This article was downloaded by: [Universita' Milano Bicocca] On: 22 May 2013, At: 23:45 Publisher: Taylor & Francis Informa Ltd Registered in England and Wales Registered Number: 1072954 Registered office: Mortimer House, 37-41 Mortimer Street, London W1T 3JH, UK Systematics and Biodiversity Publication details, including instructions for authors and subscription information: http://www.tandfonline.com/loi/tsab20 Systematics of the coral genus Craterastrea (Cnidaria, Anthozoa, Scleractinia) and description of a new family through combined morphological and molecular analyses Francesca Benzoni a b a c , Roberto Arrigoni , Fabrizio Stefani & Jarosław Stolarski d a Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126, Milan, Italy b Institut de Recherche pour le Développement, UMR227 CoReUs2, 101 Promenade Roger Laroque, BP A5, 98848 Nouméa Cedex, New Caledonia c Water Research Institute-National Research Council (IRSA-CNR), Via del Mulino 19, 20861, Brugherio (MB), Italy d Institute of Paleobiology, Polish Academy of Sciences, Twarda 51/55, PL-00–818, Warszawa, Poland Published online: 19 Dec 2012. To cite this article: Francesca Benzoni , Roberto Arrigoni , Fabrizio Stefani & Jarosław Stolarski (2012): Systematics of the coral genus Craterastrea (Cnidaria, Anthozoa, Scleractinia) and description of a new family through combined morphological and molecular analyses, Systematics and Biodiversity, 10:4, 417-433 To link to this article: http://dx.doi.org/10.1080/14772000.2012.744369 PLEASE SCROLL DOWN FOR ARTICLE Full terms and conditions of use: http://www.tandfonline.com/page/terms-and-conditions This article may be used for research, teaching, and private study purposes. Any substantial or systematic reproduction, redistribution, reselling, loan, sub-licensing, systematic supply, or distribution in any form to anyone is expressly forbidden. The publisher does not give any warranty express or implied or make any representation that the contents will be complete or accurate or up to date. 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Systematics and Biodiversity (2012), 10(4): 417–433 Research Article Systematics of the coral genus Craterastrea (Cnidaria, Anthozoa, Scleractinia) and description of a new family through combined morphological and molecular analyses FRANCESCA BENZONI1,2, ROBERTO ARRIGONI1, FABRIZIO STEFANI3 & JAROSŁAW STOLARSKI4 Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 1 Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy Institut de Recherche pour le Développement, UMR227 CoReUs2, 101 Promenade Roger Laroque, BP A5, 98848 Nouméa Cedex, New Caledonia 3 Water Research Institute-National Research Council (IRSA-CNR), Via del Mulino 19, 20861 Brugherio (MB), Italy 4 Institute of Paleobiology, Polish Academy of Sciences, Twarda 51/55, PL-00–818, Warszawa, Poland 2 (Received 14 August 2012; revised 17 October 2012; accepted 24 October 2012) The monotypic genus Craterastrea was assigned to the family Siderastreidae owing to the similarity of its septal micromorphology to that of Coscinaraea. Subsequently, it was synonymized with Leptoseris, family Agariciidae, based on corallum macromorphology. Since then, it has remained poorly studied and has been known only from a small number of specimens from relatively deep reef environments in the Red Sea and the Chagos archipelago, northern Indian Ocean. Access to museum collections enabled examination of type material and the recovery of coral skeletons from the Seychelles, Madagascar, and Mayotte, southern Indian Ocean. A recent survey in Mayotte allowed the in situ imaging of Craterastrea in shallow and turbid reef environments and sampling for molecular analyses. The molecular analyses were in agreement with the examination of micromorphology and microstructure of skeletons by revealing that Craterastrea levis, the only species in the genus, differs much from Leptoseris foliosa, with which it was synonymized. Moreover, Craterastrea is closely related to Coscinaraea, Horastrea and Anomastraea. However, these genera, currently ascribed to the Siderastreidae, are genetically distant to Siderastrea, the family’s type genus, and Pseudosiderastrea. Hence, we restore the genus Craterastrea, describe the new family Coscinaraeidae due to its deep evolutionary divergence from the Siderastreidae, and provide revised diagnoses of the four genera in the family. The description of the new family Coscinaraeidae is a further step in the challenging but ongoing process of revision of the taxonomy of scleractinian corals as a result of the molecular systematics revolution. Key words: Anomastraea irregularis, COI, Coscinaraea monile, Coscinaraeidae, Craterastrea levis, Horastrea indica, Leptoseris foliosa, microstructure, new family, rDNA, Siderastreidae Introduction Scleractinian coral systematics is undergoing a considerable revolution due to current progress in molecular phylogenetics. Molecular analyses have indicated that the order Scleractinia is divided into three major clades i.e. the Robust, Complex and Basal clades (Romano & Palumbi, 1996; Romano & Cairns, 2000; Chen et al., 2002; Fukami et al., 2004, 2008; Le Goff-Vitry et al., 2004; Kerr, 2005; Nunes et al., 2008; Kitahara et al., 2010; Huang et al., 2011; Stolarski et al., 2011). Phylogenetic analyses have shown that many traditional families and genera are para- or Correspondence to: Francesca Benzoni. E-mail: francesca. [email protected] ISSN 1477-2000 print / 1478-0933 online C 2012 The Natural History Museum http://dx.doi.org/10.1080/14772000.2012.744369 polyphyletic. For example, based on concordant results from different nuclear and mitochondrial markers, the family Siderastreidae is deeply polyphyletic (Fukami et al., 2008; Huang, 2012), with Siderastrea Blainville, 1830 (the family’s type genus) and Pseudosiderastrea Yabe & Sugiyama, 1935 being closely related (Pichon et al., 2012). These genera belong to the Complex clade (Romano & Cairns, 2000; Chen et al., 2004; Benzoni et al., 2007), whereas the other genera still recognized in the family (Horastrea Pichon, 1971, Anomastraea Marenzeller, 1901, Coscinaraea Milne Edwards & Haime, 1848) belong to the Robust clade and are closely related to the Fungiidae Dana, 1846 (Benzoni et al., 2007, 2012; Kitahara et al., 2010; Huang, 2012) (see Discussion and Fig. 47). Conversely, although monophyly of the family Agariciidae is being Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 418 F. Benzoni et al. questioned with respect to the placement of Pachyseris Milne Edwards & Haime, 1849 (Fukami et al., 2008) and Coeloseris Vaughan, 1918 (Kitahara et al., in press), it has recently gained the deep-water coral genus Dactylotrochus Wells, 1954 (Kitahara et al., in press), with all taxa ascribed to it belonging to the Complex Clade (Huang, 2012). Huang (2012) included Craterestrea ( = Craterastrea) levis in a cladogram of scleractinian corals in the Robust clade of the tree of life of the order Scleractinia. However, no molecular data were available for this taxon and the author included it in the super tree based on morphological data. In this tree the genus appears most closely related to Coscinaraea and Psammocora, and then to Horastrea, Anomastraea and Pseudosiderastrea, while Siderastrea is placed in the Complex clade (Huang, 2012). However, formal taxonomic actions were not undertaken as in many cases where molecular analyses have proven the inadequacy of the traditional taxonomy, with some notable recent exceptions (e.g. Gittenberger et al., 2011; Benzoni et al., 2012; Budd et al., in press; Kitahara et al., in press). The monotypic genus Craterastrea was described by Head (1983) in the family Siderastreidae Vaughan & Wells, 1943 due to the similarity of its septal micromorphology to that of Coscinaraea. Head (1983) based his description on material from Egypt previously identified as Leptoseris hawaiiensis Vaughan, 1907 (Agariciidae Gray, 1847) by Matthai (1948) and Ma (1959) and on specimens he collected in Sudan (Head, 1983). He provided detailed illustrations of the new taxon’s typical macro and micromorphology. The species was later reported again from the Red Sea and from the Chagos archipelago in the Indian Ocean (Fig. 1) (Sheppard, 1980, 1981, 1987, 1998b; Sheppard & Sheppard, 1991). The majority of known records of C. levis are from deep reef environments (below 35 m) (Head, 1983; Sheppard & Sheppard, 1991) with the exception of one specimen from 5 m from ‘dimly lit turbid waters’ in the harbour of Port Sudan (Head, 1983). Despite illustrations of the skeleton in the original description of the taxon (Head, 1983) including SEM images to show the differences between Craterastrea levis and Leptoseris glabra Dinesen, 1980, Veron (1993) decided that C. levis is a junior synonym of Leptoseris foliosa Dinesen, 1980. This decision led de facto to the synonymy of the monotypic genus Craterastrea with the agariciid Leptoseris Milne Edwards & Haime, 1849. These synonymies have not been contradicted (Veron, 1995, 2000; UNEP-WCMC, 2005) and have never been reassessed. Today, in the era of online taxonomic databases, Craterastrea is recognized as a valid taxon by the World Register of Marine Species (WoRMS, 2012) following Sheppard (1998b). However, in the CITES list of coral species (CITES, 2011), which is used for the regulation of international commercial trade of endangered species, Craterastrea is considered a synonym of Leptoseris (UNEP-WCMC, 2012), thus accepting Veron’s (1993, 2000) decision. Along the same lines, there is simply ‘no Figs 1–2. Geographic distribution of Craterastrea levis: 1, species records in the Indian Ocean; 2, sampling localities of C. levis at Mayotte Island. Star indicates the position of the type locality, circles of the sampling locality of museum specimens, squares of specimens collected in Mayotte during the Tara Oceans expedition. entries found’ when searching Craterastrea in the IUCN Red List of threatened species (IUCN, 2012). In the present study, we examined the status of the genus Craterastrea and its significance for formalizing sections of the molecular family tree of Scleractinia. After reexamination of the Craterastrea levis type material, a survey was conducted in the Scleractinia collections of some natural history museums with major coral collections searching for specimens identified as Leptoseris but showing Craterastrea morphology. Subsequently, C. levis was sampled for genetic and morphologic analyses during the Tara Oceans scientific expedition to Mayotte (Fig. 2). Hence, we addressed for this first time the phylogenetic relationships between Craterastrea levis and Leptoseris foliosa and with the other genera in the Siderastreidae by using a mitochondrial (COI) and a nuclear (rDNA) marker, and macromorphological, micromorphological, and microstructural data. A new family was established to accommodate the genera previously ascribed to the Siderastreidae that belong to the Robust clade. Materials and methods Museum collections and other examined specimens Type material and other specimens (including thin sections) examined are deposited in the institutes listed hereafter. Abbreviations: BMNH The Natural History Museum (formerly British Museum of Natural History), London, UK IRD Institut de Recherche pour le Développement, Nouméa, New Caledonia MNHN Muséum National d’Histoire Naturelle, Paris, France Systematics of Craterastrea and description of the Coscinaraeidae Fam. nov. Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 MTQ Museum of Tropical Queensland, Townsville, Australia RMNH Naturalis Biodiversity Center (formerly Rijksmuseum van Natuurlijke Historie, Leiden), Leiden, the Netherlands TWCMS Tyne and Wear Museums (Natural Sciences) Chagos (Indian Ocean) Coral Collection, Newcastle upon Tyne, UK UNIMIB Università di Milano-Bicocca, Milan, Italy USNM United States National Museum of Natural History, Washington, DC, USA ZMUC Zoological Museum, University of Copenhagen, Copenhagen, Denmark ZPAL Institute of Paleobiology, Polish Academy of Sciences, Poland Type specimens of Craterastrea levis, Leptoseris foliosa, Coscinaraea monile and Horastrea indica were examined. The holotype of Anomastraea irregularis could not be located, but other specimens from South Africa and Yemen were studied instead. Furthermore, original descriptions and illustrations of these taxa were used. Sampling Craterastrea levis was sampled in Mayotte in May 2010 during the third leg of the Reef Biodiversity project of the Tara Oceans scientific expedition (Karsenti et al., 2011) (Fig. 2). Leptoseris foliosa was collected in New Caledonia during the first author’s stay at the Institut de Recherche and Développement in Nouméa (IRD) in 2011. Digital images of living corals in the field were taken with a Canon G9 in an Ikelite underwater housing system. Coral specimens were collected, tagged and from each selected specimen a fragment of c. 1 cm2 was broken off and preserved in absolute ethanol for molecular analysis. The remaining corallum was placed for 48 hours in sodium hypochlorite to remove all soft parts, rinsed in fresh water and dried for microscopic observation. Images of the cleaned skeletons were taken with a Canon G9 digital camera. Molecular analyses Extraction of coral DNA was performed using a Qiagen R Blood & Tissue kit (Qiagen Inc., Valencia, CA, DNeasy USA). DNA concentration of extracts was quantified using a Nanodrop 1000 spectrophotometer (Thermo Scientific, Wilmington, DE, USA). The cytochrome c oxidase subunit I gene (COI) and a portion of rDNA (a fraction of ITS2 and 5.8S) were amplified and sequenced to infer phylogenetic relationships of the genus Craterastrea at family and species level, respectively. A COI fragment of about 650 bp was amplified using coral-specific COI primers MCOIF and the protocol by 419 Fukami et al. (2004). Amplification of an rDNA portion of about 700 bp was performed using the coral specific primer A18S (Takabayashi et al., 1998) and the universal primer ITS4 (White et al., 1990) following the protocol by Benzoni et al. (2011). PCR products were purified and sequenced by Macrogen Inc. (Seoul, South Korea), using the same primers that had been used for the PCR reaction. The newly obtained mitochondrial and nuclear sequences of Craterastrea levis and Leptoseris foliosa were aligned with homologous sequences of the family Siderastreidae obtained from previous works (Benzoni et al., 2007, 2010; Stefani et al., 2007) and with sequences of the families Agariciidae and Fungiidae published by Fukami et al. (2008) and Gittenberger et al. (2011). Tubastraea aurea (Complex clade) was selected as a suitable outgroup given its higher divergence from the examined taxa (Fukami et al., 2008). Chromatograms were viewed, edited and assembled using CodonCode Aligner 3.7.0 (CodonCode Corporation, Dedham, MA, USA). Sequences were aligned with the default parameters of BioEdit Sequence Alignment Editor 7.0.9.1 (Hall, 1999). Indels, invariable and parsimony informative sites were detected with DnaSP 5.10.01 (Librado & Rozas, 2009). Indels were treated as a fifth character in phylogenetic analyses. Analyses for phylogenetic inference were conducted using three methods: maximum parsimony (MP), Bayesian inference (BI) and maximum likelihood (ML). To examine whether the sequences from the two loci should be combined in a single analysis, a partition-homogeneity test was run in PAUP∗ 4.0b10 (Swofford, 2003), and significance was estimated by 1000 repartitions. This test, described as the incongruence-length divergence test by Farris et al. (1995), indicated no conflicting phylogenetic signals between the datasets (P = 0.95). Therefore, COI and rDNA were linked and datasets from both molecular markers were concatenated into a single data matrix. Maximum parsimony analysis was performed with PAUP∗ 4.0b10, with heuristic searches using stepwise addition and performing tree-bisection-reconnection (TBR) branch swapping. Consistence in the nodes was assessed by 500 bootstrap replicates with random addition of taxa. The software MrModeltest2.3 (Nylander, 2004) in conjunction with PAUP∗ 4.0b10 were used to select nucleotide substitution models. The best model estimated by the Akaike Information Criterion (AIC) was General Time Reversible rate matrix with a proportion of sites being invariant and the remainder following a gamma distribution (the GTR+I+ model). Bayesian inference analyses were conducted using MrBayes 3.1.2 (Huelsenbeck & Ronquist, 2001; Ronquist & Huelsenbeck, 2003). Two independent runs for four Markov chains were conducted for 2.7 million generations, and the tree was sampled every 10 generations. Based on checking the parameter estimates and convergence using Tracer 1.5 (Drummond & Rambaut, 2007), the first 67 501 trees were discarded as burn-in. A Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 420 F. Benzoni et al. Fig. 3. Bayesian tree of the combined rDNA and COI datasets. Posterior Bayesian probabilities (> 70%), MP and ML bootstrap values (> 50%) are shown at nodes. Dashes (-) indicate nodes that are statistically unsupported. maximum likelihood (ML) tree was calculated with PhyML 3.0 (Guindon & Gascuel, 2003) using the default parameters and the robustness of the phylogeny were tested by 500 bootstrap replications. terminology of skeletal macro-structures in Leptoseris we referred to Dinesen (1980). Results Morphological analyses Phylogenetic analyses Both macro and micromorphological characters (sensu Budd & Stolarski, 2009) of Craterastrea levis and Leptoseris foliosa were examined using light microscopy (Zeiss Stemi DV4 stereo-microscope) and SEM, respectively. For SEM, specimens were mounted using silver glue, sputtercoated with conductive gold film and examined using a Vega Tescan Scanning Electron Microscopy at the SEM Laboratory, University of Milano-Bicocca, and a FEI XL20 Scanning Electron Microscopy at the Institute of Paleobiology, Polish Academy of Sciences. For microstructural observations the skeletal material was fixed with araldite and polished with aluminium oxide (Buehler TOPOL 3 final polishing suspension with particle size 0.25 μm). For COI and rDNA sequences were obtained for a total of four samples, two of Craterastrea levis (MY095 and MY305) and two of Leptoseris foliosa (HS2854 and HS2873). The final concatenated alignment consisted of 50 sequences (Table 1) and 783 pb, of which 455 bp for COI, 220 bp for ITS2 and 108 bp for 5.8S region. 211 nucleotide sites were variable and 177 parsimony informative, with a total of 304 mutations. BI, MP and ML methods produced similar topologies, with no contrasting signals. Bayesian topology with branch support indicated by Bayesian posterior probability scores (PPBI ), MP bootstrapping support (BTMP ) and ML bootstrapping support (BTML ) is reported in Fig. 3. Systematics of Craterastrea and description of the Coscinaraeidae Fam. nov. 421 Table 1. Specimens included in the molecular analyses (Fig. 40). For each specimen the collection code (if available), the identification and the COI and rDNA EMBL sequence codes are given. Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 CODE HS2854 HS2873 UNIMIB-TO MY095 UNIMIB-TO MY305 K124 K131 K122 K117 RE516 RE518 W600 Y219 I110 M48 I97 M26 W613 HS1376 M43 M7 M18 MA254 - Species COI rDNA Leptoseris foliosa Leptoseris foliosa Craterastrea levis Craterastrea levis Tubastraea aurea Siderastrea radians Siderastrea siderea Siderastrea stellata Gardineroseris planulata Pavona cactus Oulastrea crispata Anomastraea irregularis Anomastraea irregularis Coscinaraea monile Coscinaraea monile Horastrea indica Horastrea indica Coscinaraea columna Psammocora albopicta Psammocora contigua Psammocora contigua Psammocora haimiana Psammocora haimiana Psammocora digitata Psammocora digitata Psammocora nierstraszi Psammocora profundacella Psammocora profundacella Psammocora nierstraszi Cycloseris costulata Cycloseris cyclolites Ctenactis albitentaculata Ctenactis echinata Danafungia scruposa Fungia fungites Halomitra pileus Heliofungia actiniformis Heliofungia fralinae Herpolitha limax Lithophyllon concinna Lithophyllon undulatum Lobactis scutaria Pleuractis granulosa Pleuractis paumotensis Podabacia crustacea Podabacia motuporensis Polyphyllia talpina Sandalolitha dentata Sandalolitha robusta Zoopilus echinatus HE978506 HE978507 HE978510 HE978509 AB441235 AB441212 AB441211 AB441213 AB441218 AB441216 AB441197 AM494869 AM494870 AM494859 AM494858 AM494864 AM494865 HE978508 FM865871 AM494849 AM494847 AM494856 AM494855 FM865876 FM865873 FM865878 AM494853 FM865879 AM494850 EU149890 EU202719 EU149869 EU149899 EU149872 EU149892 EU149875 EU149885 EU149901 EU149886 EU149893 EU149887 EU149862 EU149884 EU149911 EU149907 EU149898 EU149915 EU149918 EU149917 EU149916 HE978501 HE978502 HE978505 HE978504 AY722796 AY322604 AY322603 AB441407 AB441409 AB441408 AY722781 AM230624 AM231716 AM230599 AM230598 AM230605 AM230605 HE978503 FM986360 AM230604 AM230602 FM986368 AM749206 FM986371 FM986361 AM230606 AM230617 AM230619 AM230601 EU149820 EU149821 EU149813 EU149817 EU149827 EU149829 EU149838 EU149839 EU149825 EU149841 EU149832 EU149844 EU149830 EU149835 EU149850 EU149845 EU149846 EU149853 EU149856 EU149857 EU149858 Siderastrea, the type genus of the family Siderastreidae, is highly divergent from the other Siderastreidae (sensu Veron, 2000). All the species of Siderastrea included in this phylogenetic tree, namely S. radians (Pallas, 1766), S. siderea (Ellis & Solander, 1786), and S. stellata Verrill, 1868, form a very well-supported group (PPBI , BTMP , BTML = 100, Fig. 3), previously indicated as clade IX by Fukami et al. (2008). Leptoseris foliosa clusters together with the genera Pavona Lamarck, 1801 and Gardineroseris Scheer & Pillai, 1974 in the Agariciidae clade. Within the Robust, clade XI of Fukami et al. (2008) contains a large number of species split into three major Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 422 F. Benzoni et al. Figs 12–15. Different corallum morphology of Craterastrea levis specimens sampled for this study: 12, UNIMIB TO–MY098 (same specimen shown in Figs 5, 23); 13, UNIMIB TO–MY148 (same specimen shown in Fig. 7); 14, top view of specimen UNIMIB TO–MY095 (same specimen shown in Fig. 9); 15, side view of the same specimen as 14. Scale bars represent 1 cm. Figs 4–11. In situ images of Leptoseris foliosa (4, 6, 8, 10) and Craterastrea levis (5, 7, 9, 11) showing growth forms and colouration at different stages of colony development and overall similarity between the two taxa: 4, encrusting corallum of specimen IRD HS 2861; 5, one calice corallum of C. levis showing the typical shape resembling the anthocaulus stage in the Fungiidae (UNIMIB TO–MY098; same specimen shown in Figs 12, 23); 6, encrusting corallum of L. foliosa with foliose edges (New Caledonia, Prony Bay, 20 m); 7, cyathiform colony of C. levis (UNIMIB TO–MY148; same specimen shown in Fig. 13) circular inset shows a corallite; 8, fan-shaped colony of L. foliosa (New Caledonia, Prony Bay, 15 m) circular inset shows a corallite; 9, fan-shaped colony of C. levis (UNIMIB TO–MY095; same specimen shown in Figs 14–15); 10, foliose colony of L. foliosa forming tiers of whorls (New Caledonia, Prony Bay, 10 m); 11, large colony of C. levis showing a corrugated surface due to the presence of irregular rounded protuberances (Bouéni Bay, Mayotte Island). Scale bars represent 1 cm. family-level lineages, the Siderastreidae (pars), the Psammocoridae Chevalier & Beauvais, 1987, and the Fungiidae. Oulastrea crispata (Lamarck, 1816) is a highly distinctive outgroup for these three groups and shows unresolved evolutionary relationships. Craterastrea levis is in one of the lineages, and closely related to Coscinaraea monile (Forskål, 1775), Horastrea indica Pichon, 1971, and Anomastraea irregularis Marenzeller, 1901. The average distance of Craterastrea levis from Leptoseris foliosa is 17.8 ± 1.4%, and from the Agariciidae clade is 18.2 ± 1.4%. These values are higher than the genetic distance between Craterastrea levis and other taxa in the same clade, i.e. 2.3 ± 0.4%. The sister group of this clade including all the Siderastreidae except Siderastrea is the Psammocoridae clade, comprising all the species of Psammocora included in this study and Coscinaraea columna (Dana, 1846), as already shown by Benzoni et al. (2010). The third major group, the Fungiidae clade, includes all genera of Fungiidae in agreement with Gittenberger et al. (2011) and Benzoni et al. (2012). As mentioned in the introduction, the remaining genus in the Siderastreidae, Siderastrea, is in the Complex clade. Morphological analyses A detailed description of morphological characters between Leptoseris foliosa and Craterastrea levis and their comparison is presented hereafter. Leptoseris foliosa Dinesen, 1980 (Figs 4, 6, 8, 10, 16, 18, 20, 22, 24, 25, 28–32) Leptoseris foliosa Dinesen, 1980: Plate 14 Figs 1–3; Veron, 2000. Leptoseris tenuis Yabe & Sugiyama, 1941: Pl. 62, Figs 4–4c, 5–5a, Pl. 64, Fig. 1; Veron & Pichon, 1980: Figs 115–20, 742. TYPE MATERIAL: The holotype (BM 1979.4.6.1) and two paratypes are deposited at the BMNH, 6 paratypes at the Queensland Museum, 1 at the USNM. TYPE LOCALITY: Lizard Island, Australia. Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 Systematics of Craterastrea and description of the Coscinaraeidae Fam. nov. 423 Figs 24–27. Comparison of patterns of septal structures in Leptoseris foliosa (24, 25) and Craterastrea levis (26, 27): 24, X shaped crossing of septocostae in L. foliosa (IRD HS 346); 25, detail of 24 showing rounded septa granulations in L. foliosa; 26, X shaped crossing of interstomatous septa in C. levis (UNIMIB TO–MY095); 27, detail of 26 showing septal paddles perpendicular to the septum direction with granules finely ornamented by multiple spikes. Scale bars represent: Figs 24, 26, 5 mm; Figs 25, 27, 200 μm. Figs 16–23. Comparison of skeleton morphology of Leptoseris foliosa (16, 18, 20, 22) and Craterastrea levis (17, 19, 21, 23): 16, corallite arrangement in L. foliosa IRD HS 2903; 17, corallite arrangement in C. levis USNM 82530; 18, protocorallite (larger in the centre) and other corallites in L. foliosa IRD HS 2855; 19, protocorallite (larger in the centre) and other corallites in C. levis RMNH 19147; 20, corallites of L. foliosa IRD HS 346; 21, corallites of C. levis UNIMIB TO–MY096; 22, detail of protocorallite in L. foliosa (same specimen as Fig. 18); 23, detail of protocorallite in C. levis UNIMIB TO–MY098 (same specimen as Figs 5, 12). Dashed circles in 18 and 20 indicate the corallite outline. Scale bars represent 5 mm. OTHER EXAMINED MATERIAL: MTQ G 43565 Australia; IRD HS 283 Prony Bay, Anse Sebert, 20 m (28/8/1986) coll. P. Laboute; IRD HS 346 Prony Bay, Grande Rade Est, 10 m (10/2/1987) coll. G. Bargibant; IRD HS 351 Prony Bay, Ilôt Casy, 15 m (9/2/1987) coll. J.L. Menou; IRD HS 352 Prony Bay, Ilôt Casy, 12 m (9/2/1987) coll. J.L. Menou; IRD HS 872 Prony Bay, Ilot Casy (9/2/1987); IRD HS 2682 IRD ST0033, 16 m (9/6/2009) coll. G. Lasne; IRD HS 2680 IRD ST0033, 16 m (9/6/2009) coll. G. Lasne; IRD HS 2854 Prony Bay, IRD ST 117, 20 m (23/2/2011) coll. F. Benzoni, E. Folcher & A. Renaud; IRD HS 2855 Prony Bay, IRD ST 117, 15 m (23/2/2011) coll. F. Benzoni, E. Folcher & A. Renaud; IRD Figs 28–32. Micromorphology and microstructure of Leptoseris foliosa: 28, top view of part of a corallite and septocostae (rectangle indicates the part shown in 29); 29, detail of 28 showing clusters of Centres of Rapid Accretion aligned on lateral septal faces to form more or less continuous lists (menianae) (arrows) parallel to the septum direction (dashed line); 30, longitudinal view of septa, arrows indicate menianae running along septal side (circle indicates the part shown in 31); 31, enlargement of 30 showing close up of menianae; 32, longitudinal etched section of septum showing the central zone of Rapid Accretion Deposits form regular branches (dashed lines) towards the menianae. Occurrence of menianae/aligned granulations parallel to the septum is typical of agariciids which form well-defined clade within complex corals. All SEM images: 32, broken and etched section (ZPAL R–SCL–709) of IRD HS 2854. Scale bars represent: Fig. 28, 500 μm; Fig. 29, 200 μm; Fig. 30, 500 μm; Fig. 31, 100 μm; Fig. 32, 50 μm. Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 424 F. Benzoni et al. Figs 33–40. Micromorphology and microstructure of Craterastrea levis: 33, longitudinal section of a corallum showing highly perforated structure; 34, top view of the colony surface showing two calices; 35, paddle-like structures (arrows) perpendicular to septum direction (dashed line); 36, detail of a paddle-shaped structures formed by Clusters of Centres of Rapid Accretion (arrows), this feature is typical of many representatives of robust coral clade; 37, transverse thin section showing septal paddles (arrows); 38, transverse, etched sections of septa showing Rapid Accretion Deposits forming small depressions (dots); 39, longitudinal thin section; 40, detail of 39 showing how septal paddle-shaped structures are not continuous along the septum but are formed in regular manner: in longitudinal broken (33) and thin (39, 40) sections they form small platforms (arrows). SEM (33–36, 38) and optical microscope (37, 39–40) images; oblique (33), distal/transverse (34–38) and longitudinal (39, 40) views. SPECIMENS: 33, 37, 39, 40: R-SCL081; 34–36, 38: R–SCL–711. Scale bars represent: Fig. 33, 1 mm; Fig. 34, 2 mm; Fig. 35, 200 μm; Fig. 36, 100 μm; Fig. 37, 500 μm; Fig. 38, 100 μm; Fig. 39, 500 μm; Fig. 40, 100 μm. HS 2861 Prony Bay, IRD ST 117, 15 m (23/2/2011) coll. F. Benzoni, E. Folcher & A. Renaud; IRD HS 2873 Prony Bay, IRD ST 394, Prony Bay, Carenage, 5–15 m (23/2/2011) coll. F. Benzoni, E. Folcher & A. Renaud; IRD HS 2877 Prony Bay, ST 394, Carenage, 5–15 m (23/2/2011) coll. F. Benzoni, E. Folcher & A. Renaud; IRD HS 2973 Prony Bay, ST 117, 32 m (22/3/2011) coll. F. Benzoni, E. Folcher & A. Renaud. Description Corallum encrusting (Fig. 4) or with free margins forming foliose (Fig. 6) or fan-shaped (Fig. 8) colonies, sometimes forming whorls (Fig. 10). Larger colonies can be attached at the centre or at one side of the corallum. Colony surface smooth (Figs 4, 6, 16) or ridged (Figs 8, 10), with corallites found at the bottom of the valleys separating the ridges. No proximal cushions are formed although nodules unrelated to the calices can form. Corallites are arranged in concentric series around the protocorallite which is larger in diameter (Figs 18, 22). Calice outline circular in the inner part of the corallum (Fig. 18, dashed circle) and progressively more oval towards the corallum margin, with longer diameter perpendicular to the corallum radius (Fig. 20, dashed circle). The fossa is round or elliptical (Fig. 20, 22). Columella present formed by one solid boss in all the corallites (Fig. 20) except the protocorallite which can have 1–4 processes (Fig. 22). Septa unequal (Fig. 20). Septocostae equal, compact and straight (Fig. 22), sometimes fusing or dividing and forming X-shaped crossings (Fig. 24), imperforate (Fig. 30), margin ornamented with granulations (Fig. 25, 28, 29). Granulations on septal sides form elongated aggregations or merge into menianae parallel to the growing septal margin (Figs 29, 30, 31). Granulations (menianae) are produced by regular divergence of the mid-septal Rapid Accretion Deposits zone (Fig. 32). In vivo colour ranges from greenish beige to light brown with paler colony margins (Figs 4, 6, 8, 10). Craterastrea levis Head, 1983 (Figs 5, 7, 9, 11, 12–15, 17, 19, 21, 23, 26, 27, 33–40) Craterastrea levis Head, 1983: Figs 6–9, 11–14. Craterestrea levis Huang, 2012. Leptoseris hawaiiensis Matthai, 1948, Pl. 4, Figs 9, 10; Ma, 1959, Plates 26, 27. Leptoseris foliosa Veron, 1993; Veron, 2000. Coscinaraeid new gen, new sp. Sheppard, 1980. TYPE MATERIAL: The holotype (BM 1981.4.1.4) and two paratypes (BM 1981.4.1.5; BM 1981.4.1.6) are deposited at the BMNH and were examined. TYPE LOCALITY: Towartit, Port Sudan, Sudan. EXAMINED MATERIAL: BMNH 1981.4.1.4. Holotype, Towartit, Port Sudan, Sudan, 40 m (1973) coll. S. Head; BMNH 1981.4.1.5 Paratype West Harvey reef, Towartit, Port Sudan, Sudan, 37 m (1973) coll. S. Head; BMNH 1981.4.1.6 Paratype West Harvey reef, Towartit, Port Sudan, Sudan, 37 m (1973) coll. S. Head; BMNH 1950.1.11.330 Ghardaqa, Egypt, 46 m (30/7/1933) coll. C. Crossland; unregistered (collection code: TWCMS J1834) (1975) Chagos, exp. JS01 (identified as Coscinaraea); USNM 82529 Chagos Archipelago, more than 50 m (28/11/1979) coll. C. Sheppard. NEW RECORDS: USNM 82530 Eilat, Israel, 65–70 m (1972) coll. J. Lang; RMNH 19147 Seychelles, 45–55 m, dredged (identified as Leptoseris hawaiiensis); RMNH 34540 (partim) Madagascar (identified as Leptoseris foliosa); MTQ G 61808 Nosy Bé, Madagascar (January 2002) coll. JEN Veron (identified as Leptoseris foliosa); Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 Systematics of Craterastrea and description of the Coscinaraeidae Fam. nov. MTQ G 61807 Nosy Bé, Madagascar (January 2002) coll. JEN Veron (identified as Leptoseris foliosa); MNHN 20398 Tuléar, Madagascar, 30 m (14/9/1963) coll. M. Pichon (identified as Leptoseris cf incrustans); MNHN 20399 Tuléar, Madagascar, 26 m (8/9/1965) coll. M. Pichon, (identified as Leptoseris cf incrustans); MNHN 20400 Tuléar, Madagascar, 28 m (21/9/1965) coll. M. Pichon (identified as Leptoseris cf incrustans); MNHN 20401 North Grande Circle, Tuléar, Madagascar, 25–35 m (8/10/1965) coll. M. Pichon (identified as Leptoseris cf incrustans); MNHN 20402 Tuléar, Madagascar, coll. M. Pichon (identified as Leptoseris cf incrustans); MNHN 20403 Tuléar, Madagascar, coll. M. Pichon (identified as Leptoseris cf incrustans); MNHN unregistered (collection code MAY 12–122), Double barrière face N’gouja, Mayotte Island, Mission BARMAY (24/4/2005) coll. G. Faure (identified as Leptoseris cf incrustans); MNHN unregistered Banc du Boa (collection code MAY 12–122), Mayotte Island Mission BARMAY (18/4/2005) coll. G. Faure (identified as Leptoseris cf incrustans); MNHN unregistered (collection code MAY 12–122) Bai Soud, Mamoudzu, Mayotte Island (31/5/1983) coll. G. Faure (identified as Leptoseris cf incrustans); UNIMIB TO–MY013 Mayotte Island, Site TO–MY 1 I. Blanche (12◦ S 42,981; 45◦ E 10,455) 20 m (30/5/2010) coll. F. Benzoni; UNIMIB TO–MY014 Mayotte Island, Site TO–MY 1 I. Blanche (12◦ S 42,981; 45◦ E 10,455) 15 m (30/5/2010) coll. F. Benzoni; UNIMIB TO–MY025 Mayotte Island, Site TO–MY 2 I. Verte (12◦ S 43,416; 45◦ E 8,856) 25 m (30/5/2010) coll. F. Benzoni; UNIMIB TO–MY094 Mayotte Island, Site TO–MY 11 Bouéni Bay (12◦ S 54,698; 45◦ E 7,871) 15 m (4/6/2010) coll. F. Benzoni; UNIMIB TO–MY095 Mayotte Island, Site TO–MY 11 Bouéni Bay (12◦ S 54,698; 45◦ E 7,871) 15 m (4/6/2010) coll. F. Benzoni; UNIMIB TO–MY096 Mayotte Island, Site TO–MY 11 Bouéni Bay (12◦ S 54,698; 45◦ E 7,871) 15 m (4/6/2010) coll. F. Benzoni; UNIMIB TO–MY097 Mayotte Island, Site TO–MY 11 Bouéni Bay (12◦ S 54,698; 45◦ E 7,871) 15 m (04/06/2010) coll. F. Benzoni; UNIMIB TO–MY098 Mayotte Island, Site TO–MY 11 Bouéni Bay (12◦ S 54,698; 45◦ E 7,871) 20 m (4/6/2010) coll. F. Benzoni; UNIMIB TO–MY108 Mayotte Island, Site TO–MY 13 Bouéni outer barrier (12◦ S 56,376; 45◦ E 3,256) (05/06/2010) coll. F. Benzoni; UNIMIB TO–MY120 Mayotte Island, Site TO–MY 14 (12◦ S 52,534; 45◦ E 16,834) (06/06/2010) coll. F. Benzoni; UNIMIB TO–MY148 Mayotte Island, Site TO–MY 17 Bouzi (12◦ S 48,749; 45◦ E 14,486) (7/6/2010) coll. F. Benzoni; UNIMIB TO–MY149 Mayotte Island, Site TO–MY 17 Bouzi (12◦ S 48,749; 45◦ E 14,486) (7/6/2010) coll. F. Benzoni; UNIMIB TO–MY150 Mayotte Island, Site TO–MY 17 Bouzi (12◦ S 48,749; 45◦ E 14,486) (7/6/2010) coll. F. Benzoni; UNIMIB TO–MY151 Mayotte Island, Site TO–MY 17 Bouzi (12◦ S 48,749; 45◦ E 14,486) (7/6/2010) coll. F. Benzoni; UNIMIB TO–MY305 Mayotte Island, Site TO–MY 31 Bouéni Bay 2 (12◦ S 54,698; 45◦ E 7,871) (16/6/2010) coll. F. Benzoni. 425 REMARKS: The genus is monotypic. Description The corallum is thin, unifacial, crateriform (Figs 5, 7, 9, 11) and attached to the substrate by a peduncle generally found at the centre of the undersurface (Fig. 15). In small colonies with one calice the corallum (Figs 5, 12) resembles the anthocaulus stage in free-living Fungiidae (Hoeksema, 1989: Fig. 43) but in the latter the umbrella is concave and not convex. In some colonies only part of the lamina grows and the corallum appears secondarily foliose, attached peripherally (Figs 9, 14). Colony surface is generally even (Figs 5, 9, 12, 14, 17). In some colonies irregular rounded protuberances analogous to proximal cushions in the genus Leptoseris can occur (Figs 7, 11, 13). These can either develop in correspondence with calices or far from them. The first calice is generally larger than the others, which are approximately 4 mm in diameter (Figs 19, 23). The colonial stage is reached through intratentacular budding, initially circumoral and followed by irregular marginal division (Figs 14, 19). Calices are spaced far apart over the colony surface (Fig. 13) and tend to be even sparser towards the margin of the corallum (Figs 14, 17). Although in some specimens a tendency to form concentric rows of corallites can be observed (Fig. 14), in general this is seldom observed. The calice margin is hardly detectable due to the continuity between septa between calices and their even thickness (Figs 19, 21, 23, 29). The columella is formed by multiple processes in all the corallites (Figs 21, 23) although they are more numerous, though not larger, in the protocorallite (Fig. 23). Septa and septocostae equal (Figs 21–23), perforated and straight, sometimes fusing or dividing and forming Xshaped crossings (Fig. 26). These septocostae are highly perforated (Figs 33, 37, 39, 40) and ornamented with typical septal paddles perpendicular to the septum direction (Figs 26, 27, 33, 35, 36). Each paddle consists of numerous centres of Rapid Accretion which radiate in all directions (blue arrows in Fig. 36), therefore in etched sections Rapid Accretion Deposits occur in many places (Fig. 38). The granules of the paddles are finely ornamented by multiple spikes. Septal paddles are not continuous along the septum but appear in regular manner forming small platforms (Figs 26, 37, 38). Although the platforms resemble short menianae or pennular structures of some Mesozoic corals (Morycowa & Roniewicz, 1995) they are formed in addition to predominant paddles which are perpendicular to the septal plane. Septa and septocostae are regularly connected laterally by synapticulae which form a fine and regular three-dimensional mesh with the trabeculae forming the septocostae (Fig. 33). In vivo colour ranges from greenish beige to light brown with paler colony margins (Figs 5, 7, 9, 11). Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 426 F. Benzoni et al. Although the growth forms of C. levis and L. foliosa are to a large extent overlapping, some differences were detected. Both species are colonial forming encrusting to foliose coralla. However, in L. foliosa the corallum is generally encrusting at the base and foliose in the peripheral part while in C. levis it forms crater-like colonies (Figs 12–15) (Head, 1983) starting almost as a fungiid anthocaulus stage (Hoeksema, 1989: Fig. 43). This was observed for the first time in Mayotte where a complete series of specimens was collected including single-polyp coralla (Figs 5, 12). No such one corallite stage was observed in L. foliosa, although all the presumably young colonies (few calices and rather regular in outline) we observed were encrusting. Both C. levis and L. foliosa are characterized by small calices, except the generally central protocorallite, which is larger (Figs 18, 19, 22, 23), poorly defined theca, and a thamnasterioid arrangement of the septa which can be very long (up to 10 times the calice diameter or more, especially in Craterastrea). Although calices are on average of slightly different size in the two species, larger in C. levis than in L. foliosa, their diameter ranges overlap. In L. foliosa they tend to be more evenly sized throughout the colony, while in C. levis their size can be more variable (Fig. 13). These differences are, however, difficult to detect to the naked eye because of the overall small dimensions of the calical structures and the poorly visible calice wall. In both species calices can be very far apart although in C. levis this is more often observed and their distances can be remarkably longer. Furthermore, while in L. foliosa they tend to be arranged in concentric rows and to attain a more oval outline further from the colony centre (Figs 18, 20), this is seldom observed in C. levis coralla where the general calice arrangement pattern is much less regular from the centre of the colony towards its periphery and calices are more evenly circular in outline. Nevertheless, the arrangement of the long septa is strikingly similar in both species (Figs 24, 26) and contributes to the similarity of the overall macromorphology between the two species. It is proposed that while for L. foliosa the term septocostae as defined by Dinesen (1980) is conserved, the term interstomatous septa is preferred for C. levis following the definition, and ontological explanation, given by Hoeksema (1989). Taxonomy Order Scleractinia Bourne, 1900 Family Coscinaraeidae Fam. nov. TYPE GENUS: Coscinaraea Milne Edwards and Haime, 1848. ETYMOLOGY: Named after the designated type genus Coscinaraea. DIAGNOSIS: Corallum colonial, attached. Corallites cerioid or plocoid, forming monocentric to polycentric series, wall synapticulothecal or septothecal. Septa completely or partially perforated, joined by one or more rows of synapticulae, fusing towards the fossa. Septal margin ornamentation composed of paddle-shaped spiked ridges oriented transversally to the septal plane. Septa sides granular. Columella present, papillary, formed by multiple processes (extremities of trabeculae) developing from the inner margin of the septa towards the fossa. Description The family is comprised of colonial taxa characterized by different macro-morphology, including encrusting, massive, cup-shaped or submassive colonies. The shape, size and arrangement of the corallites are very different between genera (Benzoni et al., 2007). Corallite arrangement can be plocoid or cerioid. Corallite outline is polygonal, irregular or circular, and monocentric to polycentric. Corallite wall is synapticulathecal in all genera except Horastrea which has a septothecal wall (Benzoni et al., 2007). Although petaloid septa (sensu Benzoni et al., 2010) can occasionally form at the merger of three or more calices in Coscinaraea, and can sometimes be observed also in specimens of Horastrea, they do not form in Anomastraea or Craterastrea. Rows of enclosed petaloid septa, typically found in the Psammocoridae (Benzoni et al., 2007, 2010) never form in the Coscinaraeidae. In all taxa septa are perforated, characterized by granular ornamentation on the lateral sides, and ornamented by paddle-shaped spiked ridges oriented transversally to the septal plane on the upper margin (Benzoni et al., 2007). Septa are typically joined by synapticulae and fuse within the calice towards the fossa. In all the coscinaraeids a papillary columella is formed by the trabecular processes extending from the inner margin of the septa and fusing with similar processes from other septa to form a perforated central structure. Genus Coscinaraea Milne Edwards & Haime, 1848 (Figs 41–42) TYPE SPECIES: Madrepora monile Forskål, 1775: 133, Holotype examined (Fig. 41). REVISED DIAGNOSIS: Corallum colonial, attached, encrusting, massive or submassive. Corallites cerioid, forming monocentric to polycentric series (Fig. 42), wall synapticulothecal, perforate (Benzoni et al., 2007). Septa perforate, joined by synapticulae, fusing towards the fossa (insets in Figs 41–42). Septal margin ornamentation composed of paddle-shaped granules perpendicular to the septal plane (Benzoni et al., 2007). Septa sides granular. Columella developed, formed by multiple processes. Costae on the colony wall unequal to sub-equal. DISTRIBUTION: Red Sea, Indian Ocean and western Pacific Ocean. REMARKS: Despite the recent taxonomic revision of C. wellsi, now belonging to the fungiid genus Cycloseris Systematics of Craterastrea and description of the Coscinaraeidae Fam. nov. 427 DISTRIBUTION: Western and southern Indian Ocean (Madagascar; Mayotte) (Obura, 2012a). REMARKS: The genus is monotypic. Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 Genus Anomastraea von Marenzeller, 1901 (Figs 45–46) TYPE SPECIES: Anomastraea irregularis Marenzeller, 1901: 124–125, Figs 3, 3a. REVISED DIAGNOSIS: Corallum colonial, attached, encrusting to massive (Fig. 45). Corallites cerioid, polygonal in outline (Fig. 46), predominantly monocentric, seldom bi- or tricentric, wall synapticulothecal, perforate (Benzoni et al., 2007). Septa partly perforate, joined by one row of synapticulae, fusing towards the fossa (inset in Fig. 46). Septa ornamentation composed of paddle-shaped granules perpendicular to the septal plane (Benzoni et al., 2007). Septa sides granular. Columella developed, formed by multiple processes. DISTRIBUTION: Red Sea and Indian Ocean. REMARKS: The genus is monotypic. Genus Craterastrea Head, 1983 Figs 41–46. Macromorphological features of the genera ascribed to the Coscinaraeidae fam. nov. other than Craterastrea: 41, Holotype of Coscinaraea monile (a sub-fossil hence the darker colour), inset shows detail of a corallite; 42, specimen UNIMIB K122 (Fig. 3; Table 1) from Kuwait, inset shows detail of a corallite; 43, Horastrea indica, side view of specimen UNIMIB–TO MY228 from Mayotte; 44, top view of specimen UNIMIB–TO MY229 from Mayotte, inset shows detail of a corallite; 45, Anomastraea irregularis specimen BMNH 1961.7.17.69 from South Africa; 46, one of the specimens included in the molecular analyses in this study UNIMIB K131 (Fig. 3; Table 1) from Kuwait, inset shows detail of a corallite. Scale bars represent 1 cm. (Benzoni et al., 2007, 2012), the genus is most likely still polyphyletic (see Fig. 40 and the Discussion). Genus Horastrea Pichon, 1971 (Figs 43–44) TYPE SPECIES: Horastrea indica Pichon, 1971: 165–171, Figs 1–6, Holotype examined. REVISED DIAGNOSIS: Corallum colonial, attached, massive (Fig. 43). Corallites plocoid, circular or irregular in outline (Fig. 43), forming monocentric to polycentric series (Pichon, 1971), wall septothecal (Benzoni et al., 2007). Septa perforated along the inner margin, otherwise mostly compact, joined by 2–3 rows of synapticulae, fusing towards the fossa (inset in Fig. 44). Septa ornamentation composed of paddle-shaped granules (Benzoni et al., 2007). Columella developed, formed by multiple processes perpendicular to the septal plane. Costae continuous between adjacent calices, unequal to sub-equal. TYPE SPECIES. Craterastrea levis Head, 1983: 428–432, Figs 8–14, Holotype examined. REVISED DIAGNOSIS: Corallum colonial, attached, forming cup shaped colonies. Corallites plocoid, few in number and distant, wall synapticulothecal, perforate. Septa perforate, joined by synapticulae, fusing towards the fossa. Septa ornamentation composed of paddle-shaped granules. Columella developed, formed by multiple processes. Costae on the colony wall unequal to sub-equal. DISTRIBUTION: Red Sea and Indian Ocean (see above). REMARKS: The genus is monotypic. Discussion Since the beginning of the so-called molecular revolution in scleractinian coral taxonomy and systematics (Stolarski & Roniewicz, 2001) the inconsistency of orders, the polyphyly of families and genera, the existence of cryptic taxa, of hybridization and of new species have been highlighted (Romano & Palumbi, 1996; Fukami et al., 2004, 2008; Combosch et al., 2008; Pinzon & LaJeunesse, 2010; Souter, 2010; Kitahara et al., 2010; Benzoni et al., 2011; Huang et al., 2011; Stefani et al., 2011; Lin et al., 2012; Pichon et al., 2012). New micromorphological and microstructural characters proved to be more phylogenetically informative than those traditionally used in hard coral taxonomy (Benzoni et al., 2007; Budd & Stolarski, 2009, 2011; Janiszewska et al., 2011; Stolarski et al., 2011). In this paper, the combined molecular and morphological approach was used for the first time to re-discover and resurrect a Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 428 F. Benzoni et al. Fig. 47. Schematic timeline of the classification of the genera in the Coscinaraeidae Fam. nov., since the description of the family Siderastreidae by Vaughan & Wells (1943) and in the principal studies including them in molecular analyses until the present study. The genera related to the Coscinaraeidae and their changes in classification or in the same molecularly defined clade have been included. The genera included in the Coscinaraeidae in the present study are in bold. For each study we indicated on which kind of data the classification was done (macromorphological, micromorphological and microstructural, molecular). Synonymies and placements at subgenus level are indicated. genus erroneously synonymized with one distantly related to it. The first step allowing the re-examination of Craterastrea and its resurrection as well as the description of the family Coscinaraeidae was the study of collections in natural history museums. Recovery of a long-forgotten taxon in historical collections Due to its distribution in the deeper parts of the reefs or in turbid waters, and likely because of the synonymy with the strikingly similar Leptoseris foliosa (Veron, 1993), Craterastrea levis has remained largely unstudied and unsearched for. However, as shown in this study, the species was occasionally collected in different parts of the Indian Ocean and deposited in various museums before its formal description (Head, 1983) and after its synonymization. Specimens from the Seychelles, Mayotte Island and Madagascar were invariably identified as one or another species of Leptoseris (L. foliosa, L. hawaiiensis, L. cf incrustans) with the notable exception of one specimen from Chagos identified as Coscinaraea sp. and one from Israel actually identified as C. levis by J.W. Wells (http://collections.nmnh.si.edu/search/iz/). Interestingly, this specimen was collected in 1972, 15 years be- fore Edwards & Head (1987) reported that Craterastrea does ‘not penetrate into the Gulf of Aqaba’. Although C. levis has never been recorded in the Maldives, the latest checklists (Pichon & Benzoni, 2007; Bigot & Amir, 2012) only included dives to a maximum depth of 30 m and the taxon might have been overlooked, hence its presence in the archipelago at greater depths cannot be excluded. The re-discovery and study of museum specimens not only allowed extending the known geographic distribution of C. levis but also directed us, through the notes of their collectors, towards more targeted sampling in Mayotte (Fig. 2). Recently, Hoeksema et al. (2011) have highlighted how historical collections can have unforeseen importance as baselines to determine biotic change of coral reefs. However, it should also be remembered that collections still have much information to provide also as repositories of known and unknown biological diversity (see also Benzoni et al., 2010). The in situ, skeleton and molecular results obtained in this study allowed a thorough comparison of C. levis and L. foliosa and led to the formal resurrection of the genus Craterastrea and to the description of a new family to accommodate this genus and its close allies among the Robust corals rather than in the Siderastreidae among the Complex ones. The different aspects of these findings and taxonomic decisions are discussed hereafter. Systematics of Craterastrea and description of the Coscinaraeidae Fam. nov. Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 Craterastrea levis and Leptoseris foliosa: morphological convergence of two distantly related taxa The phylogenetic reconstruction of the relationship between the two taxa based on two different markers (rDNA and COI) revealed once and for all that C. levis and L. foliosa are two valid evolutionary and taxonomic entities. Leptoseris foliosa is monophyletic with the agariciid taxa examined in this study in the Complex clade. Craterastrea is closely related to Coscinaraea, Horastrea and Anomastraea, and all these taxa are related to the Psammocoridae and the Fungiidae in the Robust clade. This being said, the morphological similarity between these taxa at first glance is striking and it has certainly played a major role in the taxonomic confusion between the two. However, a closer inspection of a representative number of specimens in this study has also revealed consistent differences, which tend to become more obvious going from the observation of the macroand micromorphology to the microstructure. In fact, the two species are markedly different in microscopic skeletal features: the structure of the columella (made of one process in L. foliosa and multiple papillary processes in C. levis), the thickness of septa, the granulation of the paddles which are observed on the septal margin, the arrangement of the septal side granulation, and the septa and septocostae perforation. It is at the micromorphological and microstructural level that the two species are most differentiated. The most striking microstructural difference between these species is a pattern of distribution of centres of rapid accretion on septal faces. In Leptoseris foliosa clusters of these centres form elongated aggregations which produce more or less continuous lists (menianae) parallel to the septum. This feature is typical of all agariciids which form a well-defined clade within the Complex clade corals (see also Kitahara et al., 2010, in press). Conversely, in Craterastrea levis centres of rapid accretion form aggregations perpendicular to the septum, their further growth resulting in the formation of paddle-like structures. This feature is common among representatives of the Robust clade (Cuif et al., 2003; Budd & Stolarski, 2011). Ecology of Craterastrea levis Despite the evolutionary divergence of Craterastrea from Leptoseris, the two genera tend to inhabit similar poorly lit environments (deep or turbid). Both species can be typically found in relatively shallow waters in protected lagoon embayments characterized by a high sedimentation of terrigenous input (for Leptoseris foliosa see Dinesen, 1980). Craterastrea levis is also found in clear waters but it occurs much deeper, such as in the Chagos archipelago where it can be abundant below 70 m (Sheppard & Sheppard, 1991). No data are available on the distribution of L. foliosa in the outer barrier, however, Dinesen (1980) reports a specimen 429 collected in more exposed conditions from a cave at 20 m. Besides the agariciid fashion of the corallum growth form, in vivo observations of C. levis in this study confirmed what was already observed by Sheppard & Sheppard (1991) on this species’ extreme reduction of the proportion of colony surface ‘occupied by the plankton trapping polyps and a maximization of the proportion given the photosynthetic coenosarc’. Indeed, it could be that the peculiar morphology of the polyps and their adaptations to nutrition needs in deep waters in some Leptoseris species (Fricke & Schuhmacher, 1983; Fricke et al., 1987; Schlichter, 1991; Schlichter & Fricke, 1991) is similar in Craterastrea. Solving an old riddle and setting the taxonomic record straight Figure 47 summarizes the taxonomic riddle represented by the Siderastreidae from the formal family description by Vaughan & Wells (1943) until this study. The authors based their taxonomic decisions on skeleton morphology, included the following genera in the Siderastreidae: Coscinaraea, Anomastraea (with subgenus Pseudosiderastrea), Maeandroseris ( = Psammocora see Benzoni et al., 2010), and the type genus Siderastrea. Although Wells (1956) overall largely agreed with such classification, he moved the genus Oulastrea from the Agariciidae to the Faviidae. More important taxonomic changes were operated by Chevalier & Beauvais (1987) who considered Pseudosiderastrea a junior synonym of Siderastrea and accepted the inclusion of Horastrea described in the meanwhile by Pichon (1971). They moved Oulastrea into the Siderastreidae, and described the family Psammocoridae including the genus Psammocora and other related genera later synonymized with it (Benzoni et al., 2007, 2010). Chevalier & Beauvais (1987) did not include Craterastrea in their treatment. Later Veron (2000) restored Pseudosiderastrea as a valid genus in the Siderastreidae, moved Psammocora to the Siderastreidae, Oulastrea back into the Faviidae, and kept Craterastrea as a junior synonym of Leptoseris following his former decision (Veron, 1993). In 1996, Romano & Palumbi published a molecular phylogenetic analysis of 16S rDNA, including Psammocora and Coscinaraea, and reported for the first time the two major clades of the Scleractinia, the Complex and the Robust. Fukami et al. (2008) used mitochondrial trees (COI and CytB) to show that the family Siderastreidae is split between the Complex (Siderastrea in clade IX) and the Robust clade (Psammocora, Coscinaraea in clade XI which also included Oulastrea). Benzoni et al. (2007) included for the first time micromorphological, microstructure and molecular data from all taxa included in the Siderastreidae sensu Veron (2000), except Craterastrea. They showed that while Siderastrea and Pseudosiderastrea are Complex clade taxa, Coscinaraea, Horastrea, Anomastraea and Psammocora Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 430 F. Benzoni et al. are all Robust clade taxa. The latter genus has peculiar characters which justified its inclusion in the resurrected family Psammocoridae (Benzoni et al., 2007). In the present study macro- and micromorphology, microstructure and molecular data demonstrated that Craterastrea is closely related to Coscinaraea and its allies currently ascribed to the Siderastreidae and belonging to the Robust clade. Moreover, the genus is distantly related to Leptoseris and the Agariciidae in the Complex clade. Since the type genus of the family and the type species of this genus are found in the Complex clade, while the genera Coscinaraea, Horastrea, Anomastraea and Craterastrea belong to the Robust corals, a new family is described to separate them. Although we did not include Pseudosiderastrea in our analyses, the recent work by Pichon et al. (2012) shows the close relationship of this taxon with Siderastrea based on the partial mitochondrial cytochrome (Cyt) b gene and confirms its placement by Benzoni et al. (2007) in the Siderastreidae in the Complex clade. Although Oulastrea belongs to the Robust corals, it is only distantly related to the Coscinaraeidae (Fukami et al., 2008) and was not included in the new family. Regardless of the aforementioned and described variability in colony and corallite shape and size, the family Coscinaraeidae is characterized by diagnostic characters concerning septa (i.e. pattern of fusion, paddle-shaped ornamentation and microstructures), which are consistent throughout the genera and species ascribed to the family. The Coscinaraeidae are evolutionarily closely related to the Psammocoridae. Despite similar structure of the corallite wall and septa ornamentation, the two are considered distinct on the basis of the presence of series of enclosed petaloid septa (EPS) corresponding to extrapolypal tentacles in vivo in the Psammocoridae, a unique feature among scleractinian corals (Benzoni et al., 2007, 2010). The inclusion of the one sequence of Coscinaraea columna examined by Benzoni et al. (2010) in the Psammocoridae clade suggests that the genus is still polyphyletic even after the re-assignment of Coscinaraea wellsi Veron & Pichon (1980) to the genus Cycloseris (Benzoni et al., 2012). Interestingly, three of the four genera included in the Coscinaraeidae, namely Craterastrea, Horastrea and Anomastraea, are monotypic and are found exclusively in the Indian Ocean, while Coscinaraea extends its distribution into the Pacific (Sheppard et al., 1992; Veron, 2000). This distinctive distribution seems to support the ongoing discussion on the evolutionary distinctiveness of Indian Ocean coral taxa (Stefani et al., 2011; Arrigoni et al., 2012) and of the existence of an Indian Ocean centre of diversity (Obura, 2012b). In this study we resurrected the genus Craterastrea and presented new information on C. levis geographic distribution and the species ecology. The species’ cryptic habit and its preference for shallow lagoon habitats or for the mesophotic zone imply challenges for its conservation. This information should be included in the major online biodi- versity databases as well as formally considered by the international regulations on the trade of endangered species. For example, in the list of CITES corals occurring in Australian waters (ABRS, 2011) C. levis is listed under ‘Other names – Do not use’ for Leptoseris foliosa. This being said, the actual presence of C. levis outside the Indian Ocean still has to be investigated. Also, its inclusion in the IUCN Red List of Threatened species list is necessary. For the first time, the morpho-molecular approach to the study of scleractinian coral integrated systematics has led to the resurrection of a valid genus and species erroneously synonymized with a distantly related genus. The description of the new family Coscinaraeidae is a further step in the challenging but ongoing process of the revision of the taxonomy of scleractinian corals based on the molecular systematics revolution. Acknowledgements The authors are grateful to B.W. Hoeksema (Naturalis), C.R.C. Sheppard (University of Warwick), and an anonymous reviewer for useful suggestions, which helped improve the manuscript. We are indebted to D. Obura (CORDIO) for his help in English editing. Sampling in Mayotte was possible thanks to the Tara Oceans scientific expedition and the OCEANS Consortium. We are grateful in particular to E. Karsenti (EMBL) and E. Bougois (Tara Expeditions) for allowing reef research during the expedition, to S. Kandels-Lewis (EMBL), R. Troublé (Fonds Tara), R. Friederich (World Courier) and to Captain H. Bourmaud and the Tara crew in general and to M. Oriot and J.J. Kerdraon in particular. We are especially indebted to L. Bigot (ECOMAR) for his assistance and support for fieldwork in Mayotte. Sampling in New Caledonia was possible thanks to the support of the Institut de Recherche pour le Développement and to C. Payri, J. Butscher, A. Arnaud and E. Folcher. We are grateful to the Province Sud of New Caledonia for sampling permits in the Prony Bay, and to the Direction de l’Agriculture et de la Forêt (DAF) and to A. Gigou and D. Laybourne for assistance with collection and CITES permits in Mayotte. We thank A. Andouche (MNHN), A. Cabrinovic (BMNH), S. Cairns (USNM), B. Done (MTQ), B.W. Hoeksema (RMNH), K. Johnson (BMNH), M. Lowe (BMNH) and C. Wallace (MTQ) for access to museum collections, and O.S. Tendal (ZMUC) for the loan of type material by Forskål. The first author wishes to thank C. Sheppard for his comments and for validating the identification of the collected specimens. M. Pichon, B. Thomassin and G. Faure are acknowledged for useful comments in the first phase of the morphological analyses and for indications on sampling localities in Mayotte. We are grateful to UNIMIB Lab 2014 and to Diego, Daniela and Andrea in particular for allowing use of the Nanodrop 1000 spectrophotometer, and to E. Reynaud (Adéquation & Systematics of Craterastrea and description of the Coscinaraeidae Fam. nov. Développement) for kindly donating part of the UNIMIB laboratory instruments for this study. Downloaded by [Universita' Milano Bicocca] at 23:45 22 May 2013 References ARRIGONI, R., STEFANI, F., PICHON, M., GALLI, P. & BENZONI, F. 2012. Molecular phylogeny of the Robust clade (Faviidae, Mussidae, Merulinidae and Pectiniidae): an Indian Ocean perspective. Molecular Phylogenetics and Evolution 65, 183–193. AUSTRALIAN BIOLOGICAL RESOURCES STUDY (ABRS) 2011. List of CITES Corals Occurring in Australian Waters. 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