S2 Table. Dominant fungal species significantly different between the two nematode species regardless of the
soils (average ± SEM). Only species with a relative abundance > 0.1% are displayed. Significance was inferred
using a negative binomial regression and generalized linear model fit (nbGLM). A Likelihood ratio test was used,
complemented with a post-hoc false discovery rate multiple correction test (LHR FDR, P < 0.05). Analysis was
done using the EdgeR package.
Ascomycota
Phylum
Basidiomycota
Chytridiomycota
Ascomycota
Fungi (unid.)
Basidiomycota
Zygomycota
Family
Ascomycota (unid.)
Ascomycota (unid.)
Chaetomiaceae
Chaetomiaceae
Chaetomiaceae
Cordycipitaceae
Davidiellaceae
Dothideomycetes
Dothioraceae
(unid.)
Helotiales (i.sedis)
Helotiales (i.sedis)
Hyaloscyphaceae
Hypocreales (i.sedis)
Mycosphaerellaceae
Nectriaceae
Nectriaceae
Onygenaceae
Pezizales (i.sedis)
Plectosphaerellaceae
Plectosphaerellaceae
Pleosporaceae
Pleosporaceae
Pleosporaceae
Pleosporales (unid.)
Pyronemataceae
Pyronemataceae
Saccharomycetales
Sordariales
(unid.)
(i.sedis)
Sordariomycetes
Trichocomaceae
(unid.)
Trichocomaceae
Sordariomycetes
Tremellales (i.sedis)
Tremellales (i.sedis)
Rhizophlyctidaceae
Rhizophydiaceae
Fungi (unid.)
Davidiellaceae
Davidiellaceae
Hypocreaceae
Hypocreales (i.sedis)
Saccharomycetales
Taphrinaceae
(i.sedis)
Trichocomaceae
Trichocomaceae
Trichocomaceae
unidentified
Xylariaceae
Malasseziaceae
Malasseziaceae
Marasmiaceae
Mortierellaceae
Species
SH212862.07FU
SH210351.07FU
Chaetomium jatrophae
Humicola grisea
Chaetomium aterrimum
Cordyceps bassiana
Cladosporium exasperatum
unidentified
Aureobasidium pullulans
Tetracladium maxilliforme
unidentified
Mycoarthris corallina
Myrothecium roridum
Pseudocercosporella
SH219102.07FU
chaenomelis
SH220702.07FU
Chrysosporium lobatum
Cephaliophora tropica
Lectera longa
Plectosphaerella alismatis
Stemphylium herbarum
Alternaria alternata
Chalastospora ellipsoidea
unidentified
unidentified
Pseudaleuria sp.
Candida tropicalis
unidentified.
unidentified
Penicillium chrysogenum
Penicillium aurantiogriseum
unidentified
Cryptococcus heimaeyensis
Hannaella oryzae
Rhizophlyctis rosea
Rhizophydium sp.
unidentified
Cladosporium haerospermum
Cladosporium halotolerans
Trichoderma asperellum
unidentified
Debaryomyces nepalensis
Taphrina padi
Penicillium brevicompactum
Aspergillus niger
Penicillium novae-zeelandiae
Pleosporales sp.
Hypoxylon howeanum
Malassezia SH176396.07FU
Malassezia SH176395.07FU
Baeospora myosura
Mortierella alpina
Pratylench
us
0.03±0.01a
0.01±0.01a
0.01±0.002
0.02±0.01a
a
0.02±0.01a
0.01±0.01a
0.01±0.003
a0.01±0.003
a1.04±1.04b
1.54±1.53b
0.96±0.96b
0.47±0.47b
0.9±0.9b
0.65±0.49b
0.21±0.21b
63.35±4.76
0.12±0.12b
b
2.12±2.11b
0.37±0.37b
2.77±2.61b
0.31±0.31b
1.7±1.69b
1.47±1.46b
Meloidogy
ne
0.49±0.49b
0.49±0.47b
1.37±1.25b
0.13±0.11b
0.3±0.3b
0.3±0.3b
9.16±3.01b
1.15±1.15b
1.91±1.25b
5.2±4.57b
0.92±0.91b
0.48±0.47b
0.11±0.11b
0.41±0.41b
1.9±1.89b
6.15±3.52b
0.31±0.31b
0.63±0.63b
1.54±1b
0.18±0.11b
5.08±2.6b
10.95±7.36
0.38±0.33b
b
0.9±0.9b
0.49±0.49b
0.39±0.39b
3.65±3.64b
1.3±0.83b
0.75±0.52b
3.51±2.31b
2.14±2.09b
4.59±2.63b
2.75±2.74b
3.47±3.47b
0.12±0.12b
0.18±0.18b
0.3±0.3b
1.77±1.72a
0.01±0.01a
0.01±0a
-
Adj. FDR
pv
3.91E-05
1.77E-04
9.27E-05
2.04E-03
4.17E-03
6.64E-03
1.77E-04
7.14E-05
5.59E-05
7.14E-05
3.41E-03
5.05E-05
0.013
5.05E-05
9.27E-05
2.12E-04
5.55E-03
3.17E-03
3.82E-05
3.61E-03
3.91E-05
6.20E-05
1.77E-04
3.61E-03
3.61E-03
5.55E-03
7.14E-05
1.00E-04
4.17E-03
4.57E-05
7.34E-05
2.12E-04
1.54E-05
5.05E-05
0.012
6.64E-03
5.62E-05
3.82E-05
1.51E-03
5.50E-05
3.91E-05
3.91E-05
3.82E-05
5.44E-03
8.49E-03
0.037
2.96E-04
5.62E-05
5.47E-05
4.17E-03
1.07E-03
4.57E-05