4 II. REVIEW OF LITERATURE Estuaries are considered as nutrient sinks or traps, where nutrient dynamics are unpredictable and significant, as it make estuary a highly productive ecosystem (Odum, 1971). Among the various brackish water systems, the Hoogly-Matlah estuarine complex in West Bengal, Chilka lake in Orissa, Pulicate lake and Vellar estuary in Tamil Nadu along the east coast, the Vembanad lake and its connected backwaters of Kerala, GurpurNethravati and Mulki-Pavanje, Haladi-Chakra, and Kali estuary in Karnataka and Mandovi-Zuari estuarine complex of Goa along the west coast of India are prominent. Estuaries of east and west coasts of India differ to a large extent from each other by the geographic condition, monsoonal regime, the river water influx and tidal range. 2.1 Hydrography- temperature, pH, salinity, dissolved oxygen and nutrients Seasonal variations in the ecological parameters are studied in estuaries along the west coast of India. Seasonal variations in hydrographic parameters in Kali estuary (Karnataka) were studied by Harkantra, (1975a) and Bhat and Neelakantan (1988). Detailed studies of hydrographic parameters were conducted in Mandovi-Zuari estuary in Goa (Alagarswamy, 1991; Parulekar et al. 1973; Qasim 1979; Qasim and Sengupta, 1981). Major work in this aspects carried out in Kerala were that of Qasim and Gopinath (1959), Josanto (1971) in Cochin back waters and in Ashtamudi estuary by Nair et al. (1983) and Nair et al. (1984). Along Malabar coast seasonal ecological variations were studied in Korapuzha Estuary (George and Kartha, 1963) and Beypore Estuary (Premchand et al. 1987). 5 Kennedy (1990) reported that tidal estuary undergoes dynamic interaction of salt and freshwater, which is largely influenced by tidal exchange and land drainage among several factors. Hydrographic features such as temperature, salinity, dissolved oxygen and nutrients govern the distribution of flora and fauna in estuaries (Gouda and Panigrahy, 1995). Thus, the studies on estuaries are more important as these are highly productive and play an important role as nursery grounds for many commercially important fishes, and shrimps (Devi et al. 1981). The hydrography of the Mandovi and Zuari estuarine systems have been studied by many scientists during different seasons (Dehadrai, 1970; Das et al.1972; Sankaranarayanan and Jayaraman, 1972; Dwivedi et al.1973; Singbal, 1973 and 1976; Antony et al.1974; Dwivedi et al.1974; Goswami and Singbal, 1974; Thomas Cherian et al.1975; Varma et al.1975; De Souza, 1977 and 1999; Qasim and Sengupta, 1981; George et al.1984; De Souza and Sengupta, 1988 and Nayak and Chandramohan, 1989). The estuarine hydrography of Cochin backwaters were studied by many scientists (Anirudhan et al.1987; Devi et al.1981; Lakshmanan et al.1982; Manikoth Salih,1974; Menon et al.2000;.Ramamirtham et al.1986; Pillai, 1993; Shynamma and Balakrishnan, 1973). The estuaries in Karnataka viz., Nethravati-Gurpur estuary, Mulki-Pavanje estuary, Sita-Swarna estuary and Haladi-Chakra estuary have gained greater importance because of their high productivity and potentialities. Menon et al. (1977) opined that the NetravatiGurpur estuary experienced a horohelinicum condition during early part of monsoon season. A detailed investigation on the hydrography of Nethravati-Gurpur estuary had been carried out by Bhat (1979). Sahu (1981) studied the seasonal variations of hydrographic parameters while working on the circulation in the Nethravati-Gurpur estuary. Reddy (1982) observed seasonal and spatial variations of selected hydrographical parameters of 6 the Mulki estuary, Dakshina Kannada. Nagarajaiah and Gupta (1983) documented seasonal fluctuation of hydrographic parameters of brackish water ponds of Nethravati estuary. Patil (1987) and Suresh (1987) have discussed seasonal and spatial variations of hydrographical parameters of Nethravati-Gurpur estuary. Vedamurthy (1992) documented the distribution of particulate matter in the Nethravati-Gurpur estuary. Shanthanagouda (2001) documented spatial and seasonal variations of hydrographic parameters of Nethravati-Gurpur estuary. Tripathi (2002) while working on the distribution of phytoplankton observed selected hydrographic parameters of Nethravati-Gurpur estuary. Vijaykumar et al. (2004), while describing the distribution of crustacean larvae in Nethravati-Gurpur estuary documented selected hydrographical parameters. Shivakumar (2005) studied the variations of selected hydrographical parameters of Mulki-Pavanje estuarine complex, Dakshina Kannada. Woods (2006) studied the hydrography, suspended sediments, chlorophyll a, chromophoric dissolved organic matter and optical characteristics of the Pearl River (Zhujiang) estuary. The study indicated that spatial patterns of modelled photo synthetically available radiation (PAR) during July suggested light limitation of primary production in low salinity turbid western waters due to high light attenuation. Capo et al. (2006) studied the morphology, hydrography and sediment dynamics in a mangroove estuary, the Konkoure Estuary, Guinea. The study indicated that the estuary became stratified during high river flows and spring tides whereas a salt wedge appears during neap tides. The suspended matter is transported by the tidal effect within the middle estuary and is therefore trapped in the turbidity maximum zone (TMZ). The location of the TMZ is river-controlled and is correlated with residual currents but not with salinity front. Buzzelli et al. (2007) studied the hydrographic characterization of two tidal creeks 7 with implications for watershed land use, flushing times, and benthic production and they revealed that the dissolved oxygen and salinity contributed to an estimated 8-10 times more phytoplankton-based carbon. 2.2 Sediments – texture and organic matter. Estuaries are regions of fundamental importance with respect to chemical processes occurring on the global scale, for they represent major route whereby lithospheric material is transported to the oceanic mentary domain (Morris, 1978). The studies of marine processes have paved the way for predicting the geochemical behaviour of each individual element. Comprehensive studies on the physico-chemical, biological and ecological aspects have been made in the sediments of different Indian estuaries. Along the west coast the important contributions were made by Alagarsamy (1991) and Nasnolkar et al. (1996) in the Mandovi estuary; Sankaranarayanan and Panampunnayil (1979), Nair et al. (1993) and Seralathan et al. (1993) in the Cochin backwaters; Reghunadh et al. (1995) in the Tellicherry mangrove sediments; Nandan and Abdul Azis (1996) in the Kadinamkulam estuary; Prabhu et al. (1997) in the near shore sediments off Honnavar; and Anilkumar et al. (1999) in the Baypore estuary. Rao (1971) studied the sedimentological characteristics of the bottom sediments of Pulicat Lake. Chemical and textural characteristics of sediments in the upper reaches of Cauvery estuary were discussed by Ramanathan et al (1988). Tropical estuaries are highly dynamic owing to variation in the tidal forces, energy of rivers at the confluence, which varies measurably, and interplay of these forces result in a complicated sedimentary environment. In addition to these, the source of hydrodynamic conditions of the transport media all mineral composition, influence the variation in texture 8 of the sediment. The morphological features play an important role in sediment distribution. The urbanization and anthropogenic processes are influencing sedimentation pattern and hence siltation is found to be one of the common problems in tropical estuaries. For efficient management of estuaries, knowledge of sedimentation and textural variation is of vital importance. The sediment acts as the reservoir of nutrient replenishment of these nutrients in times of need and their consequent renewal greatly helps in the biological cycle of the system. Such an exchange of nutrients depends upon the characteristics of the sediment and hydrographic features of the estuary. The distribution and abundance of benthic organisms are primarily influenced by the sediment texture characteristics. Sanders(1969) and Wharfe (1976, 1977) have done the pioneering works to establish the interrelationship between the benthos and textural characteristics of sediment in the Buzzards Bay and the lower Medway estuary, Kent, United Kingdom respectively. Along the east coast of India, Venkatarathnam (1968) studied the sediments of Vishakapatnam, Pudimadaka continental shelf and Pulicat Lake-Pennar river complex. Sasmal et al. (1986) documented the texture and composition of sediment of Hoogly estuary and near shore environment. Studies on texture, mineralogy, carbon, nitrogen and phosphorus(CNP) of the sediments of Vishakapatnam shelf were carried out by Satyanarayana et al. (1993). Jayaraju et al. (1998) worked on the sediment texture, organic matter and salinity while studying on the benthic foraminifera of Pulicat Lake. Mohan (2000) analysed the sediment texture in Vellar estuary and concluded that the variation in textural characteristics was attributed to tidal activity. Islam et al. (2004) while studying water quality, nutrient dynamics in shrimp farms of the Sundarbans mangrove forest, Bangladesh, documented sediment profile of the farms. 9 Along the west coast of India many scientists have investigated textural characteristics of the sediment of Cochin backwaters and adjoining coastal waters. Dora et al. (1968) documented the textural characteristics of the sediment of Narrakkal mud banks. Josanto (1971) documented the size distribution of the sediment in Cochin backwaters. Jacob and Qasim (1974) examined the organic carbon, size fraction, and calorific values of sediment from the mud banks of Kerala. Sankaranarayanan, and Panampunnayil, (1979) studied the organic carbon, nitrogen and phosphorus in the sediment of Cochin backwaters. In the same area, Paropakari (1979) examined organic carbon, nitrogen ratio and nature of sediments in relation to pollution. Varshney et al. (1981) recorded the physico-chemical characters of the sediment and overlying water of Narmada estuary. Ramachandra (1981) reported that sand contributes to 80 % of the sediment composition in Mulki estuary.. Sediments of Cochin estuary were studied in relation to changing hydrographic conditions by Nair et al. (1993). Sediment characteristics in the estuarine mouth along the Ernakulam and Mattancherry channel were studied by Seralathan et al. (1993). Prabhu et al.(1993) carried out studies on the organic carbon and composition of the near shore sediment off Gangolli. Nandan and Abdul Azis (1996) documented the organic matter of sediments from the retting and non-retting areas of Kadinamkulam estuary. Physical properties of sediment in the mud bank area of Cochin were studied by Kumar et al. (1998). Badarudeen et al. (1998) observed the average sand percentage of 68 % while studying the sediment grain size in Kunnur region, Karnataka. Devi et al. (1999) recorded five types of substratum along the southwest coast clayey silt, clayey sand, silty clay, sandy silt and sand), but in southeast coast, sand percentage was predominant. Shanthanagouda (2001) studied textural characteristics and organic carbon of the sediment in Nethravati- Gurpur estuary. Rajesh et al.(2002) documented the sediment composition, organic carbon and 10 total phosphorus and total nitrogen in relation to shrimp farming. Ingole et al. (2002) observed that the sediment comprises of mainly silt and clay with less of sand in Dobhol waters. Rajesh et al. (2004) carried out the work on organic carbon, nitrogen, phosphorus, and textural analysis of the sediment in brackishwater impoundments along Nethravati estuary, Mangalore. Algarasamy (1991) reported the organic carbon in the sediment of Mandovi estuary Goa, which ranged from 0.1 to 3.0 %. Nasnolkar et al. (1996) have carried out a study on organic carbon, nitrogen and phosphorus in the sediments of Mandovi estuary, Goa. Varsheny et al. (1999) observed the clayey silt sediment with higher percentage of organic matter in Thana creek, Mumbai. An investigation on sedimentation of particulate matter in the Dona Paula Bay, west coast of India was carried out by Bhaskar et al. (2000). Kumary et al. (2001) studied the sediment characteristics of Poonthura estuary and recorded high organic carbon content of 2.4 to 83.3 mg/g. Ingole et al. (2002) observed the high mean value of (1.42 %) organic carbon content in sediments of Dabhol. Ayyankumar(2007) while working on the organic content in the sediments of Gurpur estuary reported that the sediments ranged between 0.35 (June) and 3.68% (May). 2.3 Macrobenthos - Distribution and Abundance A detailed knowledge of the bottom fauna is essential for the determination of the fishery potential of an estuary. The structure of the shallow water benthic fauna and their role as the principal food source for the demersal fishes and other predators, and as the processors of organic productivity of the superficial waters through nutrient regeneration are well documented by many authors (Rainer, 1982; Miron and Desrosiers, 1990; Soemodinoto et al.1995; Platell and Potter, 1996.) 11 Chakraborty and Choudhury (1997) have recorded the maximum species richness of polychaetes during the monsoon season and the minimum during the pre-monsoon season in Hoogly estuary, and further the authors have attempted to correlate polychaete species with hydrographical parameters like salinity, temperature, dissolved oxygen etc. Distribution of macrobenthos in three different zones of Vellar estuary was carried out by Chandran et al. (1982). Murugan and Ayyakkannu (1991), while investigating on the ecology of benthic macrofauna in Cuddlore-Uppanar backwaters recorded greater abundance of polychaetes followed by molluscs, crustaceans and others. While studying the occurrence and abundance of benthic fauna in marine zone of Coleroon estuary, Jagadeesan and Ayyakkannu (1992) observed the dominance of polychaetes followed by crustaceans in a marine zone of Coleroon estuary. Devi et al. (1999) observed the low population density of macrobenthos in south-east coast compared to south-west coast and found dominance of polychaetes along south-west coast and the dominance of molluscs along south-east coast. Kathiresan (2000) reviewed the works carried out on the plankton, nekton, benthos and flora of Pichavaram mangrooves. Kumar and Sivakumar (2001) investigated the influence of estuarine environment on benthic foraminifera in Uppanar river estuary. Kailasam and Sivakami (2004) investigated the effect of thermal effluent on benthic fauna of Tuticorin bay. Along the west coast of India investigations on benthos in Cochin back waters and other estuarine complexes from Kerala, Netravathi-Gurpur, Mulki-Pavanje, Udyavar and Kollur estuaries from Dakshina Kannada, Mondovi-Zuari from Goa, Narmada-Tapti from Gujrat are of great importance. Kurian (1972) observed the hydrographical features playing an important role in sedimentation and distribution of fauna in Cochin backwaters. The influence of salinity on macrobenthos was clearly described by Ansari (1974) while 12 working on the macrobenthic production in Vembanad lake. Kurian et al. (1975) observed the bottom fauna of the Vembanad lake, which chiefly composed of molluscs, polychaetes and amphipods and they documented the variation of fauna in relation to sediment characters and salinity. Nair et al. (1984) while working on ecology of Indian estuaries observed quantitative distribution of benthic fauna in relation to salinity, dissolved oxygen, and nature of sediment. Sunilkumar (1995) documented biomass, horizontal zonation and vertical stratification of polychaete fauna in the littoral sediments of Cochin estuarine mangrove habitat. In the soils of Cochin backwaters, Sunilkumar (2002) studied the distribution and dominance of macroinvertebrates in shrimp culture farms. Harkantra (1975a) carried out a detailed study on the seasonal distribution in the benthic production of Kali estuary (Uttara Kannada). The author also reported higher benthic production during pre-monsoon and post-monsoon seasons and further observed the dominance of bivalves followed by polychaetes. The spatial and seasonal distribution of macrobenthos of Netravati- Gurpur estuary was documented by Bhat and Gupta (1980). The authors have observed greater dominance of molluscs followed by polychaetes and crustaceans. Ramachandra (1981) made a detailed study on the macrobenthos of Mulki estuary, Dakshina Kannada. His study revealed details of macrobenthos in Mulki estuary. An investigation on macrobenthos with sediment characteristics of Mulki estuary was carried out by Ramachandra et al. (1984). Bhat and Neelakantan (1988) investigated on the influence of environment on the distribution of macrobenthos in Kali estuary. Narasimham (1991) reported that the river Mulki supports rich clam fisheries contributing 2392 tonnes/year. Prabhu et al. (1993) while working on macrobenthic fauna at the barmouth of Gangolli river observed the dominance of polychaetes followed by echiuroides and 13 molluscs. Shanthanagouda (2001) documented the species diversity of macrobenthic fauna in Nethravati- Gurupur estuarine complex. The Mondovi-Zuari estuarine system in Goa had received considerable attention. Dwivedi et al. (1974) studied the ecology of macrobenthos in the Mondovi-Zuari and Camburja estuarine complex. Further the authors have revealed that the sandy substratum along with euryhaline condition favoured higher macrobenthic biomass. Parulekar and Dwivedi (1974) investigated the benthic faunal composition of Mondovi estuary in relation to bottom salinity and sediment characteristics. An annual cycle of macrobenthic fauna, their distribution, production and trophic relations was studied in Goan estuaries by Parulekar et al. (1980). The authors further observed dominance of polychaetes and bivalves in the total macrobenthic population. Govindan et al. (1983) investigated benthic biomass and faunal composition in relation to various environmental conditions of four estuaries of south Gujarat. Varshney et al. (1999) recorded the dominance of foraminifera, polychaeta, crustacea and pelecypoda in the macrofaunal composition in Thana creek, Mumbai. Macrobenthic communities of the coastal waters of Dabhol was investigated by Ingole et al. (2002). Harkantra (1982) recorded dominance of polychaetes followed by crustacea, mollusca and echinodermata while studying sub-littoral macrobenthic fauna of the lower Swansea bay, England. Cattrijsse et al. (1992) reported total 46 species of amphipods belonging to family Gammorideans, Caprellids and Hyperiid along with the 8 species of isopods in Voor delta and the Westerschelde estuary. 2.4 Phytoplankton and pigments A great deal of information is available regarding the occurrence and abundance of phytoplankton in space and time. The seasonal and spatial variation of phytoplankton is 14 governed by various physico-chemical factors and these factors were known to exhibit greatest variations in marine environment in general and in estuaries in particular. Many scientists have carried out investigations on the occurrence and distribution of phytoplankton of various estuaries located along East and West coasts of India. Several studies have been carried out on the pigment analysis and their relationship with several other factors in different estuaries of the world. Pioneering work carried on pigment analysis and their relationship with environmental parameters was carried out in Barrents sea by Kreps and Verjbinskaja (1930) and Harvey (1934). A great deal of information is available on the diurnal and seasonal variation of chlorophyll ‘a’ and other plant pigment in the estuarine and inshore marine environment along the Indian coasts. The primary productivity studies were conducted were based on chlorophyll in Godavari river estuary (Rajaylakshmi and Premswarup, 1975). Diversity of phytoplankton species and pigment concentration in Vellar estuary was investigated by Vijayalakshmi and Venugopalan (1975). Diurnal variation in the chlorophyll-‘a’ concentration was reported by Subramanian and Venugopalan (1980) in Vellar eatuary with no significant difference in Chlorophyll ‘a’ between surface and bottom water. Seasonal distribution of phytoplankton pigment in the Vellar estuary was studied by Joseph (1982). Their studies revealed a direct relationship between salinity and chlorophyll fractions. An investigation of phytoplankton pigment in relation to primary production and nutrients in inshore water of Tuticorin was carried by Gopinathan et al. (1994). Seasonal variations of certain plant pigment in the coastal waters off Mangalore was investigated by Manjappa (1987). The distribution of plant pigment in relation to hydrography of Nethravati-Gurupur estuary was documented by Suresh (1987). Gowda et 15 al. (1997) studied the distribution of chlorophyll-a and phaeo-pigments in NethravatiGurupur estuary. Temporal variation of phytoplankton pigment in relation to nutrient in a tropical coastal lagoon was studied by Nayar and Gowda (1999). Gowda et al.(2001b) while investigating on variation of primary production documented the Chlorophyll-a and carotenoids in Netravati estuary, Mangalore. Diurnal variation of phytoplankton pigments in Netravati estuary, Mangalore was studied by Gowda et al. (2001b). An investigation on primary productivity and algal pigments in estuaries of Dakshina Kannada and Udupi districts was carried out by Gupta et al. (2002). Bollens et al. ( 2006) studied plankton dynamics of the lower Columbia River estuary. The results indicated that microplankton groups observed were diatoms, dinoflagellates and ciliates; dominant mesozooplankton taxa included the copepods and also indicated a strong seasonal cycle, with spring blooms of diatoms and copepods, followed by compositional shifts in summer toward flagellates, ciliates and other copepods. With respect to freshwater flow, both biomass and abundance of microplankton were higher high flow than in low flow. The tidal cycle sampling showed large variation in abundance and composition of plankton with tidal stage, especially in diatoms, ciliates and copepods The spatial and temporal variation of phytoplankton pigments in the western part of Ria Formosa, Portugal, was investigated by Perira et al., (2007). The analysis revealed that the diatoms and other algal groups with a similar pigment profile dominated the phytoplankton community throughout the year. Ramdani et al. (2009) studied the environmental influence on the qualitative and quantitative composition of phytoplankton and zooplankton in the North African coastal lagoons. They evaluated the hydrographical and other influences on the structure, composition and space-time development of the plankton communities. 16 2.5 Suspended Particulate Matter (SPM) A great deal of work has been carried out on various aspects of seston. Chalapathirao and Satynarayanarao (1973) made observations on the distribution of particulate organic matter in inshore waters of Bay of Bengal off the coast of Waltair and reported peak values of particulate organic matter during peak phytoplankton growth in summer and also revealed an increase in particulate organic carbon and nitrogen in surface waters during the period of heavy rains. The distribution of suspended particulate matter in the waters of eastern continental margin of India was studied by Madhusudanarao (1985) and reported a decrease in total particulate away from the coast and high concentrations in some river mouths and in near shore regions. The total SPM material in the clambeds in Mulki estuary present study varied from 13.2 to 134. 00 mg/l. In Cochin backwater, Saraladevi (1989) reported the values of total suspended solids between 3 and 253 mg/l Vedamurthy (1992) has reported the values between 7 and 218 mg/l. The values of total suspended solids in Gangolli estuary varied between 10 to 173 mg/l (Reddy et al. 1992).. Padyar (1999), while studying the particulate matter in Mulki - Pavanje estuary reported that the suspended solids varied between 13 to 143 mg/l. The author opined that the higher values in the monsoon and post monsoon due to terrigenous input and lower value during pre monsoon due to lesser inputs. 2.6 Clam habitat – Population ecology The estuarine ecosystem reveals the complexity of the operating forces of both marine and fresh water origin, induced mainly by tidal incursion, current patterns and the magnitude of fresh water discharge at different periods and seasons (Cameron and Pritchard, 1963). The abiotic factors vary from habitat to habitat and are constantly under fluctuations within a habitat. They interact with each other and also influence greatly the 17 biota. The climatic, physical and chemical factors are the three major types of determining factors apart from the topography. Water quality reflects the collective influence of various physic-chemical characters and the influence of meteorological conditions. This would determine the type and growth rate and reproduction of organisms in any locality (Vink, 1983). The various environmental and biological characteristics in a water body have a dynamic equilibrium with one another, while the physical and chemical parameters in themselves, collectively determine the water course favourable for aquatic organisms. The nature and distribution of flora and fauna in an estuary are mainly controlled by fluctuations in the physical and chemical characteristics of the water, such as temperature, transparency, pH, salinity, dissolved oxygen and nutrients (Murugan and Ayyakkannu, 1991). The productivity of the ecosystem differs significantly and the annual productivity indicates the trophic status and it indicates the health of a system. Influence of environmental parameters especially temperature and salinity are studied in relation to the distribution, reproduction and condition of bivalves worldwide. Adaptation of the clam P. laterisulca in Kalbadevi estuary was studied by Mane and Dhamne (1980). Cywiak et al. 1989, reported that abiotic variables such as temperature and salinity caused mortality of bivalves Donax trunculus and Donax semistriatus along the Mediterranean coast. It was also reported that these species were susceptible to environmental stresses. Study on the influence of temperature and salinity on reproduction of Ostrea edulis showed that oyster is an opportunistic organism which concentrates its reproductive efforts during a short period of favourable condition and it is directly dependent on nutritive availability in the environment (Ruiz et al. 1992).The relative importance of biotic versus abiotic factors in determining the spatial distribution of intertidal clams was studied by Schoeman and 18 Richardson (2002) and further they observed that a mixture of biotic and abiotic factors mediates abundance of clams. Marin et al. (2003) have observed that condition index and total energy content of the clam, Tapes phillipinarum, was influenced by environmental factors. The relationships between gametogensis and environmental parameters have also been described in other bivalve groups (Ruiz et al. 1992; Cano et al. 1997; CeballosVazquez et al. 2000 and Luna-Gonzalez et al. 2000). In the populations of Donax denticulatus in Puerto Rico, it was observed that higher population density and bigger clams were found in water having higher concentration of total organic carbon, particulate organic carbon and nitrate-nitrogen. This study indicated the relationships between water, sediment quality and clam density (Sastre, 1984). Maske et al (2004) studied salinity tolerance and related biochemical changes in three clams from Bhatye estuary, Ratnagiri district of Maharashtra. It was observed that K. opima was highly sensitive while M. meretrix was more resistant than M. casta. Ringwood and Kepler (2002) studied the relationship between important water chemistry parameters such as pH, salinity and dissolved oxygen and biotic performance based on clam, Mercenaria mercenaria growth. Studies indicated that the salinity was identified as an important determinant of clam growth over wide salinity ranges (1035ppt), pH was also found to be a very important parameter, especially in low-salinity regimes (< 25ppt). Further his study indicated that when an average pH levels fell below 7.5 or minimum pH levels fell below 7.2, the growth rates were < 50% that of clams deployed under higher pH conditions. Estuarine systems are generally perceived as being well-buffered zone so pH is frequently assumed to be unimportant, but the results suggested that pH levels can decline in estuarine systems to levels that can adversely 19 affect biological responses. Stecher et al. (2003) studied the population characteristics of abundant bivalves (Mollusca, Vesicomyidae) at a sulphide-rich seafloor site near Lihir Island, Papua New Guinea. He found that the average biomass value was 13.3 kg/m2, with maximum values over 29 kg/m2 (wet mass with shells). Whiteley et al. (2007) studied the ecological implications of intertidal mariculture and observed differences in bivalve community structure between farm and reference sites. The authors opined that predation and competition play minor roles in structuring communities in soft-bottomed environments. Mendoza (2007) studied the community structure and nutrition of deep methane-seep macrobenthos from the North Pacific (Aleutian) Margin and the Gulf of Mexico. The studies indicated a characteristic communities or features common to the three deep-water seeps (>3000 m), but common properties across habitats (mat, clam bed, pogonophorans), independent of location or water depth. In general, macrofaunal densities were lower (except at Florida microbial mats), community structure was similar, and reliance on chemosynthesis was greater than observed in shallower seeps off California and Oregon. Flye-Sainte-Marie et al. (2008) studied the effect of sediment grain-size on development of brown ring disease in the Manila clam Ruditapes philippinarum. The results indicated that the presence of large sediment grains in natural habitats, which become lodged in the shell opening will induce the Brown ring disease (BRD). Nizzoli et al. (2007) studied oxygen and ammonium dynamics during a farming cycle of a bivalve Tapes philippinarum. They opined that the oxygen consumption and ammonium production at the high density area were on an average, 3 to 4 and 1.9 to 4.9 folds higher than those measured in the control field respectively; and their growth rates were positively correlated with clam biomass. The clams have the potential to drive benthic metabolism in farmed areas and to sustain macroalgal growth through regeneration 20 of limiting nutrient in seawater. While studying the influence of seed size, level of protection and substratum type on mortality early in the culture period, Onge and Miron (2007) studied on erosion and transport of juvenile softshell clams (Mya arenaria).The results indicated that stream velocity and sediment type interact together on the erosion of clams from the sediment. Juveniles were eroded in great numbers in sand while mud retained them more easily. Field results confirmed the bearing of free-stream velocity, shell length and type of sediment on the erosion rate of clams. The ecology of clambeds in India had been studied by several authors. Some of them are on Anadara granosa by Narasimham et al. (1984); Narasimham, (1985); Meretrix casta by Parulekar et al. (1973); Harkantra, (1975, 1975a); Rao et al. (1980) and Sreenivasan (1983 a, 1983b; Paphia malabarica by Parulekar et al. (1984) and Villorita cyprinoid.s Rao et al.(1989). Reports on the habitat preferences, density, biomass and distribution are available for A. granosa (Radhakrishna and Ganapathi, 1968), Meretrix ovum (Desai, 1971 and Kurian, 1972), Donax cuneatus (Victor and Subramaniam, 1988), Donax sp. (Ansell et al. 1972 a, 1973), M. casta (Balasubramanyan and Natarajan, 1987 and Modassir, 1990). An understanding of the ecology of clam bed is very essential in order to evaluate the influence of different environmental factors and their interactions. This will help in future management of fishing and farming of clams in an area. 2.7 Allometric relationships- morphometric measurements Studying bivalve growth and establishing allometric relationships are essential for generating useful information for managing resources and understanding changing environmental conditions (Palmer, 1990). 21 Different environmental parameters and physiological factors are found to influence shell growth in bivalves (Gasper et al., 2002). Environmental factors latitude, depth, shore level, tidal level, currents water, turbulence, wave exposure type of bottom and sediment are known to influence shell morphology and relative proportions of many bivalve species, ( Beukema and Meehan, 1985; Claxton et al. 1988; Franz, 1993; Dame, 1972 ; Fuiman et al., 1999; Hinch and Bailey, 1988; Akester and Martel, 2000; Newell and Hidu, 1982). In India, allometric relationships of several bivalves have been studied. The important studies were those of Durve and Dharmaraja (1965, 1970), Alagarswami (1966), Parulekar et al., (1973), Alagaraswami and Chellam (1977), Shafee (1978), Ansari et al., (1979), Mohan (1980), Mohan and Damodaran (1981), Sreenivasan (1983), Mohan et al. (1984) and Rao (1988). Studies on Paphia malabarica are limited to the length- weight relationship by Rao (1988) from Mulki Estuary in Dakishna Kannada, and dimensional variations by Appukuttan (1993) from Ashtamudi Estuary in south Kerala. 2.8 Condition index-growth factor Bivalves are known for delicacy at sea food market. Like any commercial food, it is necessary that bivalves should possess good quality standards such as amount of meat and appearance. In bivalves, condition index or fattening index or simply condition, is one of the most satisfactory evaluation methods for estimating the amount of meat related to shell cavity (Nishida, 2006). Variation in meat content is observed in most of the bivalves depending on their physiological condition and also changes in the environmental condition. Condition of bivalves is recognized as the degree of the fatness or the extent to 22 which the meat fills the shell cavity. The body size undergoes changes and such changes are often associated with the breeding cycle. This is accomplished by the development of an increase in size of the reproductive organs followed by a considerable reduction in size after spawning. The meat weight and spawning activity of the bivalves are the two important factors which should be taken into account in any judicious exploitation of the resource. The knowledge of the changes in meat content of the bivalves is therefore important for the culturist, as these greatly affect the meat yield and financial returns (Rajapandian and Rajan, 1987). Reports on the studies on the condition index of the bivalves are available from abroad and India. Schumacker et al. (1996) studied the condition index of oysters to monitor the aquatic environment of Willapa Bay in Washington and has observed that gravimetric and volumetric methods produce linearly correlated indices when performed on the same oysters and that less time consuming and more precise gravimetric method can be used as an accurate gauge of oyster. Control of temperature over the condition index was studied by Fischer et al. (1996), they have observed that temperature controls the condition index but it has not known whether the changes resulted directly from the temperature or from the temperature driven reproductive and metabolic cycles. Food limited growth and condition index were studied by Rheault and Rice (1996) in eastern oyster, Crassostrea virginica. Seasonal changes in condition index in scallop Pecten maximas in relation to environmental condition was studied by Pazos et al. (1997). Okumus and Stirling (1998) studied the meat weight, condition index and biochemical composition of mussels (Mytilus edulis L.) in suspended cultures. From Indian waters, seasonal changes in condition index of bivalves were studied by Venketaraman and Chari (1951), Abraham (1953), Nayar (1955), Durve (1964, 1970), 23 Nagabhushanam and Talikhedkar (1977a, 1977b), Krishnakumari et al. (1977), Mane and Nagabhushanam, (1979), Joseph (1979), Balasubramaniam et al., (1979), Narasimham (1984, 1988), Rajapandian and Rajan (1987), Joseph and Madhystha (1987), Thippeswamy and Joseph (1988) and Rao (1988). The important species include Perna viridis Linnaeus, Villorita cyprinoides (Gray), Katelysia opima (Gmelin), Crassostrea madrasensis (Preston), Meretrix meretrix (Linnaeus), M. casta Chemnitz, Donax fabs Gmelin, D. incarnates Gmelin, D.cuneatus Linnaeus, Placenta placenta (Linnaeus) and Anadara rhombea (Born). In all the studies the condition index was correlated with reproduction and it was observed that high condition index was observed just before the spawning season. Sujitha Thomas (2004 ) indicated that high condition index P.malabarica in Dharmadom estuary was observed in September i.e just before spawning.
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