FEMS Microbiology Ecology 32 (2000) 121^128 www.fems-microbiology.org Mathematical estimations of hyper-ammonia producing ruminal bacteria and evidence for bacterial antagonism that decreases ruminal ammonia production1 Jennifer L. Rychlik a , James B. Russell b b; * a Section of Microbiology, Cornell University, Wing Hall, Ithaca, NY 14853, USA Agricultural Research Service, U.S. Department of Agriculture, Ithaca, NY 14853, USA Received 21 September 1999 ; received in revised form 6 March 2000; accepted 6 March 2000 Abstract Mixed ruminal bacteria (MRB) from cattle fed hay produced ammonia from protein hydrolysate twice as fast as MRB from cattle fed mostly grain, and a mathematical model indicated that cattle fed hay had approximately four-fold more hyper ammonia-producing ruminal bacteria (HAB). HAB had a high maximum velocity of ammonia production (Vmax ) and low substrate affinity (high Km ), but simulations indicated that only large changes in Vmax or Km would cause a large deviation in HAB numbers. Some carbohydrate-fermenting ruminal bacteria produced ammonia at a slow rate (CB-LA), but many of the isolates had almost no activity (CB-NA). The model indicated that the ratio of CB-LA to CB-NA had little impact on HAB numbers. Validations based on predicted ratios of HAB, CB-LA and CB-NA overpredicted the specific activity of ammonia production by MRB, but co-culture incubations indicated that washed MRB from cattle fed grain could inhibit HAB. Because autoclaved MRB had virtually no effect on HAB and the incubations were always carried out at pH 7.0, the inhibition was not simply a chemical effect (e.g. low pH). Published by Elsevier Science B.V. All rights reserved. Keywords : Ruminal bacterium; Ammonia production; Hyper-ammonia producing bacterium; Protein 1. Introduction In ruminant animals, as much as 50% of the dietary protein can be converted to ammonia by microorganisms [1]. Some ammonia is utilized as a bacterial nitrogen source ; however, rates of ammonia production often exceed rates of ammonia utilization [2]. Excess ammonia is absorbed into blood, converted to urea by the liver, and excreted. Because ruminant nitrogen excretion is a process that increases the cost of production and causes groundwater contamination [3], nutritionists have sought ways of decreasing wasteful ruminal ammonia production [4]. Insoluble proteins are not easily degraded by rumen bacteria, but the use of `bypass' or `escape' proteins is * Corresponding author. Tel. : +1 (607) 255-4508; Fax: +1 (607) 255-3904; E-mail: [email protected] 1 Mandatory disclaimer : `Proprietary or brand names are necessary to report factually on available data; however, the USDA neither guarantees nor warrants the standard of the product, and the use of the name by the USDA implies no approval of the product, and exclusion of others that may be suitable.' constrained by the increased cost of these supplements. Ruminal ammonia utilization can be enhanced by adding starch to the ration, but starch can cause ruminal acidosis, acute indigestion and even death of the animal [5]. The ruminal additive, monensin, can decrease ruminal ammonia in vitro and in vivo [6], but recent work indicated that monensin was not able to decrease ruminal ammonia when alfalfa hay was the dominant forage [7]. Some carbohydrate-fermenting bacteria produce ammonia, but these bacteria generally have low speci¢c activities of amino acid deamination and cannot utilize amino acids as a sole energy source for growth [8]. Hyper-ammonia producing ruminal bacteria (HAB), identi¢ed as Peptostreptococcus anaerobius, Clostridium sticklandii, and Clostridium aminophilum [9], generate ammonia at a high rate [10], and recent work by New Zealand researchers indicated that the rumen had additional species of HAB [11]. The following experiments were designed to: (1) compare the ammonia production of mixed ruminal bacteria (MRB) with the deamination rates of HAB and carbohydrate-fermenting ruminal bacteria, (2) develop a mathematical model of ammonia production by various classes of ammonia-producing ruminal bacteria, and (3) estimate 0168-6496 / 00 / $20.00 Published by Elsevier Science B.V. All rights reserved. PII: S 0 1 6 8 - 6 4 9 6 ( 0 0 ) 0 0 0 2 1 - 0 FEMSEC 1122 10-5-00 122 J.L. Rychlik, J.B. Russell / FEMS Microbiology Ecology 32 (2000) 121^128 the numbers of HAB in the rumen of cattle fed hay or grain-based diets. 2. Materials and methods 2.1. Basal medium Ruminal bacteria were grown anaerobically at 39³C in a basal medium containing (per liter) : 292 mg K2 HPO4 3H2 O, 240 mg KH2 PO4 , 480 mg (NH4 )SO4 , 480 mg NaCl, 100 MgSO4 7H2 O, 64 mg CaCl2 2H2 O, 0.5 Yeast Extract (Difco Laboratories, Detroit, MI, USA), 0.6 g cysteine, 1.0 g Trypticase (BBL Microbiology Systems, Cockeysville, MD, USA), 0.5 g yeast extract, 4 g Na2 CO3 , and fatty acids [12]. Previously isolated ruminal HAB were grown anaerobically in medium containing (per liter): 292 mg K2 HPO4 3H2 O, 240 mg KH2 PO4 , 480 mg Na2 SO4 , 480 mg NaCl, 100 MgSO4 7H2 O, 64 mg CaCl2 2H2 O, 0.6 g cysteine, 4 g Na2 CO3 , vitamins and minerals [12]. P. anaerobius C was grown in medium containing 7.5 mg ml31 each of Casamino acids and Trypticase, C. sticklandii SR was grown on 15 mg ml31 Trypticase, and C. aminophilum F was grown on 15 mg ml31 Casamino acids. b b b b b b 2.2. Isolation of carbohydrate fermenting bacteria Samples of digest were obtained from two 600-kg ruminally ¢stulated cows that were fed either 100% timothy hay (14% crude protein, 40% neutral detergent ¢ber) or 90% grain mixture (89% rolled corn and 11% soybean meal) and 10% hay. The cows were on the diets for 4 weeks prior to sampling. Ruminal contents were squeezed through four layers of cheesecloth, placed in Erlenmeyer £asks at 39³C and left undisturbed for 30 min. The feed particles, which were buoyed up by gas production, rose to the top of the £ask and protozoa settled on the bottom of the £ask. MRB from the center of the £ask were serially diluted and streaked onto basal medium plates containing (per liter) 1.7 g starch, 0.7 g cellobiose, 0.4 g sucrose, 0.5 g xylose, 0.5 g arabinose, and 0.2 g pectin and incubated in an anaerobic glove box (Coy Laboratory Products, Ann Arbor, MI, USA). Forty-¢ve colonies of di¡ering morphologies were isolated from each diet, checked microscopically for purity, and tested for the ability to produce ammonia. None of these isolates grew in basal medium when the carbohydrate was deleted. Washed cell suspensions of each isolate were incubated (39³C) with Trypticase in nitrogen free bu¡er (per liter): 292 mg K2 HPO4 3H2 O, 240 mg KH2 PO4 , 480 mg Na2 SO4 , 480 mg NaCl, 100 MgSO4 7H2 O, 64 mg CaCl2 2H2 O, 0.6 g cysteine, vitamins and minerals [12]) to determine rates of ammonia production. Ammonia production was determined by the colorimetric method of Chaney and Marbach [13]. The isolates fell into two groups: those that had a speci¢c activity less than 1 nmol NH3 mg protein31 min31 and those with speci¢c activities ranging from 2 ^100 nmol NH3 mg protein31 min31 . The speci¢c activity of the ¢rst group was so low that the kinetics of ammonia production could not be determined and these bacteria were designated as no activity, carbohydrate-fermenting bacteria with essentially no capacity to produce ammonia (CBNA). Based on their ability to produce small amounts of ammonia, the second group of bacteria were designated low activity, carbohydrate-fermenting bacteria with low rates of ammonia production (CB-LA). 2.3. Ammonia production and kinetics To determine the kinetics of ammonia production, cultures were centrifuged (4000Ug at 22³C), washed with nitrogen-free bu¡er, and incubated at 39³C in nitrogen free bu¡er with varying amounts of Trypticase. HAB were an equal part mix (based on optical density) of P. anaerobius C, C. sticklandii SR, C. aminophilum F. CB-LA consisted of four isolates with speci¢c activities ranging from 10 to 100 nmol NH3 mg protein31 min31 . MRB were spun at 1000Ug to remove feed particles and protozoa. The supernatants containing MRB were centrifuged (6000Ug at 22³C), and washed with nitrogen free bu¡er. The cell densities of MRB were typically 2.0 (1 cm cuvette, 600 nm, Gilford 260 spectrophotometer). Cultures were harvested by centrifugation (10 000Ug, 5³C, 10 min), washed and re-suspended in 0.9% NaCl. Protein of washed cells was measured by the method of Lowry et al. [14]. 2.4. Validation of the model To test the model, HAB were mixed with CB-LA and CB-NA. The HAB percentages were the average values that were predicted by the model. The ratio of CB-LA to CB-NA was 1 to 1. The total bacterial optical density was 1.0. Ammonia production was determined after 2 h of incubation at pH 7.0 with either 15 or 1.25 mg ml31 Trypticase. 2.5. Bacterial antagonisms HAB were incubated alone or with washed MRB from cattle fed hay or grain at pH 7.0. The optical density of HAB was 0.75 and optical density of the MRB was 2.0. Washed autoclaved MRB were used as a control. Ammonia production was determined after 2 h. b b 2.6. Statistics b All measurements were performed in duplicate and the experimental variation was generally less than 10%. When the coe¤cient of variation was greater than 10% and the FEMSEC 1122 10-5-00 J.L. Rychlik, J.B. Russell / FEMS Microbiology Ecology 32 (2000) 121^128 123 standard deviations were large, statistical signi¢cance was estimated by paired t-tests (P 6 0.05). 3. Results 3.1. Kinetics of MRB When washed cell suspensions of MRB from cattle fed hay were incubated in vitro with various concentrations of Trypticase (0^15 mg ml31 ) at pH 7.0, the initial rates of ammonia production were substrate-dependent and Lineweaver^Burk plots indicated that the maximal rate (Vmax ) and a¤nity constant (Km ) were 40 nmol NH3 mg protein31 min31 and 2.8 mg ml31 , respectively (Table 1). MRB from cows that were fed grain produced ammonia at a slower rate even though the in vitro pH was 7.0. The Vmax of MRB from cattle fed grain was only 20 nmol NH3 mg protein31 min31 , and the Km was 4.6 mg ml31 . 3.2. Kinetics of carbohydrate-fermenting ruminal bacteria When washed cell suspensions of each carbohydrate isolate were incubated with Trypticase to determine rates of ammonia production, the isolates fell into two groups: 1) those that had a speci¢c activity less than 1 nmol NH3 mg protein31 min31 (essentially no activity, CB-NA), and 2) those with speci¢c activities ranging from 10 to 100 nmol NH3 mg protein31 min31 CB-LA. The ammonia production of the CB-NA was so low that kinetics could not be determined, but a mixture of CB-LA isolates had Vmax and Km values of 34 nmol NH3 mg protein31 min31 and 9.3 mg ml31 , respectively (Table 1). 3.3. Kinetics of HAB When washed cell suspensions of HAB were incubated with Trypticase at pH 7.0, the optical density increased, and the ammonia production was so rapid that it was possible to estimate initial rates after only 2 h. Lineweaver^Burk plots demonstrated that the HAB had a Table 1 Michaelis constants of ammonia production by various groups of ruminal bacteria Bacteriaa Dietb MRB MRB HAB CB-LA Hay 40 þ 2 Grain 20 þ 3 500 þ 13 34 þ 2 a Vmax c Km d 2.8 þ 0.3 4.6 þ 0.4 7.0 þ 0.5 9.3 þ 0.3 Km Vmax 31 e 0.069 0.23 0.014 0.27 Bacteria are de¢ned as MRB, HAB, and CB-LA. b Diet consisted of either 100% hay or 90% grain and 10% hay. c Vmax of ammonia production (nmol NH3 mg protein31 min31 ). d Substrate a¤nity (Km ) for Trypticase (mg ml31 ) as measured by ammonia production. e Ratio of Km to Vmax ((nmol NH3 mg protein31 min31 ) (mg ml31 )31 ). Fig. 1. Predicted numbers of HAB at varying Trypticase concentrations for cattle fed either hay (light shading) or grain (dark shading) when the Trypticase concentration was varied from 0 to 15 mg ml31 . Ranges were estimated from the kinetic model of ammonia production (see text). high Vmax (500 nmol NH3 mg protein31 min31 ), but the Km was high (7.0 mg ml31 ) (Table 1). 3.4. Kinetic model of ammonia-production The kinetic model of ammonia production was constructed using four assumptions. The ¢rst assumption was that the rumen micro£ora could be divided into three bacterial groups according to their ability to produce ammonia from amino nitrogen sources. MRB were de¢ned as comprising of CB-NA, CB-LA and HAB bacteria. The second assumption was that ammonia £ux through the total population was equal to the sum of ammonia £uxes (nmol NH3 l31 min31 ) through all three bacterial groups (£uxCBÿNA +£uxCBÿLA +£uxHAB = £uxMRB ). The third assumption was that the £ux of ammonia (nmol l31 min31 ) through a bacterium, bacterial group or the total population was equal to the product of bacterial mass (mg protein l31 ) and speci¢c activity (nmol NH3 mg protein31 min31 ). The fourth assumption of the model was that the sum of the CB-NA, CB-LA and HAB had to be equivalent to the mass of MRB (massCBÿNA +massCBÿLA +massHAB = massMRB ) expressed as either mg protein l31 or percent of the total. 3.5. Estimation of HAB Unique solutions were confounded by the fact that the model had three unknowns (mass of CB-NA, CB-LA and HAB) and only two equations that could be solved ( massCBÿNA + massCBÿLA + massHAB = massMRB ) FEMSEC 1122 10-5-00 124 J.L. Rychlik, J.B. Russell / FEMS Microbiology Ecology 32 (2000) 121^128 and (massCBÿNA U SACBÿNA ) + (massCBÿLA U SACBÿLA ) + (massHAB USAHAB ) = (massMRB USAMRB ). However, it was possible to set mathematical limits for each equation and to de¢ne general trends for HAB. The maximal ammonia £ux of MRB from cattle fed hay was so high that CB-LA could never explain all of the ammonia production, and the HAB were always needed. Because HAB had an ammonia £ux that was so much greater than the £ux of the MRB, HAB could never account for a majority of the MRB. The Vmax of MRB from cattle fed grain was only 20 nmol NH3 mg protein31 min31 , CB-LA could explain all of the ammonia production, and the HAB were not essential. However, if CB-NA were present, the activity of the CB-LA was not su¤cient, and the HAB were still needed. By using the Michaelis constants to predict total ammonia £ux at di¡erent Trypticase concentrations, it was possible to assess the impact of amino N availability on the numbers of HAB in cattle fed either hay or grain. When only hay was fed, the MRB had a lower Km Vmax 31 than CB-LA (Table 1), and the CB-LA alone could not account for ammonia £ux at low Trypticase concentrations, and HAB accounted for as much as 17% of the population (Fig. 1). When the Trypticase concentration was increased, the contribution of Km to ammonia £ux diminished, CBLA could account for a larger fraction of the ammonia production, and the numbers of HAB declined. The MRB from cattle fed grain had a higher Km Vmax 31 (Table 1) than MRB from cattle fed hay, and CB-LA could explain more of the ammonia production at low Trypticase concentrations ; therefore, HAB constituted never more than 6% of the population (Fig. 1). Again, HAB declined when Fig. 3. The e¡ect theoretical variations in Vmax (a) and Km (b) on the predicted numbers of HAB for cattle fed either hay (light shading) or grain (dark shading). The Trypticase concentration was set at 1.25 mg ml31 . Vmax in mmol NH3 mg protein31 min31 and Km is mg ml31 . the Trypticase increased, but the decrease was not as dramatic as the decline observed with the HAB from cattle fed hay. An increase in CB-NA (relative to CB-LA) increased the need for HAB, but this e¡ect was relatively small ( 6 3% e¡ect on HAB) regardless of diet (data not shown). 3.6. Contribution of HAB to total ammonia production Fig. 2. Predicted minimum values of HAB for cattle fed either hay (solid line) or grain (dotted) when the when the Trypticase concentration was varied from 0 to 15 mg ml31 . Values were estimated from the kinetic model of ammonia production (see text). By using the estimates of percent HAB, it was possible to estimate the minimum contribution of HAB to the total ammonia production. This analysis was based on FEMSEC 1122 10-5-00 J.L. Rychlik, J.B. Russell / FEMS Microbiology Ecology 32 (2000) 121^128 125 a comparison of the kinetics of ammonia production by MRB and the predicted percentage of HAB at various concentrations of Trypticase [S], vMRB = (Vmax MRB US)6 (Km MRB +S)) and (vHAB = (Vmax HAB US)6(Km HAB +S)U HAB (%), respectively where vMRB and vHAB are the velocities at di¡erent substrate concentrations. Results indicated that HAB would account for at least 40% of the ammonia £ux in cattle fed hay but as little as 0% of the ammonia £ux in cattle fed grain (Fig. 2). 3.7. Vmax and Km sensitivity analyses When the Vmax of HAB was varied, there was an inverse relationship between Vmax and the percentage of HAB, but the greatest change was observed at Vmax values less than 500 nmol NH3 mg protein31 min31 (Fig. 3a). Increasing Vmax from 500 to 1000 had little impact on the predicted HAB value for either diet. Theoretical changes in Km had a smaller impact on the percent of HAB than Vmax , and the response was linear (Fig. 3b). Changes in Vmax and Km did not contradict the idea that cattle fed hay should have more HAB than cattle fed grain. 3.8. Experimental validation The model was then validated at high (15 mg ml31 ) and low (1.2 mg ml31 ) concentrations of Trypticase to see if the predicted percentages of HAB gave ammonia £uxes Fig. 5. The e¡ect of washed MRB from cattle fed grain or hay on the speci¢c activity of HAB. The e¡ect of autoclaved MRB is also shown. The ammonia production of MRB incubated without HAB was subtracted to determine the speci¢c activity HAB in co-culture. that were similar to the respective MRB. Because the ratio of CB-NA to CB-LA had little impact on the prediction of HAB% (data not shown), the ratio of CB-NA to CB-LA was always set at 1.0. De¢ned mixed cultures that were intended to mimic MRB from cattle fed either grain or hay produced more ammonia than actual MRB, but the over-prediction was greater for MRB from cattle fed grain (Fig. 4). 3.9. Bacterial antagonism Fig. 4. The speci¢c activity of de¢ned mixed cultures of ruminal bacteria (predicted by the kinetic model) versus corresponding MRB. De¢ned mixed cultures that mimicked MRB from cattle fed hay are shown by squares and those that mimicked cattle-fed grain are shown as circles. Open symbols are 1.25 mg ml31 Trypticase and closed symbols are 15 mg ml31 Trypticase. HAB that were incubated for 2 h with a high concentration of Trypticase (15 mg ml31 ) at pH 7.0 had a speci¢c activity of approximately 500 nmol NH3 mg protein31 min31 (Fig. 5). If HAB were mixed with washed MRB cells from cattle fed grain at pH 7.0, and the speci¢c activity of MRB was subtracted, the HAB had a speci¢c activity of only 280 nmol NH3 mg protein31 min31 . If the MRB from cattle fed grain were autoclaved prior to the incubation, the inhibition was no longer observed. Washed MRB from cattle fed hay had little impact on HAB. 4. Discussion Protein catabolism by ruminal bacteria is a multi-step FEMSEC 1122 10-5-00 126 J.L. Rychlik, J.B. Russell / FEMS Microbiology Ecology 32 (2000) 121^128 process that employs proteinases, peptidases, amino nitrogen transport systems, and deaminases. Only a few species of ruminal bacteria are actively proteolytic [15^18], but soluble proteins are degraded at a rapid rate by MRB [19]. Based on the observation that a variety proteinase inhibitors decreased the proteolytic activity of MRB, it appears that ruminal bacteria have a wide variety of proteinases [20]. Peptides arising from proteolysis can be utilized by ruminal bacteria [21,22], but peptides are also degraded extracellularly by peptidases [23]. Wallace and McKain [24] concluded that dipeptidyl peptidase activity from Prevotella (Bacteroides) ruminicola was the most important peptidase in ruminal £uid, but it should be noted that a variety of ruminal bacteria have peptidase activities. Within the rumen, the pool of non-ammonia, non-protein nitrogen (peptides and amino acids) ranges from approximately 0.2 mg ml31 (before feeding) to approximately 1.2 mg ml31 (soon after feeding), and HCl hydrolysis indicated that the average peptide size ranged from nine amino acids (before feeding) to three amino acids (soon after feeding) [25,26]. Casein is a non-glycolsylated protein that has been used as a model for protein degradation in the rumen [1,27], but kinetic studies with MRB and casein hydrolysate (Trypticase) indicated that the Km of Trypticase was relatively high [28]. Trypticase is a heterogeneous substrate. Many of the peptides from Trypticase are readily utilized, but some are degraded so slowly that they can pass undegraded from the rumen [27]. Fractionations [28] and studies with synthetic peptides [29] indicated that the slowly degraded pool has an abundance of proline containing peptides. In the 1930s Stickland noted that clostridia deaminated oxidized and reduced amino acids in coupled reactions [30], but there has been little indication that Stickland reactions are important in ruminal bacteria [31]. Within the rumen, methanogenesis is an alternative mechanism of reducing equivalent disposal, but methane inhibition had relatively little impact on the production of ammonia from protein hydrolysate [31]. Bladen et al. [8] concluded that P. ruminicola was probably the most important ammonia-producing ruminal bacterium, but even the best strain (B1 4) produced ammonia at a relatively slow rate. When carbohydrates were available, virtually all of the amino nitrogen was incorporated into microbial protein and the deamination rate was even slower [32]. Carbohydrate-fermenting ruminal bacteria did not have deamination rates that could explain the ability of MRB to produce ammonia ; however, HAB have been shown to generate ammonia 20-fold faster [33,34]. The enumeration of HAB has been confounded by the observation that some HAB did not grow well in the laboratory [9]. Recent work indicated that MRB from cattle fed grain produced ammonia 50% slower than MRB from cattle fed hay, but HAB were not enumerated [35]. Some HAB are relatively sensitive to low pH and the ruminal pH of cattle fed grain can be lower than cattle fed hay. However, MRB from cattle fed grain still produced ammonia 50% slower than MRB from cattle fed grain even if the in vitro pH was near neutral, and this result indicated that grain-fed cattle might have fewer HAB [35]. HAB have a much higher Vmax than other ruminal bacteria, but Km values for HAB had not been measured. The mathematical model of ammonia production in the rumen indicated that grain-fed cattle would have very low numbers of HAB, particularly at high concentrations of Trypticase, but HAB appeared to play a more signi¢cant role in hay-fed cattle. Because the HAB had a relatively high Vmax , we had originally thought that they might be more important at high concentrations of Trypticase, but the model indicated the reverse. The increase in HAB at low Trypticase concentrations could be explained by the observation that HAB had a lower Km than CB-LA. MRB had a lower Km than either HAB or CB-LA, but ammonia production is a function of Vmax as well as Km . MRB had a Km Vmax 31 that falls between CB-LA and HAB, and Km Vmax 31 is the index of relative £ux. Because CB-NA had virtually no capacity to produce ammonia, we had initially believed that an increase in CB-NA and a decrease in CBLA would have a large impact on the relative numbers of HAB. However, the model indicated the ratio of CB-NA to CB-LA had little e¡ect. By using data generated by the kinetic model, it was possible to estimate the relative contribution of HAB to total ammonia production. These calculations indicated that HAB produced at least 40% of the ammonia in cattle fed hay, but contribution of HAB in cattle fed grain was at least four-fold lower. The ability of HAB to grow in the rumen is constrained by their ability to derive ATP from amino acid fermentation [36]. P. anaerobius [37] had a yield of approximately 8 mg protein mmol NH31 3 , but the yields of C. sticklandii and C. aminophilum were nearly 3-fold lower [33]. The question then arose, would there be enough substrate for HAB to achieve high numbers in the rumen? If a cow consumed 1.5 kg day31 , the nitrogen content of the protein was 16%, the ruminal volume was 70 l, and 80% of the protein was degraded to ammonia, total ammonia £ux would be 200 mmol l31 . If HAB had a yield of 8 mg protein mmol NH31 3 and they consumed 40% of the amino acid nitrogen (cattle fed hay), the mass of HAB in the rumen would be 640 mg protein l31 . If the total bacteria protein in the rumen was 4000 mg protein l31 [38], HAB could account for 16% of the MRB. If HAB only produced 10% of the ammonia (cattle fed grain), then HAB would account for only 4% of the MRB. Both of these estimates are within the range predicted by the mathematical model (Fig. 1). The model was based on a mixture of HAB previously isolated in our laboratory (P. anaerobius C, C. sticklandii SR, C. aminophilum F) [33,34], but Attwood et al. recently isolated HAB with even higher speci¢c activities of ammonia production (as high as 950 nmol mg protein31 min31 ) [11]. When the Vmax of the model was varied, the predicted FEMSEC 1122 10-5-00 J.L. Rychlik, J.B. Russell / FEMS Microbiology Ecology 32 (2000) 121^128 numbers of HAB changed, but this trend was most apparent at low Vmax values. If the Vmax was increased from 500 to 1000 nmol mg protein31 min31 , the predicted HAB for cattle fed hay only decreased from 18 to 12%. For cattle fed grain, the change was even less. HAB had a relatively high Km , but changes in Km had even less e¡ect on the predicted number of HAB than changes in Vmax . Previous work indicated that some HAB were de¢cient in peptidase activity [33,37], but model validations with predicted ratios of HAB, CB-LA and CB-NA indicated that the model tended to over-predict ammonia production. If peptidase activity was restricting HAB, one would have expected lower (not higher) ammonia production rates. The model indicated that cattle fed grain would have fewer HAB than cattle fed hay, but the mechanism of this e¡ect was not initially apparent. Co-culture experiments with HAB that washed MRB from cattle fed grain were able to decrease ammonia production from HAB, but MRB from cattle fed hay did not a¡ect HAB. Further research is needed to de¢ne the antagonism between MRB from cattle fed grain and HAB, but it should be noted that autoclaved MRB did not cause an inhibition and the incubations were always carried out at pH 7.0. This latter observation indicates that that e¡ect on HAB was not simply a chemical inhibition (e.g. low pH). Some ruminal bacteria produce bacteriocins [39] and many bacteriocins are inactivated by heat [40]. Another possibility are ruminal bacteriophages. The rumen has a relatively high concentration phage particles [41], but the e¡ect of MRB on HAB was transitory. If HAB and MRB from cattle fed grain were transferred successively in basal medium with Trypticase, the MRB died out, but the HAB persisted. Acknowledgements J.B.R. is a member of the U.S. Dairy Forage Research Center, Madison, WI. References [1] Nolan, J.V. (l975) Quantitative models of nitrogen metabolism in sheep. In: Digestion and Metabolism in the Ruminant (MacDonald, I.W., Warner, A.C.I., Eds.), pp. 416^431. Univ. New England Publishing Unit, Arimdale. [2] Annison, E.F. (1956) Nitrogen metabolism in the sheep. Biochem. J. 64, 705^714. [3] Russelle, M.R. (1996) Pasture nitrogen £ow. In: Informational Conference with Dairy and Forage Industries. pp. 73^80. U.S. Dairy Forage Research Center. [4] Ferguson, K.A. (1975) The protection of dietary proteins and amino acids against microbial fermentation in the rumen. In: Digestion and Metabolism in the Ruminant (MacDonald, I.W., Warner, A.C.I., Eds.), pp. 448^464. Univ. New England Publishing Unit, Arimdale. [5] Slyter, L.L. (1976) In£uence of acidosis on rumen function. J. Anim. Sci. 43, 910^929. 127 [6] Yang, C.M.J. and Russell, J.B. (1993) The e¡ect monensin supplementation on ruminal ammonia accumulation in vivo and the numbers of amino-acid fermenting bacteria. J. Anim. Sci. 71, 3470^ 3476. [7] Lana, R.P. and Russell, J.B. (1997) E¡ect of forage quality and monensin on the ruminal fermentation of ¢stulated cows fed continuously at a constant intake. J. Anim. Sci. 75, 224^229. [8] Bladen, H.A., Bryant, M.P. and Doetsch, R.N. (1961) A study of bacterial species from the rumen which produce ammonia from protein hydrolyzate. Appl. Microbiol. 9, 175^180. [9] Paster, B., Russell, J.B., Yang, C.M.J., Chow, J.M., Woese, C.R. and Tanner, R. (1993) Phylogeny of ammonia-producing ruminal bacteria, Peptostreptococcus anaerobius, Clostridium sticklandii and Clostridium aminophilum sp. nov.. Int. J. Syst. Bacteriol. 43, 107^110. [10] Krause, D.O. and Russell, J.B. (1996) An rRNA approach for assessing the role of obligate amino acid-fermenting bacteria in ruminal amino acid degradation. Appl. Environ. I 62, 815^821. [11] Attwood, G.T., Klieve, A.V., Ouwerkerkand, D. and Patel, B.K. (1998) Ammonia-hyperproducing bacteria from New Zealand ruminants. Appl. Environ. Microbiol. 64, 1794^1804. [12] Russell, J.B., Sni¡en, C.J. and Van Soest, P.J. (1983) E¡ect of carbohydrate limitation on degradation and utilization of casein by mixed rumen bacteria. J. Dairy Sci. 66, 763^775. [13] Chaney, A.L. and Marbach, E.P. (1962) Modi¢ed reagents for determination of urea and ammonia. Clin. Chem. 8, 130^132. [14] Lowry, O.H., Rosebrough, N.J., Farr, A.L. and Randall, R.J. (1951) Protein measurement with the Folin phenol reagent. J. Biol. Chem. 193, 265^275. [15] Blackburn, T.H. and Hobson, P.N. (1960) Isolation of proteolytic bacteria from the sheep rumen. J. Gen. Microbiol. 22, 282^289. [16] Blackburn, T.H. (1968) The protease liberated from Bacteroides amylophilus strain H18 by mechanical disintegration. J. Gen. Microbiol. 53, 37^51. [17] Cotta, M. and Hespell, R. (1986) Proteolytic activity of the ruminal bacterium Butyrivibrio ¢brisolvens. Appl. Environ. Microbiol. 52, 51^ 58. [18] Russell, J.B., Bottje, W.G. and Cotta, M.A. (1981) Degradation of protein by mixed cultures of rumen bacteria : Identi¢cation of Streptococcus bovis as an actively proteolytic rumen bacterium. J. Anim. Sci. 53, 242^252. [19] Mahadevan, S., Er£e, J.D. and Sauer, F.D. (1980) Degradation of soluble and insoluble proteins by Bacteroides amylophilus protease and by rumen microorganisms. J. Anim. Sci. 50, 723^728. [20] Brock, F.M., Forsberg, C.W. and Buchanan-Smith, J.G. (1982) Proteolytic activity of rumen microorganisms and e¡ects of proteinase inhibitors. Appl. Environ. Microbiol. 44, 561^569. [21] Wright, D.E. (1967) Metabolism of peptides by rumen micro-organisms. Appl. Microbiol. 15, 547^550. [22] Wright, D.E. and Hungate, R.E. (1967) Amino acid concentrations in rumen £uid. Appl. Microbiol. 15, 148^151. [23] Wallace, R.J, Onodera, R. and Cotta, M.A. (1997) Metabolism of nitrogen-containing compounds. In: The Rumen Microbial Ecosystem (Hobson, P.N. and Stewart, C.S., Eds.), pp. 283^328. Blackie Academic and Professional, London. [24] Wallace, R.J. and McKain, N. (1991) A survey of peptidase activity in rumen bacteria. J. Gen. Microbiol. 137, 2259^2264. [25] Chen, G., Russell, J.B. and Sni¡en, C.J. (1987) A procedure for measuring peptides in rumen £uid and data suggesting that peptide uptake is the rate-limiting step in ruminal protein degradation. J. Dairy Sci. 70, 1211^1219. [26] Chen, G., Sni¡en, C.J. and Russell, J.B. (1987) Concentration and estimated £ow of peptides from the rumen of dairy cattle : E¡ects of protein quantity, protein solubility, and feeding frequency. J. Dairy Sci. 70, 983^992. [27] Mangan, J.L. (1972) Quantitative studies on nitrogen metabolism in the bovine rumen. Br. J. Nutr. 27, 261^283. [28] Chen, G., Strobel, H.J., Russell, J.B. and Sni¡en, C.J. (1987) The FEMSEC 1122 10-5-00 128 [29] [30] [31] [32] [33] [34] [35] J.L. Rychlik, J.B. Russell / FEMS Microbiology Ecology 32 (2000) 121^128 e¡ect of hydrophobicity on the uptake and deamination of peptides by ruminal bacteria in vitro. Appl. Environ. Microbiol. 53, 2021^ 2025. Yang, C.M.J. and Russell, J.B. (1992) The resistance of proline-containing peptides to ruminal degradation in vitro. Appl. Environ. Microbiol. 58, 3954^3958. Nisman, B. (1954) The Stickland reaction. Bacteriol. Rev. 18, 16^42. Hino, T. and Russell, J.B. (1985) The e¡ect of reducing equivalent disposal and NADH/NAD on the deamination of amino acids by intact and cell-free extracts of rumen microorganisms. Appl. Environ. Microbiol. 50, 1368^1374. Russell, J.B. (1983) Fermentation of peptides by Bacteroides ruminicola B1 4. Appl. Environ. Microbiol. 45, 1566^1574. Chen, G. and Russell, J.B. (1989) More monensin-sensitive, ammonia producing bacteria from the rumen. Appl. Environ. Microbiol. 55, 1052^1057. Russell, J.B., Strobel, H.J. and Chen, G. (1988) The enrichment and isolation of a ruminal bacterium with a very high speci¢c activity of ammonia production. Appl. Environ. Microbiol. 54, 872^877. Lana, R.P., Russell, J.B. and Amburgh, M.E.V. (1998) The role of [36] [37] [38] [39] [40] [41] pH in regulating ruminal methane and ammonia production. J. Anim. Sci. 76, 2190^2196. Russell, J.B., Onodera, R., and Hino, T. (1991) Ruminal protein fermentation: new perspectives on previous contradictions. In: Physiological Aspects of Digestion and Metabolism in Ruminants, Proceedings of the Seventh International Symposium on Ruminant Physiology (Tsuda, T., Sasaki, Y., and Kawashima, R., Eds.), pp. 681^ 700. Academic Press, San Diego, CA. Chen, G. and Russell, J.B. (1988) Fermentation of peptides and amino acids by a monensin-senstive ruminal peptostreptococcus. Appl. Environ. Microbiol. 54, 2742^2749. Czerkawski, J.W. (1986) Rumen Studies, 1st edn., 236 pp. Pergamon Press, Oxford. Kalmoko¡, M.L., Bartlett, F. and Teather, R.M. (1996) Are ruminal bacteria armed with bacteriocins ? J. Dairy Sci. 79, 2297^2308. Jack, R.W., Tagg, J.R. and Ray, B. (1995) Bacteriocins of Grampositive bacteria. Microbiol. Rev. 59, 171^200. Klieve, A.V. and Swain, R.A. (1993) Estimation of ruminal bacteriophage numbers by pulsed-¢eld gel electrophoresis and laser densitometry. Appl. Environ. Microbiol. 59, 2299^2303. FEMSEC 1122 10-5-00
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