S2 Table. Ka/Ks calculation. Values of Ka/Ks for the Sox9 domains, including the p-value
and model of evolution.
Tests Sp1
Sp2
DIM
HMG
K2
PQS
Danio rerio
Danio rerio
Danio rerio
Danio rerio
Homo sapiens
Homo sapiens
Homo sapiens
Homo sapiens
DIM
HMG
K2
PQS
Homo sapiens
Homo sapiens
Homo sapiens
Homo sapiens
Monopterus albus
Monopterus albus
Monopterus albus
Monopterus albus
DIM
HMG
K2
PQS
Danio rerio
Danio rerio
Danio rerio
Danio rerio
Monopterus albus
Monopterus albus
Monopterus albus
Monopterus albus
Ka/Ks
P-Value(Fisher)
Sox9 and Sox9a
0.0113724 0
0.00180382 0
0.0433189 1.41E-35
0.0213095 0
Sox9 and Sox9b
0.016088
0
0.00197404 0
0.0687748 0
0.0161906 0
Sox9a and Sox9b
0.011934
6.48E-40
0.001
6.13E-27
0.0467966 0
0.0162497 0
Result
Model
purifying selection
purifying selection
purifying selection
purifying selection
F81
F81
HKY
TN
purifying selection
purifying selection
purifying selection
purifying selection
F81
F81
TVM
TN
purifying selection
purifying selection
purifying selection
purifying selection
F81
HKY
TVM
TIM