Antibiotic Resis Antibiotic Resistance What are antibiotics? Mechanisms of resistance Man Antibiotics are substances produced by micro-organisms that kill other microorganisms. Most of them have been derived from soil dwelling microbes, fungi and bacteria and some can in fact be synthesised chemically. Resistance can develop in four main ways. The bacteria can: 1. P fo in re tr Discovery The ancient Greeks and Indians used mouldy bread to treat wounds and various others noted the beneficial effects of similar compounds. In 1928 Alexander Fleming noted that a common fungus, Penicillium notatum had destroyed bacteria in a Staphylococcus culture plate, but it was not until the 1940s, when two chemists, Florey and Chain, developed a method of mass production that it became available for widespread use during the Second World War. Since then more than 100 different antibiotic compounds have been found, most of them from soil-dwelling bacteria. How antibiotics work Antibiotics essentially work in two ways: 1. Bactericidal antibiotics kill the bacteria generally by either interfering with the formation of the bacterium’s cell wall or its cell contents. Penicillin is one of these. 2. Bacteriostatic antibiotics stop bacteria from multiplying by interfering with bacterial protein production, DNA replication, or other aspects of their cellular metabolism, e.g. tetracyclines, sulphonamides Some antibiotics are broad spectrum: these kill a whole range of bacteria both Gram positive and Gram negative; some of which are pathogenic. They may also kill the normal gut bacteria. Narrow spectrum antibiotics affect only a small range of bacteria. When antibiotics were introduced they were hailed as miracle drugs. It seemed that the era of death from bacterial infections was over. However, in only a few short decades things have changed dramatically. Bacteria reproduce in such vast numbers that a random mutation can quickly result in a resistant strain. Antibiotic resistance – more commonly known nowadays as antimicrobial resistance (AMR) – is the ability of certain organisms to adapt and continue to multiply in the presence of an antibiotic. (The term ‘antimicrobial’ also includes drugs that act against viruses, fungi and protozoa, in addition to those acting against bacteria.) Resistant strains began to appear within a few years of the introduction of antibiotics, so new antibiotics had to be found to replace the ones to which resistance had developed. In the past 30 years only two new classes of antibiotics have appeared, so the problem of antibiotic resistance is becoming more serious. The World Health Organisation has classified antimicrobial resistance as a “serious threat’ that ‘has the potential to affect anyone, of any age, in any country”. 1. develop methods to inactivate or modify the antibiotic 2. alter its surface and so prevent the antibiotic from binding to it. 3. change its metabolic pathways to circumvent the antibiotic 4. reduce the concentration of the antibiotic within it by either (a) reducing the permeability of its surfaces so less antibiotic enters, or (b) increasing the rate at which the antibiotic is actively pumped out of the bacterial cell. Factors that contribute to antibiotic resistance 2. S e 3. P o a e re 4. D in Antibiotic Resistance Gen 1. Unnecessary prescription of antibiotics for viral infections against which they are useless. Every time an antibiotic is taken it kills off the more susceptible members of the germ population but it also increases the chance that resistance will develop is some species of bacteria in the body. 2. The overuse of broad spectrum antibiotics because the actual causative organism has not been identified. The broad spectrum antibiotic kills many species and, if resistance develops in any bacterial species in the animal or human, then it will be able to reproduce more easily because there is little competition. The resistance genes may also transfer to other bacterial species. 3. Failure to finish a course of antibiotics. When an antibiotic is taken the most susceptible bacteria die first leaving a population that is more resistant. If the course of antibiotics is stopped before all the bacteria are killed then the animal or human may have a relapse and the bacteria that caused the infection will be much more resistant to the antibiotic and harder to kill. Antib trans two w 1. V is fr 2. H a sp lo 4. Residues in food. Many farm animals, especially those farmed intensively, are routinely given antibiotics at certain times in their life even though they might not be sick. This reduces mortality and increases live weight gain. There is a mandatory period after treatment with antibiotics during which neither the animals nor their products may be allowed to enter the food chain. This is done to allow time for all traces of the antibiotic to be eliminated. Even if foods containing residues of antibiotics are not allowed to enter the food chain, the fact that an animal has been exposed to an antibiotic treatment at a prior time in its life may allow bacteria containing resistant genes to survive in food products derived from that animal. Unless food hygiene measures are adequate, bacteria with resistant genes may transfer resistance to normal gut bacteria in those who consume the food products. In Ireland all milk is routinely tested for antibiotic residues. Some countries allow farmers to purchase and administer antibiotics to their animals. Care must therefore be taken to ensure that food products in our shops and supermarkets are safe. Mul Toda resis at lar ‘supe They Clos emer all of healt c Resistance o it. c c mped ce gainst ills off also pecies ctual ctrum ny e to he es. s taken hat is all the apse e ed their ity after nor is ated. wed posed cts e ance ucts. Some cs to ood Antibiotic Resistance Managing antimicrobial resistance (AMR) 1. Preventing infections and preventing the spread of resistance, for example, by improving hygiene practices. This is very effective in reducing the spread of infections, including those that are resistant to antibiotics. This also helps to raise awareness of transmission routes. 2. Surveillance in order to track transmission routes, measure the extent of resistance and provide early warning of specific risks. 3. Promoting the responsible use of antibiotics around the world in order to minimise inappropriate use. This could involve restricting access to currently available antibiotics in order to preserve their effectiveness into the future. Some antibiotic classes might be reserved for specific infections. 4. Developing new drugs, vaccines and diagnostic tests and incentivising the development of new antibiotic classes for the future. Gene transfer Antibiotic resistance can be increased by the ability of bacteria to transfer their resistance to other bacteria. This transfer can occur in two ways either vertically or horizontally. 1. Vertical gene transfer is the normal way genetic information (genes) is passed on in most organisms. This is when information is passed from the parent to the offspring, i.e. from one generation to the next. 2. Horizontal gene transfer is when genes are transferred within a generation from one individual to another or even from one species to another. Bacteria are particularly good at this, using loops of genetic material called plasmids. Species 1 pilus resistant Its aim is to make sure that health products that it regulates do what they are intended to do and are as safe as possible, whether they are intended for the Irish market or for export. Antibiotic Resistance Until 2014 the HPRA was known as Irish Medicines Board (IMB). The new name better reflects its broader remit and regulatory functions which now include: • • • • • • • • • Human medicines Veterinary medicines Clinical trials Medical devices Controlled drugs Blood and blood components Tissues and cells Cosmetic products The protection of animals used for scientific purposes • Organs intended for transplantation Species 2 Species 1 Plasmid with antibiotic- The HPRA (The Health Products Regulatory Authority) is a state agency whose role is to protect and enhance public and animal health by regulating medicines, medical devices and other health products. It regulates clinical trials and human organs for transplantation. It also monitors the safety of cosmetics. Vertical transfer Horizontal transfer Multidrug resistant bacteria Today there is concern about the increasing occurrence of multidrug resistant bacteria especially in hospitals even in the community at large. These bacteria, commonly referred to in the press as ‘superbugs’, are resistant to almost all the known antibiotics. They include MRSA (methicillin-resistant Staphylococcus aureus, Clostridium difficile and multi-drug resistant tuberculosis. The emergence of gram-negative pathogens that are resistant to virtually all of the available antibiotics is a particularly serious problem for the healthcare sector. Fuctions of HPRA • The HPRA grants licences to companies to make, distribute and market medicines after a review of their safety, quality and effectiveness. • It continuously monitors medicines, medical devices and other health products, responding quickly to any safety or quality concerns. • It produces safety and quality information to support the safe use of health products. • It inspects companies and facilities that test, make or distribute health products to ensure that they comply with relevant standards and legislation. Find out more about the HPRA at www.hpra.ie Find this and other lessons on www.sta.ie Antibiotic AntibioticResist Resis Antibiotic Resistance Syllabus SyllabusReferences References Student StudentActivities Activities Exa Ex The Themain mainsyllabus syllabusreferences referencesforforthe thelesson lessonare: are: Use Useavailable availableresources resourcestotolearn learnmore moreabout aboutthe thefollowing followingtopics. topics. InIneach eachcase casesummarise summariseyour yourfindings findingsinina adiagram, diagram,poster posteroror electronic electronicpresentation. presentation. Leav Le Leaving LeavingCertificate CertificateBiology Biology • • Distribution Distributionofofbacteria bacteriaand andfungi fungiininnature nature(3.1.2) (3.1.2) • • Understand Understandthe theterm term‘pathogenic’ ‘pathogenic’ (3.1.3): (3.1.3):Definition Definitionand androle role ofofantibiotics. antibiotics.Economic Economicimportance importanceofofbacteria. bacteria.Potential Potential abuse abuseofofantibiotics antibioticsininmedicine medicine Leaving LeavingCertificate Certificate Agricultural AgriculturalScience Science • • The Thecow. cow.Common Commondiseases diseases– –cause, cause,symptoms, symptoms,prevention prevention and andcontrol. control.Bacteriology Bacteriologyininrelation relationtotoclean cleanmilk milkproduction. production. Leaving Leaving Certificate Certificate Chemistry Chemistry • • Organic Organicnatural naturalproducts products– –range rangeand andscope scopeand andtwo two examples examples(7.4) (7.4) Learning LearningOutcomes Outcomes On Oncompletion completionofofthis thislesson, lesson,students studentsshould shouldbebeable ableto:to: • • Describe Describethe thedifference differencebetween betweenananantibiotic antibioticand andanan antimicrobial antimicrobialsubstance substance • • Outline Outlinehow howantibiotics antibioticswere werediscovered discovered • • Know Knowthe thetwo twoways waysantibiotics antibioticswork: work:bactericidal bactericidaland and bacteriostatic bacteriostaticand andbebeable abletotoexplain explainthe thedifference difference • • Distinguish Distinguishbetween betweenbroad broadand andnarrow narrowspectrum spectrumantibiotics antibiotics • • Explain Explainwhat whatisismeant meantbybyantibiotic antibioticresistance resistanceand andstate statethe the four fourmechanisms mechanismsofofantibiotic antibioticresistance resistance • • Describe Describethe thetwo twolevels levelsofofgene genetransfer; transfer;vertical verticaland and horizontal horizontal • • Name Namesome someresistant resistantstrains strainsofofbacteria. bacteria. (b) (b) (i)(i) 1.1.The Thedifferent differentfamilies familiesofofantibiotics antibioticsand andhow howeach eachworks. works. 2.2.What Whatspecies speciesofoffarm farmanimals animalsare areroutinely routinelygiven givenantibiotics antibiotics and andwhat whatdiseases diseasesthey theyare aregiven givenfor? for? Are Arethey theygiven givenforforany any other otherreason reasonthan thantotocure curediseases? diseases? 3.3.The Theuse useofofantibiotics antibioticsduring duringthe theSecond SecondWorld WorldWar Warand and which whichclasses classesofofsoldiers soldierswere weregiven givenpriority prioritytotoreceive receivethis this scarce scarceresource. resource. 4.4.The Thestandard standardmethod methodofoftesting testingbacterial bacterialdiseases diseasesforfor resistance resistancetotoparticular particulardrug druggroups. groups. (ii)(ii) (iii) (iii) (iv) (iv) (v)(v) (vi) (vi) Antibiotic Resistance 5.5.The Thedevelopment developmentofofantimicrobial antimicrobialresistance resistanceininviruses virusessuch such asas AIDS AIDSand andInfluenza. Influenza. (c)(c) 6.6.The Thetop topten tenmultiple multipledrug drugresistant resistantdiseases. diseases. (i)(i) 7.7.How Howthe thehuman humanbody bodydefends defendsitself itselffrom fromdisease disease (ii)(ii) 8.8.The Thestructure structureofofbacteriophages bacteriophagesand andthe thehistory historyofoftheir theiruse use asasa atreatment treatmentforforbacterial bacterialdiseases. diseases. (iii) (iii) 9.9.How Howbacteria bacteriaare areidentified identifiedincluding includingthe theuse useofofGram’s Gram’sstain. stain. (iv) (iv) 10. 10. The Thefunction functionofofthe theHPRA HPRA (formerly (formerlyknown knownasasthe theIrish Irish Medicines MedicinesBoard) Board)ininIreland. Ireland. (v)(v) True/False True/FalseQuestions Questions a)a)Antibiotics Antibiotics always always killkill bacteria? bacteria? T TF F b)b)Most Most antibiotics antibiotics are are derived derived from from soil soil dwelling dwelling organisms. organisms. T TF F General GeneralLearning LearningPoints Points These Theseare areadditional additionalrelevant relevantpoints pointswhich whichare areused usedtotoextend extend knowledge knowledgeand andfacilitate facilitatediscussion. discussion. c)c)Horizontal Horizontal gene gene transfer transfer occurs occurs between between different different species. species.T TF F d)d)Fleming Fleming was was the the first first person person toto show show that that antibiotics antibiotics can can cure cure disease. disease. T TF F e)e)AllAll bacteria bacteria are are pathogenic. pathogenic. T TF F • • The Thetransfer transferofofgenes genesbetween betweenspecies specieshas hasbeen beenbig bignews news forforthe thelast lastnumber numberofofyears, years,especially especiallyininrelation relationtotoGM GMfood, food, while whilebacteria bacteriahave havebeen beenquietly quietlydoing doingit itforforbillions billionsofofyears years using usingplasmids. plasmids. f) f) You You should should stop stop taking taking aa course course ofof antibiotics antibiotics asas soon soon asas you you feel feel better. better. T TF F • • Teixobactin Teixobactinisisthe thefirst firstnew newantibiotic antibioticininthirty thirtyyears yearsand andwas was discovered discoveredbybyresearchers researchersfrom fromNorth-Eastern North-EasternUniversity Universityinin Boston Bostonusing usingananelectronic electronicchip chiptotogrow growthe themicrobes microbesininthe the soil soiland andthen thenisolate isolatetheir theirantibiotic antibioticcompounds. compounds.It Itappears appearstoto bebeeffective effectiveinintreating treatingsome someofofthe themost mostdifficult difficultinfections. infections. It Itworks workswell wellininmice micewith withvery veryfew fewside sideeffects effectsbut butstill stillhas has totobebescaled scaledupuptotoproduce producequantities quantitiestototest testononhumans. humans. Positive Positivetests testsononmice micedodonot notguarantee guaranteesuccess successininhumans. humans. h)h)Many Many new new antibiotics antibiotics have have been been discovered discovered inin the the last last thirty thirty years. years. g)g)Using Using too too many many broad broad spectrum spectrum antibiotics antibiotics encourages encourages resistance. resistance. T TF F T TF F i) i) Narrow Narrow spectrum spectrum antibiotics antibiotics killkill aa whole whole range range ofof bacteria. bacteria.T TF F j) j) Antimicrobial Antimicrobial compounds compounds killkill viruses viruses and and parasites. parasites. T TF F k)k)Antibiotics Antibiotics are are substances substances made made byby microorganisms microorganisms that that killkill viruses. viruses. T TF F Check Checkyour youranswers answerstotothese thesequestions questionsononwww.sta.ie. www.sta.ie. Leav Le (i)(i) (ii)(ii) (iii) (iii) (iv) (iv) (v)(v) cResistance Resistance Antibiotic Resistance Examination ExaminationQuestions Questions Did DidYou YouKnow? Know? pics. cs. r Leaving LeavingCertificate CertificateBiology Biology(HL) (HL)2007, 2007,Q.Q.1414(b(b&&c)c) scs ny any (ii)(ii) What Whatare arethe thetwo twomain mainbiochemical biochemicalcomponents componentsofofa avirus virus particle? particle? • •Necrotizing Necrotizingfasciitis fasciitisisisa aserious seriousquick quick spreading spreadingbacterial bacterialskin skininfection infectionthat thatkills killsthe thebody’s body’ssoft softtissue. tissue. (Necrotizing (Necrotizingmeans means‘causing ‘causingtissue tissuedeath’). death’).It Itisisoften oftenreferred referred totoininthe thepress pressasasthe the‘flesh ‘flesheating eatingbug’. bug’.The Thecommonest commonest cause causeisisprobably probablyGroup Group AA Streptococcus Streptococcusbut butit itcan canalso also bebecaused causedbybyClostridium, Clostridium,Escherichia Escherichiacoli, coli,Klebsiella Klebsiellaand and Aeromonas Aeromonashydrophila hydrophilaand andStaphylococcus Staphylococcusaureus, aureus,many manyofof which whichhave haveantibiotic antibioticresistant resistantstrains. strains.The Thebacteria bacteriaattack attackthin thin layers layers(fasciae) (fasciae)and andproduce producetoxins toxinsthat thatcan candamage damageand andkillkill surrounding surroundingtissue. tissue. • •The Thedamage damagetototissue tissuecan canrestrict restrictblood bloodflow flowand andprevent preventthe the antibiotic antibioticreaching reachingallallareas areasofofdead deadtissue tissuesosothe thedead deadtissue tissue frequently frequentlyhas hastotobebesurgically surgicallyremoved removedeven eventotothe theextent extentofof removing removinglimbs. limbs.Healthy Healthypeople peoplevery veryrarely rarelyget getthe thedisease; disease; it itisisnormally normallythose thosewith withananunderlying underlyinghealth healthcondition conditionand anda a lowered loweredimmune immuneresponse. response.It Itisisnot notcaught caughtbybycontact contactwith withanan infected infectedperson. person. s uch h ese ain. n. TF F TF F TF F TF F TF F TF F TF F TF F TF F TF F TF F (b) (b) (i)(i) Comment Commentononthe thedifficulty difficultyofofdefining definingviruses virusesasasliving living organisms. organisms. (iii) (iii)Name Nametwo twodiseases diseasescaused causedbybyviruses. viruses. (iv) (iv)Give Giveananexample exampleofofa abeneficial beneficialapplication applicationofofa avirus. virus. (v)(v) What Whatisisananantibiotic? antibiotic? (vi) (vi)Antibiotics Antibioticsshould shouldnot notbebeprescribed prescribedforfora aperson personsuffering suffering from froma aviral viralinfection. infection. Suggest Suggesta areason reasonforforthis. this. (c) (c) (i)(i) What Whatisismeant meantbybythe theterm termimmunity? immunity? (ii)(ii) Outline Outlinebriefly brieflythe therole roleofofB Blymphocytes lymphocytesininthe thehuman human immune immunesystem. system. (iii) (iii)Distinguish Distinguishbetween betweenactive activeand andpassive passiveimmunity. immunity. (iv) (iv)“Vaccination “Vaccinationgives givesrise risetotoactive activeimmunity”. immunity”.Explain Explainthis this statement. statement. (v)(v) InIncertain certainsituations situationsa aperson personisisgiven givena aspecific specificantibody antibody rather ratherthan thanbeing beingvaccinated. vaccinated. 1.1.IsIsthis thisananexample exampleofofactive activeororpassive passiveimmunity? immunity? 2.2.Under Underwhat whatcircumstances circumstancesmight mightananantibody, antibody,rather rather than thana avaccination, vaccination,bebegiven? given? 3.3.Comment Commentononthe theduration durationofofimmunity immunitythat thatfollows followsthe the administration administrationofofananantibody. antibody. Leaving LeavingCertificate CertificateBiology Biology(HL) (HL)2005, 2005,Q.Q.1515(b) (b) (i)(i) Draw Drawand andlabel labela adiagram diagramtotoshow showthe thebasic basicstructure structureofof a atypical typicalbacterial bacterialcell. cell. (ii)(ii) Other Otherthan thanbeing beingprokaryotic, prokaryotic,state statetwo twoways waysininwhich which a atypical typicalbacterial bacterialcell celldiffers differsfrom froma atypical typicalhuman humancell cell (e.g. (e.g.cell cellfrom fromcheek cheeklining). lining). (iii) (iii)Describe Describehow howsome somebacteria bacteriarespond respondininorder ordertotosurvive survive when whenenvironmental environmentalconditions conditionsbecome becomeunfavourable. unfavourable. (iv) (iv)What Whatisismeant meantwhen whena abacterium bacteriumisisdescribed describedasas being beingpathogenic? pathogenic? (v)(v) What Whatare areantibiotics? antibiotics?Use Useyour yourknowledge knowledgeofofthe theTheory Theoryofof Natural NaturalSelection Selectiontotoexplain explainthe thepossible possibledanger dangerinvolved involvedinin the themisuse misuseofofantibiotics. antibiotics. Antibiotic Resistance Biographical BiographicalNotes Notes Ernest ErnestDuchesne Duchesne(1874-1912) (1874-1912) InInhis hisdoctoral doctoralthesis thesispublished publishedinin1897, 1897, the theFrench Frenchphysician, physician,Ernest ErnestDuchesne Duchesne showed showedthat thatthe thefungus fungusPenicillium Penicillium glaucum glaucumhad hadthe theability abilitytototreat treatsome some bacterial bacterialinfections. infections.He Hecarried carriedout outhis his experiments experimentsononguinea guineapigs pigsand andsuggested suggested that thatthe thetoxin toxinproduced producedbybythe thefungus funguscould could possibly possiblybebeused usedtototreat treathumans. humans.After Aftergraduation graduationhehejoined joinedthe the army armyand anddid didnot notcontinue continuethe theresearch. research. Like Likemany manygood goodideas ideasthese thesewere werestated statedand anddiscovered discoveredbefore before the thescientific scientificcommunity communitywas wasfarfarenough enoughadvanced advancedtotofully fully understand understandthe theimplications. implications.Fleming Flemingwas waslucky luckytotonotice noticethe the same samething thingatatjust justthe theright righttime timeand andthus thushehegot gotallallthe theglory. glory. Duchesne Duchesnedied diedofoftuberculosis tuberculosisatatthe theyoung youngage ageofof37. 37. Revise ReviseThe TheTerms Terms Can Canyou yourecall recallthe themeaning meaningofofthe thefollowing followingterms? terms? Revising Revisingterminology terminologyisisa apowerful powerfulaid aidtotorecall recalland andretention. retention. antibiotics, antibiotics,antimicrobial antimicrobialresistance resistance(AMR), (AMR),bacteria, bacteria,bactericidal, bactericidal, bacteriostatic, bacteriostatic,broad broadspectrum, spectrum,broad broadspectrum spectrumantibiotics, antibiotics, Clostridium Clostridiumdifficile, difficile,fungi fungiand, and,Gram Grampositive, positive,metabolic metabolicpathways, pathways, microbes, microbes,micro-organism, micro-organism,MRSA, MRSA,narrow narrowspectrum spectrumantibiotics, antibiotics, pathogenic, pathogenic,plasmids, plasmids,protozoa, protozoa,residues, residues,Staphylococcus, Staphylococcus, sulphonamides, sulphonamides,Tetracyclines, Tetracyclines,tuberculosis, tuberculosis,vaccination. vaccination. Check Checkthe theGlossary Glossaryofofterms termsfor forthis thislesson lessonon onwww.sta.ie www.sta.ie
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