions of the American Fisheries Society 113(6):677-693. Kolar, C., I. Cho, and W. Watrous. 1979. Vegetable protein application in yogurt, coffee creamers and whip toppings. Journal of the American Oil Chemists’ Society 56(3):389-391. Krogdahl, M. Bakke, Roed, and Baeverfjord. 2000. Feeding Atlantic Salmon Salmo salar L. soybean products: effects on disease resistance (furunculosis), and lysozyme and IgM levels in the intestinal mucosa. Aquaculture Nutrition 6(2):77-84. Krogdahl, A., G. I. Hemre, and T. P. Mommsen. 2005. Carbohydrates in fish nutrition: digestion and absorption in postlarval stages. Aquaculture Nutrition 11(2):103122. Krogdahl, A., A. Roem, and G. Baeverfjord. 1995. Effects of soybean saponine, raffinose and soybean alcohol extract on nutrient digestibilities, growth and intestinal morphology in Atlantic salmon. Pages 118-119 in Quality in Aquaculture. Proceedings of the International Conference of Aquaculture. Krogdahl, A., A. Sundby, and J. J. Olli. 2004. Atlantic Salmon (Salmo salar) and Rainbow Trout (Oncorhynchus mykiss) digest and metabolize nutrients differently. Effects of water salinity and dietary starch level. Aquaculture 229(14):335-360. Lajolo, F. M., and M. I. Genovese. 2002. Nutritional significance of lectins and enzyme inhibitors from legumes. Journal of Agriculture and Food Chemistry 50:65929598. 129 Law, A. T. 1986. Digestibility of low-cost ingredients in pelleted feed by grass carp (Ctenopharyngodon idella C. et V.). Aquaculture 51(2):97-103. Li, L., H. Wang, C. Givens, S. Czesny, and B. Brown. 2007. Isolation and characterization of microsatellites in Yellow Perch (Perca flavescens). Molecular Ecology Notes 7(4):600-603. Liener, I. E. 1994. Implications of antinutritional components in soybean foods. Critical Reviews in Food Science & Nutrition 34(1):31-67. Liener, I. E., and M. L. Kakade. 1980. Protease inhibitors. Pages 7-71 in I. E. Liener, editor. Toxic constituents of plant food stuffs. Academic Press, New York. Loosli, J. K., and I. W. McDonald. 1968. Nonprotein nitrogen in the nutrition of ruminants. Food and Agriculture Organization of the United Nations, Rome, Italy. Lusas, E. W., and M. N. Riaz. 1995. Soy protein products: processing and use. Journal of Nutrition 125(3 S):573S-580S. Malison, J., and M. Garcia‐Abiado. 1996. Sex control and ploidy manipulations in Yellow Perch (Perca flavescens) and Walleye (Stizostedion vitreum). Journal of Applied Ichthyology 12(3‐4):189-194. Malison, J. A. 2003. A white paper on the status and needs of Yellow Perch Aquaculture in the North Central Region. Mathis, N., C. Feidt, and J. Brun-Bellut. 2003. Influence of protein/energy ratio on carcass quality during the growing period of Eurasian Perch (Perca fluviatilis). Aquaculture 217(1-4):453-464. 130 Matsui, T., M. Hirabayashi, Y. Iwama, T. Nakajima, F. Yano, H. Yano. 1996. Fermentation of soya-bean meal with Aspergillus usami improves phosphorus availability in chicks. Animal Feed Science and Technology 60(1):131-136. McCormick, J. H., K. M. Jensen, and R. L. Leino. 1989. Survival, blood osmolality, and gill morphology of juvenile Yellow Perch, Rock Bass, Black Crappie, and Largemouth Bass exposed to acidified soft water. Transactions of the American Fisheries Society 118(4):386-399. Mienda, B. S., A. Idi, and A. Umar. 2011. Microbiological features of solid state fermentation and its applications-an overview. Research in Biotechnology 2(6):21-26. Mjoun, K., K. A. Rosentrater, and M. L. Brown. 2012. Culture performance and tissue fatty acid compositions of Yellow Perch (Perca flavescens) fed different dietary lipids. Aquaculture 360-361:17-24. Montero, D., and coauthors. 2008. Total substitution of fish oil by vegetable oils in Gilthead Sea Bream (Sparus aurata) diets: Effects on hepatic Mx expression and some immune parameters. Fish & Shellfish Immunology 24(2):147-155. Muller, S., and R. Schweiger. 1973. Process for extracting full fat soybean flakes or meal. Google Patents. Naylor, R. L., and 9 coauthors. 2000. Effect of aquaculture on world fish supplies. Nature 405(30):1017-1024. Ng, W.-K., Y. Wang, P. Ketchimenin, and K.-H. Yuen. 2004. Replacement of dietary fish oil with palm fatty acid distillate elevates tocopherol and tocotrienol 131 concentrations and increases oxidative stability in the muscle of African Catfish, Clarias gariepinus. Aquaculture 233(1-4):423-437. National Oceanic and Atmospheric Administration (NOAA). 2013. Imports and Exports of Fishery Products Annual Summary. Norton, G. 1991. Proteinase inhibitors. Pages 68-106 in J. P. F. D'Mello, and C. M. Duffus, editors. Toxic Substances in Crop Plants. The Royal Society of Chemistry. Cambridge, UK. National Research Council (NRC). 2011. Nutrient Requirements of Fish and Shrimp. The National Academies Press, Washington D.C. Obaldo, L. G., S. Divakaran, and A. G. Tacon. 2002. Method for determining the physical stability of shrimp feeds in water. Aquaculture Research 33(5):369-377. Olli, J. J., K. Hjelmeland, and Å. Krogdahl. 1994a. Soybean trypsin inhibitors in diets for Atlantic Salmon (Salmo salar, L): effects on nutrient digestibilities and trypsin in pyloric caeca homogenate and intestinal content. Comparative Biochemistry and Physiology Part A: Physiology 109(4):923-928. Olli, J. J., Å. Krogdahl, T. S. van den Ingh, and L. E. Brattås. 1994b. Nutritive value of four soybean products in diets for Atlantic Salmon (Salmo salar, L.). Acta Agriculturae Scandinavica, Section A-Animal Science 44(1):50-60. Osagie, A. U., and O. U. Eka. 1998. Nutritional quality of plant foods. University of Benin. Öste, R., and P. Sjödin. 1984. Effect of Maillard Reaction Products on Protein Digestion. In Vivo Studies on Rats. Journal of Nutrition 114(12):2228-2234. 132 Pandey, A., C. R. Soccol, and D. Mitchell. 2000. New developments in solid state fermentation: I-bioprocesses and products. Process Biochemistry 35(10):11531169. Parsons, C. M., Y. Zhang, and M. Araba. 2000. Nutritional evaluation of soybean meals varying in oligosaccharide content. Poultry Science 79(8):1127-1131. Peace, R., G. Sarwar, and S. Touchburn. 1992. Trypsin inhibitor levels in soy-based infant formulas and commercial soy protein isolates and concentrates. Food Research International 25(2):137-141. Peisker, M. 2001. Manufacturing of soy protein concentrate for animal nutrition. Cahiers Options Mediterraneennes 54:103-107. Pesti, G. M., and A. F. Seila. 1999. The use of an electronic spreadsheet to solve linear and non-linear “stochastic" feed formulation problems. Journal of Applied Poultry Research 8:110-121. Petit, G. D. 1973. Effects of dissolved oxygen on survival and behavior of selected fishes of western Lake Erie. Bulletin of the Ohio Biological Survey, volume 4, number 4. Ohio State University, Columbus. Petrell, R. J., and K. P. Ang. 2001. Effects of pellet contrast and light intensity on salmonid feeding behaviours. Aquacultural Engineering 25(3):175-186. Piper, R. G. 1986. Fish hatchery management. United States Department of the Interior, Fish and Wildlife Service. Washington D.C. Post, J. R. 1990. Metabolic allometry of larval and juvenile Yellow Perch (Perca flavescens): in situ estimates and bioenergetic models. Canadian Journal of Fisheries and Aquatic Sciences 47(3):554-560. 133 Poston, H. A. 1990a. Effect of body size on growth, survival, and chemical composition of Atlantic Salmon fed soy lecithin and choline. The Progressive Fish-Culturist 52(4):226-230. Poston, H. A. 1990b. Performance of Rainbow Trout fry fed supplemental soy lecithin and choline. The Progressive Fish-Culturist 52(4):218-225. Rackis, J. J., M. Gumbmann, and I. Liener. 1985. The USDA trypsin inhibitor study. I. Background, objectives, and procedural details. Plant Foods for Human Nutrition 35(3):213-242. Ramseyer, L. J., and D. L. Garling. 1998. Effects of dietary protein to metabolizable energy ratios and total protein concentrations on the performance of Yellow Perch Perca flavescens. Aquaculture Nutrition 4(4):217-223. Rawles, S. D., and coauthors. 2010. A comparison of two faecal collection methods for protein and amino acid digestibility coefficients of menhaden fish meal and two grades of poultry by-product meals for market-size Sunshine Bass ( Morone chrysops × M. saxatilis). Aquaculture Nutrition 16(1):81-90. Rawlings, N. D., D. P. Tolle, and A. J. Barrett. 2004. Evolutionary families of peptidase inhibitors. Biochemical Journal 378:705-716. Rebello, C., and K. Schaich. 1999. Extrusion chemistry of wheat flour proteins: II. Sulfhydryl-disulfide content and protein structural changes. Cereal Chemistry 76(5):756-763. Refstie, S., S. J. Helland, and T. Storebakken. 1997. Adaptation to soybean meal in diets for Rainbow Trout, Oncorhynchus mykiss. Aquaculture 153(3-4):263-272. 134 Refstie, S., S. Sahlstrom, E. Brathen, G. Baeverfjord, and P. Krogedal. 2005. Lactic acid fermentation eliminates indigestible carbohydrates and antinutritional factors in soybean meal for Atlantic Salmon (Salmo salar). Aquaculture 246(1-4):331. Refstie, S., T. Storebakken, and A. J. Roem. 1998. Feed consumption and conversion in Atlantic Salmon (Salmo salar) fed diets with fish meal, extracted soybean meal or soybean meal with reduced content of oligosaccharides, trypsin inhibitors, lectins and soya antigens. Aquaculture 162(3-4):301-312. Refstie, S., B. Svihus, K. D. Shearer, and T. Storebakken. 1999. Nutrient digestibility in Atlantic Salmon and broiler chickens related to viscosity and non-starch polysaccharide content in different soyabean products. Animal Feed Science and Technology 79(4):331-345. Richardson, N. L., D. A. Higgs, R. M. Beames, and J. R. McBride. 1985. Influence of dietary calcium, phosphorus, zinc and sodium phytate level on cataract incidence, growth and histopathology in juvenile Chinook Salmon (Oncorhynchus tshawytscha). Journal of Nutrition 115(5):553-567. Riche, M., and P. B. Brown. 1996. Availability of phosphorus from feedstuffs fed to Rainbow Trout, Oncorhynchus mykiss. Aquaculture 142(3-4):269-282. Ritter, M., C. Morr, and R. Thomas. 1987. In vitro digestibility of phytate‐reduced and phenolics‐reduced soy protein isolates. Journal of food Science 52(2):325-327. Romarheim, O. H., and coauthors. 2006. Comparison of white flakes and toasted soybean meal partly replacing fish meal as protein source in extruded feed for Rainbow Trout (Oncorhynchus mykiss). Aquaculture 256(1-4):354-364. 135 Rombenso, A., C. Crouse, and J. Trushenski. 2013. Comparison of traditional and fermented soybean meals as alternatives to fish meal in Hybrid Striped Bass feeds. North American Journal of Aquaculture 75(2):197-204. Rowland, S. J., and coauthors. 2005. Development of a feeding strategy for Silver Perch, Bidyanus bidyanus (Mitchell), based on restricted rations. Aquaculture Research 36(14):1429-1441. Rumsey, G. L. 1993. Fish meal and alternate sources of protein in fish feeds update. Fisheries 18(7):14-19. Ruscoe, I. M., C. M. Jones, P. L. Jones, and P. Caley. 2005. The effects of various binders and moisture content on pellet stability of research diets for freshwater crayfish. Aquaculture Nutrition 11(2):87-93. Sales, J. 2009. The effect of fish meal replacement by soyabean products on fish growth: a meta-analysis, volume 102. Sandholm, M., R. R. Smith, J. C. Shih, and M. L. Scott. 1976. Determination of antitrypsin activity on agar plates: relationship between antitrypsin and biological value of soybean for trout. J Nutr 106(6):761-6. Schaeffer, T. W., D. E. Spengler, C. W. Schoenebeck, M. L. Brown, and S. R. Chipps. 2012. Effect of feeding–fasting cycles on oxygen consumption and bioenergetics of female Yellow Perch. Transactions of the American Fisheries Society 141(6):1480-1491. Shaw, J., L. Moore, and J. Sykes. 1951. The effect of raw soybeans on blood plasma carotene and vitamin A and liver vitamin A of calves. Journal of Dairy Science 34(3):176-180. 136 Shewry, P. R., N. G. Halford, P. S. Belton, and A. S. Tatham. 2002. The structure and properties of gluten: an elastic protein from wheat grain. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences 357(1418):133-142. Shiau, S. Y., and H. S. Liang. 1995. Carbohydrate utilization and digestibility by Tilapia, Oreochromis niloticus x O. aureus, are affected by chromic oxide inclusion in the diet. Journal of Nutrition 125(4):976-982. Shimoyamada, M., S. Ikedo, R. Ootsubo, and K. Watanabe. 1998. Effects of soybean saponins on chymotryptic hydrolyses of soybean proteins. Journal of Agricultural and Food Chemistry 46(12):4793-4797. Simopoulous, A. P. 2002. Omega-3 fatty acids in wild plants, nuts and seeds. Asia Pacific Journal of Clinical Nutrition 11(S6):S163-S173. Singh, P., R. Kumar, S. N. Sabapathy, and A. S. Bawa. 2008. Functional and edible uses of soy protein products. Comprehensive Reviews in Food Science and Food Safety 7(1):14-28. Sinha, A. K., V. Kumar, H. P. S. Makkar, G. De Boeck, and K. Becker. 2011. Non-starch polysaccharides and their role in fish nutrition – A review. Food Chemistry 127(4):1409-1426. Skrede, G., and coauthors. 2002. Lactic acid fermentation of wheat and barley whole meal flours improves digestibility of nutrients and energy in Atlantic Salmon (Salmo salar L.) diets. Aquaculture 210(1-4):305-321. 137 Slominski, B. A., L. D. Campbell, and W. Guenter. 1994. Oligosaccharides in canola meal and their effect on nonstarch polysaccharide digestibility and true metabolizable energy in poultry. Poultry Science 73(1):156-62. Song, Y. S., J. Frias, C. Martinez-Villaluenga, C. Vidal-Valdeverde, and E. G. de Mejia. 2008. Immunoreactivity reduction of soybean meal by fermentation, effect on amino acid composition and antigenicity of commercial soy products. Food Chemistry 108(2):571-581. Stickney, R. R. 1979. Principles of warmwater aquaculture. John Wiley & Sons. Stone, D. A. J., G. L. Allan, and A. J. Anderson. 2003. Carbohydrate utilization by juvenile Silver Perch Bidyanus bidyanus (Mitchell). III. The protein-sparing effect of wheat starch-based carbohydrates. Aquaculture Research 34(2):123-134. Stone, D. A. J., R. W. Hardy, F. T. Barrows, and Z. J. Cheng. 2005. Effects of extrusion on nutritional value of diets containing corn gluten meal and corn distiller's dried grain for Rainbow Trout, Oncorhynchus mykiss. Journal of Applied Aquaculture 17(3):1-20. Storebakken, T., and coauthors. 1998a. The apparent digestibility of diets containing fish meal, soybean meal or bacterial meal fed to Atlantic Salmon (Salmo salar): evaluation of different faecal collection methods. Aquaculture 169(3-4):195-210. Storebakken, T., S. Refstie, and B. Ruyter. 2000. Soy products as fat and protein sources in fish feeds for intensive aquaculture. Pages 127-170 in J. Drackley, editor. Soy in Animal Nutrition. Federation of Animal Science Societies, Savoy, IL. Storebakken, T., K. D. Shearer, and A. J. Roem. 1998b. Availability of protein, phosphorus and other elements in fish meal, soy-protein concentrate and phytase- 138 treated soy-protein-concentrate-based diets to Atlantic Salmon, Salmo salar. Aquaculture 161(1-4):365-379. Subramaniyam, R., and R. Vimala. 2012. Solid state and submerged fermentation for the production of bioactive substances: a comparative study. International Journal of Science and Nature 3(3):480-486. Summerfelt, S. T. 2003. Ozonation and UV irradiation - an introduction and examples of current applications. Aquacultural Engineering 28:21-36. Summerfelt, S. T., B. Vinci, and R. Piedrahita. 2000. Oxygenation and carbon dioxide control in water reuse systems. Aquacultural Engineering 22(1):87-108. Swick, R. A. 1994. Latest trends in aqua nutrition and aqua feed formulation: use of soybean meal and synthetic methionine in shrimp feed. 35th compound and livestock feed manufactures' association of India nation symposium Aquaculture: the new horizon. Swick, R. A. 2007. Selecting soy protein for animal feed. 15th Annual ASAIM Southeast Asian feed technology and nutrition workshop, Conrad Bali Resort, Indonesia. Tacon, A. G. J., and A. J. Jackson. 1985. Utilization of conventional and unconventioanl protein sources in practical fish feeds. Pages 131-142 in M. A. M. Cowey, and J. G. Bell, editors. Nutrition and Feeding in Fish. Academic Press, London. Tacon, A. G. J., and M. Metian. 2008. Global overview on the use of fish meal and fish oil in industrially compounded aquafeeds: Trends and future prospects. Aquaculture 285(1-4):146-158. Taylor, L. N., C. M. Wood, and D. G. McDonald. 2003. An evaluation of sodium loss and gill metal binding properties in Rainbow Trout and Yellow Perch to explain 139 species differences in copper tolerance. Environmental Toxicology and Chemistry 22(9):2159-2166. Terjesen, B. F., and coauthors. 2013. Design, dimensioning, and performance of a research facility for studies on the requirements of fish in RAS environments. Aquacultural Engineering 54:49-63. Thomas, M., and A. F. B. v. d. Poel. 2001. Functional properties of diet ingredients: manufacturing and nutritional implications. Pages 109-122 in A. F. B. van der Poel, J. L. Vahl, and R. P. Lwakkel, editors. Advances in nutritional technology 2001, Proceedings of the 1st world feed conference (7-8 November 2001). Wageningen, Utrecht, Netherlands. Thomas, M. V., and R. C. Haas. 2000. Status of Yellow Perch and Walleye populations in Michigan waters of Lake Erie, 1994-98. Department of Natural Resources, Fisheries Division. Thurston, R. V., R. C. Russo, and G. A. Vinogradov. 1981. Ammonia toxicity to fishes. Effect of pH on the toxicity of the unionized ammonia species. Environmental Science & Technology 15(7):837-840. Tidwell, J. H., and coauthors. 1999. Effect of culture temperature on growth, survival, and biochemical composition of Yellow Perch Perca flavescens. Journal of the World Aquaculture Society 30(3):324-330. Timmons, M. B., and J. M. Ebeling. 2007. Recirculating Aquaculture. Cayuga Aqua Ventures. 140 Timmons, M. B., and S. T. Summerfelt. 2007. Culture Units. Pages 115-170 in M. B. Timmons, and J. M. Ebeling, editors. Recirculating Aquaculture, Cayuga Aqua Ventures, Ithaca, NY. Trushenski, J. T., A. N. Rombenso, M. Page, D. Jirsa, and M. Drawbridge. 2014. Traditional and fermented soybean meals as ingredients in feeds for White Seabass and Yellowtail Jack. North American Journal of Aquaculture 76(4):312322. Twibell, R. G., and P. B. Brown. 2000. Dietary choline requirement of juvenile Yellow Perch (Perca flavescens). J Nutr 130(1):95-99. Undersander, D., D. R. Mertens, and N. J. Thiex. 1993. Forage analyses procedures. National Forage Testing Association. Omaha, Nebraska. UrÁN, P. A., and coauthors. 2008. Soybean meal-induced enteritis in Atlantic Salmon (Salmo salar L.) at different temperatures. Aquaculture Nutrition 14(4):324-330. United States Department of Agriculture (USDA). 2014. Production, Supply and Distribution Online. Available: https://apps.fas.usda.gov/psdonline/ (August, 2014). United States Department of Agriculture (USDA). 2007. Census of Agriculture. Available: http://www.agcensus.usda.gov/Publications/2007/ (August, 2014). United States Department of Agriculture- National Agriculture Statistics Service (USDANASS). 2006. Census of aquaculture (2005), Volume 3, Special Studies Part 2, AC-02-SP-2. United States Soybean Export Council (USSEC). 2008. Soy protein concentrate for aquaculture feeds, technical bulletin. 141 van den Ingh, T. S. G. A. M., A. Krogdahl, J. J. Olli, H. G. C. J. M. Hendriks, and J. G. J. F. Koninkx. 1991. Effects of soybean-containing diets on the proximal and distal intestine in Atlantic Salmon (Salmo salar): a morphological study. Aquaculture 94(4):297-305. Van der Poel, A. F. B. 1989. Effects of processing on antinutritional factors (ANF) and nutritional value of legume seeds for non-ruminant feeding. J. Huisman, T. F. B. Van der Poel, and I. E. Liener, editors. Recent Advances of Research in Antinutritional Factors in Legume Seeds. Pudoc Wageningen, The Netherlands. Vandenberg, G. W., and J. De La Noüe. 2001. Apparent digestibility comparison in Rainbow Trout (Oncorhynchus mykiss) assessed using three methods of faeces collection and three digestibility markers. Aquaculture Nutrition 7(4):237-245. Viola, S., S. Mokady, and Y. Arieli. 1983. Effects of soybean processing methods on the growth of carp (Cyprinus carpio). Aquaculture 32(1-2):27-38. Webster, C. D., J. H. Tidwell, and D. H. Yancey. 1991. Evaluation of distillers' grains with solubles as a protein source in diets for Channel Catfish. Aquaculture 96(2):179-190. Wolf, W. J. 1970. Soybean proteins. Their functional, chemical, and physical properties. Journal of Agricultural and Food Chemistry 18(6):969-976. World Bank. 2014. Global economic monitor. Available: http://data.worldbank.org/datacatalog/global-economic-monitor (July, 2014). Wright, P. A. 1995. Nitrogen excretion: three end products, many physiological roles. The Journal of Experimental Biology 198(2):273-281. 142 Yackey, C. R. 1998. Improving acceptance, efficiency, and quality of formulated feeds for juvenile Yellow Perch (Perca flavescens). M.S. Thesis. Ohio State University. Yamamoto, T., and coauthors. 2008. Effect of an alcohol extract from a defatted soybean meal supplemented with a casein-based semi-purified diet on the biliary bile status and intestinal conditions in Rainbow Trout Oncorhynchus mykiss (Walbaum). Aquaculture Research 39(9):986-994. Yamamoto, T., and coauthors. 2010. Influence of fermentation conditions for soybean meal in a non-fish meal diet on the growth performance and physiological condition of Rainbow Trout Oncorhynchus mykiss. Aquaculture 309(1-4):173180. Zdunczyk, Z., J. Jankowski, J. Juskiewicz, and B. A. Slominsk. 2011. Dietary content and gastrointestinal function of soybean oligosaccharides in monogastric animals. Pages 523-540 in T.-B. Ng, editor. Soybean - Biochemistry, Chemistry and Physiology. IntechOpen, Rijeka, Croatia.
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