Plant Physiology Preview. Published on July 18, 2014, as DOI:10.1104/pp.114.244939 1 Strigolactone involvement in root development, response to abiotic stress and 2 interactions with the biotic soil environment 3 4 Yoram Kapulnik and Hinanit Koltai 5 Institute of Plant Sciences, ARO, Volcani Center 6 7 8 9 10 Corresponding Author: Yoram Kapulnik, [email protected]; Tel.: +972-50-6220461; Fax: +972-3-9604180 11 12 13 14 15 Running title: Strigolactone affect root development and response 16 17 18 19 One Sentence Summary: Strigolactones, new plant hormones, play a role in root development, root response to nutrient deficiency and plant interactions in the rhizosphere. 20 1 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. Copyright 2014 by the American Society of Plant Biologists 21 ABSTRACT 22 Strigolactones, recently discovered as plant hormones, regulate the development of different 23 plant parts. In the root, they regulate root architecture and affect root-hair length and density. 24 Their biosynthesis and exudation increase under low phosphate levels and they are associated 25 with root responses to these conditions. Their signaling pathway in the plant includes protein 26 interactions and ubiquitin-dependent repressor degradation. In the root, they lead to changes in 27 actin architecture and dynamics, and in localization of the PIN auxin transporter in the plasma 28 membrane. Strigolactones are also involved with communication in the rhizosphere. They are 29 necessary for germination of parasitic plant seeds, they enhance hyphal branching of arbuscular 30 mycorrhizal fungi and they promote rhizobial symbiosis. The current review focuses on the role 31 played by strigolactones in root development, their response to nutrient deficiency and their 32 involvement with plant interactions in the rhizosphere. 33 2 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 34 INTRODUCTION 35 36 Strigolactones have been recently discovered as plant hormones (Gomez-Roldan et al., 37 2008; Umehara et al., 2008) that are produced by a wide variety of plant species (Xie et al., 38 2010; Yoneyama et al., 2013). Several different types of strigolactones can be produced by a 39 single plant species, and different varieties of the same plant species may produce mixtures of 40 different types and quantities of strigolactone molecules (Xie et al., 2010; Yoneyama et al., 41 2013). Strigolactones are also produced in primitive plants, including Embryophyta and Charales 42 (Delaux et al., 2012). In all cases, they are produced and exuded in small amounts (e.g., Sato et 43 al., 2003; Yoneyama et al., 2007a; 2007b). Strigolactones are produced primarily in roots, but 44 their biosynthesis is not limited to the root system and also occurs in other plant parts (reviewed 45 by Koltai and Beveridge, 2013). 46 Although strigolactone biosynthesis derives from the carotenoid-synthesis pathway (Booker 47 et al., 2004; Matusova et al., 2005), only some of the proteins that are crucial for biosynthesis 48 have been identified to date. In the tested higher plant species, three plastid-localized proteins 49 have been found to be involved in the first stages of strigolactone biosynthesis (Booker et al., 50 2004, Matusova et al., 2005). One is a carotenoid isomerase, DWARF27 (D27), characterized in 51 rice (Oryza sativa L.), Arabidopsis (Arabidopsis thaliana) and pea (Pisum sativum) (Lin et al., 52 2009, Waters et al., 2012a; Adler et al., 2012). It can convert all-trans-β-carotene into 9’-cis-β- 53 carotene (Alder et al., 2012). The latter is then oxidatively tailored, cleaved and cyclized by two 54 double-bond-specific cleavage enzymes, carotenoid cleavage dioxygenase (CCD) 7 and 8 55 (Booker et al., 2004; Schwartz et al., 2004), resulting in the bioactive strigolactone precursor 56 carlactone (Alder et al., 2012). The conversion of carlactone to strigolactone has not been 57 characterized, but may include MAX1, a class-III cytochrome P450 monooxygenase (Booker et 58 al., 2005; Alder et al., 2012; Cardoso et al., 2014). The presence of CCD enzymes has been 59 demonstrated in several diverse higher plants (Delaux et al., 2012). Moss (Physcomitrella 60 patens) also contains homologs of these three genes and accordingly, can produce strigolactones 61 (Proust et al., 2011). However, only some of these genes are present in other basal plants and 62 algae (Delaux et al., 2012). Approximately 15 strigolactones have been structurally characterized 63 to date (Ruyter-Spira et al., 2013); all consist of an ABC-ring system connected via an enol ether 64 bridge to a butenolide D ring (Xie et al., 2010). 3 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 65 As plant hormones, strigolactones regulate the development of different plant parts. The 66 first indication that strigolactones function as plant hormones came from an examination of 67 hyperbranching mutants. These mutants' phenotype could not be attributed to altered levels of, or 68 response to one of the established plant hormones known at the time. Hence, a novel signal that 69 was associated with this phenotype was suggested (Beveridge et al., 1997). Later, this signal was 70 identified to be strigolactones, and to act as a long-distance branching factor that suppresses 71 growth of preformed axillary buds (Gomez-Roldan et al., 2008; Umehara et al., 2008). 72 Strigolactones dampen auxin transport in the main stem, thereby enhancing competition 73 between axillary branches and restraining axillary bud outgrowth (e.g., Bennett et al., 2006; 74 Mouchel and Leyser, 2007; Ongaro and Leyser, 2008; Crawford et al., 2010; Domagalska and 75 Leyser, 2011). Accordingly, strigolactones were demonstrated to act by increasing the rate of 76 removal of PIN1, the auxin export protein, from the plasma membrane of xylem parenchyma 77 cells in the stem. This activity was demonstrated by both computational model and experimental 78 data, and was correlated to the level of shoot branching observed in various mutant combinations 79 and strigolactone treatments (Shinohara et al., 2013). In pea, strigolactones were shown to induce 80 the expression of the bud-specific target gene BRANCHED1 (BRC1), which encodes a 81 transcription factor repressing bud outgrowth (Dun et al., 2012), and to be an auxin-promoted 82 secondary messenger (Dun et al., 2012; 2013; Brewer et al., 2009; Ferguson and Beveridge, 83 2009). Other activities of strigolactone include repression of adventitious-root formation 84 (Rasmussen et al., 2012) and plant height (de Saint Germain et al., 2013). They also induce 85 secondary growth in the stem (Agusti et al., 2011). Auxin positively regulates strigolactone 86 biosynthesis by elevating the expression of both MAX3 and MAX4. It has been suggested that 87 auxin and strigolactone modulate each other's levels and distribution, forming a dynamic 88 feedback loop between the two hormones (Hayward et al., 2009). 89 As noted, although the main site of strigolactone synthesis is the roots, part of their activity 90 is in the shoot. Therefore, strigolactones are expected be transported upward in the plant, from 91 root to shoot. Evidence to support this suggestion comes from Kohlen et al., (2011), who showed 92 the presence of the strigolactone orobanchol in the xylem sap of Arabidopsis. Another means of 93 strigolactone transport is probably via specific transporters. The Petunia hybrida ABC 94 transporter PDR1, localized mainly in the bud/leaf vasculature and subepidermal cells of the 95 root, was identified as a cellular strigolactone exporter. It was shown to regulate the level of 4 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 96 symbiosis of arbuscular mycorrhizal fungi (AMF) (discussed further on) and axillary-shoot 97 branching (Kretzschmar et al., 2012). 98 Strigolactones also act in the root to determine root architecture. However, even before 99 strigolactones were identified as plant hormones, they were known to be involved with 100 communication in the rhizosphere. The current review focuses on strigolactone activity in the 101 roots as regulators of root-system architecture, root-hair length and primary root meristem, and 102 on aspects of their signaling. Their involvement with the root response to nutrient growth 103 conditions will also be presented and discussed. Moreover, the effects of strigolactone on root– 104 rhizosphere communication will be presented, along with some implications on the evolution of 105 these interactions and their implementation. 106 107 STRIGOLACTONES REGULATE ROOT DEVELOPMENT 108 109 One of the first pieces of evidence suggesting that strigolactones have a role in the 110 development of root-system architecture was the finding that Arabidopsis mutants in the 111 strigolactone response or biosynthesis have more lateral roots than the wild type (WT; Kapulnik 112 et al., 2011a; Ruyter-Spira et al., 2011). Accordingly, treatment of seedlings with GR24 (a 113 synthetic and biologically active strigolactone; Johnson et al., 1976; Umehara et al., 2008; 114 Gomez-Roldan et al., 2008) repressed lateral root formation in the WT and strigolactone- 115 synthesis mutants (max3 and max4), but not in the strigolactone-response mutant (max2), 116 suggesting that the negative effect of strigolactones on lateral root formation is MAX2- 117 dependent (Kapulnik et al., 2011a; Ruyter-Spira et al., 2011). This negative effect on lateral root 118 formation was reversed in Arabidopsis under phosphate deficiency (Ruyter-Spira et al., 2011; 119 discussed further on). 120 Strigolactones are also suggested to regulate primary root length. GR24 led to elongation of 121 the primary root and to an increase in meristem cell number in a MAX2-dependent manner 122 (Ruyter-Spira et al., 2011; Koren et al., 2013). Accordingly, under conditions of carbohydrate 123 limitation, a shorter primary root and less primary meristem cells were detected in strigolactone- 124 deficient and response mutants in comparison to the WT (Ruyter-Spira et al., 2011). 125 Furthermore, in rice, a major quantitative trait locus on chromosome 1—qSLB1.1—was 126 identified for the exudation of strigolactones, tillering, and induction of Striga germination 5 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 127 (Cardoso et al., 2014). Several root-architectural traits were mapped in the same region (Topp et 128 al., 2013), suggesting that this locus may be involved in both strigolactone synthesis and root- 129 system architecture. 130 Notably, expression of MAX2 under the SCARECROW (SCR) promoter was sufficient to 131 confer a response to GR24 in a max2-1 mutant background for both lateral root formation and 132 cell number in the primary root meristem (Koren et al., 2013). Since SCR is expressed mainly in 133 the root endodermis and quiescence center (Sabatini et al., 2003), these results point to an 134 important role for the endodermis in strigolactone regulation of root architecture. 135 Another one of strigolactones' effects in roots is on root-hair length. Exogenous 136 supplementation of various synthetic strigolactone analogs induced root-hair elongation in 137 Arabidopsis, in both the WT and strigolactone-deficient mutants (max3 and max4), but not in the 138 strigolactone-response mutant max2, suggesting that the effect of strigolactones on root-hair 139 elongation is mediated via MAX2 (Kapulnik et al., 2011a; Cohen et al., 2013). Furthermore, 140 response to auxin and ethylene signaling is required, at least in part, for the positive effect of 141 strigolactone on root-hair elongation. However, MAX2-dependent strigolactone signaling is not 142 necessary for the root-hair elongation induced by auxin (Kapulnik et al., 2011b). Hence, 143 strigolactones affect root-hair length at least in part through the auxin and ethylene pathways 144 (Koltai, 2011). Here too, expression of SCR::MAX2 was sufficient to confer root-hair elongation 145 in roots in response to GR24 (Koren et al., 2013). Since root-hair elongation is regulated in the 146 epidermis, the sufficiency of MAX2 expression under SCR (expressed mainly in the root 147 endodermis and quiescence center) for GR24 sensitivity suggests that strigolactones act non-cell- 148 autonomously at short-range. 149 To summarize, strigolactones play a regulatory role in root development. At least part of this 150 activity is performed non-cell-autonomously, and may involve modulation of auxin transport, as 151 discussed further on. 152 153 STRIGOLACTONE SIGNALING PATHWAY 154 155 As indicated earlier for shoots, in the root, evidence also indicates a role for strigolactones in 156 the regulation of PIN protein activity. One piece of evidence comes from studies of tomato roots, 157 in which exogenous supplementation of 2,4-D (a synthetic auxin that is not secreted by auxin6 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 158 efflux carriers) led to reversion of the GR24-related root effect, suggesting functional 159 involvement of GR24 with auxin export (Koltai et al. 2010). Another piece of evidence comes 160 from studies in Arabidopsis, where treatment of seedlings with GR24 led to a decrease in PIN- 161 FORMED (PIN1)–GFP intensity in lateral root primordia, suggesting that GR24 regulates PIN1 162 and modulates auxin flux in roots, and as a result, alters the auxin optima necessary for lateral 163 root formation (Ruyter-Spira et al., 2011). Furthermore, in Arabidopsis, following GR24 164 treatment that leads to root-hair elongation, PIN2 polarization was changed in the plasma 165 membrane of the root epidermis in the WT but not in the max2 mutant. In addition, in a MAX2- 166 dependent manner, GR24 treatment led to increased PIN2 endocytosis, increased endosomal 167 movement in the epidermal cells, and changes in actin filament architecture and dynamics 168 (Pandya-Kumar et al., 2014). Together, these results suggest that strigolactones affect plasma 169 membrane localization of PIN proteins. At least for PIN2 in the root, they probably do so by 170 regulating the architecture and dynamics of actin filaments and PIN endocytosis, which are 171 important for PIN2 polarization (Pandya-Kumar et al., 2014; Figure 1). 172 Upstream of those events are probably those associated with strigolactone reception. One 173 of the components of strigolactone reception was identified several years ago as an F-box 174 protein, MAX2/D3/RMS4 (Stirnberg et al., 2002; Ishikawa et al., 2005; Johnson et al., 2006). An 175 additional component of strigolactone signaling is D14, which is a protein of the α/β-fold 176 hydrolase superfamily (Arite et al., 2009). Petunia DAD2, a homolog of D14, was shown to 177 interact in a yeast two-hybrid assay with petunia MAX2A only in the presence of GR24, 178 resulting in hydrolysis of GR24 by DAD2 (Hamiaux et al., 2012). In addition, in rice, D14 was 179 shown to bind to GR24 (Kagiyama et al., 2013) and to cleave strigolactones (Nakamura et al., 180 2013). 181 Moreover, via a Skp, Cullin, F-box (SCF)-containing complex (Moon et al., 2004), and in a 182 D14- and D3-dependent manner, it was shown in rice that strigolactones induce degradation of 183 D53, a class I Clp ATPase protein. D53 acts as a repressor of axillary bud outgrowth, and its 184 degradation by strigolactones prevents its activity in promoting axillary bud outgrowth (Jiang et 185 al., 2013; Zhou et al., 2013; Figure 1). Furthermore, in Arabidopsis, strigolactones were 186 suggested to induce, in a MAX2-dependent manner, proteasome-mediated degradation of D14 187 (Chevalier et al., 2014), suggesting a negative regulatory circuit of strigolactones and their own 188 signaling. 7 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 189 This regulatory module of strigolactone/D14-like/D3-like/SCF is likely to have been 190 conserved in plant evolution (Waldie et al., 2014). As indicated above, it was shown to be 191 associated with strigolactone-regulated shoot development (Jiang et al., 2013; Zhou et al., 2013). 192 However it is not clear whether this or a similar reception system acts in the roots. It might be 193 that diversity in this module confers tissue specificity. Different D14-like proteins attached to 194 D3/MAX2 may confer different substrate specificity and as a result, a specific effect on plant 195 development. For example, a KAI2 (D14-LIKE)–MAX2-dependent pathway is responsible for 196 regulating seed germination, seedling growth and leaf and rosette development in response to 197 karrikins—strigolactone-analogous compounds originally found in forest-fire smoke (Flematti et 198 al., 2004; Waters et al., 2012b; Nelson et al., 2011; Waters et al., 2014). Modules for 199 strigolactone response that are composed of other α/β-fold hydrolases and/or degradation of 200 other repressors could potentially lead to execution of the strigolactone-related processes in roots 201 (Figure 1). 202 203 STRIGOLACTONES ARE INVOLVED IN ROOT RESPONSES TO ABIOTIC STRESS 204 CONDITIONS 205 206 Strigolactones seem to have been involved in plant responses to environmental stimuli 207 from their early evolution. In the moss P. patens, they determine the patterns of growth and 208 responses between neighboring colonies (Proust et al., 2011). In higher plants, they are involved 209 in both shoot and root architecture in response to nutritional conditions. 210 Pi is the inorganic form of phosphorus (P) that is available to plants. It is an essential 211 macronutrient for growth and development and in many places, it is considered to be a limiting 212 factor for growth (Bieleski, 1973; Maathuis, 2009). To cope with Pi deprivation, plants modify 213 their growth pattern and architecture. The shoot-to-root ratio is reduced under these conditions 214 (e.g., Ericsson, 1995); shoot branching is inhibited (reviewed by Domagalska and Leyser, 2011), 215 and root architecture is altered (Osmont et al., 2007; López-Bucio et al., 2003). Elongation of the 216 primary root is inhibited under conditions of Pi deficiency (Sánchez-Calderón et al., 2005) and 217 lateral root development is promoted (Nacry et al., 2005), probably for increased foraging of 218 subsurface soil. Following extended deprivation, root growth is also inhibited (Nacry et al., 219 2005). It should be noted, however, that these general patterns are not identical in all plant 8 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 220 species. For example, under Pi deprivation, primary root growth is inhibited in some Arabidopsis 221 ecotypes but not in others (Chevalier et al., 2003). 222 Several plant hormones are known to regulate root-system architecture in response to 223 nutrient conditions. For example, under low Pi conditions, the changes in lateral root formation 224 in Arabidopsis have been suggested to result from increased auxin sensitivity, mediated by an 225 increase in the expression of the auxin receptor TIR1 (Pérez-Torres et al., 2008). Strigolactones 226 might be another plant hormone involved in the regulation of root-system architecture in 227 response to nutrient conditions. Although under conditions of sufficient Pi, strigolactones 228 negatively regulate lateral root formation (Kapulnik et al., 2011a), they reverse their effect to 229 positive regulation when Pi is limited (Ruyter-Spira et al., 2011). This suggests that 230 strigolactones act as another key regulator of lateral root formation, promoting their development 231 under low Pi conditions and repressing their emergence once Pi is abundant. 232 The length and density of root hairs are increased under Pi-deficient conditions, probably 233 to expand root surface area and enhance nutrient acquisition (Bates and Lynch, 2000; Péret et al., 234 2011; Gilroy and Jones, 2000). Indeed, the plant’s ability to absorb nutrients from the soil is 235 suggested to be directly associated with root-hair length and number (Sanchez-Calderon et al., 236 2005; reviewed by Gilroy and Jones, 2000). The recorded ability of strigolactone analogs to 237 increase root-hair length (Kapulnik et al., 2011a) may indicate their role in root-hair elongation 238 as an adaptive process in plants to growth conditions. 239 Also of significance is the dependence on strigolactones for the seedling response to Pi 240 deprivation, in terms of increasing root-hair density. Arabidopsis mutants, defective in 241 strigolactone biosynthesis or response, have a reduced ability to increase their root-hair density 242 in response to low Pi shortly after germination (Mayzlish-Gati et al., 2012). In accordance with 243 the suggestion that low Pi response is mediated by an increase in TIR1 expression (Pérez-Torres 244 et al., 2008), the strigolactone-response mutant, under conditions of Pi deprivation, displayed a 245 reduction, rather than induction of TIR1 expression (Mayzlish-Gati et al., 2012). 246 The reduced ability of strigolactone mutants to respond to low Pi conditions shortly after 247 germination may compromise survival of these seedlings under these conditions (Mayzlish-Gati 248 et al., 2012). These findings suggest an important role for strigolactones in plant adaptation to 249 stress. However, later on in plant development, even the strigolactone mutants recover, and are 250 able to respond to low Pi conditions (Mayzlish-Gati et al., 2012). This seedling recovery 9 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 251 suggests the involvement of other mechanisms that are not dependent on strigolactones for 252 responding to Pi deprivation, which are effective later on in plant development. 253 Similarly, strigolactone involvement in responses to phosphate and nitrate was shown in 254 rice, by analyzing the response of strigolactone-synthesis (d10 and d27) or insensitive (d3) 255 mutants to reduced concentrations of Pi or nitrate (NO3−). Reduced Pi or NO3− concentrations 256 led to increased seminal root length and decreased lateral root density in the WT, but not in the 257 strigolactone mutants. Application of GR24 restored seminal root length and lateral root density 258 in the WT and in the strigolactone-biosynthesis mutants, but not in the strigolactone-response 259 mutant, suggesting that strigolactones are involved with the response to Pi and NO3− in rice as 260 well, leading to a D3-dependent change in rice root growth. In addition, based on changes in the 261 transport of radiolabeled indole-3-acetic acid, it was suggested that the mechanisms underlying 262 this regulatory role of D3/strigolactones involves modulation of auxin transport from shoots to 263 roots (Sun et al., 2014). 264 Pi deprivation leads to an increase in strigolactone exudation. Nitrogen (N) deficiency has 265 also been shown to increase strigolactone exudation. Nevertheless, it might be that N deficiency 266 affects strigolactone levels via its effect on P levels in the shoot. Indeed, a correlation was found 267 between shoot Pi levels and strigolactone exudation across plant species (Yoneyama et al., 268 2007a; 2007b; 2012). A clear correlation was also found in both Arabidopsis and rice between 269 this elevation in strigolactone levels and a decrease in shoot branching under restricted-Pi growth 270 conditions. In Arabidopsis, in correlation with the changes in shoot architecture, the level of the 271 strigolactone orobanchol in the xylem sap was increased under Pi deficiency (Kohlen et al., 272 2011). In rice, under these conditions, tiller bud outgrowth was inhibited and root strigolactone 273 (2′-epi-5-deoxystrigol) levels increased (Umehara et al., 2008). The increase in strigolactone 274 biosynthesis and exudation under low Pi conditions may also induce increased branching of 275 mycorrhizal hyphae (Akiyama et al., 2005; Besserer et al., 2006; 2008; Gomez-Roldan et al., 276 2008; Yoneyama et al., 2008), as detailed in the following chapters, and hence increased 277 mycorrhization. 278 279 280 281 10 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 282 STRIGOLACTONES ARE SIGNALS FOR PLANT INTERACTIONS 283 284 Strigolactones were initially identified as germination stimulants of the parasitic plants 285 Striga and Orobanche (e.g., Cook et al., 1972; Yokota et al., 1998; Matusova et al., 2005; Xie et 286 al., 2007; 2008a; 2008b; 2009; Goldwasser et al., 2008; Gomez-Roldan et al., 2008). It was only 287 later that strigolactones were also identified as stimulants of hyphal branching in AMF (e.g., 288 Akiyama et al., 2005; Besserer et al., 2006; 2008; Gomez-Roldan et al., 2008; Yoneyama et al., 289 2008). In addition, strigolactones were shown to stimulate nodulation in the legume–rhizobium 290 interaction process (Foo and Davies, 2011). 291 292 Mycorrhizal Symbiosis 293 The most prevalent symbiosis on earth is the arbuscular mycorrhizal (AM) symbiosis, which 294 consists of an association between the roots of higher plants and soil AMF. The AMF are 295 members of the fungal phylum Glomeromycota (Redecker and Raab, 2006), and symbiotic 296 associations are formed with most terrestrial vascular flowering plants (Smith and Read, 2008), 297 in most cases contributing to plant development, especially under suboptimal growth conditions. 298 During the symbiosis, AMF hyphae, which extend through the soil, provide a greater root 299 surface area to exploit a larger volume of soil, thereby enhancing the amount of nutrients 300 absorbed from the soil for the plant (Rausch and Bucher, 2002). In return, the fungus receives 301 fixed carbon in the form of glucose (reviewed by Douds et al., 2000), hexoses (Shachar-Hill et 302 al., 1995; Solaimand and Saito, 1997) or sucrose from the host. 303 In general, the AM symbiosis is comprised of two distinct functional stages: the 304 "presymbiotic stage" and the "symbiotic stage". A very detailed description of the presymbiotic 305 stage confirmed that fungal spore germination in the soil and the growth of fungal hyphae are 306 both stimulated in the presence of a host root (Mosse and Hepper, 1975; Gianinazzi-Pearson et 307 al., 1989; Giovannetti et al., 1996; Buée et al., 2000; Nagahashi and Douds, 2000; Requena et al., 308 2007). These two phenomena, together with the hyphal branching response, may reflect unique 309 communication in the rhizosphere to enhance successful mycorrhization on the host (Koske and 310 Gemma, 1992). 311 Purified strigolactones from root exudates or synthetic strigolactones have been shown 312 capable of inducing hyphal branching in many AMF (Akiyama et al., 2005). These molecules are 11 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 313 present at sub-nanogram levels in the rhizosphere (Akiyama and Hayashi, 2006; Akiyama et al., 314 2005). Similarly, the synthetic strigolactone GR24 was shown to effectively induce AMF hyphal 315 branching at a concentration of 10-8 M (Gomez-Roldan et al., 2008). Accordingly, strigolactone- 316 deficient mutants of pea and tomato exhibit reduced levels of AMF hyphal branching in their 317 rhizosphere as compared to the response obtained in the presence of WT root exudates (Gomez- 318 Roldan et al., 2008; Koltai et al., 2010b). 319 In a more in-depth study, it was demonstrated that strigolactones rapidly induce changes in 320 AMF energy metabolism before any gene-expression process in the fungus can be detected. 321 When AMF hyphae were exposed to the synthetic strigolactone GR24, a rapid alteration (within 322 60 min) in mitochondrial shape, density and motility was observed. In Gigaspora rosea hyphae, 323 NADH concentrations, dehydrogenase activity and ATP content were altered within minutes by 324 application of GR24 (Besserer et al., 2006; 2008). 325 The importance of strigolactones to AMF establishment was reinforced by the observation 326 of a lower colonization rate of a tomato strigolactone-biosynthesis mutant by AMF spores than 327 that obtained in WT roots. Interestingly, these differences were less pronounced when plants 328 were inoculated with "whole inoculum" (consisting of spores, hyphae and infected roots) (Koltai 329 et al., 2010b). 330 Nevertheless, it was shown that root exudates of mycorrhitic plants induce Striga and 331 Orobanche seed germination to a lesser extent than the induction obtained by exudates of non- 332 mycorrhitic plants (Lendzemo et al., 2009; Fernández-Aparicio et al., 2010). Moreover, 333 strigolactone production was shown to be significantly reduced in roots of mycorrhitic tomato 334 plants (López-Ráez et al., 2011). Therefore, strigolactones may be negatively regulated by AMF 335 via a feedback loop. Alternatively, it may be that AMF colonization has a significant impact on 336 enhancement of AM symbiosis and consequently, increased Pi acquisition, which may then be 337 reflected in elevated levels of P content, the latter inducing suppression of strigolactone 338 biosynthesis. 339 It is not yet clear whether strigolactones have any role during fungal morphogenesis in the 340 host cortical cells or during symbiosis stages. Moreover, it is not clear whether strigolactones are 341 essential for the AMF interaction. 342 343 12 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 344 Parasitic Plants 345 Witchweed (Striga spp.) and broomrape (Orobanche and Phelipanche spp.) are important 346 parasitic weeds that have a devastating effect on the production of many crop species, resulting 347 in economic damage and food losses worldwide (Parker, 2009). The damage conferred on crop 348 development and productivity has been summarized elsewhere (Joel, 2000; Gressel and Joel, 349 2013). 350 The communication between parasites and their host plants depends on strigolactones, as 351 signal molecules which are exuded from the host roots into the rhizosphere. These signals mostly 352 involve induction of seed germination of the parasitic plants which, within a few days, must 353 attach to their host to acquire nutrients, or die (Joel and Bar, 2013). This communication allows 354 germination of the parasitic plant at the right distance from the root surface, at the right time in 355 the season and with the right nutritional, temperature and moisture levels in the host rhizosphere. 356 Following the parasitic plant's germination, a tubercle develops underground and shoot 357 outgrowth is initiated. The shoots emerge aboveground, flower, and produce tens of thousands of 358 seeds (for a more in-depth review, the reader is referred to Joel, 2013). 359 Three types of isoprenoid compounds stimulate the germination of root-parasitic plants: 360 dihydrosorgoleone, the sesquiterpene lactones, and strigolactones (Bouwmeester et al., 2003). 361 Strigolactones are active at extremely low concentrations (on the order of 10-7 to 10-15 M; Joel, 362 2000). A variety of natural strigolactones were shown able to induce germination of Orobanche 363 minor from 10 pM strigolactones (for orobanchol, 2'-epiorobanchol and sorgomol) to 10 nM for 364 7-oxoorobanchol. The synthetic analog GR24 is 100-fold less active than natural strigolactones 365 (Kim et al., 2010). Advances in chromatography and mass spectrometry are enabling the 366 discovery and characterization of novel strigolactones. 367 368 Symbiotic Interactions with Rhizobium 369 The nitrogen-fixing bacteria of the genus Rhizobium play a fundamental role in nodule 370 formation and beneficial symbiotic interactions on the roots of legumes such as pea, bean 371 (Phaseolus vulgaris), clover (Trifolium spp.) and alfalfa (Medicago sativa). The symbiotic 372 interaction involves signal exchange between the partners that leads to mutual recognition and 373 development of the nodule structure. In short, at the preinfection stage, the bacteria sense 374 flavonoids that are secreted from the legume host roots. These flavonoid molecules, which are 13 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 375 specific to each legume–rhizobium interaction, activate the production and secretion of 376 lipochitooligosaccharide nodulation (Nod) factors from the bacteria that are recognized by the 377 host plant. In most cases, Nod-factor perception leads to induction of a cascade of signaling 378 events, such as root-hair deformation and infection-thread formation, and is involved in triggering 379 cell division in the cortex of the root, leading to nodule organ formation. Production of Nod 380 factors and exopolysaccharides by many of the rhizobium bacteria elicits an infection thread 381 where the penetrated bacteria multiply. Intracellular bacterial cells then differentiate to 382 "bacteroids"—the nitrogen-fixing stage of the symbiosis. In addition to the morphological and 383 cellular modifications, plants and bacteria produce and respond to large groups of peptides, 384 transcriptional factors, and early and late nodulation (nod) genes. However, the molecular 385 mechanisms by which many of them are involved in the differentiation process are poorly 386 understood. Within the nodule meristem and after cell differentiation, rhizobia bacteroids supply 387 ammonia or amino acids to the plant and in return, receive organic acids as a carbon and energy 388 source (Markmann and Parniske, 2009). 389 The ability of strigolactones to alter plant-meristem development led to the search for 390 strigolactone involvement in this symbiotic interaction. The potential of strigolactones to control 391 nodulation was verified using the strigolactone-deficient rms1 mutant in pea (Pisum sativum L.) 392 (Foo and Davis, 2011). This work showed that endogenous strigolactones are positive regulators 393 of nodulation in this plant. Using rms1 mutant root exudates and root tissue that were almost 394 completely deficient in strigolactones, Foo and Davies, (2011) demonstrated a 40% reduction in 395 the number of nodules relative to WT plants that contained strigolactones. Application of GR24 396 to rms1 plants resulted in an increase in the number of nodules on the mutant roots to the level 397 obtained on the WT (without exogenous application of strigolactones). GR24 application can also 398 enhance nodule number in WT pea, M. sativa and Lotus japonicus (Soto et al., 2010; Foo and 399 Davies, 2011; Liu et al., 2013). It was also shown that strigolactones in the root, but not shoot- 400 derived factors, can regulate nodule number (Foo et al., 2014). Genetic studies indicated that 401 strigolactones may act relatively early in nodule formation, rather than during nodule 402 organogenesis (Foo et al., 2013 a, b). Moreover, it was shown that strigolactones do not influence 403 nodulation by acting directly on the rhizobium bacteria (Soto et al., 2010) or on the Ca2+ 404 signaling that follows flavonoid perception (Moscatiello et al., 2010). It was suggested that 405 strigolactones are not essential for the development of a functional nodule but may be important 14 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 406 in determining the optimal nodule number, thereby having a quantitative effect on nodulation in 407 pea (Foo et al., 2014). 408 The mechanism governing strigolactone enhancement of the nodulation process is still an 409 enigma. One potential explanation might be that strigolactones interact with auxin distribution 410 during the cell-division process that leads to nodule development. Auxin was found to be 411 accumulated in dividing cortical cells in L. japonicus and NODULE INCEPTION, a key 412 transcription factor in nodule development, was found to positively regulate this accumulation 413 (Suzaki et al., 2012). Thus, the fact that strigolactones also regulate auxin transport suggests an 414 additional regulatory path for this symbiotic interaction. Furthermore, it was shown that auxin 415 positively regulates strigolactone production (Hayward et al., 2009), which suggests a positive- 416 feedback regulation loop between auxin and strigolactones in the promotion of nodulation in 417 legume roots. 418 419 CONCLUDING REMARKS 420 421 Strigolactones are an important group of molecules. They likely developed in plants as key 422 regulators of plants' developmental adaptations to environmental conditions. Their production 423 and exudation from roots was utilized by other organisms to the benefit (AMF and rhizobia) or 424 detriment (parasitic plants) of the host plants. Strigolactones may be involved in additional cases 425 of communication in the rhizosphere, as well as in additional responses of the plant to growth 426 conditions. This is due to the high complexity of the rhizosphere (Jones and Hinsinger, 2008), 427 which is composed of (1) a multiplicity of organisms and (2) microconditions in soil “pockets”, 428 e.g., low levels of nutrients. This complexity may hinder the evaluation of additional functions of 429 strigolactones under the non-homogeneous rhizospheric conditions that are normally found in 430 nature. 431 Another interesting aspect of strigolactones is their potential use in agriculture. A number of 432 publications have discussed their implementation as inducer of suicidal seed germination of 433 parasitic plant (e.g., Zwanenburg et al., 2009; Vurro and Yoneyama, 2012; Zwanenburg et al., 434 2013). However, strigolactones may be used in additional approaches for the development of 435 new agricultural methodologies and technologies, compatible with emerging concepts of 436 sustainable agriculture. For example, strigolactones may be used for improvement of root-system 15 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. 437 architecture, e.g., to develop a hyperbranched root system for increased nutrient-use efficiency, 438 or deeper roots for increased water-use efficiency. They may also be used for regulation of shoot 439 branching when, for example, the emergence of axillary branches is undesirable. Strigolactone 440 analogs and mimics that are specific for one activity (e.g., shoot branching) are already being 441 developed (Fukui et al., 2011; 2013; Boyer et al., 2013). Strigolactone inhibitors may be used to 442 enhance rooting of plant cuttings (Rasmussen et al., 2012), potentially promoting the propagation 443 of woody plants for the industry and for conservation of endangered species. 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All rights reserved. 804 Zhou F, Lin Q, Zhu L, Ren Y, Zhou K, Shabek N, Wu F, Mao H, Dong W, Gan L (2013) 805 D14-SCFD3-dependent degradation of D53 regulates strigolactone signalling. Nature 806 504: 406-410 807 Zwanenburg B, Mwakaboko AS, Reizelman A, Anilkumar G, Sethumadhavan D (2009) 808 Structure and function of natural and synthetic signalling molecules in parasitic weed 809 germination. Pest Manag Sci 65: 478-491 810 Zwanenburg B, Nayak SK, Charnikhova TV, Bouwmeester HJ (2013) New strigolactone 811 mimics: Structure–activity relationship and mode of action as germinating stimulants for 812 parasitic weeds. Bioorg Med Chem Lett 23: 5182-5186 813 814 815 816 817 818 Figure legend 819 820 Figure 1. A model of the putative signaling pathway of strigolactone in roots. An α/β-fold 821 hydrolase protein may serve as the strigolactone receptor. It may interact with MAX2 and as a 822 result, lead to degradation by ubiquitination of a repressor (reviewed by Waldie et al., 2014). 823 These or similar events may lead to changes in the architecture and dynamics of actin filaments 824 and PIN endocytosis which is important for PIN2 polarization. As a result, PIN2 protein 825 polarization is affected, which may lead to changes in auxin flux, and to execution of 826 strigolactone-associated root effects, such as root-hair elongation. 827 828 28 Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved. MAX2 SCF complex α/β HYDROLASE REPRESSOR ? Key Strigolactones Ubiquitin PIN containing membrane Root responses Actin filament (e.g., root hair elongation) Downloaded from on June 17, 2017 - Published by www.plantphysiol.org Copyright © 2014 American Society of Plant Biologists. All rights reserved.
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