United Arab Emirates University Scholarworks@UAEU Theses Electronic Theses and Dissertations 12-2014 A Comparative Study of Domestic and Hospital Environmental Microbial Populations in Al-Ain (UAE) Amna Ali Jaffal Follow this and additional works at: http://scholarworks.uaeu.ac.ae/all_theses Part of the Environmental Sciences Commons Recommended Citation Jaffal, Amna Ali, "A Comparative Study of Domestic and Hospital Environmental Microbial Populations in Al-Ain (UAE)" (2014). Theses. 559. http://scholarworks.uaeu.ac.ae/all_theses/559 This Thesis is brought to you for free and open access by the Electronic Theses and Dissertations at Scholarworks@UAEU. It has been accepted for inclusion in Theses by an authorized administrator of Scholarworks@UAEU. For more information, please contact [email protected]. A COMPARATIVE STUDY OF DOMESTIC AND HOSPITAL ENVIRONMENTAL MICROBIAL POPULATIONS IN AL-AIN (UAE) By AMNA ALI JAFFAL A Th esis Submitted to th e F ac ul ty of Sc ienc e of th e unitedArab Emirate U niversity in partial f ul f il ment of th e requirements f or th e deg ree of Master of Environmental Sc ience F ac ul ty of Scienc e UAE U niversity D ec ember 1 994 The Thesis of Amna All Jaffal for the degree of Master Evironmental sciences is approved \ Chair of Committee' O--+-!�>�- Ibrahim M. Banat, Ph D Examining Committee Member: Herbert Nasanze, Ph D. Examining Committee Member: AbdulmaJeed S Ameen, Ph. D Examining Committee Member: Abdullah Abu-Ruwaida, Ph D. Dean of the Faculty of Science: Salah EI-Nahawy United Arab Emirates University of SCience In ABSTRACT This is the first attempt to estimate b i olog ical i ndoor pol lution i n the environment of AI-Ain city. The numbers and types of bacteria and fun g i in the air and on the surfaces were measured in AI-Ain hospital and three d ifferent types of d omestic environments. F ive d ifferent types of wards at AI-Ai n hospita l , med ica l , surg ica l , ped iatrics, operati ng theater, a n d i ntensive care unit were stud i e d . Their estimated indoor bioaerosols were compared to i ndoor b i oaerosols in three types of dwe l l ing houses, very g ood , average, and poor q u a l ity houses i n AI-Ain city . A bacteri o l og ical mechanical a i r sampler, M K2 (Case l l a London) was used i n this stu d y . T h e result o f this study showed that the s a m e g roups of bacteria and fun g i isolated from the hospital environment were also found i n domestic a i r samples. The hig hest number of bacteria in the hospital was found in the ped iatric and female medica l wards while the l owest were i n the operating theater. The number of bacteria in the domestic environment was related to the type of housing ; the h i g he r the q ual ity of house the l ower the number of m icro-organisms. 111 Pathogenic and human related micro-org anisms were found to be more prevalent in a hospital environment than i n the domestic environment. In general the hospital a i r m i cro b i a l counts were compara b l e to very good qual ity houses. The commonest species of fun g i found i n both environments were Asperigil/us niger. Surface samples in hospital and homes showed that surface m icro-organisms orig inated from air contaminants . A com parison of hospital and domestic bacterial sensitivity was carried out u s i ng coag ulase negative Staphylococci ( e N S) . These were a lso compared to the patients'n e N S . The sensitivity pattern of e N S i n d icated that the "environment" or t h e source o f t h e m i crobes had some effect u pon the micro-organisms. Domestic a irborne eNS were very sensitive to nearly a l l the anti biotics tested while patients harbored the m ost res i stant e N S with hospital airborne e N S fal l ing in between. Hospital a i rborne agents wou ld seem to be a m i xture of patients' strains and the environmental strains possibly bro u g ht i n by visitors to the hospita l . iv TABLE OF C ONTENTS Title page ii Abstract iii Table of contents iiii List of tables viii List of figures x Acknowledgments xii CHAPTER I. Introduc tion 1 Th e Objec tive of Th e Study 5 CHAPTER II 7 Review of l iterature 1 .1 H i story of I ndoor Air Pol l ution 7 1 .2 The Pollutants 9 1 .2 . 1 Dust 10 Sources of I ndoor Airborne M i crobes 11 1 .3 . 1 Outdoor Environment 11 1.3 v TABLE OF C ONTENTS 1.3 Sources of I ndoor Airborne M i crobes 11 1 .3. 2 I ndoor Contam ination 12 Factors I nfluencing I ndoor M icrobial Levels 14 1 .4. 1 Air Currents 15 1 .4. 2 Other factors 16 1.5 Types of Environmental Bacteria 17 1 .6 Types of Environmental F u n g i 18 1 .6. 1 N i che o f Fung i in I ndoor Environment 18 1 .7 Hospital Environment 20 1 .8 Source of I ndoor Contamination i n H ospital Environment 22 1 .9 Hospital Bacteria Associated With I nfections 23 1.10 Domestic Environment M icrobes 25 1.1 1 Sick Building Syndrome 27 1 .4 CHAPTER III MATERIALS AND METHODS 28 2. 1 Sources of Materials For Study 28 2. 1 . 1 Hospital Environment Study 28 vi TABLE OF C ONTENTS 2. 1 2. 2 Sources of Materi a l s For Study 28 2. 1. 2 Domestic Environment Study 32 Sampling Techniques 42 2.2. 1 Air Samples 42 a P l ate Exposure M ethod 42 b Determ i n ation of Opti mum Plate Exposure Time 42 c Mechan ical Bacterial Air Sampler M K2 43 d Determ i nation of Opti mum Time Requ ired For Mech a n i ca l a i r Sampler 48 2. 2. 2 Surface S a m p l i n g 52 2.3 C u lture Media 52 2.4 Identification Techn ique 53 2.4. 1 Bacteria l I d e ntification 53 2.4. 2 Fungal Identificatio n 56 2. 5 Sensitivity Test 56 2.6 Data Processing Statistical M ethods and Analysis 57 vii TABLE OF CONTENTS CHAPTER IV RESULTS 63 CHAPTER V DISCUSSION 93 CHAPTER VI CONCLUSION 111 CHAPTER VII BIBLIOG RAPHY 1 14 viii LIST OF TABLES P ag e Tabl e 1 The total num ber of C F U on blood Agar at d ifferent time using plate a i r exposure method Tabl e 2 The total number of C F U on blood Agar at different time using mach i n e air sampler method Tabl e 3 65 Domestic a i r m icro-organisms isolated from three 68 types ofhouses Tabl e 6 D o mestic air m icro-org a nisms isolated from three types of houses comparing Living rooms to bedrooms Tabl e 7 51 Hospital air m icro-organ isms isolated from five ward u s i n g a i r samples Tabl e 5 50 M icro-organisms isolated by exposure method com paredwith i solates by air sampler Tabl e 4 46 71 M i cro-org a n i s m s i solated from the hospital environment compared to m icro-organisms from the house environment col lected using the air samples ix 73 LIST OF TABLES Ta b l e 8 Surface m icro-organisms isolated from d ifferent wards at AI-Ain Hospita l Ta b l e 9 77 M icro-org a n isms isolated from surfaces i n d ifferent house types Ta b l e 10 79 M icro-organisms isolated from hospital surfaces compared with those from different house types Ta b l e 11 I ntensive Care U nit and Operating Theater microorganism s isolated from air and surface samples Ta b l e 12 84 Total num bers of air and surface m icro-organisms isolated from hospital and the three types of houses T a b l e 13 80 85 The most d o m i nant fun g i in hospital air isolated from five wardusing a i r sampler 87 Ta b l e 14 A i r- borne fun g i i so l ated from three types of houses 88 Ta b l e 15 Air fun g i i solated from hospital and three types 91 of house Ta b l e 16 Sensitivity pattern of coag ulase negative staphylococci iso l ated from deferent areas a n d patients' bodies x 92 LIST OF FIGURES Pages F ig ure 1 A M a p of AI-Ain C ity. F ig ure 2 M a p of AI-Ain city showing the l ocation of AI-Ai n 30 Hospital a n d homes stud ied. 31 F ig ure 3 Photograph of AI-Ai n hospital . 34 F ig ure 4 Photog raph representing a ward-room inside the hospita l . 35 F ig ure 5 O utside views of a very good house (type 1 ) . 36 F ig ure 6 I nside views of a very good house (type 1 ). 37 F ig ure 7 Outside views of a medium qual ity house (type 2 ) . 38 F ig ure 8 I nside views of a med ium q u a l ity house (type 2 ) 39 F ig ure 9 O utside views of a poor qual ity house (type 3 ) . 40 F ig ure 1 0 i n s i d e views of a poor quality house (type 3 ) . 41 Xl LIST OF FIGURES Fig u re 11 Plate exposure culture method Fig u re 12 M echanical air sampler (Case l l a Bacterial Air Sampler M K2) Fig u re 1 3 45 47 C u lture plate after 48 hours incubation time showing growth of bacteria and fungi using plate exposure method for 30 min exposur tim e . 59 Fig u re 14 Fungal identification on g ross colonial appearance . 60 Fig u re 1 5 Fungal identification technique m icroscopic examination ( s l i d e culture) . 61 Fig u re 1 6 Picture of various unidentified bacteria . 62 Fig u re 1 7 C hart comparing H ospital a i r m i croorganisms isolated from five wards using a i r sampler. Fig u re 18 Chart comparing microorganisms isolated from hospital air with three types of house Fig u re 19 66 74 Chart comparing m icroorganisms isolated from hospital surfaces with those from d ifferent house surfaces Xll 81 ACKNOWLEDG MENT It g ives me great honour and pleasure to take this opportunity to thank my supervisors , Dr. l bra h i m Banat and Dr. Herbert Nsanze, for their great cooperation , their valuable advice, g u idance and patience throughout my study. I also greatly a ppreciate the help g iven by Dr. Abdou A. E I Mog heth. My deep appreciation and g ratitud e to the U .A . E . University, represented by its Chance l l or, H i s H ig h ness S h e i kh Nahyan Bin M u barak AI Nahyan, for g iving m e the opportunity to obtain a higher d eg ree. I am indebted and thankfu l to those working i n the ministry of health, headed by H i s . E m i nence. the M in i ster of Health , Ahmed Saeed AI Bad i for cooperation and assistance I would l i ke also to thank a l l those who assisted me during my work on this thesis especia l l y Dr. Abd u l Bari and M r. Mohammed xiii Yonis from the Department of C ommunity Med icine at the Facu lty of Medical Science . and H ealth at U .A . E . University, for their help in the statistical analysis of my data, a lso M r. , Ahmed Salem the chief technician of AI-Ai n hospital laboratori e s , and a l l the staff members in the Microbiology Department. F i n a l ly I would l i ke to express my deep thanks and gratitude to my parents, for their sacrifice and patience through all the stages of my study. I also wish to thank a l l my friends especially Ms Amna Hamad AI- Dhaheri , who hel ped me and stood by me during the period of my study. xiv CHAPTER I .................... �� �����...... ------------- INTRODUCTION P o l l ution is one of the most pressing problems of our age. Pol l ution of the atmosphere has n ow reached a level that poses a potential threat not only to the health and wel l-being of popu lations of the g l obe but to the survival of e ntire life (Samet and S peng ler, 1 991 ) . This study focuses o n indoor air, because indoor air is the med ium through wh ich peo p l e , buildings, and climate interact. Human health and their wel l-being are determined by physica l , chemica l , a n d biologica l properties o f their indoor air; a n d indoor air qua lity can be readily d efined and rationally control led . The contam ination of the indoor environment by microbial popu lation and other p o l l utants i s a major health problem (Langmuir, 1 980). The concentration of indoor pol l utants varies with the strength of the pol l ution sources , the vol u m e of the pol l uted space, the rate of air exchange between indoor and outdoor air, and other factors that affect removal of p o l l utants. H e a lth risks from indoor pol l ution 1 depend on indoor pol l utants concentration , patterns of human activity and type of indoor source of air pol l ution used such as com bustion source , which, along with indoor concentration of pollutants, determine personal exposures (Samet and S peng ler, 1 99 1 ) I ndoor biolog ica l pol l ution, whi l e of serious concern to a l l who inhabit i nteriors , h a s o n l y recently began t o receive the attention afforded outdoor or even indoor chemica l pol l ution (Yunginer et al. , 1 976) . This a pparent lack of interest is tied to the d ifficulties of sampling biolog ical aerosols and their variable health effects. The a i rborne bioflora i s i nherently com p l ex and variable to a point that d efies q uantification. The air i n a single room i n a "clean" house may contai n hundreds of d ifferent kinds of biolog ica l particles and technology does not exist to quantify or qual ify a l l of them . A s many as fou r d i stinct sampling modal ities are required if those particles that are measurable are to be accurately assessed . H ea lth effects of biolog ical aerosol s are basica l l y d i fferent from those o f thei r chemical counterparts. T h e maj ority of 2 bioaerosols are non pathogenic and cause disease only in sensitized or g rossly immunocompromised peo p l e . F u rthermore , pathogenic environmental micro-organisms are usually a b l e to infect only very suscepti ble hosts. The levels of e ither saprophytes or pathog e n s req uired to cause d i sease d iffer with each particle type and these levels are unknown for most microbes. It i s wel l documented that the hospital environment i s a source of hospital acq u i red infections ( Bennett and Brachman 1 992) . Many of the m i crobes which cause i nfectious d i seases such as tuberculosis, staphylococcal infections, brucel losis and most of nosocomial pneumonias are transmitted by indoor air. For this reason knowledge of the incidence of m i cro flora i n t h e hospital and i n residential dwe l l i ng is very important for the understanding of the poss i b l e types of infections and a l l erg ies caused by them . Furthermore , contro l ling the microbes in the hospital and domestic environment could play a rol e in the prevention of i nfectious d i seases. 3 The a i m of this study was to compare the numbers and types of a irborne microbial popu lation in a hospital and i n three types of d omestic environments in AI-Ain city. In d o i n g thi s we were trying to find the rel ation between these two environments and the effect of the enviro nment o n the types, numbers of m icro-org a ni sms. 4 THE OBJECTIVE OF THE STU D Y The main purpose of the study was to compare the numbers and types of envi ronmental micro-org a n i sms in AI Ain hospital and those found in homes of d ifferent social strata i n Al Ain city. It is wel l known that a hospital harbors a d iverse population of m icro-org an isms. The m icro-organisms in the hospital environment could be a source of hospital acq u i red i nfection . has been d ocumented that micro-organisms which It cause i nfectious d iseases can be a i rborne or be transmitted by hand lers. M any studies have been carried out to estimate hospital enviro nmental micro-org a n i sms in d ifferent areas of the worl d . H owever, t o o u r knowledge no microbial stu d i es have been done i n any of the AI-Ain hospitals or anywhere i n the UAE . The micro-org a n isms i n the air environment or surfaces of homes at AI-Ain city have a l so not been d ocumented. The i nfluence of d omestic microbes to inhabitants can be related to 5 i nfection i n their own home. Some of these agents are transmitted by a i r, particul arly from infected persons occupying the same room . A lthough most of these are viral upper and lower res p i ratory tract i nfections, bacteria can also be s i m i larly transmitte d , l ea d i n g to for example streptococcal pharyng itis and d iphtheri a . It i s esse ntial to know the types of micro-org an i sm s i n t h e h o m e environment and the extent o f pathogenic m icro org a n i s m s frequently encountered in the air or on surfaces i n the home e nv ironment . If s i m i lar pathogenic organisms are found i n t h e hospital and homes then they wou l d be identified and their characteristics compared to estimate possi b l e relationshi p and thei r m ovem e nts between the two environments . The micro-org anisms of i mportance to human h ealth would be subjected to a nti biotic sensitivity tests to d etermi n e their resistance patterns variation in both the hospital and home environments . The effect of the enviro n m e nt o n any queried anti biotics d i scussed. 6 resistance wi l l be CHAPTER II -------------- ---- 1. REVIEW OF LITERATURE 1.1 History of Indoor Pol l ution The problems of indoor poll ution began with the energy conservation just before World War I I , but the energ y crisis of 1 973 exacerbated the problems. In order to minimize the use of energy, several cou ntries began looking for ways to conserve energy. The largest user of energy was found to be the building sector which adopted two ways of energ y saving . F i rst, the equipment used i n b u i l d i n g s were made more efficient; and secondly, the bui ld in g s were better i nsulated to stop any air l eaks, and used as l ittl e outsi d e a i r as poss i b l e . The result of this process was l ess outsi d e a i r entering i nto these buildings to sweep o ut pollutants that are generated within the b u i l ding . Furthermore , occa s i o n a l l y pollutants brought i n from the out door add to those a lready g e nerated inside. Thus indoor levels of a i r pollution i s usual ly con s i dered worse than outdoor l evels ( M i l l er and Kel ler, 1 99 1 ) . Although this practice saved great amounts of energy, it was at an environmental cost. 7 Lucretius, a g reat p h i losopher, first suspected i ndoor a i r to be a potential agent for transmitting i nfectious d i sease , nearly two thousand years ago. H e saw d ust motes in a sun beam i n a dark room and considered the poss i b i l ity that the motes might carry pesti lences (Greg ory, 1 96 1 ) . Since then , it has been wel l documented that some d i seases are transmitted b y a i rborne particles ( N ational Research Council 1 96 1 , 1 98 1 , Kundsin , 1 980) . P u b l i c i nterest of the i ndoor a i r pol l ution has g rown considera bly over the past few years . A large part of this i nterest began when Leg ionnaire's D isease was d iscovered in 1 977 ( M i l ler and Kel ler 1 99 1 ) . The i ndoor environment can potentially place human occu pants at g reat risk, because enclosed spaces can confi ne aerosols and a l l ow them to build u p to infectious levels (Spen d love and F a n n i n , 1 98 3 ) . Ventilation systems can pick up contaminated air and d i stri bute i nfectious m icro-organisms to other parts of the b u i ld in g ( H u d d l eson and Munger, 1 940). Components of vent i l ation systems can actua l ly become contam inated and pathogenic micro-organi sms such as Legionella pneumophila are su bseq uently transmitted to occu pants (Gl ick, 1 978) . 8 the buildings 1 .2 The Pol luta nts The a i rborne p o l l utants that may be present i n the indoor environment comprise a complicated mixture of l iving and i nanimate materials of gases, vapors, fibers, dusts, and m icrobes. Studies carried out by H e a lthy B u i ld ings I nternational ( B i nn i e , 1 99 1 ) found that i n over one third o f more than 400 b u i l d i ng s studied , the major p o l l utant was a l lergenic fung i . I n g reater than two thi rd s , air supply systems were contaminated with dust, d i rt a n d microbes. The micro b i olog i ca l contaminants o f i ndoor air include viruses, bacteria , protozoa, algae, i nsect fragments, a n imal dander, and fungal s pores. The contaminants may be viable organisms that multiply i n an i nfected host or they may l ive in dust, soi l , water, o i l , org a n i c fi lms, food , vegetable debris, or wherever the micro cl i mate provides the rig ht temperature , humidity and nutrie nts for g rowth (Samet and Speng ler, 1 99 1 ). This i nvestigation excludes v i ruses, algae, and parasites. Although these a re i m portant, they are outside the scope of our study 9 1. 2.1 Dust C lean ambient a i r at the breathing level ( 1 .5 metres above the g round) contains 20-40 mg/m 3 of d ust in the form of sea spray, soluble salts, organic m atter, and microbes. M uch of inhaled d ust is harmless ( H o lt, 1 980). I ndoor d ust contains the sam e ingred ients as a m bient d ust, but the com position is significantly d ifferent. House d u st, especially in bedrooms, frequently contains m ites, hairs and feces of pets, insect frag ments, skin scal es of human and pets. House d ust may a lso contain pollen carried by wind or by insects ( M eyer, 1 983) . House d ust may also contain fungal spores, and bacteria which can act as i n d i rect a l l ergens by sti m u l ating the release of med iators from the host cel l ( Meyer, 1 983), and other components such ash of cigarettes or incinerators, fi bers , fingernail fil ings, food crumbs, g lue, o i l , soot, paint chips, p lant parts, soi l , wood shavings and others ( H u n g , 1 994). 10 1 .3 Sources of Indoor Airborne Microbes 1 .3.1 Outdoor Environment:The majority of biolog ica l particles found i ndoor comes from the outdoor environment. The m ajority of fungal spores encountered indoors are derived e ither d i rectly ( by penetration) or i n d i rectly (by penetration and subsequent g rowth o n surfaces) from outdoor a ir. Most fun g i are primary d ecay org a n isms and are a bundant on dead or dying plant and a n i m a l m aterials. Many are plant pathogens and can be present a bunda ntly in a i r wherever their host plants are g rown. A few fun g i are human pathogens. H owever, many fungal species are primari l y saprophytic decay org a n i sm s that can o p portuni stica l ly cause human d i sease and mainly exist i n outdoor environments such a s Cladosporium, Alternaria, Pencillium and Aspergillus. Us u ally outdoor fungal s pore levels exceed those i n d oors , only in cases of serious contam ination do i ndoor spore levels exceed outdoor l evels. A wide variety of bacteri a , most of whi ch a re not human pathogens such as Bacillus s pecies and Actinomycetes, are a bundant outdoor. These agents when provided with substrates after penetration may possibly g row o n i nterior surfaces . Other bacteria 11 such as L egionel/a pneumophila which cause human d i sease thrive i n outdoor reservoirs. This organismt i s basica l ly soi l born e , and i s probably i ntroduced i nto coo l i n g towers and other e n richmed environment d uring excavations for roads or buildings o r through sand storms ( Burg e and Fealey, 1 99 1 ) . 1.3. 2 Indoor Contamination:- M i cro-organisms found i n the environment are associated with human d roplets, d u st particles or on s ki n squames. Dro p l et nuclei are the smallest particles of bacterial or vira l residues from the evaporation of l arger particles expel led by cough i n g , sneezing or talking . They may remain suspended in air for long period s and a re carried by air current until inhaled or vented (Kund s i n , 1 985). D u st particles that have settled on surfaces may become resuspended by physical action and may remain a i rborne for a prolonged period. Airborne particles may remain suspended for hours or possi bly d ays, depend i ng on enviro nmental factors . S kin squames may become airborne and provide a mechan i s m for the a irborne transmission of org anisms ( Bennett and Brachman,. 1 992) . 12 such as Staphylococci I nd oor buildup of bioaerasols results from two general p rocesses:- materia l being shed by residents and accumulating i nd oors, and actual g rowth on i nterior substrates . Shed m aterials i nclude, particu l ates such as human and animal skin scales (dande r), bacteria , and dermatophytes. Human (or a n i m a l ) skin s ca l e s , for exa m p l e , support not only a l ively m ite popu l ation, but mesop h i l i c bacteria and fun g i such as Aspergillus a mste/odami and Wallemia sebi, both of which can stand relative d ryness. S k i n sca l e s as wel l as m a n y fabrics , leather and wood m aterials, a bsorb sufficient water from the a i r to support fun g a l g rowth . Bacterial endotoxins and (theoretical ly) fun g a l mycotoxins can accumulate i n d oors from m icro-organisms g rowin g o n i nterior surfaces . Adverse health effects from endotoxin in com mercial environments have been reported (Aas, 1 980). M ycotoxins have not been measured in a i r, but have been i m p l icated in cases of l eukemia fol l owing exposure to Asperigil/us speci e s . M ost severe i ndoor biologica l pol l ution problems result from m icro b i a l g rowth on surface withi n structures. Any substrate that i ncludes carbon source and water wi l l support the g rowth of some m i cro-org anis m . 13 An absolute requirement for a l l kinds of i nterior contam ination is a constant source of moisture, moreover a very small leak i n a roof or water p i pe i s sufficient to support a bunda nt fun g a l g rowth. Modern appli ances such as h u m i d ifiers, vaporizers, water s prays, cond itioners, evaporative coole rs , self-defrosti ng refrig e rators and flush toi l ets, provide stan d i n g water reservoirs which, when not absolutely clean, can provide ideal enri chment s ituation for the g rowth of m icro-org a n i s m s . I n these appl iances water (usually contam inated) is in contact with a moving a i r strea m which can p i c k u p sma l l particu l ates ( bacteria a n d a ntigens) and spray them i n t o room a i r ( Burg e , 1 98 5 ) . 1.4 Factors Inf l uencing I ndoor Microbial Level s:I nd oor surface contaminatio n by bacteria , fun g i or other biolog i ca l particles is only dangerous when the particles become a i rborne and inhaled . There are several factors that can cause aerosol ization of surface micro-organisms as l i sted below: 14 1.4.1 Air Currents Air i s almost never sti l l , and even the most d e l icate of air currents can cause fungal spores such as those of Aspergill us and Penicillium to become airborne. Air current produced by convection from rad iant heat, and by air mechanica l ly circulated by forced a i r systems are more than adequate to s pread d ust including entrapped biolog ica l particles, as wel l a s mobil izing surface g rowth . P ractica l l y any human or pet activity can increase airborne microbial l oads. Such activities incl u d e , vacuming , sweeping d ustin g , scrubbing contaminated surfaces and bed making . I ndoor concentrations vary , not only with the strength and the concentration of the pollution sources, but with the volume of the p o l l uted s pace ; and the rate of air exchange betwee n i ndoor and outdoor air. 15 1.4. 2 Oth er Factors The s ize and d ensity of the airborne particles can i nfluence the d i stance it moves. Wil liams et at. ( 1 956) d i scusses the m u ltitude of factors i nfluencing the bacterial cou nt in the a i r of occup ied school rooms. They l ist the fol lowing as i m portant factors : - Room a i r temperature versus the temperature outsi d e the class room - Rel ative humid ity outside versus the relative h u m i d ity i ns i d e . - Rai nfa l l on t h e day of t h e visit a n d over t h e previous 7 d ays. - Solar rad i ation on the d ay of the visit and on the previous 7 days. - External wind velocity and the degree of wi ndow o pen i ng . - Venti l ation rate and the number of chi l d ren i n the room - Amount of tal ki n g and the amount of activity of the chi ld re n . 16 Wind predictors d i rection of and m i cro relative humidity were biolog ical air the concentratio n . best The concentrations of bacteria and fungi were negatively associated with temperature ( except for Actinomycetes and the indoor concentration of moni l i aceous molds) and wind speed (except for Basidiomycetes) b ut were positively associated with rel ative humid ity ( M acher and H uang , 1 99 1 ) . 1.5 Type of Environmental Bacteria Bacteria occur i n a lmost every environment particularly i n d usty, d i rty places inhabited b y humans or animals. Most o f the species of bacteria isolated from buildings are harm less and frequently include members of the genera , Bacillus species, Micrococcus s pecies and Corynebacterium species. However, the species that have been associated with diseases incl ude Pseudomonas species especially P. aeruginosa, Fla vobacterium species, Staphylococcus aureus, Serratia Legionella penumophila ( B i nn i e , 1 99 1 ) . 17 marcescens and 1. 6 Type of Environmental F ung i Fung i are u b i q u itous i n nature and i nevitably enter b u i l d i n g s from t h e outdoors t o set u p coloni es wherever conditions for growth are favorable. They a re very resistant, and once they have estab l ished themselves in a n iche in a b u i ld i ng , they a re very d ifficult to comp l etely era d i cate. Studies carried out by Healthy Building I nternational ( B i n ni e, 1 99 1 ) found that in more than one thi rd of the b u i l d i n g s studied , one of the major pol l utants was fun g i. Some of these fun g i are known to be pathogenic. F u ng i isolated from heating, vent i l ating , a i r con d itioning systems and other parts of bui ld i n g s can cause problems i n susceptible people either by causing d i rect i nfection or by causing an al l ergy reaction ( M i l ler and Kel ler, 1 99 1 ) 1. 6. 1 Nich e of F ung i in Indoor Environment Some fung i , particularly some members of the Hyphomycetes, g row very wel l in an i ndoor environment. Species of Penicillium, Aspergillus, Cladosporium, Phoma, Rhodotorula, Ulocladium, Stachybotrys, etc. have been isolated from materials used i n i ndoor enviro nments. Chaetomium of the Ascomycotina 18 and some Basidiomycetes have a l so been i solated from wood structures of b u i l d i n g s . These fun g i cause decays in wood . Many other fun g i have a lso been i so l ated from or observed on plants and potting soils and on paper, plaster, carpet, g l ass, plastics, and many other item s . M any fungal spores can a lso come from vegetation near b u i l d i ng s . These s pores may be carried i nto a b u i l d i ng through doors , windows or outside a i r i ntakes ( H u n g , 1 994) . I n over 2 0 0 s u rveys o f a irborne spores, carried out i n various parts o f t h e worl d , four g enera ; Cladosporium, Alternaria , Pencillium a n d Aspergillus accounted for the highest mean percentage . These four genera also constituted the most prevalent i n a l l erg ic resp i ratory d isease (Col and Samson, 1 984) . Aspergillus s pecies are known to cause i nfections, especially A. niger and A. fumigatus ( B i nn i e , 1 99 1 ) . 19 1.7 Hos pita l Environ me n t The purpose of estimatin g t h e types a n d numbers of bacteria in hospital air is a s rel evant as for other indoor m icrobial population. The m icrobial q uantities and types are d i rectly and indirectly rel ated to patients as a source or as reci pients. The rol e the hospital environment plays i n n osocomial i nfections can occasionally be scie ntifica l l y d eterm ined . Although' hospital hyg iene i s g enera l ly h i g h , it is i m poss i b l e to exclude m i crobes from the enviro nment; but the q ua ntity can be contro l l e d . Each hospital has d i fferent standard of cleanl iness; this may i nfluence patient care. There are n o establ ished standards for viable or non viable particu l ate counts in the operating room or in any other hospital areas. H owever the accum u l ation of micro-organisms on surfaces can be used to evaluate housekeep i ng procedures as wel l as m i cro-org a nisms shed by patients and personnel . The micro-organisms of the hospital enviro nment and the microbiology of hospital acquired i nfections are i nsepara b l e . Health personnel have been rel uctant to accept this fact, but finding a solution depends on acceptance of the pro b l e m ( Ku nd s i n , 1 985) . 20 Some knowledge of e nvironmental m i crobes could serve as a tool for:- Identifying institutional l y rel ated i nfectious d i sease . - Tracing movements of a i rborne bacteri a . - Detecting persons, o bjects, activities, or items of e q u i pment that generate a irborne contam ination. - Evaluating the efficiency of air cleani n g d evices or systems. - Assessi ng the hazard s of hospital venti l ation systems . S ayer et al (1972) i n a study of hospital a irborne bacteria , categorized the hospital bacteria i nto two g roups : - ( a) The usually i nconsequent a i rborne bacte ri a l flora g ro u p whi ch included t h e colonies of Gram positive rods , Micrococcaceae, Diphtheroids, S. epidermidis a n d a l pha o r gamma haemolytic Streptococci. ( b) The potentially pathogenic a i rborne bacterial flora g ro u p , which I ncluded: Streptomyces, Fla vobacterium, Mimae tibe e . g . Mima l i ke or Herellea l i ke , Klebsiella, Staphylococcus 21 aureus, Achromobacter g roup, Pseudomonas species, Psudomonas aeruginosa and poss i b l ly Erwinia. 1 .8 Source of Indoor Contamination in Hospital Environment I ndoor hospital microbes can accumulate l i ke any other occupied buildings as descri bed already for d omestic b u i l d i n g s . Addition t o these there are special considerations for t h e hospital sources: 1 Staff members can be a source of environmental m icro org a nisms because of the inhalation of ambient microorganisms, therefore, personnel who work i n the cleanest hospital area such as operati n g room, have the l owest rate of colonization with Staphylococcus a ureus and personnel who work i n open ward s have the hig hest rate of colon ization ( Kundsin 1 985) 2 Patients and health care personnel can be victims as well as sources of environmental microorganisms. They are 22 victims when i nfected or colonized by hospital flora and sources when they shed these microorg a nisms. 3 M ed i ca l equipment and fluids when its contaminated . 4 Appl iances such as humidifiers, cool-mist vaporizers, a i r conditioners a n d ventil ation contribute t o aerosols. 5 Visitors and whatever materials they bring with them s uch as food and flowers . 6 Although there is (as yet) no evidence that the presence of carpets i n hospitals create an infection hazard , a l arge a mount of dust is deposited i n carpets , and these d u st particles are com bined with large number of airborne potentially pathogenic microorganism s ( Maurer, 1 985) . 1.9 Hospital Bacteria Associated with Inf ections Transmission of tuberculosis and staphylococcal i nfections in hospital environment are examples of airborne spread by means of d ro p l et nucl e i . Staphylococci are shed i n g reat numbers attached to tiny skin scales. Staphylococcus a ureus may cause i nfections of the respiratory system when i nhaled , food pOiso n i n g when swa l lowed and wound sepsis when a l l owed to 23 enter an open wound (Maurer, 1985). Although most staphylococcal wound sepsis is a result of hand transmission, i n one report, several post operative wound i nfections were said to have res u lted from the a irborne spread of Staphylococci from a staff member who remained at the peri phery of the operating room thro u ghout the surg ical procedure. The only route for transmission of the org a nisms was through the air (Bennett et al., 1992) . Esherichia coli is one of the common causes of i nfections of the urin a ry bladder. Some types of E.coli (Enteropathogenic E. coli EPEC) may be responsible for outbreaks of g a stroenteritis among neonatal unit. Other bacteria responsi ble for hospital i nfections a re Klibsiella, Proteus and Pseudomonas, and spore form i n g bacteria such as Clostridium tetani which i s commonly found i n the soil and enters the hospital i n d u st (Maurer, 1985) . Legionella pneumophila, an agent o f serious pulmona ry d i sease, e nters the indoor environment from b u i l d i ng vents located close to coo l i n g towers , and also from b u i l d i ng hot water 24 services ( More l y, 1 985). Formation of aerosols from contaminated water i s a major mode of spread of Legi o n e l l a ( Hart and M a k i n , 1 99 1 ), humans probably acquire the organism by inhaling aerosol s generated from these environmental sources as there i s evidence to s uggest that inhalation is a l so a mode of entry. 1 .1 0 Domestic Environmental Microbes:I n previous stu d i es ( Kodama and McGee 1 98 6 ; Raza et al., 1 989; Macher and H uang, 1 99 1 ) d omestic environmental m icro organisms were genera l ly categorized into bacterial and fungal groups . A] B a cteria were conveniently d ivided i nto 5 groups a s fol l ows: i) G ram positive cocci . ii) G ram positive baci l l i . iii) Gra m n egative cocci . iv) Gra m negative baci l l i . v) Gra m negative d i pl ococci . 25 8] Fungal s pecies of domestic ind oor a i r have been identified as:- Aspergillus, Alternaria, Cladosporium, Penicillium, Curva la ria, Mucor and Helminthosporium. The benefits of estimating the types and numbers of microorgan i sms i n Domestic enviro nment includes; [a ] Estab li s h i ng the types of m icroorganisms i n homes environment . [ b] I d e ntifyi ng the pathogen i c and a l lergen i c organism which occupies the home environment. [c] Evaluating the sanitation of homes. [d ] Estimation the environmental factors affecting the presence of microorganisms i n homes [e ] D etermi n i ng the rel ationship between the home social strata and the m icro-organisms present . 26 1.1 1 Sick Buil ding Syndrome (SBS) I n 1 982 the World H ea lth Organization recognized the "sick build ing syndrome" a s a m a l ady affecti ng a proportion of people in certa i n problem bui l d i ngs. The indicators that a bui l d i ng may be sick usual ly are increased staff complaints of minor health symptoms, stuffy a i r, i nterm ittent odors, and visi ble i ncreases i n d u st l evels. Othe r factors m a y be uneven temperature zones, noticeab l e smoke accu m u l ation, and d i rt coming out of air supply d iffusers. M anagement may be aware of increased staff a bsenteeism and red u ced productivity. The symptoms that affected people are usual l y groups of al most trivial problems such as eye , nose and throat, i rritation; headache, rhi n itis and sinusitis with skin irritation; cough , shortness of breath, and general lassitude; and d izzi ness, n ausea and mental confusion. The study of sick b u i l d i ng synd rome i s o n goi ng, and as method s conti nue to be d eveloped, more wi l l be learned about the true role of microbes and their products in the problem (Binnie, 1 99 1 ) . 27 2 MATERIALS AND METHOD This project was carried out at AI-Ain city. AI-Ain city is l ocated i n the eastern province of Abu-D h a bi Emirate, in the UAE. The population consists of nationals and a heterogeneous expatriate population from d ifferent parts of the worl d . The most recent estimated population of AI-A i n , accord i ng to the M i nistry of Health Annual Report, ( 1 992) i s 270. 800 (male female = = 1 62 . 900 and 1 07.900) . 2.1 Sources of Material f or Study 2.1 .1 Hospital Environmental Study: AI Ain has three hospita ls serving the above population. The hospital environmental study was conducted at AI-Ain Hospital which i s the largest ( 5 1 1 bed) institution with 2 3 wards that cover all standard i npatient and several out-patient faci lities. It is 1 4 years old and serves both the national and expatriate resident population of AI-Ain M ed ical D i strict and is l ocated at the center of AI-Ain city. 28 The study samples were col lected from the fol lowing hospita l units: Male surgical ward Female surgical ward M a l e med i cal ward Female medi cal ward Ped iatrics ward O perating theater I ntensive care unit 29 �I j= Ii:]I "J,'II '\,� 1- II I,! n -- -- -1 ----- 1-- \\ Figure 1- A Map of AI-Ain City 30 I Ir: 4 1 " A= T)pe I houses B=- TlI)C II houses C=T)pc III houses 11= lIosl,ital / Figure 2 Map of AI-Ain city showing tha location of AI-Ain Hospital and location of homes studed 31 M icrobiological sample were taken from a l l of these areas as descri bed later. Each ward was represented by five rooms. The rooms are usually d ivided i nto four partitions separated by curta ins. Each room has a capacity of four patients . During the sampl i ng procedure all the curtai n s were o pened so that the whole room cou ld be sam pled as a unit. The i ntensive care unit con s i sted of three rooms, with three patients capacity. Sampl i ng was aga in carried out i n a l l the three room s . The operating theater consisted of three operation rooms and two pre and post operative preparation and recovery room s . S a m p l ing was done i n a l l rooms when no surgica l activity was ta ki ng place . 2. 1 . 2 D omestic environmental study: Three types of dwe l l ing houses i n AI-Ai n city were selected. They were graded on basis of differences in social econom ic status of the occupants; the area where the houses were located, thei r architectural design, and thei r sanitary con d itions. 32 Houses were classified as fol lows: Type 1 = Very good quality houses Type 2 = Average quality houses Type 3 = Poor q u a l ity houses Type 1 Consisted of very spacious newly built and wel l d esigned villas. They were located in the up market area of the city . A l l residents h a d h igh i ncome a n d social strata ( accord ing t o local gra d i ng) . Type 2 were homes b u i lt accord i ng to the traditional loca l design, they were b u i lt by the government for nationals of med ium i ncom e . These residances are in groups which are very close to each other and are trad itional fol k areas. Type 3 represent poor houses bordering on slums. Each was a s i ngle room or more but d id not exceed three rooms a l l which were b u i lt at ran d o m . These shelters are inhabited by the poor low i ncome expatriate population usually at more than three i n d ividals per roo m . 33 F i g ure 3 Photograph of AI-Ain Hospital F igure 4 Photograp h representing a ward-room inside the hospital 35 Figure 5 Outside views of a very g ood house (lype 1 ) 36 F igure 6 I nside views of a very good house (type 1 ) 37 Figure 7 Outside views of a medium quality house (type 2) 38 Figure 8 Inside views of a medium quality house (type 2) 39 Figure 9 Outside views of a poor quality house (type 3) L .J Figure 10 Inside views of a poor quality house (type 3) 2. 2 SAMPLING TECHNIQUES 2. 2.1 Air Sampl es Two air sampling techniques were com pared for use in th is study. These were d irect open agar plate exposure technique and bacteria mechanical air sampler, M K2 (Casella Londo n ) . a This Pl ate Exposure Technique method a l l ows airborne m icro-org anisms to be deposited on to blood agar plates exposed to room air for defi nite periods of t i m e . Plates were located in the m i d d l e of the room away from opened windows or d oors , and about 1 meter above the floor. After that the covers are re placed and plates were then incubated at 370C for 48 hours after which the colony form ing units ( C F U ) were counted . b D etermination of optimum plate exposure time Three blood agar p l ates were exposed i n the center of the room, open and faci ng upward s . The first plate was exposed for 5 m i n utes and closed , the second plate running 42 a long with the first was exposed for 30 minutes and the third plate was exposed for as long as 60 minutes. proced ure was repeated i n five d ifferent rooms . This A l l the plates were incubated aerobica l ly at 370C for 48 hours and CFU were counted and identified . Tabl e 1 shows that the mean count of C F U per room increases with time of exposure . At 30 minutes exposure the number of C F U was 6 folds higher than at 5 mi nutes. This was proportional to the time of exposure i n d i cating approximately 2 C FU/min. Longer exposures u p to 60 mi nutes d id not produce s i g n ificant d ifference . Therefore 30 mi n utes exposure time was selected for further stu d i e s . c Mec h anical Bac terial Air Sampl er MK2 The orig inal i nstrument used was developed by D rs . Bourd i l lon Lidwe l l and Thomas of the Medical Research Council ( I nstruction l eaflet 3 1 09/79 bacteria sampler 2 ) . 43 The air being sampled is d rawn at high speed through a narrow s l it at a control led rate ; the plate i s 0.2 cm below the slit. The surface of the agar plate col lects the airborne bacteria and fungi which , because of the high velocity, are caught on the moi st agar surface . During sampl ing , the plate is rotated under the s l it to evenly d i stri bute the colonies. The blood agar plate had an inside d iameter of 8.5 cm and outside d i ameter 9 cm. The machine can be set for three d ifferent times: 30 seconds which re presents 15 l itres of a i r, 2 minutes representing 60 l itres of air, and 5 minutes representing 150 l itres of a i r. To determine the optimum time for the a i r samples, a comparison of the total number of C F U col lected at these three different times in the same room was recorded . It was repeated in five d ifferent rooms in the hospital. For each sample the mach i ne was located in the center of the room away from opened windows and doors , and sampling position was 1 metre from the floor. 44 Figure 11 P late exposure culture method . 45 I 3 46 I 17 I 23 1 Room 5 I 33 13 2 Room 4 Mean 14 29 6 Room 3 22 39 9 7 1 Room 2 15 13 l cfu/60 m i n 5 cfu/30 m in Room 1 cfu/5 m i n Total n u m ber of cfu time u s ing p late A ir Exposure method The t otal number o f cfu o n Blood Ager at D ifferent R O O M NU M B E R Table 1 ': Figure 12 •• ., ' • #' � .' ' .. -. -. Mechanical air sampler (Casella Bacterial Air Sampler MK2) �7 . \ ., , d D eter mination of Optimum Time Requir ed f or Mech anical Air Sampl er Tabl e 2 shows the result of d ifferent samp l i n g time using the machine air sampler for d ifferent rooms. It shows that 15 l itres of a i r produced a mea n of 89 C F U , 60 I itres produced a mean of 359 C F U , and 1 50 I itres had a mean count of 755 C F U . The types of C F U col lected increased with the rise of amount of a i r sucked . F o r exampl e , when 15 l itres o f air were sampled only one or two types of bacteria g roups were isolated but when 60 l itres were samp l e d , five to six types were isolated , and when 150 l itres were taken, e i g ht types of bacterial g roups were isolated . Therefore 150 l itres or 5 minute sampling was chosen as it g ave the h i g hest cou ntable numbers and larger selection of microbial isolates. Tabl e 3 shows a comparison between the p l ate exposure method and the mechanical bacteria air sampler. It shows that the d ifferences between the two methods is only in the n umber of colonies col lected by each method and not i n the types of micro organisms identifi e d . P l ate exposure method col lected a mean of 48 50 colonies per 5 minutes, whi l e the machine col lected a mean of 475 1 colonies per 0. 15 m3 / five minutes, equivalent to 1000 C F U per m 3 i n five m i n utes , in the hospital environment. That reflects the efficiency of the machine which col lected amount of colonies easily converted to s pace and time and taking less time compared with p l ate exposure method . 49 I 50 89 I 40 Room S I 1 07 13 Room 4 M ea n 60 1 73 Room 3 359 987 293 60 Room 2 347 1 60 Room 1 I 755 273 1 93 1 707 840 760 ( ::::: 60L A ir) (::::: 1 50L A ir) (::::: 1 5 L A i r) c fu/5 m i n c fu/2 m i n c fu/3 0 s e c t ime u s i ng Machanical bacterial air sampler The total num ber o f c fu o n Blood Age r at D ifferen t R O O M NU M B E R Table 2 I , 1384 329 15 240 823 96 18 17 475 1 21 4 1 3 5 1 14 50 Staphylococcus (eNS) Micrococcus species Streptococci (alpha haemolytic) D iphtheroid bacilli Bacillus species Streptomyces species Unide n t i fied bacteria TOTA L 51 47 1 < Total No. o f cfu/one M 3 u s ing A ir sampler Staphylococcus au reus ORGANISMS Total No. of c fu/30 m in exposure ( M ea n cou n t s p e r h os p i t a l wa r d ) M icro-organisms isolated by exposure method compared with micro-organ isms i s olated by A i r sampler TYPES OF Ta b l e 3 I 2 . 2 . 2 Surf ac e Sampl ing I n each room a test area was selected for surface samples. Scm 2 were selected from large flat nonabsorbent surfaces such as tables or cabinets; two samples were ccollected from each room. A swa b was moistered with steri le distilled water and used to swab the selected surface. The swabs were streaked on b l ood agar plate and incubated for 48 hours at 37 o C. The total number of CFU were counted and the types of bacteria were identified (Macher and Huang, 1991 ) . 2.3 Cul ture Media The followi ng bacteriolog i cal and mycolog ical med ia were used for isolation and identification of bacterial and fungal m i cro-org anisms: Try pticase soy agar base ( B B L microbiology system) and sheep blood sup p lement for bacteriological isolation. Sabouraud Dextrose agar (BBL microbiology system) for iso l ation of moulds and yeasts. Sucrose mineral agar (Czpel-DOX) for moulds identification. 52 Mannitol salt agar ( Oxoid C M 85) selective med ium for the identification of presumptive pathogenic staphylococci. M acconkey agar without salt-(MAST d iagnostics) selective med ium for d ifferentiation of g ram negative Bacilli. Mueller H inton Agar for sensitivity test. The cultures were incubated for 48 hours at 370C for bacteria and for 7 d ays at 250C for fun g i . The C F U were enumerated using Gallen Kamp colony counter and numbers were converted to m icro-organisms per cubic meter of air. 2.4 Identif ication T ech niques 2.4.1 Bacterial Identif ication Bacterial colonies were i n itially characterized by colon i al morphology and m icroscopic exam ination of Grams stai ned smear. Further identification using oxidase, catalase, coagulase, A P I 2 0 S , A P I 20 E for E ntenobacteriaceae, and API 20 NE for non fermenting Gram negative Bacilli. Some bacteria were identified accord ing to Cowan and Steel's ( 1 974) manual for the identification of med ical 53 bacteria , and Identification methods in applied and environmental microbiolog y ( 1 992) , Accord ing to a l l above methods, organisms were classified i nto n i ne g roups as follows: 1 Staphylococcus a ureus; for all Gram positive cocci , that were catalase positive and coagulase positive. 2 Coag ulase Negative Staph yl ococci ( e NS) ; for all catalase positive, coagulase negative g ra m positive cocci in clusters . 3 Micr ococcus species; for all strictly aerobic, catalase positive large Gram positive cocci . 4 Str eptococcus species (al pha h aemolytic) ; for all alpha haemolytic, catalase negative g ram positive cocci in chai n s . 5 D ipth er oid bacil l i; negative, non-spore for all forming basica l ly irregular formation. 54 catalase g ram positive , positive oxidase rods with 6 G ram neg ati ve b ac i l l i : This g roup included a l l Gram negative rods which were either Enterobacteriaca and identified by A P I 20E, and non fermenting g ro u p which were identified by A P I 20 N E . 7 Bac i l l us speci es: This g roups included all the large spore forming Gram positive rods with several d ifferent colony m orpholog ical characters (roug h , smooth , muco i d ) . 8 Streptomyc es spec i es were all the slow g rowin g , roug h , toug h colonies adherent t o the med ium with earthy odour. Gram stai n showed g ram positive filaments bacteria . 9 U ni dentifi ed b acteri a: This covers all other org a n isms, not i ncluded i n any of the group above. These were generally sma l l colonies that were not characteristic of known human associated organisms. The majority were large Gram negative cocci, some gram positive rod s and g ram negative rods. All these were negative to all identification tests used to screen the other organisms. 55 2.4. 2 F ungal identif ication Fung al colon ies were identified by colony a ppearance and m i croscopic examination of the spore and hypha I characteristics on lactophenol cotton blue, scotch tape mounts or slide culture where the tape mounts were inconclusive. These were identified accord ing to the manual of soil fung i (Gillman, 1 957), and Soil fun g i in qatar and other arab countries ( M oubasher, 1 993). 2.5 Sensitivity T est The D i s k-plate technique was used . I n this method a bacterial colony was d i s persed i n five millil iters of sterile broth , then a sterile cotton swab was used to i noculate the surface of M ueller H i nton Agar P l ate. After that the a nti biotics were added . The plate was incubated at 37 DC for 24 hours . Sensitivity test were performed usi n g sixty Coagulase negative staphylococci o btai ned from three d ifferent sources (hospital environment, d omestic environment and 56 patient's ) . Patient stra i ns were isolated from s ki n swabs of hospital patient. commonly All strains were tasted against seven used Anti biotics (Penicillin , Ampicillin , Aug mentin, Cephalothi n , Erythromycin , Tetracyclin and Gentamicin). 2.6 Data processing , Statistical meth ods and anal ysis The variables were coded , and all the d ata entered and pro cessed i n the Department of Community Med icine, Faculty of Med i cine and Health Science at the UAE U n i versity . Data entry was done by using DOS-5 ed itor. The statistical software packages S P S S (Norusis , 1992) and B M DP (B M D P , stati stical analysi s . 1 992) were used for performing Harvard Graphics (H G VER 3 . 0) package was used for graph i n g . Basic statistics, frequency table, one way and two way tabulations were obtai ned . Tests of s i g n ificance were performed using the chi-square test for two or more categorical variables . I n 2 x 2 tables , the F isher exact test 57 sample size was small. The significance of d ifference between two continuous variables were determined by students t-test. Also, the two ways Anova model was performed to explore the joint effects of variables . Means P-Iess or equal to 0 . 05 were considered as the cut-off value for s i g nifi cance. 58 Figure 13 Culture plate after 48 hours incubation time showing bacteria and fungi using plate exposure method for 30 min exposur time. 59 F igure 1 4 Fung al identification using g ross colonial ap pearance 1. 2. Aspergillus niger Aspergillus fumigatus 60 Figure 15 Fungal identification, microscopic examination . 12- Alternaria species A spergillus niger 61 -( • " , F i g ure 1 6 Various unidentified bacteria 62 CHAPTER III ........... .... ... .............. .. ..----- RESULTS The main results of the study for the bacterial and fung a l counts for both hospital and d i fferent homes are shown in tables 4-1 6 These ta bles a lso contai n data for surface samples counts. Tabl e 4 and f ig ure 1 7 shows hospital micro-org anisms isolated from five d ifferent wards in AI Ain hospita l . The results reflect the mean of five rooms in each ward . There were n ine groups of bacteri a l in addition to the fungi isolates . These n i ne g roups were d ivided i n to two g roups ; the human related micro organisms represented by the first six g roups and the enviro nmenta l and soi l micro-org a nisms represented by three rem a i n i ng g roups . The most l a rgest quantities of micro-organisms were the unidentified bacteria . This g roup i ncluded different types of bacteria which are not known to be related to med ical m i crobes , difficult to identify, and were possibly soil and ai rborne bacteria . The second commonest org anism occurri ng i n a l l ward u n its was 63 and Micrococcus species. All other micro-organisms were detected in small numbers . It was generally observed that ped iatric and female medical wards had the h i ghest bacterial count while the surg ical wards had the lowest. The fungal colony counts were close i n all ward s . I n general male ward s had less bacterial count compared with female ward s . The classical pathogen ic Staphylococcus aureus a n d the E nterobacteriacae g roup were rarely isolated . S aureus was more common in ped i atrics and female surg ical wards compared to other ward s . The g ram neg ative rod s which were isolated from ped iatric, male med ical and female surgical wards included several genera and s pecies such as Pseudomonas species, Enterobacter species, vu/neris. pathogens. A eromonas species, and Esherichia Some of these are known to be occasional human The total fun g al isolates are included to g ive a com plete picture but will be presented separately later. 64 I I 13 153 13 100 0 53 33 87 13 Micrococcus species Streptococci (alpha haemolytic) D iphtheroid bacilli Gram negat ive bac i ll i Key: FSW MMW = Female surgical ward, B AED MSW = 6S Pediauic ward. Male surgical ward, FMW = 701 3 2 20 5 3479 Male medical ward, 180 13 3 15 3 Fungi = 2887 873 1673 Unidentified bacte ria TOTAL 73 220 53 0 Streptomyces species 7 1 93 73 2200 13 3 24696 706 9086 479 4 1 13 86 60 1440 1200 73 1959 692 1 73 TOTA L 347 27 927 195 3 33 PA E D Female medical ward, 4806 167 145 3 10 13 1040 0 393 0 373 1307 25 3 453 1947 27 F.S . W. M3 ) 367 = 273 627 1087 Staphylococci (eNS) Bacillus species 0 0 13 Staphylococcus aures 0 M.S.W. F. M . W. (No. o f c fu/one ( F i g u res a re mea n s of 5 roo ms / wa rd) using a i r sam pler H ospital A ir m i cro-organ isms isolated from five ward M.M.W O R G A N IS M S T Y PE S O F Table 4 Z ::J E QI .0 '- 0 � lL () ..... o 500 1 000 1 5 00 2000 2500 3000 = Sta p h . (CNS) = U n id e n t i fied bacteri a Colonis F o rm i n g U n i t s U . bact e ri a CFU U . b a ct e ri a I I I I I I I I I.. I I I Bacillus spp 66 / / / / M icrococcus s p p / / / D i p h t h eroid baci l l i / F i g ( 1 7) C o m pa r i n g H o s p i t a l a i r m i c ro-o rg a n i s m s i s o l ated fro m f i ve w a rd s u s i n g a i r sa m p l e r D PA E D ml F . S . W . IIII F . M . W . D M . S W. OO M . M . W. Ta b l e 5 shows m icro-org an isms i so l ated from three different types of houses. Except for S. aureus, wh ich was not iso l ated , the same groups of bacteria l and fungi isolated from hospital environment were found a lso i n d omestic air samples. The most common m icro-organism was again, un identified bacteria fol l owed by Bacillus species. In third position in a l l house types was the coag ulase negative staphylococci. The types of Gram negative rods isolated from d ifferent house types included Pseudomonas vesicularis and other Pseudomonas species, not known as human pathogens. The most i mportant observation was the sign ificant d ifferences between the three types of houses, in other word s , the l ower the type of houses the higher the number of bacterial counts were ( p<O.04S). 67 3050 2470 0 1 20 4 3733 893 4909 273 1 5452 2 1 07 987 74 12 230 21 17 5 37 3 807 260 10131 734 1 89 7 17 1 84 1 95 0 390 2000 217 5688 Staphylococci (eNS) Micrococcus species Strep tococci (alpha haemolyt ic) Gram negative bac illi D iphtheroid bacilli Bacillus species Streptomyces species Unidentified bacteria Fungi TOTAL 68 T Y PE 3 T P Y E O F H O US E S TYPE 2 O RG A N I S M S T Y P ES O F ( F i gu res a re mea n o r 5 h o u ses ro r ea c h type, v a l u es rep resen t c ru/m 3 ) Domestic A i r m ic ro-organisms iso lated from three types o f houses TYPE 1 Tabl e 5 T a b l e 6 shows the counts and the d i stri bution of micro organisms i n l iving rooms and bedrooms in the three d ifferent types of houses. I n the best q u a l ity houses ( type 1 ) , there were more m icro-organisms in bedrooms than in l iving rooms for three out of four human associated bacteri a l agents, the opposite was noted for the non human m icro-organisms. In type 2 (middle class) houses and type 3 ( poor class) coag ul ase negative Staphylococci counts were h ig her i n bed rooms than l iving rooms whi l e the counts of M i crococci, Oiphtheroid bacilli and Gram negative baci l l i were h i gher i n l iving rooms than bedrooms. However there was no s i g n ificant d ifferences between l iving rooms and bedrooms for any of the organi sms isolated. I n a l l types o f houses a l l the e nvironmenta l (non human related) bacterial counts were h i g her i n l iving rooms than the bedrooms and the d ifferences between these houses were not significant. In concl usion the total count of micro-organisms i solated from l iving rooms were h i g her than that isolated from bedrooms for all types of org a n i sms except for coag ul ase negative Staphylococci and al pha hemolytic streptococci , which were 69 hig her i n bedrooms i n a l l types of houses . There were significant differences between human micro-organisms and environmental micro-organisms in each room in the three d ifferent types of houses ( p<O.005). 70 - " ...... . , . .... ·.···.·u· , - ...................... ' ........... . .. . LR = L i v i n g Room Unidentified bacteria BR = , .. ...... BR LR .... .. .............. BR LR BR LR BR LR BR LR . 87 280 33 0 13 0 237 1 40 ., " 1 440 2460 ............. .. . . . . . . . . .. . . . . . . . ... ... . ... . ..... 800 667 T Y PE 1 . 1 13 327 1 367 2867 . .......... ........ . ......... ........... ... . 27 33 80 67 560 1413 2360 1 85 3 TYPE 2 360 420 447 627 BR LR 71 1 987 20 1 3 3460 4 1 53 . . . . . . . . ............................ ..... .... .. . . . ................ ...................... . ......... . ... ..... .......... .. ............ BR LR ........................... . . . . . . . . . ..... . . .......................... ................ . ............. . ........................ . ... . . . . . . . . . . . ... . ,--. . .. . ... . . B e d Room ................................ . ............ ....................................... .......................... . . Streptomyces species ............................................................ .................................................... Bacillus species o. ....... 0. ............ . . . . . ............................. . .......... . ............................... ........... ................... D iphtheroid bacilli .." .............. Gram negative bac illi . . ' . . . .. . . . . . . . . . . . . .... Streptococci (alpha haemolytic) Micrococcus species . . . . . . .,. . . . . . . .,. . . . . . . . . . . .' , . . . ........................, , .. BR LR (eNS) Staphylococci SOURCE 0 7 1 13 4 1 27 0 0 2 35 3 2587 3906 2 1 93 T Y PE 3 4380 5437 .................................... ..... . 753 1033 .. ................. , ........... ' ........ 3560 3906 . ........................................ TPYE O F HOUSES Domestic a i r m icro-organ isms iso lated from t hree types of house comparing l i ving rooms to bedrooms ( F i gu res a re mean o f 5 hou s es fo r each type, va l u es r e p resen t c fu /M 3 ) ORGANISMS Table 6 Tab l e 7 and figure 1 8 presents the numbers of six commonly encountered bacterial and fungal isolates for hospital air and the three d ifferent types of house. The total bacterial count of hospital air m icro-organisms was the lowest. It was s i g nificantly lower than type 2 and type 3 houses ( p<O.05). Coag u lase negative Staphylococci and Micrococcus species were s i g n ificantly h i g her i n the hospita l environment compared to type 1 houses only. For the environmenta l bacteria and fung i , the hospital had consistently lower counts and the number increased with the l owing of housing standard s . The greatest d i s parity occurred for a l l m icro-org a n i sms between hospital and type 3 house. The hospital had the l ower counts of a l l types of m icro org a n i sms except for Diphtheroid bacilli. The most common group of m icro-organisms were the u n i dentified bacteria . I n conclusion the hospital a i r m icrobial counts are com parable to house type 1 houses , representing very good qual ity houses. 72 390 2000 217 5664 96 1817 141 4893 Strep tomyces species Unidentified bacteria Fungi TOTAL 7 3733 21 17 1 950 823 Bacillus species 273 1 5332 1 0 045 4909 260 3 807 893 4 230 1 84 240 D iphtheroid bacilli 537 2470 987 1 89 392 M icrococcus species Staphylococci 3050 H OU S E TYPE 3 2 1 07 H O USE T Y P E 2 734 H O US E T Y PE 1 1 3 84 H O S PITA L ( F i g u r es a re mea n o f the n u m be r o f c fu/one M 3 ) M icro-organisms isolated from hospital env i ronment compared to m ic ro -organ is ms from the house env ironment collected us ing air samples (eNS) O R G ANISMS Table 7 z :J E (1) .0 '- ..... 0 ::::> LL () 0 500 1 00 0 1 50 0 2000 2500 3000 3500 4000 4500 5000 5500 6000 = / / / / B a ci l l u s s p p = U n id e n t i fi ed bact e ria C o l o n is Form i n g U n its U. bact e ri a CFU U . bact e ri a / 74 S t a p h . (CNS) M i crococcus spp � ------ ---�----��- -------�-- S H O U S E TYPE 3 . H O U S E TYPE 2 C H O U S E TYPE 1 m H O S P I TAL F i g ( 1 8) Co m p a r i n g m i c ro -o rg a n i s m s i so l at ed fro m h o s p i t a l a i r w i t h t h ree t y p e s of h o u se s Ta b l e 8 shows the s u rfaces micro-organisms isolated from d ifferent wards in the hospita l . There were seven bacterial groups, (Gram negative bacteria not tabulate d ) . Notably absent were S. aureus and a l pha hemolytic streptococci. Coag ulase negative Staphylococci were the most frequent micro-organism d etected on surfaces. This gro u p was the commonest in a l l hospital ward surfaces fol l owed by Bacillus species. It was observed that a smaller count of colonies was obtained in comparison to that from the a i r samples. However, the size of areas and methods used d iffered completely and CFU cou nts cannot be compare d . The medical wards had a higher total count for coagu lase negative Staphylococci and other human related m icro-org anisms than the surg ical counterparts. On the other hand the medica l wards had lower counts of environmental org an isms than the surg ical wards. Female wards had a hig her bacteri a l count compared with male ward s . Gram negative rods (not shown on table) were i solated from one female surg ical ward and one room in the male 75 med ical ward i n such a h i g h count that the particular site sampled was considered recently contam i n ated . These contaminations included , types of known to cause human infections such as Acinetobacter, Klebsiella pneumonia, Pseudomonas stutzeri and Pseudomonas putida . A very h i g h count of a l pha hemolytic stre ptococcus was obtained i n one room only in male surg ical ward . The d ifferences between human micro-organisms and environmental micro-organism s were s i g n ificant in female med ical and female surg ical wards (p<O.OS), and not sig nificant in male surg i ca l , male med ica l ward s , and ped i atrics wards . 76 4 13 3 80 Un identified bacteria TOTAL Key: = = M MW FSW Female surgical ward, Male medical ward, B AED = 0 1 0 Streptomyces species MSW 6 3 7 Bacillus species 77 Pediatric ward. Male surgical ward, FMW 81 5 3 13 D iphtheroid bacilli 40 3 1 Staphylococcus 1 63 F.M.W. Micrococcus species M .S.W. 19 = M.M.W = 320 69 50 Female medical ward, 33 8 5 3 51 31 14 1 88 TOTAL 2 20 5 4 30 PAED 0 15 5 5 20 F.S.W. ( N o . of c fu/ I O c m 2 s u r face a r e a ) ( F i gu res a re mean o f 5 rooms i n e a c h w a r d ) in Al A in Hospital S u rface m icro-organ isms isol ated from d i fferent wards 56 (eNS) ORGANISMS T Y PES O F Ta b l e 8 Ta b l e 9 shows the results of counts and types of s u riace m i c ro -o rg a n i s m s isolated from d i fferent houses . The numbers of micro-organisms increased with the decreasing status of house . The commonest org a n i s m i n a l l house types were Bacillus species fol l owed by coag u l ase negative Staphylococcus; Streptomyces and u n i d e ntified bacteria respectively. All other organisms were isolated in small q uantities. Ta b l e 10 and fig u re 19 compare surface micro-organisms isolated from the hospital and the three different types of houses. The hospital had the h i g hest count of coagulase negative Staphylococcus and Diphtheroid bacilli, and the lowest count of a l l other types o f org anisms. Type 3 houses had the hig hest count of environmental org anisms (Bacillus species, Streptomyces and u n i d e ntified bacteria). Although overal l surface count of bacteria in hos p ital is l ower, there is no s i g nificant d ifference with any type of houses. 78 8 0 19 1 15 0 16 2 7 57 Strep tococci (alpha haemolytic) Diphtheroid bacilli Bacillus species Strep tomyces species Unidentified bacteria TOTAL 79 27 8 2 Micrococcus species 61 8 6 17 14 Staphylococcus (eNS) 90 14 5 16 3 19 0 0 1 T Y PE 3 Staphylococcus aureus TPYE O F HOUSES 2 ( N o. o f cfu/cm ) T Y PE 2 ORGANISMS TYPES O F ( F i g u res a re mea n o f 5 houses fo r e ach t y p e ) M ic ro-organ isms isolated from s u rfaces in di fferent house types T Y PE 1 Table 9 16 4 Bacillus species 6 43 Unidentified bacteria TOTAL Streptomyces species S6 7 2 0 2 Diphtheroid bacilli 1 15 1 Streptococci (alpha haemolytic) < 2 1 Staphylococcus Micrococcus species 80 H O US E T Y PE 1 14 H OS P I T A L 61 8 1 19 0 8 8 17 H O USE TYPE 2 ( N o . of c fu / l O c m 2 s u r face a r ea) M i c ro-organ i sms isolated from hospi t a l su rfaces compared with those from di fferent house types 29 (eNS) ORGANISMS TYPES OF Ta b le 1 0 1 90 14 5 27 < 16 3 19 H O US E T Y P E 3 I Z ::J E Q) ..a '- 0 '+- � LL 0 o 5 10 15 20 25 30 = ��� ta� �;,�9.. = � J : I il, ':" : i" .,:::::::, U n i d e n tified b a ct e ri a C o l o n i s F o rm i n g U n it s U . b a cteria CFU ��r� tm;j- '�f �' �: 1 filii •• ��: m� ;m; r,,:�... .'..4','.1:'.'. �;�:�: f�J 81 StreptococCi ..' ::: ·�t\· · ::, , ;�' "I '. U . bact e r i a • �{t� ITl H O U S E TYP E 3 IlII H O U S E TYP E 2 C H O U S E TY P E 1 rrE H O S P ITAL F i g ( 1 9) C o m p a r i n g m i c ro-o rg a n i s m s i s o lated fro m h o s p it a l s u rfaces w i t h t h o se f ro m d i fferent h o u se s s u rfaces Ta b l e 11 shows the result of the observation in the cleanest area in the hospita l ; the I ntensive Care U nit and the O perating Theater (OT) . I n air samples ICU collected a mean of (687 C F U/M 3 ) per room, most of which were coagu lase negative Staphylococci . In the OT a mean of (473 C F U/M 3 ) per room were col lected , nearly half of which were Micrococcus species. I n both areas, the human related organisms exceed ed environmental org a n i s m s . For surface samples, significant d ifferences between human related micro-organisms and e nvironm ental micro org a n i sms i n OT (pv O . 05) I C U col lected a mean of 2 5 colonies = per roo m , 24 of which were coag ulase negative Staphylococcus, wh i l e i n OT a mean of 4 colonies per room was col l ected . OT has the l owest count of surface and air m icro-org a n i sms fol l owed by I C U com pared with any hospital ward . In concl usion both the I C U a n d O T had s i g nificantly more human related m icro-organisms in a i r ( p < O . 005). 82 Ta b l e 1 2 shows a 2x2 comparison figures of air agai nst surface micro-organisms i n hospital and the d ifferent types of house s . Although the surface organisms were much lower, usually under 1 % of the a i rborne q uantity, they were generally proportional to the quantity i n the air. This strongly suggests that the surface organ isms ori g i n ate from the a i r rather han from other sources . 83 I = 687 TOTAL OT 0 27 Fungi Intensive Care Unit, 13 0 Unidentified bacteria = 47 7 Strep tomyces species rcu 93 53 Bacillus species Key : 33 0 D iphtheroid bacilli 84 Operating Theater, 473 0 7 0 Strep tococci (alpha haemo lyt ic) 2S 0 0 0 0 1 0 200 80 Micrococcus species 24 80 leU 4 0 0 1 1 0 0 1 1 OT 1 OT I ICU S U R FACE S A M PLES No. of cfu/ l O cm 2 A I R S A M PLES N o . of c fu/M 3 520 ORG ANISMS TYPES OF - ( F i g u res a re mea n of 5 rooms i n each a re a ) Intensive Care Unit and Ope rating Theater M icro-organ isms isolated from a i r and su rface s am ples Staphylococcus (CNS) _ . - Table 1 1 I The n wn be rs are the mean out of Unident ified bacteria Bacillus species Micrococcus species : Staphylococcus (eNS) O R G A N IS M S T Y P ES O F Table 1 2 5 isolation in each case. S urface Air S urface Air S urface 85 1 8 17 6 2000 7 1 950 16 392 1 Air 823 4 1 89 2 l 384 29 Air S urface 734 14 H O S PI T A L SOURCE H O US E T Y P E and the three types o f houses 1 2 ) 3807 8 2 1 17 19 987 8 2 1 07 17 HOUSE TYPE 2 c fu/ l O c m m i c ro -organisms isolated from hospital Total n u mbe rs o f a i r (cfu!M 3 ) and su rface ( 4909 14 3733 27 2470 3 3050 19 H OUSE TYPE J Ta b l e 13 shows the quantity of fungal spores found in hospital a i r. It i s assumed that each fungal colony ori g inated from a s i n g l e aeri a l fun g a l spore . There were five genera of fungi isolated with a predomi nance of A spergillus species. Asperg i l l us species were isolated . were the most d o m i n ant. A. fumigatus and Six A. niger There was no sign ificant d ifference in the total number of isolates from d ifferent hospital units. Ta b l e 14 g ives the fungal isolates from the d ifferent types of homes. There were six g enera and seven species of Asperg i l l i represent approximate l y 7 5 % of a l l isolates . A . niger was the most common than any other Asperg i l lus species depending on there total counts as wel l as the number of there isolation comparing to other g e nera . There was an i ncrease of fungal isolates with the l owerin g of housing standard s ; concerni ng A. niger, Alternaria and chaetomi u m but not with other fungal speci es, which were i rre g u larly isolated . 86 i I I I 25 15 9 A . Jumigatus (Frese n i u s ) 0 0 1 0 Penicillium species Verticillum species = = = = = MMW MSW FMW FSW B AED Pediatric ward. Female surgical ward, Female medical ward, Male surgical ward, Male medical ward, 11 11 Chaetomium species 38 4 0 A . versicolor (Tirabosh i ) 31 9 0 4 A. terreus (Thorn & R ap per) TOTAL 5 0 0 A. tamarii (Kite) 87 48 0 0 4 0 0 0 1 A. sparsus (Thorn & Rapper) 5 4 1 A . n iger ( V an Tieghem) Key: I 34 23 16 Aspergillus species 0 4 4 A lternaria species F.M.W. I 45 4 0 0 1 7 9 4 16 0 37 4 F.S.W. I ( No . o f col o n i es/M 3 a i r ) M .S . W. - from five ward u s ing a i r samp ler * I 1 73 4 10 27 6 16 9 5 30 53 119 13 TOTAL I = = = M L = H O.R *25 of I Low Occurrence less than 5 . Moderate Occ urrence 5-9, L L M M M L L H H - M O.R H igh Occurrence more than 1 0, Occurrence Remark, 2 4 7 7 8 1 2 10 17 - 8 out of No. isolation 25 is t h e n u m be r of isol a ts 12 0 0 1 1 0 0 0 4 4 9 1 PAED The most dom inant fu ngi in hosp i t a l a i r isolated M.M.W O RGANISMS - -- Table 1 3 I , 0 548 0 1 53 0 0 0 0 53 0 1 13 0 0 366 33 80 33 33 46 0 20 0 0 47 13 305 A . flavus (Rapper & Fennel) A . n iger (Van Tieghern) A . sparsus (Thorn & Rapper) A . tamarii (Kite) A. versicolor (Tiraboshi) Mucor species Penicillium species Trichoderma species Verticillum species TOTAL Chaetomium species 88 53 0 0 A . fum igatus (Fre sen i u s ) A . terreus (Thorn & Rapper) 327 1 53 225 Aspergillus species 5 0 7 5 1 80 7 7 M L L L L M L M L H L L - M O.R Key: == == M L = = H O.R I 5-9, Low Occurrence less than Moderate OccWTence 5. High Occurrence more than 1 0 , Occurre nce Remark. * 1 5 i s t h e n u m be r o f isol a ts 1 6 1 27 0 2 1 0 15 1 2 3 - 6 out of * 1 5 isol ation No. o f 240 0 1 27 47 0 A lternaria species T Y PE 3 T P Y E O F H O U S ES ( N o . o f co ion ies/M 3 a i r ) T Y PE 2 ORGANISMS TYPES O F A ir-borne fun g i iso lated from three types o f houses T Y PE 1 _ . _ - Ta b l e 1 4 Tab l e 1 5 com paring AI Ain hospital fungal isolates to those of the 3 types of houses, l i ke bacterial isolates, the hospital had l ower total fungal counts compared to the domestic environment. Although there was no significant d ifference between hospital and type 1 and 2 houses the d ifference was significant for type 3 house. I n tota l there were seven genera of fun g i isolated i n the i ndoor environment of hospital and homes. Chaetomium were the most constantly found A. in niger and all areas i nvestigated . Tab l e 1 6 shows anti biotics sensitivity test for sixty coa g ul ase neg atives staphylococci ( e N S ) obtained from three d ifferent sources. Twenty were from domestic areas, twenty from hosp ital environment, and twenty from hospital patients. They were tested against seven commonly used anti m icro b i a l agents l i sted in the table. The results are expressed as a percentage of org a n i s m s sensitive to the dru g . 89 The domestic e N S were highly sensitive to the seven drugs (mean sensitivity of 93%) and completely sensitive ( 1 00%) to five of the d rug s . The hospital environmental e N S were 1 00% sensitive to gentamicin only and moderately sensitive to five d ru g s but genera l ly resistant to erythromyci n . I n contrast t o the e N S , isolates from patients' specimen were eval u ated s i m u ltaneously. These strains were less sensitive than even the hospital environmental e rythromyci n and tetracycl i n e . organisms except for There was a very s i g n ificant d ifference between sensitivity of patients' strains and hospital strains for penici l l i n and ampici l l i n but not for augmenti n . There was a moderate d ifference with cephalothi n and g entamici n . T h e overa l l analysis shows that t h e resistance o f hospita l environmental strains were i n between the d o mestic and the patients' strains. 90 - - 1 13 0 0 0 46 7 33 46 20 0 0 53 9 16 5 7 7 4 A. jumigatus (Fresenius) A . tamarit' (K ite) A. terreus (Thorn & Rapper) A . sparsus (Thorn & Rapper) A . versicolor (Tiraboshi) Chaetomium species Penicillium species 305 2 1 73 Verticil/urn species The n wnbers are the mean out of isolation in each case. l3 - Trichoderma species TOTAL 47 - Mucor species 91 0 80 30 A . n iger (Van Tieghem) 5 0 225 1 19 Aspergillus species 366 0 53 0 0 0 153 1 53 47 0 H O US E T Y P E 2 ( N o . of co i o n i es/M 3 a i r ) - 13 -- A lternaria species - n O US E T Y P E 1 ORG ANISMS TYPES OF � A i r Fungi isolated from hospital and three types o f houses H OS PIT A L -- Table 1 5 548 0 0 7 7 80 27 0 0 7 53 240 327 1 27 H O US E T Y PE 3 II I K ey: Amp Ery = Erythromyc i n , Tet = = Tetracyclice, A mpici l l i n , Gen Aug = = 92 Gentamici n. A ugmemi n , 89 74 65 M ean Pen ic i l l in , 82 42 20 Patients = 85 80 75 Hospital Pen 1 00 1 00 1 00 1 00 Domestic Cep = 92 82 95 Cep. A u g. Amp. Pen. A REAS AND PATIENTS Ceph alothin, 46 50 35 55 E ry. STAPHY LOCOCCI I SOLA TED FROM DIFFERENT SENS ITIVITY P AITERN OF COAGULAS E NEGATIVE S o u rce o f C N S Table 1 6 72 60 60 95 Tel. 96 89 1 00 1 00 Gen. 76 60 75 93 Mean I CHAPTER IV DISCUSSION I ndoor air contai n s a large micro b i a l popul ation. The s i g nificance of these microbes is d e batable in some q uarters, whereas e lsewhere it is considered s i g n ificant. The i mportance of the estimation of the numbers and types of a i rborne m i cro organisms is that it m i g ht be used as an i nd ex for the cleanliness of the environment (Wi l l iam et al. , 1 956). Although work elsewhere has shown what is expected i n hospita l s , there is very l ittl e i n the l iterature on d om estic microbial flora . This study therefore is new as far as this area i s concerned , particularly so, i n the Gulf States. In order to evaluate the qual ity of the a i r in the hospita l , and to fi nd the relationsh i p between the bacterial count and the enviro nmental cond ition, a compari son between the hospital and the three types of houses were carried out. 93 A irborne i nfections particularly of the respiratory nature in domestic areas common. and in crowded con d itions are extremely Airborne spread of nosocomial bacteria l or viral i nfection i s known to occur, but is probably uncommon , therefore a i r sampling should be carried out less freq uently. P erhaps the most common and recent indications for use of this technique have i nvolved Legionella and Asperigil/us i nfections and in monitorin g o f o perating room infections. Air samp l i ng may be performed with either sett l i n g plates or by using more sophisticated equi pment. P l ate exposure method is one of the s i mplest methods used for air exami natio n . I t has been recommended for the quantitative evaluation of airborne bacteria , however, it col lects mainly those particles larg e enough to be pul led by gravity or impacted by air turbu lence onto the col lecting surface ( Herman and More l l i , 1 96 1 ; Wolf et a/. , 1 964) . For these reasons airborne particles that are too s m a l l to settle out q uickly may n ot be col lected . Add itiona l l y if the turbulence of the a i r to be sampled varies from time to time, the y i e l d s of the exposure plate wi l l a l so vary (Cole and Bernard , 1 96 2 ) . Although 94 this i s an i nexpensive way to evaluate airborne micro b i a l conta m i n ation, q uantitative resu lts may correlate poorly with those o btai ned with mechanica l volumetric air samplers . B ecause of variation i n particle size and unknown influences of air turbul e nce , nucle i of a pproximately three micro meter can remain suspended indefin itely and can only be col lected with h i g h-vel ocity, volumetric a i r samp l ers . Although Sayer et a/. ( 1 972) have reported that Gravity S ett l i ng C ulture (GSC) P late should not be used for quantitative estimation of hospital airborne bacteri al flora , plate exposure method was used i n this study to evaluate the efficiency of the bacterial a i r sampler which was being used for the first time i n the AI-Ain study. The comparison between the two methods shown in table three shows that plate exposure method for 30 m i nutes col l ected a total of 50 CFU against 4750 col lected by the mechanical a i r sampler in five mi nutes: this is just over one percent efficiency as far as quantity is concerned . Furthermore qual itatively the same types of micro-organisms were col lected by the mach i n e in five m i n utes sampling time as by plate exposure 95 method i n 30 m i n utes. We can quantitate the micro-organisms of the bacteri a l a i r sampler as 0. 1 5 m 3 per 5 m inutes whereas the plate exposure method cannot be estimated i n terms of air volume. For this reason the superior mechanical air sampler (Casella bacteria sampler MK2) was chosen. Although there a re several types whi ch are more convenient, we used Case l l a bacteria sampler M K2 which was avai lable t o u s . Sayer et al. (1 972) reported that airborne Staphylococcus aureus was d etected i n hospital by the Andersen sampler but not by the accompanying GSC plate. In this study however, the plate exposure method collected only 2 colonies of S aureus, and a mean of 2 1 colonies of coagulase negative staphylococcus per room . Thi s find i n g i s i n l i ne with H a l l ' s fi n d i n g s ( 1 962) , when he considers the G S C p l ate, g e nera l l y adequate for col lection of Staphylococci in suspected hospital rooms. Walter ( 1 966 ) , has d ivided hospita l airborne bacteria i nto three groups in d e scend i ng of the s ize of particulate : 1) D ust borne bacteria i .e . passengers on rafts of d ebri s , s k i n sca l e s . 96 2) Droplet borne bacteria i . e . passengers within fl uid droplets. 3) B acteria representing the d roplet nuclei from which most or all of the moi sture has evaporated . The Andersen a i r sampler which was used by Sayer et al. ( 1 972) , relates the i s o l ated bacteria to the parent particle size, making it pos s i b l e to pre d i ct the magnitude of inhalation risk. The air sampler used in this study does not do that, therefore the isolated m icro-org a n i s m s were d ivided i nto two groups. 1) H uman associated org anisms which are normal l y found i n or o n h u m a n b o d y a n d cloth i n g , cou l d b e generated from human activities and were not isolated from outdoor a i r samples. These i nclude: Staphylococcus, S. aureus, coag ulase negative Micrococcus specie s , alpha hemolytic Streptococci, G ra m negative rod s, and Diphthiroids species. 2) Environmental organism s which come from other sources such as a i r d ust, soi l , and water. These were most frequently isolated from outdoor a i r samples. 97 These i ncluded Bacillus species, Streptomyces species, and unidentified bacteri a . U n i dentified bacteria were the commonest g roup of bacteria isolated from either hospital or domestic air samples. These were m icro-organisms of no med ical i m portance. They consisted of aerobic g ram negative cocci , larger than Neisseria and Moraxella speci e s . There was also a large presence of very small g ram positive rod s and g ra m negative rod s . It was concl uded that this group was mainly soil borne bacteria which have also been found to be dominant i n the d u st of three types of dwel l i n g s in I n d i a ( Raza, 1 989) . Q uantitative study of d ifferent hospital units showed that the ped iatric ward and female medical wards had the hig hest total count of bacteria . This could be due to many factors , a s d i scussed b y Woods , 1 986. These fin d i ng s could b e expla ined by the fact that the n u m ber of v i sitors in ped iatric and female med ical ward s exceed visitors i n other hospital areas . For example i n one room i n ped iatric ward , there were seven chi ldren and three lad ies 98 at the same time during sampling process and i n one female med ical ward room there were five fem a l e visitors i n only one partition of the four partitions. At no time d id the visitors in the male wards exceed three d uring sampling processing . It was a l so o bserved that the amount of m aterials brought from outside, s uch as carpets, flowers , fruits , were more common in ped iatric and female ward s . There may be other environmental and human factors that cou ld have contri buted to these inconsistencies, which were not observed . I n comparison to other bacteria the numbers of pathogenic micro-organisms i n the hospital a i r was found to be l ow. Pathogens represented less than 1 % of the total count of bacteria i solated . Using an Andersen a i r sampler, Wi l l iam ( 1 956) found that 3% of the total count of org anisms were pathog enic bacteria. However, he included Streptomyces associated micro-org anisms. species, as human In this stud y streptomyces s pecies was considered as a enviro nmental m icro-org anism. The reason for this consideration that the types of streptomyces isolated were u n l i ke those that cause actinomycetoma. 99 The low concentration of pathog e n i c organisms in hospital a i r could possibly be due to the fact that there was not enough a i r current t o d i stri bute t h e bacteria from t h e reservoi r (patient). In order t o evaluate this poss i b i l ity, a i r d rafts were created by aerating and rearrang ing the patient bed sheets , curtains and carpets if present. Air samples specimens were taken before and after this practice . Samples col lected after aerating showed double the numbers of C F U total count as compared with samp l es before aerating. Both samples showed the same types of m icro organisms which d i d not i nclude pathogenic ones. Pathog enic org anisms of the type causing wound infections, shou ld theoretical ly be i n high concentration in certai n hospital areas but this is not the case as they d o not seem to be airborn e . The mode of transmission o f these is l i ke l y t o b e v i a physical contact of staff rather than by a i rborne means. i nfections such as throat infections the In airborne causative agent (pathogenic streptococcus) is usually isolated i n a small numbers ( i e . 1 0 to 20 colonies per swab); whereas one could find a 1 06 1 00 C FU/swa b of non pathogenic streptococcus such as S. viridans i so l ated from same throat swab of the i nfected patient It was interesting to compare the types of a irborne m icro org a n i sms found i n hospital to those at the home environment. As this was the main purpose of this study, serious efforts were made to understand the d ifferences, s i m i larities and the relati'onship of the two environments . Human pathogenic micro-organisms particularly S. aureus and members of Entero bacteriacae were more prevalent in hospitals than i n homes. S. aureus is n ot a very common skin or res p i ratory flora . It would be expected that it come from bacterial lesions or d ifferent types of infections i n patients. These patients would , therefore , be hospital ized and thei r m icro-organisms spread to some degre e . Enteric organisms are l i kely a l so to arise from wounds, stools and uri ne of i nfected patients . Enterobacteriacae were more common i n hospital e nvironment, both for a i r and surface samples, than i n domestic areas as it would be expected . 101 Although there are no standard s for viable or nonvi a b l e particu l ate in t h e operating room, or i n any other hospital area (Kunds i n , 1 985) , the num ber of m icro-org a n i sms in operating rooms and I ntensive care unit was very low. This was antici pated d u e to the h i g h san itation level present in these areas, as compared to other hospital areas. The comparison of m icro-organisms found in homes and the hospital showed that there were more m icro-organisms in residenti al houses i n both air and surfaces than i n the AI Ain hospita l . The m i cro b i a l counts found in the h i ghest status houses compared favorably to that of the hospital and therefore , it coul d be concluded that the these houses have hyg ienic standard close to that found in the hospita l . O n the other hand , there is a noticeable d ifference between the hospital and types two and three res i dential m i crobes. This however reflects i n q uantity rather than i n the types of m i crobes. The poor qual ity houses had the h i g her bacterial population . 1 02 Raza ( 1 989) has reported that the bacterial popu lation i n the i ndoor d ust of s l u m dwe l l i ng s was h i g her than that in m i d d l e class and u pper class dwe l l ings. The fact that the microbial flora of the i ndoor air d epended on the number and types of people present (Oug i d , 1 946), the qual ity of the household system ( F i n k et al. , 1 97 1 ; F raser et a/, . 1 977; P ickeri ng et a/, . 1 976), and mechanica l movem e nt with i n t h e enclosed space . Thi s fact can expl a i n these find i n g s because in the poor houses there are too many people i n a smal l s pace. Therefore , whatever m i crobes are shed wou l d lead t o a b u i ld u p o f numbers i n t h i s confined space. I n contrast, i n the best type of house, there are fewer res i d e nts per cubic meter (area) of house space occu pied and therefore , shed m i crobes are spread out i n the space ava i l a b l e . I n add ition, t h e better t h e house , the better the vent i l ation to sweeps out microbes from indoor environment. C l ea n i ng proced ures also vary between hospita l s and domestic areas and between the d ifferent types of d omestic environments. It was observed that the best type of house had 103 many domestic cleaners, good housekeeping procedures and a good a i r cond itio n i n g system that augur well for good indoor standard s . The s i m i larity i n t h e number o f micro-organisms i n the hospital and in the very g ood quality homes is an i n d i cator that both areas have a g ood hygienic standard . i nternational standard s for sanitation I n AI-Ain Hospital through steri l ization, d isinffection and clea n i n g are appl ied , therefore the hyg ie n i c standard o f a i r a n d surfaces i s h i g h . The hospital a d m i n i stration should be congratu lated for that. It is however not surpri sing that the environmental micro organisms are fou n d i n much h i g her numbers as the housing standards dro p . The effect of desert storm s and spread of soil bacteria would be i nteresting to study. O n visiting home areas, one other s i g n ificant o bservation made was the d ifference i n the numbers of human associated and envi ronm ental m icro-org an isms between the l iving area and 1 04 sleeping q uarters . It was particularly noticed that the number of human and environmental microbes in l iving rooms and bedrooms were found to be h i g her i n the lower status homes. H uman related microbes were found i n bedrooms more frequently than l iving rooms. The i m p l ication i s that more time is spent in bedrooms than l iv i n g rooms. On the other hand the soi l , water and a i r m icro-org a n i sm s , were found more frequently" in l iv i ng rooms than bedroom s . Thi s i nd icates probably that bedrooms have less exposure to d u st than other room s , regard less to the status of the house. Comparison of m i crobial num bers i n a i r samples and on surface are not con s i dered here . The two systems are n ot su pposed to be com para b l e but B uttner and Stetzenbach ( 1 993) sugg est that they are related in certain circumstances . However, the types of micro b i a l g enera (or s pecies)and not the num bers of microbes in these two systems were the same , therefore one wou l d postulate a relationship between the deposit from a i r to surface by gravity and from surface to air, by currents . 105 The study of fun g a l a i r spora is of g reat im portance and i nterest i n order to understand the d i ssemi nation, spread , and movement of the microbes, particularly the pathogeni c ones in the atmosphere (Mostafa, 1 976). I n this study three g enera of fun g i were frequently isolated from hospital air and the three types of houses these were A sperigil/us niger, a Chaetomium species, and an Alternaria species. Another two Penicillium species and Asperigil/us tamarri, were isolated less frequently. S even A sperigil/us species were isolated in this study. Kodama ( 1 986) reported that the air inside aircond itioned homes was found to have fewer fung i , but had a significantly greater number of A sperigillus species, when compared to the outdoor a i r. Raza ( 1 989) reported that A . f1avus and , A. niger were dominant i n a l l the types of dwe l l i n g s in I nd i a . Also h e observed a h i g h concentration of Asperigil/us in most i ndoor environments . It was also found that the most frequent isolates of Asperigillus s pecies from outdoor a i r were A. f1avus, A . niger, A. fumigatus a n d A . terreus i n Kuwait (Mustafa , 1 976) . Th is 1 06 can explain the h i g h concentration of Asperigillus species compared with other fun g a l groups. The study of a nt i biotic sensitivity pattern of patient's micro organi sms is of g reat cl i ni cal rel evance and value. It is a lso appreciated that the knowledge of anti-microbial sensitivity pattern i s also of epidemiolog i ca l value. M i crobes from the same source usua l l y exh i b it s i m i lar suscept i b i l ity to the same anti-microbial agents . When the source of a bacterial epidemic d i sease is i nvestigated , domestic or hospital enviro nmental m icro-organisms are compared with the patients' org a n isms. One of the tools used , among many sophisticated tech ni q ues avai l a b l e , is the anti biotic sensitivity com parison. In this study, this relationsh i p has been evaluated u s i n g coa g u l ase negative Staphylococci (CNS). It was clearly observed that there was a d ifference in sensitivity patterns for hospital-associated m icro-organisms and those isolated from homes. The resu lts also showed that domestic ai rborne C N S were sensitive to nearly a l l the anti biotics tested . The source of d o mestic stra i n s was the establ ished environment or from peop l e who had n ot recently used any anti- 1 07 m i crobial agents. A few of the d omestic stra i n s were resi stant to some antibiotics such as tetracycline. Thi s res i stance was probably due to the fact that some bacteria are natura l ly res i stant to a particular antibiotic even if they were never exposed to the same d rug ( Pelczar et al. , 1 993). When the environment is stab l e , the bacterial population wi l l remain unchan g ed , but if any factors affecti ng the sta b i l aty changed to hosti le environment, only certain individual microbes bearing protective m utation can adapt and survive. In this way, the environment natura l ly selects certain m utant strains that will reproduce , g ive ris e to su bsequant generations, and i n time, be the dominant strai n in the populatio n . O n e o f t h e clearest models for this sort of selection and adaptation is acq u i red d rug res i stance in bacteria (Talaro and Talaro , 1 993) . When development i nfrequent. anti biotics of were first u s ed antibiotic-re s i stant However, as anti biotics in chemotherapy, m icroorganisms was became widely used , resistance became much more of a problem as susceptible 1 08 m icrobes were e l i m inated and the numbers of res i stant micro org an i s m s increased . The i nitial a ppearance of a res istant bacterium i n an otherwise suscepti ble popu lation i s often caused by a m utation in a s i n g l e bacterial gene. The g ene for res istance can be transmitted from a res i stant cel l to a s uscepti ble cel l by conj ug atio n . res i stance. Thi s process is cal led transmissible antibiotic It i s however not known whether the environment where this process takes place has any s i g nificant effect ( Pelczar et a l , . 1 993). Patients stra i n s were the most resi stant ones compared to d omestic and hospital stra i n s . subjected or exposed to Patients stra i n s are usually anti-micro b i a l agents used by hospital ized patients. The appearance of d rug-resi stant bacteria is a reflection of the forces of natural selection because the drug res i stant vari ant from of pathogens has a u n i q ue fitness trait that i s absent from the ori g inal species, it possesses physiological or structural properties that a l low it to g row i n the presence of a stress not tolerated by the orig inal popul ation ( Boyd , 1 98 8 ) . In ecolog ical terms the environmental factor ( i n t h i s case, the d rugs) 1 09 has put selection pressure on the population , thu s the fitter m icrobe (the d rug-resistant one ) survived , and the population has evolved to a cond ition of drug resistance . N atural selection for d rug-resistant forms is apparently a common phenomenon. takes place most frequently in various natural It habitats, l aboratories, and medical environments . The hospital airborne micro-organisms seem to be a mixture of patients ' , environmental and visitor' s stra i n s as their sensitivity fa l l s between domestic and patient stra i n s . l LO CHAPTER V C ON CLUSIONS Human pathogenic m icro-organism s particularly S. 8ureus and mem bers of Enterobacter iacae were very i nfrequent. M i crob i a l flora of the i ndoor air depends on the number and types of people present, thus the q ual ity of the household system and mechanical movement withi n the enclosed space. I n poor houses there are too many people i n a sma ll space . Therefore, whatever m icrobes are shed would lead to a b u i l d up of numbers in t h i s confined space. I n the best type of house, there are fewer residents per cubic meter (area) of house space occu pied and therefore , shed microbes are spread out i n the space ava i l a b l e . I n addition, the better the house, the better the ventilation to sweeps out m icrobes from indoor environment. I I I C l eaning proced u re s a l s o vary between hospitals and d omestic areas and between the d ifferent types of domestic environments . The best type of house had many domestic cleaners , g ood housekeeping proced ures and a good air cond itioning system. The s i m i larity i n the n u m ber of micro-organisms i n the hospital and in the very g ood q u a l ity homes is an ind icator that both areas have a good hyg ienic standard s . The source of dome stic strains of coag ulase negative Staphylococci was the environment or from people who had n ot recently used any anti-microbial agents . Resistance to some anti biotics was detected in some of these strains. This res i stance was probably due to the fact that some bacteria are natura l l y resistant to a particular antibiotic even i f they were never exposed to it. However, patients strains are usually s u bjected or exposed to anti-microbial ag ents used by hospital ized patients therefore , tend to develop resi stance through mutations and ad aptation for survival under the environmental represented by chemotheraputic agents 1 12 conditions which are The hospital airborne m i cro-org anisms seem to be a mixture of patients', environme ntal and visitor's strains as their sensitivity falls between domestic and patient stra i n s . 1 13 CHAPTER VI ... _ .... www� 1 _ _ _ _ _ _ _ _ ___ _ _ _ ... - - - - - - - - - ---- BIBLIOG RAPHY Aas, K. 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