Venue
Application
University of Science and Technology of Hanoi
18 Hoàng Quốc Việt, Hanoi, Vietnam
Application is online and requires a registration form,
a motivation letter, a one-page CV and one
reference letter. Applicants must rank the thematic
group they wish to follow, in order of preference
www.usth.edu.vn Online application: www.cbid.asia
Accommodation
Closing date: 30 June 2016, 23:59pm ICT
Somerset Hoa Binh Hanoi
106 Hoàng Quốc Việt, Hanoi, Vietnam
Results of selection: 14 July 2016
Contact: [email protected]
CAGCCTATAGTGGGTAAACCGTGCTAGTTT
TGCCGTCCTTAGTGCCCATGAATGTGGAGC
GGAGGAACGAGAAGTCATAACACGTGCTTC
CCTCGCAGTTCCTCCTATCACGATACCGAT
TCGAAACGGGCCATGCGGCCGGGTCCTCAT
TCTGACTCAAATAGCCTTGCTGGATACTTC
CTCGGGGCCTGTACCACACGGCCGATAGAG
CGAGCTGACAATGGGCGGTCTCCGTTGACG
AGTAAGATCAACCCGCCCACTACCCTGCAG
TGTACTCTCATAGGTGGATTGAATTCCTCA
TAGTGTAGTTGGGCTACTCAGTATTCAAAC
GGCTGTTCCCAGGGGCTTAGGCGGCGCCCA
CCGTACCATACCGTCACCGACGCTAATCAT
TTGCGTTAGTTCGCAGAAATGCCAGCTGGC
AGAAATCCGAGTTCACAGAGACTACTAGTT
GTGAACCTGCAACATTGCGTCAGTGGAATT
TGTAACCGACGGGCCGGAGTGCAACATCTT
TCCAAAGGTCCTGTTCCTACGGCTCGGTAA
ACTATAAAACCCTGTTATCCGACCATGGGC
ATTGGTATTCATGATGGAAGTCTG1TAAC0
GACGCAGA0AGACAC1TTGACACAAAGCTA
ACGGAA0TTACACCATAAGTA10ACCAAAA
ACAAT1AAGCGAGGATA0TCGACTT0CGTC
TGTCAG1CGTAGCTACATA1CAC1GC0AGA
0G000G0GAC0TT11ATAG1TT0T0CCAAT
0TC0CG1T1G0GTGGTAG0CGAGT1G0GG0
C0A10AT1000ACAACGGT0TG0TA1G11G
AGTA01AT1GT0C11AAAG0C110G10TC0
AAA0GCCG00ATC0CGACG0G0T01ACA11
A0101CGG11G10C10T1C00C1010TTGA
A1G01C000T0TT0GATGT0T1C010G001
G001AAG0TAT1GTC0A10C0T0111001T
G0011G00100110G01TT11TC10111C1
0111110GAG11A11101111001000010
0111111A11101C110T11101110010A
0010A0G000T1110C001111000G1110
01T10011C111110010100101011000
101000100110001110101101001010
Computational
Biology for
Infectious
Diseases
Summer School
18-25 September 2016
Hanoi, Vietnam
Ambassade de France au Vietnam
Summer School in
Computational Biology for
Infectious Diseases
18-25 September 2016
Hanoi, Vietnam
About: The CBID summer school is designed to provide
students, researchers and professionals with basic
concepts and hands-on experience in quantitative
analyses of high throughput data. The school is organized
in 5 parallel thematic groups for 6 days, preceded by 1
day of plenaries and followed by 1 day of review and
practice sessions. The trainings will be given by leading
experts in their fields, with strong teaching experience for
beginners.
For: students and health
professionals from Asian
countries
Level: beginner/
intermediate
Fee: free,
accommodation is
covered by the school.
Travel grants available
upon application
Language: English, good
level required
Five parallel thematic groups:
Softwares:
Teaching faculty:
Molecular phylogeny
(Meta)genomics
Population genetics
Transmission dynamics
Disease forecasting
Sequences alignments,
models of molecular
evolution, phylogeny
reconstruction by
maximum-likelihood and
Bayesian methods of
estimation
Next-generation
sequencing, whole
community analysis,
exploratory data analysis,
multiple testing,
clustering, classification,
longitudinal analyses
Genetic markers, HardyWeinberg equilibrium, F
statistics, linkage
disequilibrium, population
structure, Wahlund effect,
Mantel test, statistical
tests
Time series analysis,
compartmental models, R0
estimation, control policies,
agent-based models,
parameters estimation, data
visualization
Bias/variance trade-off,
cross-validation, ROC/
AUC, tree regressions,
ensemble methods,
ARIMA models, MSE/MAE
SeaView, BLAST, PhyML,
Muscle, MrBayes, BEAST
R/RStudio, Bioconductor
Fstat, Genepop, Genetix,
Easypop, MEGA, Excel
Epipoi, R/RStudio, GAMA
R/RStudio, caret package
Olivier Gascuel, Institut
Pasteur, Paris, France
Jean-Daniel Zucker, IRD,
Paris, France
Thierry de Meeûs, IRD,
Montpellier, France
Cécile Viboud, NIH/
Fogarty, Bethesda, USA
Michael Johansson, USCDC, Puerto-Rico, USA
Guy Baele, University of
Leuven, Belgium
Edi Prifti, ICAN, PitiéSalpêtrière, Paris, France
Franck Prugnolle, CNRS,
Montpellier, France
Nicolas Marilleau, IRD,
Paris, France
Matthew Graham, John
Hopkins, Baltimore, USA
Veronika Bošková, ETH
Zurich, Switzerland
Hồ Bích Hải, VAST/IOIT,
Hanoi, Vietnam
Virginie Rougeron,
CNRS, Montpellier, France
Wladimir Alonso, NIH/
Fogarty, Bethesda, USA
Lê Viết Thanh, OUCRU,
Hanoi, Vietnam
Maria Anisimova, Zurich
University, Switzerland
Eugeni Belda, Institut
Pasteur, Paris, France
Anne-Laure Bañuls, IRD,
Montpellier, France
Alex Becker, Princeton
university, USA
Hannah Clapham,
OUCRU, HCM, Vietnam
Joseph N. Paulson,
Harvard SPH, USA
Alexis Drogoul, IRD,
Hanoi, Vietnam