Protein Kinase A Type I and Type II Define Distinct Intracellular Signaling Compartments Giulietta Di Benedetto, Anna Zoccarato, Valentina Lissandron, Anna Terrin, Xiang Li, Miles D. Houslay, George S. Baillie, Manuela Zaccolo Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 Abstract—Protein kinase A (PKA) is a key regulatory enzyme that, on activation by cAMP, modulates a wide variety of cellular functions. PKA isoforms type I and type II possess different structural features and biochemical characteristics, resulting in nonredundant function. However, how different PKA isoforms expressed in the same cell manage to perform distinct functions on activation by the same soluble intracellular messenger, cAMP, remains to be established. Here, we provide a mechanism for the different function of PKA isoforms subsets in cardiac myocytes and demonstrate that PKA-RI and PKA-RII, by binding to AKAPs (A kinase anchoring proteins), are tethered to different subcellular locales, thus defining distinct intracellular signaling compartments. Within such compartments, PKA-RI and PKA-RII respond to distinct, spatially restricted cAMP signals generated in response to specific G protein– coupled receptor agonists and regulated by unique subsets of the cAMP degrading phosphodiesterases. The selective activation of individual PKA isoforms thus leads to phosphorylation of unique subsets of downstream targets. (Circ Res. 2008;103:836-844.) Key Words: cAMP 䡲 compartmentalization 䡲 compartmentation 䡲 adrenergic stimulation 䡲 prostaglandin 䡲 protein kinase A P coupled to specific GPCRs to degrade cAMP selectively in response to a given stimulus.8 Cardiac myocytes express all four types of PKA isozymes, PKA-RI␣, PKA-RII␣, PKA-RI, and PKA-RII.9 PKA isoforms show different subcellular localization, with PKA-RII being mainly associated with the particulate fraction of cell lysates whereas PKA-RI has been found preferentially in the cytosol.10,11 PKA isoforms also show different biochemical properties. PKA-RI is more readily dissociated by cAMP than PKA-RII,12,13 and the recent structure solution of holoenzyme complexes14,15 shows critical isoform-specific features that specifically regulate inhibition and cAMP-induced activation of PKA-RI and PKA-RII. Given the distinct biochemical properties and the specific subcellular localization of PKA isozymes, it is not surprising that the biological role of PKA-RI and PKA-RII is nonredundant, as demonstrated by genetic and biochemical studies (reviewed elsewhere16). However, how individual PKA isoforms serve to deliver a specific response remains unknown. In particular, it remains to be established how spatial control of the cAMP signal and activation of individual PKA isoforms are coordinated to perform a specific biological function. Here, we set out to answer the question of whether confined pools of cAMP elicited in response of specific extracellular stimuli selectively activate individual PKA iso- rotein kinase A (PKA) is a key regulatory enzyme in the heart that is involved in the catecholamine-mediated control of excitation– contraction coupling, as well as in a myriad of other functions including activation of transcription factors and control of metabolic enzymes. The second messenger cAMP activates PKA by binding to the regulatory (R) subunits, causing release of the activated catalytic (C) subunits. The fact that, following cAMP-engagement, PKA mediates a plethora of cellular responses has raised the question of how specificity is maintained. In recent years, features of this pathway that contribute to specificity have been uncovered.1 A key role is played by AKAPs (A kinase anchoring proteins), a family of proteins that act as molecular scaffolds to anchor PKA in the vicinity of specific substrate molecules,2 thus focusing PKA activity toward relevant substrates. A second mechanism contributing to specificity revolves around the spatial control of the cAMP signal itself. Restriction of intracellular diffusion of cAMP has been shown by using a variety of approaches,3–5 including direct imaging of gradients of cAMP in response to activation of various G protein– coupled receptors (GPCRs).6 A key role in shaping cAMP intracellular pools is played by phosphodiesterases (PDEs), the enzymes that hydrolyze cAMP.7 Indeed, individual PDE isoforms have been shown to be functionally Original received February 28, 2008; revision received August 14, 2008; accepted August 19, 2008. From the Dulbecco Telethon Institute (G.D.B., A.Z., V.L., M.Z.), Venetian Institute of Molecular Medicine, Padova, Italy; and Neuroscience and Molecular Pharmacology (A.T., X.L., M.D.H., G.S.B., M.Z.), Faculty of Biomedical & Life Sciences, University of Glasgow, Scotland, United Kingdom. Correspondence to Dr Manuela Zaccolo, Neuroscience and Molecular Pharmacology, Faculty of Biomedical and Life Sciences, University Avenue, G12 8QQ, Glasgow, UK. E-mail [email protected] © 2008 American Heart Association, Inc. Circulation Research is available at http://circres.ahajournals.org DOI: 10.1161/CIRCRESAHA.108.174813 836 Di Benedetto et al Compartmentalized Signaling by PKA Isoforms 837 forms. By using FRET- and FRAP-based imaging approaches we show that, in cardiomyocytes, PKA-RI and PKA-RII, by anchoring to endogenous AKAPs, define distinct compartments within which cAMP is specifically controlled by different subsets of PDEs. In addition, we demonstrate that cAMP levels rise selectively in the PKA-RI and PKA-RII compartments in a stimulus-specific manner, leading to the phosphorylation of unique subsets of downstream PKA targets. The generation of distinct pools of cAMP within cells that allows for the selective activation of individual PKA isoforms is instrumental for the cell to modulate specific physiological functions and points to means for developing strategies for selective pharmacological intervention. Materials and Methods Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 Primary cultures of neonatal cardiac ventriculocytes from 1- to 3-day old rats were prepared as described.6 All the details concerning generation of constructs, cells transfection, Western blotting, immunostaining and confocal imaging, FRAP experiments, FRET imaging and RT-PCR are described in the expanded Materials and Methods section in the online data supplement, available at http://circres. ahajournals.org. Results Generation of cAMP Sensors Selectively Targeted to the PKA-RI and PKA-RII Compartments We set out to assess whether PKA-RI and PKA-RII are selectively and independently activated by specific extracellular stimuli and generated 2 FRET-based probes that, by selectively targeting to the same subcellular compartments as the endogenous PKA isoforms, monitor the cAMP signals generated at these sites. We took advantage of the unique dimerization/docking domain sequences that have been shown17 to mediate anchoring of PKA-RI and PKA-RII subunits to AKAPs. Thus, by fusing the dimerization/docking domain from either RI␣ (amino acids 1 to 64) or RII (amino acids 1 to 49) to the N terminus of the soluble Epac-1 sensor,18 we generated the sensors RI_epac and RII_epac (Figure IA in the online data supplement). For both sensors, it is believed that the binding of cAMP to the cAMP-binding domain will result in a conformational change that causes an increase in the distance of the cyan fluorescent protein and yellow fluorescent protein moieties, with a consequent reduction of the FRET signal, as shown for the parent sensor.18 The modified sensors have been tested with respect to maximal FRET response and to dose-response behavior (supplementary materials and supplemental Figure I). We found that RI_epac and RII_epac are equally sensitive to cAMP changes. RI_epac and RII_epac Show a Different and AKAP-Mediated Localization in Cardiac Myocytes To assess the ability of the modified sensors to effectively bind to AKAPs, we coexpressed RI_epac with ezrin and RII_epac with AKAP79. Ezrin is a dual-specificity AKAP localized at the cortical cytoskeleton and at microvilli,19 whereas AKAP79 localizes at the plasma membrane (Figure 1).20 Coexpression in CHO cells of RI_epac with ezrin results in the relocalization of the sensor to the sub–plasma membrane region and to microvilli, whereas coexpression of Figure 1. Targeted FRET-based cAMP sensors. Confocal images of CHO cells expressing either RI_epac or RII_epac alone (left panels) or in combination with ezrin and AKAP 79, respectively (right images). The middle images show the localization of green fluorescent protein (GFP)-tagged ezrin and GFP-tagged AKAP79 in CHO cells. Scale bars⫽10 m. RII_epac with AKAP79 results in the relocalization of the sensor at the plasma membrane, confirming that the modified sensors localize within the cell where AKAPs are present. To verify if RI_epac and RII_epac are targeted to different subcellular compartments in neonatal cardiac myocytes, the localization of the sensors was analyzed by confocal microscopy. As a localization marker, the Z-line protein Zasp fused to the red fluorescent protein mRFP (zasp-RFP) was coexpressed in combination with either RI_epac or RII_epac. As illustrated in Figure 2A and 2I, RI_epac shows a tight striated pattern overlaying with both the Z and the M sarcomeric lines (see line intensity profiles at the bottom of Figure 2). In contrast, the distribution of RII_epac shows a very strong localization that corresponds to the M line and a much weaker localization overlaying the Z line (Figure 2B and 2L). Such localization is identical to the localization of overexpressed full-length RI and RII subunits and corresponds to the localization of endogenous RI and RII subunits (supplemental Figure II). To assess whether the differences in localization were attributable to anchoring of the sensors to endogenous AKAPs, we used the AKAP-competing peptides RIAD21 and SuperAKAP-IS.22 These peptides have been shown to compete selectively with the binding of PKA-RI and PKA-RII to endogenous AKAPs. In particular, the RIAD peptide displays more than 1000-fold selectivity for RI over RII,21 whereas the peptide SuperAKAP-IS is 10 000-fold more selective for the RII isoform relative to RI.22 Challenge of cells expressing RI_epac with RIAD and of cells expressing RII_epac with SuperAKAP-IS completely abolished the striated pattern of localization of the sensors (Figure 2C and 2D), whereas RIAD and SuperAKAP-IS did not have any effect on the localization pattern of, respectively, RII_epac and RI_epac (not shown). The accepted paradigm for the PKA signaling pathway is that type II PKA is associated with particulate subcellular fractions via binding to AKAPs, whereas type I PKA is primarily cytoplasmic.11 Our confocal imaging studies 838 Circulation Research October 10, 2008 Figure 2. RI_epac and RII_epac localize in different subcellular compartments via binding to AKAPs. Confocal images of cardiomyocytes expressing either RI_epac or RII_epac alone (A and B) or in combination with the competing peptides RIAD (C) or SuperAKAP-IS (D). Localization of the marker zasp-RFP in the same cell is shown in E through H. The overlay between probe localization and zasp-RFP is shown in I through N. The bottom images show, for each cell, the intensity profile of the probe signal (in blue) and of the zasp-RFP signal (in red) in the region indicated by the black line. Scale bars⫽10 m. Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 suggest, however, that RI is also anchored in neonatal cardiac myocytes. To assess the extent of anchoring of the RI_epac and RII_epac sensors, we conducted fluorescence recovery after photobleaching (FRAP) experiments. As shown in Figure 3A, following fluorescence bleaching in cells expressing either the untagged, cytosolic cAMP sensor Epac-1 or 1 of the targeted sensors, we found that fluorescence recovery occurred with a t1/2 of 5.7⫾0.4 seconds (n⫽12) for Epac1, 14.3⫾1.9 seconds (n⫽10) for RI_epac, and 21.6⫾1.7 seconds (n⫽10) for RII_epac. Fluorescence recovery was almost complete for the parent Epac-1 probe (fractional recovery of 94.2⫾1.2%). However, this was reduced to 73.1⫾3.4% for RI_epac and to 45.4⫾5.0% for RII_epac. These results confirm that although the Epac-1 parent probe is free to diffuse in the cytosol, the diffusion of both RI_epac and RII_epac is substantially constrained. However, despite the mobility of both the RI_epac and RII_epac being restricted, we noted that RI_epac was 1.6 times as mobile as RII_epac. To assess the extent to which the reduced mobility of RI_epac and RII_epac was attributable to anchoring to endogenous AKAPs, we repeated the FRAP experiments in cardiomyocytes expressing each of the targeted sensor in combination with specific competing peptides. Figure 3B shows a significant increase in the fractional recovery both for cells expressing RI_epac in combination with RIAD (85.3⫾2.3% [n⫽10]) and for cells expressing RII_epac in combination with SuperAKAP-IS (80.1⫾2.5% [n⫽11]). Accordingly, we found a decrease in the recovery times with a t1/2 of 8.4⫾0.8 seconds (n⫽10) in cells expressing RI_epac⫹RIAD and of 8.9⫾0.9 seconds (n⫽11) in cells expressing RII_epac⫹SuperAKAP-IS. These results demonstrate that RI_epac and RII_epac specifically localize to different intracellular compartments primarily by binding to specific endogenous AKAPs. Figure 3. AKAP binding limits the intracellular mobility of RI_epac and RII_epac. Mean FRAP curves recorded in cardiomyocytes expressing Epac-1 (white), RI_epac (red), or RII_epac (green) in the absence (A) and in the presence (B) of the competing peptides RIAD and SuperAKAP-IS, as indicated. Error bars indicate SEM. Di Benedetto et al Compartmentalized Signaling by PKA Isoforms 839 Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 Figure 4. Cyclase and PDE activity in the PKA-RI and PKA-RII compartments. Representative kinetics of FRET changes recorded in cardiomyocytes expressing either RI_epac (gray circles) or RII_epac (black circles) in response to the application of 5 mol/L forskolin (A), 100 mol/L IBMX (B), 10 mol/L cilostamide (C), 10 mol/L EHNA (D), and 10 mol/L rolipram (E). F, Summary of all the experiments performed in the above conditions. Error bars indicate SEM. *0.01 ⬍ P⬍0.05. ns indicates not significant. cAMP Levels Are Specifically Regulated in the PKA-RI and PKA-RII Compartments In a first set of experiments, we wanted to assess whether the PKA-RI and PKA-RII compartments have equal access to cAMP. Cardiac myocytes expressing either RI_epac or RII_epac were challenged with 5 mol/L forskolin. As shown in Figure 4A and 4F, the 2 sensors detected a comparable rise in [cAMP] with ⌬R/R0 ⫽2.1⫾0.4% (n⫽7) for RI_epac and ⌬R/ R0⫽2.9⫾0.4% (n⫽14) for RII_epac (P⫽0.24), indicating that the compartments hosting PKA-RI and PKA-RII are equally associated to adenylyl cyclases and have potentially access to comparable cAMP levels. Next, we wanted to assess the role of PDEs in the control of cAMP levels in both PKA compartments. When myocytes were challenged with isobutylmethylxanthine (IBMX) (100 mol/L), no significant difference was detected in the level of cAMP in the 2 compartments (⌬R/R 0 ⫽4.5⫾0.3%; n⫽20 for RI_epac and ⌬R/ R0⫽4.9⫾0.4%; n⫽15 for RII_epac; P⫽0.45) (Figure 4B and 4F), suggesting that the basal level of cAMP is under comparable levels of PDE control in both PKA-RI and PKA-RII compartments in these cells. To determine whether specific subsets of PDEs control the cAMP signal in the 2 PKA compartments, cardiac myocytes expressing either RI_epac or RII_epac were treated with selective PDE inhibitors. As shown in Figure 4C and 4F, PDE3 inhibition assessed using the selective inhibitor cilostamide (10 mol/L) generated a small and similar cAMP rise in both PKA compartments (⌬R/R0⫽0.8⫾0.2%; n⫽9 for RI_epac and ⌬R/R0⫽0.6⫾0.2%; n⫽11 for RII_epac; P⫽0.58). PDE2 inhibition assessed using the selective inhib- itor, EHNA (10 mol/L) resulted in a ⌬R/R0⫽2.2⫾0.8% (n⫽15) when detected by RI_epac and in a ⌬R/ R0⫽0.3⫾0.2% (n⫽12) when detected by RII_epac (P⫽0.04), indicating that, in basal conditions, PDE2 activity is prominent in the PKA-RI compartment but very low in the RII_epac compartment (Figure 4D and 4F). PDE4 inhibition, assessed using the selective inhibitor rolipram (10 mol/L), generated a ⌬R/R0⫽0.7⫾0.2% (n⫽13) when detected by RI_epac and a ⌬R/ R0⫽2.6⫾0.7% (n⫽16) when detected with RII_epac (P⫽0.02) (Figure 4E and 4F), indicating that, contrary to PDE2, PDE4 exerts its activity mainly in the PKA-RII domain and to a much lower extent in the PKA-RI compartment. These results show that cAMP levels are differently regulated in the PKA-RI and PKA-RII compartments and point to a specific association of individual PKA isoforms with selected subsets of PDEs in these cells. Individual GPCRs Generate a cAMP Signal Selectively in the PKA-RI or PKA-RII Compartments We next asked whether the PKA-RI and PKA-RII compartments may be coupled to specific GPCRs such that individual PKA isoforms respond selectively to cAMP signals elicited by different agonists. As shown in Figure 5A, the application of isoproterenol (10 nmol/L), a specific activator of -adrenoreceptors, generated a rise in [cAMP] more pronounced in the PKA II domain as compared to the PKA I domain (⌬R/R 0 ⫽2.5⫾0.5% [n⫽13] for RI_epac and ⌬R/ R0⫽4.5⫾0.7% [n⫽9] for RII_epac; P⫽0.007). Addition of IBMX (100 mol/L) abolishes such a difference. This result 840 Circulation Research October 10, 2008 Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 Figure 5. Effect of GPCR stimulation on the cAMP signal in the PKA-RI and PKA-RII compartments. Representative kinetics of FRET change on application of 10 nmol/L isoproterenol (A), 100 nmol/L GLP-1 (B), 300 nmol/L glucagon (C), and 1 mol/L PGE1 (D) recorded in cardiomyocytes expressing RI_epac (gray circles) of RII_epac (black circles). E, Summary of the experiments performed in the above conditions. F and G, FRET change detected in cardiomyocytes coexpressing either RI_epac in combination with the competing peptide RIAD (gray bars) or RII_epac in combination with SuperAKAP-IS (black bars) and stimulated with 10 nmol/L isoproterenol (F) or with 1 mol/L PGE1 (G). Error bars indicate SEM. *0.01⬍P⬍0.05; **0.001⬍P⬍0.01; ***P⬍0.001. is in agreement with our previous studies showing that -adrenergic stimulation generates a restricted pool of cAMP that activates selectively AKAP-anchored PKA-RII.6 By contrast, challenging the myocytes with GLP-1 (100 nmol/L) resulted in a larger [cAMP] increase in the PKA-RI compartment as compared to the PKA-RII compartment (⌬R/ R0⫽3.7⫾0.8%, n⫽15 for RI_epac and ⌬R/R0⫽1.0⫾0.4%, n⫽12, for RII_epac; P⫽0.008) (Figure 5B). Similarly, 300 nmol/L glucagon (Figure 5C) and 1 mol/L prostaglandin E1 (PGE1) (Figure 5D) generated a higher [cAMP] increase in the PKA-RI associated compartment than in the PKA-RII compartment, showing ⌬R/R0⫽1.3⫾0.4% (n⫽7) for RI_epac and ⌬R/R0⫽0.2⫾0.1% (n⫽6) for RII_epac (P⫽0.017) in the case of glucagon and ⌬R/R0⫽1.4⫾0.2% (n⫽35) for RI_epac and ⌬R/R0⫽0.6⫾0.2% (n⫽30) for RII_epac (P⫽0.01) in the case of PGE1. In the presence of the specific competing peptide RIAD, the cAMP signal generated by the application of isoproterenol (10 nmol/L) was now clearly detected by RI_epac (⌬R/R0⫽5.0⫾1.0% [n⫽9]; P⫽0.008 versus RI_epac alone; Figure 5F). Coexpression of SuperAKAP-IS and RII_epac did not affect RII_epac ability to detect the isoproterenol-induced cAMP signal (Figure 5F). Similarly, when RII_epac was coexpressed with the selective competing peptide SuperAKAP-IS, the amplitude of the cAMP signal generated by application of 1 mol/L PGE1 was now clearly detected by RII_epac (⌬R/R0⫽2.8⫾0.7% [n⫽17]; P⫽0.0001 versus RII_epac alone; Figure 5G), whereas coexpression of RIAD and RI_epac had no effect on the amplitude of the signal detected on PGE1 application (Figure 5G). In addition, we found that treatment with RIAD significantly reduced the velocity of the FRET change of RI_epac to PGE1 (supplemental Figure III). Taken together, these results demonstrate that individual GPCR agonists generate spatially restricted pools of cAMP that selectively activate individual AKAP-anchored PKA isoforms. Removal of PKA isoforms from their anchoring sites allows them to diffuse and to be activated by pools of cAMP that would not normally affect them. Di Benedetto et al Compartmentalized Signaling by PKA Isoforms 841 Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 Figure 6. Specific GPCR agonist stimulation results in a different pattern of downstream PKA targets phosphorylation. A, Western blots of cardiac myocyte lysates probed for PLB, TnI, and the 2AR with corresponding phosphoblots after treatment with 10 nmol/L isoproterenol and 1 mol/L PGE1. Quantifications are means of at least 3 separate experiments. Error bars indicate SEM. **0.001⬍P⬍0.01; *0.01⬍P⬍0.05. B, Representative Western blots of cardiac myocyte lysates probed for PLB and TnI with corresponding phosphoblots after treatment with isoproterenol 10 nmol/L with and without pretreatment with KT5720 (2 mol/L). Compartmentalized PKA Isozymes Phosphorylate Selected Subsets of Downstream Targets We next wanted to assess whether the selectivity of the cAMP signals generated in the PKA-RI and PKA-RII compartments on stimulation of individual GPCRs has a functional relevance and results in a specific pattern of PKA-mediated phosphorylation of downstream targets. To this aim, we studied the phosphorylation level of several PKA targets after stimulation with either isoproterenol or PGE1. The phosphorylation level of phospholamban (PLB), troponin (Tn)I, and the  adrenergic receptor type 2 (2AR) was markedly increased (Figure 6A) on stimulation with isoproterenol (1 nmol/L) but not on stimulation with PGE1 (10 mol/L). Stimulation of myocytes with isoproterenol in the presence of the PKA inhibitor KT5720 (2 mol/L) completely abolished the increased phosphorylation level of both PLB and TnI (Figure 6B), confirming the involvement of PKA. Unexpectedly, PGE1-stimulated cells showed a reduction in the phosphorylation level of PLB and TnI as compared to untreated cells. Further analysis indicated that the reduced phosphorylation of these targets was dependent on the activity of phosphatases (supplemental Figure IV). Based on these results we can conclude that individual agonists, via activation of specific PKA isoforms, affect distinct subsets of downstream targets. A Gi-Mediated Mechanism Contributes to Control the cAMP Signal, Leading to the Phosphorylation of PLB and TnI Four different receptors for PGE have been described (EP1 to EP4) with EP2 and EP4 being coupled to G␣s and EP3 being coupled to G␣i.23 We asked whether the reduction in the phosphorylation level of PBL and TnI observed on PGE1 stimulation may be attributable to activation of an EP3 receptor and subsequent G␣i-mediated inhibition of cyclase activity. RT-PCR analysis of mRNA extracted from neonatal rat cardiomyocytes confirmed that these cells express high levels of message for the G␣i-coupled EP3 receptor, as well as message for the G␣s-coupled EP2 and EP4 receptors (Figure 7A). To evaluate the occurrence and the relevance of Gi activation on the local control of the cAMP signal generated by PGE1, we performed imaging experiments applying PGE1 on cardiomyocytes that had been pretreated with the Gi-inhibitor pertussis toxin (PTX). As shown in Figure 7B, application of 1 mol/L PGE1 following 2 to 4 hours pretreatment with 2 g/mL PTX generated a comparable cAMP increase in the PKA-RI and PKA-RII compartments. In particular, PTX pretreatment results in a much-increased cAMP signal in the PKA-RII compartment (⌬R/R0⫽1.7⫾0.4% [n⫽11] versus 0.6⫾0.2% [n⫽30] in the absence of PTX; P⫽0.006). Indeed, this equals the amplitude of the signal generated in the PKA-RI compartment (⌬R/R0⫽1.4⫾0.2%; P⫽0.54; see Figure 7B). No significant effect of PTX pretreatment was observed on the amplitude of the cAMP signal observed in the PKA-RI compartment (⌬R/R0⫽2.1⫾0.5% [n⫽8] as compared to ⌬R/R0⫽1.4%⫾0.2% in control cells; P⫽0.13). To assess the functional relevance of such a G␣i-mediated control of the cAMP signal, we measured the level of phosphorylation of PLB and TnI in cardiomyocytes pretreated with PTX for 1, 2, or 4 hours before the application of 842 Circulation Research October 10, 2008 Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 Figure 7. A Gi-mediated mechanism contributes to the control of the cAMP signal in the PKA II compartment. A, RT-PCR analysis of the EP receptors expressed in neonatal rat cardiomyocytes. Hypoxanthine phosphoribosyltransferase (HPRT) is used as a control for input mRNA concentration. B, FRET changes recorded in cardiomyocytes expressing either RI_epac (gray bars) or RII_epac (black bars) with or without pretreatment with PTX (2 g/mL for 2 to 4 hours) and challenged with 1 mol/L PGE1. C, Western blots of cardiac myocyte lysates probed for PLB and TnI with corresponding phosphoblots after treatment with 1 or 10 nmol/L isoprenaline and 1 mol/L PGE1 with and without pretreatment with PTX (2 g/mL for 1, 2, and 4 hours) Quantifications are means of at least 3 separate experiments. Error bars indicate SEM. *0.01⬍P⬍0.05. PGE1. Figure 7C shows that, on inhibition of G␣i, PGE1 stimulation induce a significant increase in the phosphorylation level of both these PKA-RII–specific targets (compare Figures 6 and 7C). Thus, a G␣i-mediated mechanism appears to contribute significantly to the control of the cAMP signal generated by PGE1 stimulation in the PKA-RII domain. Discussion The organization of the signaling machinery in discrete compartments is increasingly recognized as a critical feature for the specificity of the cAMP/PKA system in cardiomyocytes.24 Here, we used real-time imaging of cAMP to study how the diversity of PKA isoforms may contribute to the transduction of specific downstream signals. We did this by targeting FRET-based reporters of cAMP concentration at intracellular sites where endogenous PKA-RI and PKA-RII isoforms localize. We demonstrate that PKA-RI and PKA-RII reside in physically segregated and distinct compartments within which the level of cAMP appears to be selectively regulated by different subsets of PDEs, although the exact contribution of individual PDEs would require simultaneous inhibition of combinations of different isoforms. We show that the cAMP signal is specifically generated either in the PKA-RI or in the PKA-RII compartment depending on the GPCR agonist applied and that cAMP does not diffuse from one compartment to the other so as to cross-activate PKA isozymes, allowing fidelity of the response (Figure 8). One functional consequence of such compartmentalization is that isoproterenol stimulation leads to the specific phosphorylation of PLB, TnI, and 2AR, whereas PGE1 stimulation does not affect these substrates, demonstrating that individual PKA isoforms are coupled with defined subsets of targets and that PKA isoforms activity is not promiscuous. Our findings are consistent with previous work25–27 showing that, in cardiac myocytes, there is a clear dichotomy between the effects of PGE1 and isoproterenol on a variety of cAMP-dependent events. These studies demonstrated that isoproterenol generates an increase in contractile force25 Di Benedetto et al Compartmentalized Signaling by PKA Isoforms 843 Figure 8. Model of PKA isoforms compartmentalization. A, Activation of the PGE receptor system leads to the generation of a restricted cAMP pool affecting PKAI. The signal in the specific PKA-RII compartments may be switched off with the contribution of an EP3-dependent, Gi-mediated mechanisms. B, Only when the AR is activated via binding of the appropriate agonist a cAMP pool is generated in the PKA-RII compartment and this isoform is activated to phosphorylate a specific subset of downstream targets. Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 enhances ventricular pressure development and induces phosphorylation of target proteins such as phosphorylase kinase and TnI,26 whereas PGE1, although elevating cAMP to comparable levels and inducing activation of PKA similar to isoproterenol, does not show any effect on contractility or on the phosphorylation of these target proteins. The general notion concerning subcellular localization of PKA isoforms in cardiac myocytes is that PKA-RII holoenzyme is localized whereas PKA-RI is mainly cytosolic. Biochemical studies on cell homogenates showed that PKARII subunits are bound to particulate material in heart cells, whereas RI subunits are largely soluble.10,11 Interestingly, the selective effects of -adrenergic stimulation on heart function has been shown to correlate with activation of a membranebound fraction of PKA, whereas PGE1 stimulation increases the activity of a soluble pool of PKA.26 Our data now provide a mechanism for these observation by showing that catecholamines generate restricted pools of cAMP that selectively engage PKA-RII isoforms. However, the notion of a PKA-RI migrating freely in the cytosol, as suggested on the basis of previous biochemical studies, is difficult to reconcile with any selectivity in the activation of PKA isozymes, particularly considering that PKA-RI is more readily activated by cAMP as compared to PKA-RII.13 In tissues other than the heart, dual-specificity AKAPs capable of binding PKA-RI and -RII have been described,28 and AKAP-mediated localization of PKA-RI to the neuromuscular junction29 or to interphase microtubules and specific regions of the mitotic spindle has been shown.30 The discovery in Caenorhabditis elegans of a specific RI-binding AKAP that does not interact with RII subunits31 suggests the potential for nonredundant PKA-RI localization and function and a specific role for localized PKA-RI in modulating T-cell receptor signaling has been demonstrated.32 Thus, by performing FRAP experiments on intact cells, here we find that neonatal cardiac myocytes express a considerable amount of PKA-RI anchor sites, as shown by the slow fluorescence recovery time and the large immobile fraction detected in cells expressing the RI_epac sensor. This suggests that a large fraction of the PKA-RI isozyme may in fact be anchored in the heart in vivo. The fact that PKA-RI is found mainly in the supernatant of heart cell homogenates may reflect relatively low affinity interactions between PKA-RI and the protein binding partners that are lost during the homogenization and washing steps. Notwithstanding this, the nature of the PKA-RI anchoring proteins in cardiac myocytes remains to be established. Catecholamine-mediated sympathetic control of cardiac stimulation is a major compensatory mechanism that maintains or augments systolic and diastolic ventricular function during physiological stress or pathological conditions. In particular, catecholamines selectively improve diastolic function by reducing myofilament calcium sensitivity through phosphorylation of proteins such as TnI and accelerate sequestration of calcium into the sarcoplasmic reticulum through phosphorylation of PLB and release of its inhibitory effect on the SERCA pump.33 Enhanced and sustained cardiac adrenergic drive, however, is known to be deleterious and to contribute, in part, to development and progression of pathological states such as heart failure.34 Our results indicate that key proteins involved in the catecholaminemediated regulation of cardiac contractility are under the control of a restricted pool of cAMP that selectively activates a subset of PKA-RII isozymes, thus leading to a coordinated and specific response. In addition, we show that a supplementary element contributing to specificity is provided by a Gi-mediated mechanism that contributes to keep the PKA-RII compartment clear of cAMP unless the appropriate catecholaminergic stimulus impinges on the cell. Such a mechanism may indeed serve to protect the heart from excessive adrenergic stimulation in pathological conditions. Interestingly, PGE1 stimulation is known to protect myocardial tissue from injury following ischemia and reperfusion,35 an effect that has been suggested to depend on PGE-mediated stimulation of EP3 receptors in cardiac myocytes36 and the consequent Gi-mediated inhibition of cAMP synthesis.37 In summary, the present work provides original insight into the mechanisms that underpin cAMP/PKA specificity of response by demonstrating that, in cardiac myocytes, both PKA-RI and PKA-RII isoforms subsets anchor to subcellular 844 Circulation Research October 10, 2008 sites via binding to endogenous AKAPs. This defines exclusive signaling domains within which the cAMP signal is uniquely generated via activation of specific GPCR and their associated G proteins and is uniquely modulated by the activity of different subsets of PDEs, resulting in stimulus-specific phosphorylation of downstream protein targets. These results provide a mechanism for the different function of PKA-RI and PKA-RII subsets and provide a functional rationale for the design of isoformspecific activators and inhibitors of PKA. Acknowledgments We thank Martin Lohse for providing Epac-1, John Scott and Kjetil Tasken for the constructs for RIAD and for SuperAKAP-IS, Kjetil Tasken for ezrin and ezrin-GFP, Matteo Vatta for wt-Cypher/ZASPGFP, and Marc Dell’Acqua for AKAP-79 and AKAP-79-GFP. Sources of Funding Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 This work was supported by Telethon Italy grant GGP05113; Human Frontier Science Program Organization grant RGP0001/2005-C (to M.Z.); Fondation Leducq grant O6 CVD 02 (to M.Z.); and the European Commission grant LSHB-CT-2006-037189 (to M.Z., G.S.B., and M.D.H.); and Medical Research Council grant G0600765 (to M.D.H. and G.S.B.). Disclosures None. References 1. Tasken K, Aandahl EM. Localized effects of cAMP mediated by distinct routes of protein kinase A. Physiol Rev. 2004;84:137–167. 2. Wong W, Scott JD. AKAP signalling complexes: focal points in space and time. Nat Rev Mol Cell Biol. 2004;5:959 –970. 3. Jurevicius J, Fischmeister R. cAMP compartmentation is responsible for a local activation of cardiac Ca2⫹ channels by beta-adrenergic agonists. Proc Natl Acad Sci U S A. 1996;93:295–299. 4. Barnes AP, Livera G, Huang P, Sun C, O’Neal WK, Conti M, Stutts MJ, Milgram SL. Phosphodiesterase 4D forms a cAMP diffusion barrier at the apical membrane of the airway epithelium. J Biol Chem. 2005;280:7997–8003. 5. Rich TC, Fagan KA, Nakata H, Schaack J, Cooper DM, Karpen JW. Cyclic nucleotide-gated channels colocalize with adenylyl cyclase in regions of restricted cAMP diffusion. J Gen Physiol. 2000;116:147–161. 6. Zaccolo M, Pozzan T. Discrete microdomains with high concentration of cAMP in stimulated rat neonatal cardiac myocytes. Science. 2002;295: 1711–1715. 7. Houslay MD, Baillie GS, Maurice DH. cAMP-Specific phosphodiesterase-4 enzymes in the cardiovascular system: a molecular toolbox for generating compartmentalized cAMP signaling. Circ Res. 2007;100:950 –966. 8. Mongillo M, McSorley T, Evellin S, Sood A, Lissandron V, Terrin A, Huston E, Hannawacker A, Lhose MJ, Pozzan T, Houslay MD, Zaccolo M. Fluorescence resonance energy transfer-based analysis of cAMP dynamics in live neonatal rat cardiac myocytes reveals distinct functions of compartmentalized phosphodiesterases. Circ Res. 2004;95:67–75. 9. Scholten A, van Veen TA, Vos MA, Heck AJ. Diversity of cAMPdependent protein kinase isoforms and their anchoring proteins in mouse ventricular tissue. J Proteome Res. 2007;6:1705–1717. 10. Corbin JD, Sugden PH, Lincoln TM, Keely SL. Compartmentalization of adenosine 3⬘:5⬘-monophosphate and adenosine 3⬘:5⬘-monophosphatedependent protein kinase in heart tissue. J Biol Chem. 1977;252: 3854 –3861. 11. Brunton LL, Hayes JS, Mayer SE. Functional compartmentation of cyclic AMP and protein kinase in heart. Adv Cyclic Nucleotide Res. 1981;14: 391–397. 12. Dostmann WR, Taylor SS, Genieser HG, Jastorff B, Doskeland SO, Ogreid D. Probing the cyclic nucleotide binding sites of cAMP-dependent protein kinases I and II with analogs of adenosine 3⬘,5⬘-cyclic phosphorothioates. 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J Biol Chem. 1991;266:14188 –14192. 18. Nikolaev VO, Bunemann M, Hein L, Hannawacker A, Lhose MJ. Novel single chain cAMP sensors for receptor-induced signal propagation. J Biol Chem. 2004;279:37215–37218. 19. Algrain M, Turunen O, Vaheri A, Louvard D, Arpin M. Ezrin contains cytoskeleton and membrane binding domains accounting for its proposed role as a membrane-cytoskeletal linker. J Cell Biol. 1993;120:129 –139. 20. Klauck TM, Faux MC, Labudda K, Langeberg LK, Jaken S, Scott JD. Coordination of three signaling enzymes by AKAP79, a mammalian scaffold protein. Science. 1996;271:1589 –1592. 21. Carlson CR, Lygren B, Berge T, Hoshi N, Wong W, Taskén K, Scott JD. Delineation of type I protein kinase A-selective signaling events using an RI anchoring disruptor. J Biol Chem. 2006;281:21535–21545. 22. Gold MG, Lygren B, Dokurno P, Hoshi N, McConnachie G, Taskén K, Carlson CR, Scott JD, Bardford D. Molecular basis of AKAP specificity for PKA regulatory subunits. Mol Cell. 2006;24:383–395. 23. Narumiya S, Sugimoto Y, Ushikubi F. Prostanoid receptors: structures, properties, and functions. Physiol Rev. 1999;79:1193–1226. 24. Bornfeldt KE. A single second messenger: several possible cellular responses depending on distinct subcellular pools. Circ Res. 2006;99: 790 –792. 25. Keely SL. Prostaglandin E1 activation of heart cAMP-dependent protein kinase: apparent dissociation of protein kinase activation from increases in phosphorylase activity and contractile force. Mol Pharmacol. 1979;15:235–245. 26. Hayes JS, Brunton LL, Mayer SE. Selective activation of particulate cAMP-dependent protein kinase by isoproterenol and prostaglandin E1. J Biol Chem. 1980;255:5113–5119. 27. Brunton LL, Hayes JS, Mayer SE. Hormonally specific phosphorylation of cardiac troponin I and activation of glycogen phosphorylase. Nature. 1979;280:78 – 80. 28. Huang LJ, Durick K, Weiner JA, Chun J, Taylor SS. D-AKAP2, a novel protein kinase A anchoring protein with a putative RGS domain. Proc Natl Acad Sci U S A. 1997;94:11184 –11189. 29. Imaizumi-Scherrer T, Faust DM, Benichou JC, Hellio R, Weiss MC. Accumulation in fetal muscle and localization to the neuromuscular junction of cAMP-dependent protein kinase A regulatory and catalytic subunits RI alpha and C alpha. J Cell Biol. 1996;134:1241–1254. 30. Imaizumi-Scherrer T, Faust DM, Barradeau S, Hellio R, Weiss MC. Type I protein kinase a is localized to interphase microtubules and strongly associated with the mitotic spindle. Exp Cell Res. 2001;264:250 –265. 31. Angelo R, Rubin CS. Molecular characterization of an anchor protein (AKAPCE) that binds the RI subunit (RCE) of type I protein kinase A from Caenorhabditis elegans. J Biol Chem. 1998;273:14633–14643. 32. Skalhegg BS, Tasken K, Hansson V, Huitfeldt HS, Jahnsen T, Lea T. Location of cAMP-dependent protein kinase type I with the TCR-CD3 complex. Science. 1994;263:84 – 87. 33. MacLennan DH, Kranias EG. Phospholamban: a crucial regulator of cardiac contractility. Nat Rev Mol Cell Biol. 2003;4:566 –577. 34. Sabbah HN. Biologic rationale for the use of beta-blockers in the treatment of heart failure. Heart Fail Rev. 2004;9:91–97. 35. Hohlfeld T, Zucker TP, Meyer J, Schrör K. Expression, function, and regulation of E-type prostaglandin receptors (EP3) in the nonischemic and ischemic pig heart. Circ Res. 1997;81:765–773. 36. Hohlfeld T, Meyer-Kirchrath J, Vogel YC, Schrör K. Reduction of infarct size by selective stimulation of prostaglandin EP(3)receptors in the reperfused ischemic pig heart. J Mol Cell Cardiol. 2000;32:285–296. 37. Yamamoto T, Habuchi Y, Tanaka H, Suto F, Morikawa J, Kashima K, Yoshimura M. EP receptor-mediated inhibition by prostaglandin E(1) of cardiac L-type Ca(2⫹) current of rabbits. Am J Physiol. 1999;277: H1369 –H1374. Downloaded from http://circres.ahajournals.org/ by guest on June 17, 2017 Protein Kinase A Type I and Type II Define Distinct Intracellular Signaling Compartments Giulietta Di Benedetto, Anna Zoccarato, Valentina Lissandron, Anna Terrin, Xiang Li, Miles D. Houslay, George S. Baillie and Manuela Zaccolo Circ Res. 2008;103:836-844; originally published online August 28, 2008; doi: 10.1161/CIRCRESAHA.108.174813 Circulation Research is published by the American Heart Association, 7272 Greenville Avenue, Dallas, TX 75231 Copyright © 2008 American Heart Association, Inc. All rights reserved. Print ISSN: 0009-7330. Online ISSN: 1524-4571 The online version of this article, along with updated information and services, is located on the World Wide Web at: http://circres.ahajournals.org/content/103/8/836 Data Supplement (unedited) at: http://circres.ahajournals.org/content/suppl/2008/08/28/CIRCRESAHA.108.174813.DC1 Permissions: Requests for permissions to reproduce figures, tables, or portions of articles originally published in Circulation Research can be obtained via RightsLink, a service of the Copyright Clearance Center, not the Editorial Office. Once the online version of the published article for which permission is being requested is located, click Request Permissions in the middle column of the Web page under Services. Further information about this process is available in the Permissions and Rights Question and Answer document. Reprints: Information about reprints can be found online at: http://www.lww.com/reprints Subscriptions: Information about subscribing to Circulation Research is online at: http://circres.ahajournals.org//subscriptions/ Online Supplement Di Benedetto et al., Protein kinase A type I and type II… Supplemental Materials and Methods Reagents DMEM-Hepes, Medium 199, PBS, FBS, L-glutamine, penicillin and TRIzol reagent were purchased from Invitrogen. Prostaglandin E1 (PGE1), isoproterenol, glucagon-like peptide 1 (GLP1), glucagon, forskolin, erythro-9(2-hydroxy-3-nonyl) adenine (EHNA), cilostamide, rolipram, isobutyl-methylxanthine (IBMX), pertussis toxin (PTX), okadaic acid and KT 5720 were obtained from Sigma-Aldrich. All chemicals were analytical grade. Restriction enzymes, T4 ligase, and shrimp alkaline phosphatase (SAP) were purchased from New England Biolabs, Taq polymerase from Euroclone. Transfectin Lipid Reagent and Superscript IIITM were obtained from BioRAD. Constructs generation The Epac-1 genetically encoded sensor for cAMP1 was kindly provided by M. Lohse (Institute of Pharmacology and Toxicology, University of Würzburg, Germany). RI_epac and RII_epac were generated by fusion to the N-terminus of Epac-1 of the sequence encoding for the dimerization-docking (DD) domain of RIα (64 aa) or RIIβ (49 aa), respectively. Between the DD domain and Epac-1, the 27 aa linker A (EAAAK)5A was inserted. Such a linker was chosen because it folds as a monomeric hydrophilic α-helix and is effective in separating heterofunctional domains in a fusion protein, avoiding inadequate interactions between the domains and allowing them to work independently 2. The mRFP-ZASP and CFP-ZASP constructs were generated by substituting the mRFP3 and ECFP fluorophores to the GFP in the wt-Cypher/ZASP-GFP4, kindly provided by Dr M. Vatta. The RI-ECFP construct was generated by substituting the RIα to the RIIβ in the RII-ECFP5. Finally, RI-RFP and RII-RFP were constructed by substituting The mRFP fluorophore to the ECFP in the RI-ECFP and RII-ECFP. The constructs containing the cDNA for RIAD and SuperAKAP-IS were generated by external PCR starting from the RIAD-GFP and SuperAKAP-ISGFP constructs that were kindly provided from Dr. J.D. Scott (Oregon Health and Science University, U.S.A.) Online Supplement Di Benedetto et al., Protein kinase A type I and type II… Cell culture and transfection Primary cultures of cardiac ventricular myocytes from 1- to 3-day old Sprague Dawley rats (Charles River Laboratories, Wilmington, MA) were prepared as described5 and transfected with Transfectin Lipid Reagent (BioRAD), following the supplier instruction. Imaging experiments were performed 24–48 h after transfection. Western blotting Treated cardiac myocytes were washed twice with ice cold PBS (phosphate buffered saline) before cellular lysates were prepared. Cellular lysates were prepared in lysis buffer containing 25mM Hepes, pH 7.5, 2.5 mM EDTA, 50 mM NaCl, 30 mM sodium pyrophosphate, 10% (v/v) glycerol and 1% (v/v) Triton X-100 and Complete TM EDTA-free protease inhibitor cocktail tablets (Roche).Protein concentration of lysates were quantified using the Bradford assay and all samples were equalised for protein concentration. Proteins were separated by gel electrophoresis and transferred to nitrocellulose. The following antibodies were used to detect phospho-proteins and native proteins in lysates from control and treated cells: Phospho-Troponin I (cardiac) Ser23/24 (Cell Signaling, product code 4004), Troponin I (Cell Signaling, product code 4002), Phospho-phospholamban Ser 16 (Upstate, product code 07-052), Phospholamban (Upstate, product code 05-205), Phospho- βadrenergic receptor2 Ser345/346 (Santa Cruz, product code sc-16718), βadrenergic receptor2 (Santa Cruz, product code sc-569). Quantification of phospho-proteins was done using densitometry software Quantity One. Arbitrary phosphorylation units were calculated and results plotted against controls. Plotted results represent the mean of at least three independent experiments with standard errors. Immunostaining and Confocal Imaging Cardiac ventricular myocytes were co-transfected with different combination of constructs or decorated with anti-PKA RI or anti-PKA RIIβ antibodies (BD Transduction Laboratories). Alexa fluor 568-conjugated antimouse antibody (Molecular Probes) were used as secondary antibodies. CHO cells were transfected with either RI_epac or RII_epac, alone or in combination with, respectively, ezrin and AKAP79. Confocal images were acquired 24-48 hours Online Supplement Di Benedetto et al., Protein kinase A type I and type II… after transfection by using the broadband confocal Leica TCS SP5 system (Leica Microsystems) and a HCX PL APO 63x1.4NA oil-immersion objective. Cells were maintained in Hepes-buffered, calcium-free, Ringer-modified saline (125 mM NaCl, 5 mM KCl, 1 mM Na3PO4, 1 mM MgS04, 5.5 mM glucose and 20 mM Hepes, pH 7.5), at room temperature (20-22°C), and excited using the 458-nm line of an argon laser for imaging CFP and the 543-nm line of a helium-neon laser for imaging mRFP. FRAP experiments FRAP experiments were performed 24-48 hours after transfection on a Leica TCS SP5 confocal system. Experiments and data analysis were performed by using the Leica FRAP application wizard. Cardiomyocytes trasfected with either RI_epac or RII_epac were maintained in the Ringer-modified saline described for confocal imaging, with the addition of 1 mM CaCl2, at room temperature, and excited using the 514-nm line of an argon laser for imaging YFP. Image acquisition was performed by using a HCX PL APO 63x1.4NA oilimmersion objective. Each experiment was conducted at 100% laser power, acquiring 5 images with AOTF set to 5%, one bleaching image with AOTF set to 100%, and 70 images of fluorescence recovery with AOTF set to 5%. The time between frames was minimized. The fluorescence recovery half-time, t1/2, was calculated as the time necessary for the fluorescence signal to recover to 50% of the asymptote intensity. Values are expressed as the mean ± the standard error of the mean (SEM). To determine the mobile fraction we compared the fluorescence in the bleached region after full recovery (F∞ROI) with the fluorescence before bleaching (Fi) and immediately after bleaching (F0). The mobile fraction Mf was calculated as: 100 ∗ FCELL-PRE (F∞ROI - F0 ) ∗ (Fi - F0 ) FCELL( t ) where FCELL-PRE is the mean fluorescence intensity in the whole cell before bleaching and FCELL( t ) is the fluorescence outside the bleached area at each time point. The first term in the above equation contains a correction for photobleaching during the acquisition of the post-bleach images. Online Supplement Di Benedetto et al., Protein kinase A type I and type II… Fluorescence Resonance Energy Transfer Imaging FRET imaging experiments were performed 24-48 h after cardiomyocytes transfection. Cells were maintained at room temperature in the Ringermodified saline (see above) additioned of CaCl2 (1 mM), and imaged on an inverted microscope (Olympus IX50) with a FLUAR 100xNA1.3 oil-immersion objective (Zeiss). The microscope was equipped with a CCD camera (Sensicam QI, PCO, U.S.A.), a software-controlled monochromator (Polychrome IV, TILL Photonics, Germany), and a beam-splitter optical device (Multispec Microimager; Optical Insights, U.S.A.). Images were acquired using custom-made software and processed using ImageJ (http://rsb.info.nih.gov/ij/). FRET changes were measured as changes in the background-subtracted 480/545-nm fluorescence emission intensity on excitation at 430 nm and expressed as either R/R0, where R is the ratio at time t and R0 is the ratio at time = 0 sec, or ΔR/R0, where ΔR = R – R0. Values are expressed as the mean ± SEM. RT-PCR Total RNA was isolated from cultured rat neonatal cardiac myocytes and from freshly isolated rat adipocytes from epididymal fat pads by using the TRIzol reagent (Invitrogen). An aliquot of total RNA was retrotranscribed by Superscript IIITM (Invitrogen) to generate cDNA. mRNAs for the four EP receptors genes and for the hypoxanthine-guanine phosphoribosyltransferase (HPRT) gene were amplified from the cDNA. For the oligonucleotide sequences used for the detection of cDNA specific for the EP1, EP2, EP3, EP4 and HPRT see the supplementary materials. Each amplification reaction, containing all reagents except the primers, was split in two. Primers to amplify one of the four EP receptors were added to one half of the reaction, whereas in the primers to amplify the HPRT gene were added to the other half. Cycling conditions were: 94°C for 30 s, Tann (68°C for EP1 and EP4, 60°C for EP3 and 56°C for EP2 and HPRT) for 30 s, 72°C for 30 s, 35 cycles. The predicted sizes of the amplified fragments were of 135 bp for EP1, 126 bp for EP2, 122 bp for EP3, 130 bp for EP4 and 160 bp for HPRT. Oligonucleotides used for the detection of cDNA specific for the EP1, EP2, EP3, EP4 and HPRT genes are shown below, together with the annealing temperature used for each amplification. Online Supplement Di Benedetto et al., Protein kinase A type I and type II… EP1 Fwd 5’-GAGCCCCCTGCTGGTATTGG-3’ Rev 5’-GCGCAGCAGGATGTACACCC-3’ Tann: 68°C EP2 Fwd 5’-CTGCCTTTCACAATCTTTGC-3’ Rev 5’- TCTAAGGATGACAAAAACCC-3’ Tann: 56°C EP3 Fwd 5’-GCCGCTATTGATAATGATGC-3’ Rev 5’-GCGAAGCCAGGCGAACGGCG-3’ Tann: 60°C EP4 Fwd 5’-TCCATTCCGCTCGTGGTGCG-3’ Rev 5’-TCCAAGGGTCCAGGATGGGG-3’ Tann: 68°C HPRT Fwd 5’-AGTCCCAGCGTCGTGATTAG-3’ Rev 5’-CCATCTCCTTCATGACATCTCG-3’ Tann: 56°C Supplemental Information RI_epac and RII_epac are equally sensitive to cAMP. In order to test the performance of the modified sensors, CHO cells expressing either the original Epac-1 or one of the novel targeted sensors were challenged with the direct activator of adenylyl cyclase, forskolin (5 μM) together with the non-selective PDE inhibitor, IBMX (100 μM) so as to elicit a saturating cAMP response8. The average maximal FRET change for the three sensors is shown in Online Fig IB. When compared to Epac-1 (ΔR/R0 = 1.00 ± 0.08, n = 11), both targeted probes show a 50% reduction in the maximal FRET response, with a ΔR/R0 = 0.51 ± 0.03 (n = 35) for RI_epac and a ΔR/R0 = 0.49 ± 0.04 (n = 20) for RII_epac, respectively. This indicates that fusion of the DD domain to Epac-1 roughly halves the maximal FRET change. We found that such a reduction in FRET response is likely due to the presence of the DD domain (see below). A dose-response curve generated by challenging CHO cells expressing either RI_epac or RII_epac with increasing concentrations of forskolin shows a complete overlap for the two sensors with an EC50 of about 1 μM (Online Fig IC). These results show that although fusion of the DD domain to the cAMP sensor affects its performance, the resulting RI_epac and RII_epac probes maintain a reasonable maximal FRET response (about 10%) and are equally sensitive to cAMP changes. Online Supplement Di Benedetto et al., Protein kinase A type I and type II… Fusion of the DD domain to the Epac-1 sensor is responsible for the observed reduction of its maximal FRET change. Fusion of the DD domain to Epac-1 resulted in a 50% reduction of the maximal FRET change for both targeted sensors. We wondered if this reduction was due to anchoring of the sensors to endogenous AKAPs and the consequent steric hindrance which would limit the conformational change needed for maximal FRET. To test this hypothesis, we coexpressed RI_epac and RII_epac with the AKAP competing peptides RIAD6 and SuperAKAP-IS7, respectively. These peptides have been shown to compete selectively with the binding of PKA-RI and PKA-RII to endogenous AKAPs. Challenge of CHO cells expressing either RI_epac in combination with RIAD or RII_epac in combination with SuperAKAP-IS resulted in a maximal FRET change not significantly different from the maximal FRET change recorded in cells expressing the sensor alone (Online Fig ID). These results indicate that the N-terminal fusion of the DD domains per se is responsible for the reduction in the maximal FRET change of the targeted sensors. Mobilization of the RI_epac sensor reduces the speed of FRET change in response to PGE1. Our results demonstrate that application of selected GPCR agonists generates distinct pools of cAMP that are sensed selectively by either RI_epac or RII_Epac. It is expected that mobilization of the targeted sensor from their anchoring sites results in a slower FRET change in response to the specific stimulus as a consequence of the increased distance of the sensor from the selected pool of cAMP. Indeed, we found that the response to PGE1 is much slower if detected by RI_epac in the presence of RIAD than the FRET change detected by RI_epac alone (P = 0.0008) (see Online Fig III). The same effect was not found in the case RII_epac. In this case the response to isoproterenol resulted to be equally fast when detected by RII_epac alone or by RII_epac in the presence of SuperAKAP-IS (P = 0.98). The t/2 of the response (i.e. the time to reach half-maximal FRET change) was of about 40 seconds in both cases. It should be noted, however, that the response to isoproterenol is one order of magnitude faster than the response to PGE1. Online Supplement Di Benedetto et al., Protein kinase A type I and type II… Nikolaev et al.1, in their description of the parent cAMP sensor Epac-1, reported that, in HEK-β1AR cells challenged with isoprenaline 1 μM, the t/2 of the sensor response is about 50 seconds. In addition, even when cells were treated with saturating stimuli (e.g. 25μM forskolin in the presence of 100mM IBMX) we were not able to detect a t/2 faster than 40 s. Thus, a t/2 of about 40 seconds for the response to isoproterenol, either detected by RII_epac or by RII_epac in the presence of SuperAKAP-IS, seems to be the fastest possible detectable by the sensor. Therefore, a faster cAMP increase generated by isoproterenol in the PKA type II microdomain can not be appreciated due to limiting probe activation time. References 1. 2. 3. 4. 5. 6. 7. Nikolaev VO, Bunemann M, Hein L, Hannawacker A, Lhose MJ. Novel single chain cAMP sensors for receptor-induced signal propagation. J Biol Chem. 2004;279:37215-37218. Arai R, Ueda H, Kitayama A, Kamiya N, Nagamune T. Design of the linkers which effectively separate domains of a bifunctional fusion protein. Protein Eng. 2001;14:529-532. Campbell RE, Tour O, Palmer AE, Steinbach PA, Baird GS, Zacharias DA, Tsien RY. A monomeric red fluorescent protein. Proc Natl Acad Sci U S A. 2002;99:7877-7882. Vatta M, Mohapatra B, Jimenez S, Sanchez X, Faulkner G, Perles Z, Sinagra G, Lin JH, Vu TM, Zhou Q, Bowles KR, Di Lenarda A, Schimmenti L, Fox M, Chrisco MA, Murphy RT, McKenna W, Elliott P, Bowles NE, Chen J, Valle G, Towbin JA. Mutations in Cypher/ZASP in patients with dilated cardiomyopathy and left ventricular noncompaction. J Am Coll Cardiol. 2003;42:2014-2027. Zaccolo M, Pozzan T. Discrete microdomains with high concentration of cAMP in stimulated rat neonatal cardiac myocytes. Science. 2002;295:1711-1715. Carlson CR, Lygren B, Berge T, Hoshi N, Wong W, Taskén K, Scott JD. Delineation of type I protein kinase A-selective signaling events using an RI anchoring disruptor. J Biol Chem. 2006;281:21535-21545. Gold MG, Lygren B, Dokurno P, Hoshi N, McConnachie G, Taskén K, Carlson CR, Scott JD, Bardford D. Molecular basis of AKAP specificity for PKA regulatory subunits. Mol Cell. 2006;24:383-395. Online Supplement Di Benedetto et al., Protein kinase A type I and type II… Online Figure Legends Online Fig I. (A) Schematic representation of RI_epac and RII_epac (B) Average maximal FRET change for Epac-1 (white), RI_epac (gray) and RII_epac (black), elicited by forskolin 5 μM and IBMX 100 μM in CHO cells. Error bars indicate SEM. ***, P < 0.001. (C) Dose-response curves for RI_epac (gray circles) and RII_epac (black circles), expressed in CHO cells treated with forskolin concentration ranging from 2.5 nM to 100 μM. Error bars indicate SEM. (D) Average maximal FRET changes detected in cardiomyocytes co-expressing either RI_epac in combination with the competing peptide RIAD (gray bars) or RII_epac in combination with SuperAKAP-IS (black bars) and stimulated with forskolin 5 μM and IBMX 100 μM. Error bars indicate SEM. Online Fig II. A) Localization of endogenous R subunits. Confocal images of neonatal cardiac myopcytes decorated with antibodies specific for for RI (RI end) and RII (RII end). B) Confocal images of cardiomyocytes co-expressing either the full-length, CFP-tagged, RI or RII (in blue) and zasp-RFP (in red). The overlay is shown in green. Panels on the right show, for each cell, the intensity profile of the RI/RII-CFP signal (in blue) and of the zasp-RFP signal (in red) in the region indicated by the black line. C) Confocal images of cardiomyocytes co-expressing either RI_epac or RII_epac (in blue) and the full-length, RFP-tagged, PKA RI or RII (in red). The overlay is shown in green Right panels show, for each cell, the intensity profile of the probe signal (in blue) and of the RI/RII-RFP signal (in red) in the region indicated by the black line. Online Fig III. t/2 of FRET changes detected in cardiomyocytes coexpressing either RI_epac in combination with the competing peptide RIAD and stimulated with 1 μM PGE1 (gray bars), or RII_epac in combination with SuperAKAP-IS and stimulated with 10 nM isoproterenol (black bars). Error bars indicate SEM. ***, P < 0.001. Online Supplement Di Benedetto et al., Protein kinase A type I and type II… Online Fig IV. Phosphatase inhibitors rescue Gi-mediated reduction in basal levels of phospho-Tn I and phospho-PLB. Representative western blots of cardiac myocyte lysates probed for phospholamban and Troponin I with corresponding phospho-blots after treatment with 1 μM PGE1 with and without pre-treatment of okadaic acid (100 nM). Online Figure IV
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